BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003745
(798 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1
Length = 795
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 188/416 (45%), Gaps = 93/416 (22%)
Query: 29 ANLRGVKWRINLGILPSS----YSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNS 84
+ R + W++ L +LP S IE+LR Y+ I+ + +P +
Sbjct: 84 SRFRSICWKLFLCVLPQDKSQWISRIEELRAW-------YSNIKEIHITNP---RKVVGQ 133
Query: 85 PDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLL 144
DL+++NPLSQ+ S W +FF+ EL M++QD+ R +PE +FQ + +L +L
Sbjct: 134 QDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEM-QFFQQENVRKILTDVLFC 192
Query: 145 WCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYN 204
+ + + Y+QGMHELLAP+++VLH
Sbjct: 193 YARENEQLLYKQGMHELLAPIVFVLHC--------------------------------- 219
Query: 205 FDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKF--M 262
D + FL + E S S ++++V L+PE DAY +L F
Sbjct: 220 -DHQAFLHASE----SAQPSEEMKTV--LNPEYLE----HDAYAVFSQLMETAEPWFSTF 268
Query: 263 EHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHS 322
EHD + LM FA G + V + + HLL D L+
Sbjct: 269 EHDGQKGKETLMTPIP--------FARPQDLGPTIAI--VTKVNQIQDHLLKKHDIELYM 318
Query: 323 HLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGIL 382
HL L + PQ +GLRW+R+LFGREF L DLL++WD +FA G G
Sbjct: 319 HLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFAD-------------GLSLG-- 363
Query: 383 SSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKSLQ 438
L+ + V+M+LYIR +L+++ N TCL L+++P ++ +I K L+
Sbjct: 364 ------LVDYIFVAMLLYIRDALISS-NYQTCLGLLMHYPFIGDVHSLILKALFLR 412
>sp|Q80XQ2|TBCD5_MOUSE TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2
Length = 815
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 190/413 (46%), Gaps = 87/413 (21%)
Query: 29 ANLRGVKWRINLGILPSSYSS-IEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDL 87
+ R + W++ L +LP S I ++ + R Y+ I+ + +P + + DL
Sbjct: 84 SRFRSICWKLFLCVLPQDKSQWISKIKEL----RAWYSSIKEIHITNP---RKAAGQQDL 136
Query: 88 VMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCL 147
+++NPLSQ+ S W +FF+ EL M++QD+ R +PE +FQ + +L +L +
Sbjct: 137 MINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEM-QFFQQENVRKILTDVLFCYAR 195
Query: 148 RHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDF 207
+ + Y+QGMHELLAP+++ LH D
Sbjct: 196 ENEQLLYKQGMHELLAPIIFTLHC----------------------------------DH 221
Query: 208 KKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKF--MEHD 265
+ FL + E S S +++++ L+PE DAY +L F EHD
Sbjct: 222 QAFLHASE----SAQPSEEMKTL--LNPEYLE----HDAYAMFSQLMETAEPWFSTFEHD 271
Query: 266 AYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLV 325
+ LM FA G + V + + HLL D L+ HL
Sbjct: 272 GQKGKETLMAPIP--------FARPQDLGPTVAI--VTKVNQIQDHLLKKHDIELYMHLN 321
Query: 326 ELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSP 385
L + PQ +GLRW+R+LFGREF L DLL++WD +FA DS +
Sbjct: 322 RLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFA-DSLNL------------------ 362
Query: 386 RGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKSLQ 438
+L+ + +M+LYIR +L+++ N TCL L+++P+ ++ +I K L+
Sbjct: 363 --SLVDYVFTAMLLYIRDALISS-NYQTCLGLLMHYPIIGDIHSLILKALFLR 412
>sp|Q54VM3|TBC5A_DICDI TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum
GN=tbc1d5A PE=1 SV=1
Length = 1173
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 208/464 (44%), Gaps = 87/464 (18%)
Query: 31 LRGVKWRINLGIL---PSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKD------- 80
+R + WRI LG L P+++ + R T SR++Y +++ +++P KD
Sbjct: 379 VRSIFWRIALGTLSKDPTTW-----VER-TNSSRKKYETFKKNYIINPRNSKDQDADLQQ 432
Query: 81 -------GSNSPDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPG 133
P ++D+PLSQ+ DS W +FF + ++ + D+SR YP G +F+
Sbjct: 433 QQQQQQQQQRKPVSLIDDPLSQSEDSLWNQFFDNENAQREISHDISRTYPGLG-FFERLD 491
Query: 134 CQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTDK-FD 192
Q ++ RIL ++ ++P+ Y QGM+E+LAP+LY ++ D + + D F+ K +D
Sbjct: 492 IQDIMIRILFIFSKQYPKIKYLQGMNEILAPILYSVYNDSHWFN-----NRDVFSKKNYD 546
Query: 193 GLSFHENDLTYNFDFKKFLDSMED---EIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGA 249
+ + FD + D D + ++ N+ +
Sbjct: 547 KKNKQYEHFDFVFDQQYQQDYYPDGPIQYPTNSNNFNGAG---------SSGSGGSVSRK 597
Query: 250 EGELGIVLSE-KFMEHDAYCMFDALM--VGSQGSVSMADFFAHSHADGSLTCL------- 299
+G +G L + ++ EHD+Y +F++LM VG + + G L
Sbjct: 598 DGGIGAFLRDPQYFEHDSYFIFESLMTIVGKWFTSPPSSPQPPPRVQGQFKKLYDLSERD 657
Query: 300 -------LPVIEASSAMYHLLSVADSSLHSHLVE-LGVEPQYFGLRWLRVLFGREFSLGD 351
+ V++ M+ L + L+S+L + LG+EP + LRW+R++ + F L
Sbjct: 658 ASDQAVNIVVVDQCLRMFEDLKFIEPQLYSYLKQDLGIEPHLYSLRWIRIILAQVFPLDS 717
Query: 352 LLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENA 411
LLI+WD IF ++ + + ++M++ I+ ++ ++
Sbjct: 718 LLILWDSIFKESVTE----------------------FLPYICLTMLIMIKDQIIE-KDY 754
Query: 412 TTCLQRLLNFPVNINLKKIIGKTKS----LQALALDANLSSSSP 451
+ CLQ L ++PV ++ ++ S +Q N+ S+P
Sbjct: 755 SECLQVLFHYPVTQDMPMLLNTAYSVREKIQMAKQQYNIPISTP 798
>sp|Q54TA5|TBC5B_DICDI TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum
GN=tbc1d5B PE=3 SV=1
Length = 1016
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 31 LRGVKWRINLGILPSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMD 90
LRG+ W++ LG L + ++ R R+RY +++ DP SNS
Sbjct: 285 LRGIAWKLFLGGL--DINRVDKWERDITQQRKRYEKLKEEHCFDPR----NSNS----TY 334
Query: 91 NPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHP 150
+PLSQN DS W +FF++ + +K++ DL R +P++ +F P + M+ IL ++ +
Sbjct: 335 DPLSQNDDSPWNKFFKNLDTQKIIKIDLERTHPDND-FFSNPVIREMMATILFVYSKTNG 393
Query: 151 EFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHEND 200
YRQGMHELLAP++Y+ + + ++ D + + E+D
Sbjct: 394 IISYRQGMHELLAPIIYLYNQEYSSYKKLDENSSSTLVDFIYNIKYLEHD 443
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 312 LLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDT 371
LL D L+ HL L +EPQ + LRW+R+LFGREF D+L IWD +FA + +
Sbjct: 585 LLKQKDFELYQHLDSLDIEPQIYLLRWIRLLFGREFHFDDVLNIWDALFAYGENLI---- 640
Query: 372 EDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 422
LI +SM+ YIR LL ++ + L+R+ +P
Sbjct: 641 -----------------LIDYFCISMLTYIREHLLKSD-SIYALKRIYKYP 673
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 309 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVN 368
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 291 VYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN---- 346
Query: 369 KDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLL-NFPVNINL 427
R + + +M++ IR LL E T RLL ++P+ ++
Sbjct: 347 -----------------RFDFLLLVCCAMLMLIREQLL--EGDFTVNMRLLQDYPIT-DV 386
Query: 428 KKIIGKTKSLQ 438
+I+ K K LQ
Sbjct: 387 CQILQKAKELQ 397
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 31 LRGVKWRINLGILP---SSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKD--GSNSP 85
LR + W+I L LP +S++SI A R YA+ R +++ P K G +
Sbjct: 40 LRCLCWKILLNYLPLERASWTSI------LAKQRELYAQFLREMIIQPGIAKANMGVSRE 93
Query: 86 DLVM-DNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQ 130
D+ D+PL+ NPDS W +F+ E+ +D+D+ RL P+ S+FQ
Sbjct: 94 DVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPD-ISFFQ 138
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 133 GCQG---MLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTD 189
GC+ ++ RIL ++ +P Y QGM+E++ PL Y D + E + F
Sbjct: 203 GCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFC- 261
Query: 190 KFDGLSFHENDLTYNFDFKKFLDSMED-EIGSHGNSVKVRSVDELDPEIQTIVQLSD--- 245
F L D F+ S++D + G KV S + D +++ ++L +
Sbjct: 262 -FTNLMAEIRD--------NFIKSLDDSQCGITYKMEKVYSTLK-DKDVELYLKLQEQNI 311
Query: 246 --AYGAEGELGIVLSEKFMEHDAYCMFDALM 274
+ A L ++LS++F+ D ++D+L
Sbjct: 312 KPQFFAFRWLTLLLSQEFLLPDVIRIWDSLF 342
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 309 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVN 368
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA
Sbjct: 291 VYSTLKDKDVELYLKLQEQSIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFAD------ 344
Query: 369 KDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLL-NFPVNINL 427
G+ F L + +M++ IR LL E T RLL ++P+ ++
Sbjct: 345 -------GNRFDFL--------LLVCCAMLILIREQLL--EGDFTVNMRLLQDYPIT-DV 386
Query: 428 KKIIGKTKSLQ 438
+I+ K K LQ
Sbjct: 387 CQILQKAKELQ 397
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 31 LRGVKWRINLGILP---SSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKD--GSNSP 85
LR + W+I L LP +S++SI A R Y++ R +++ P K G
Sbjct: 40 LRCLCWKILLNYLPLERASWTSI------LAKQRGLYSQFLREMIIQPGIAKANMGVFRE 93
Query: 86 DLVM-DNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQ 130
D+ D+PL+ NPDS W +F+ E+ +D+D+ RL P+ S+FQ
Sbjct: 94 DVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDI-SFFQ 138
Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 133 GCQG---MLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTD 189
GC+ ++ RIL ++ +P Y QGM+E++ PL Y D + E + F
Sbjct: 203 GCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFC- 261
Query: 190 KFDGLSFHENDLTYNFDFKKFLDSMED-EIGSHGNSVKVRSVDELDPEIQTIVQLSD--- 245
F L D F+ S++D + G KV S + D +++ ++L +
Sbjct: 262 -FTNLMAEIRD--------NFIKSLDDSQCGITYKMEKVYSTLK-DKDVELYLKLQEQSI 311
Query: 246 --AYGAEGELGIVLSEKFMEHDAYCMFDALM 274
+ A L ++LS++F+ D ++D+L
Sbjct: 312 KPQFFAFRWLTLLLSQEFLLPDVIRIWDSLF 342
>sp|Q9URY3|YLOH_SCHPO TBC domain-containing protein C1952.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1952.17c PE=4
SV=4
Length = 619
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 22/191 (11%)
Query: 255 IVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHS---HADGSLTCLLPVIEASSAMYH 311
++ ++ E+ C DA + +Q V + D + + +D + L+ S
Sbjct: 282 VLATDPTYENYYLCECDAFFLFTQMMVQVRDLYEKTLDHDSDHGIHFLM------SKFTE 335
Query: 312 LLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDT 371
L D L +L E + P Y+ RW L +EF L D++ +WD I A D K
Sbjct: 336 RLKKYDYELWENLEEKQIHPTYYSFRWFTCLLSQEFPLPDVIRLWDSIIA-DQMKARLFG 394
Query: 372 EDDAGSGFGILSSPRGA--LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKK 429
++D G GA + S+++ +R S+L A + +LL N+++ K
Sbjct: 395 KNDDGFN--------GAYDFLMDFCCSILIELRESILERNFADSI--KLLQAHFNVDMPK 444
Query: 430 IIGKTKSLQAL 440
++ T LQ L
Sbjct: 445 LLNLTFELQHL 455
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 31 LRGVKWRINLGILPSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHK------DGSNS 84
LR W + L LP+ S + + V R+ Y + LL+DP W K G NS
Sbjct: 39 LRAKAWMLMLEFLPTDRS---NWQSVLEKHRKTYTSFVQELLIDP-WRKLTLHEESGENS 94
Query: 85 PDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQ 130
D+PL+ + DS W +F ++ + +D+D+ R P+ S+FQ
Sbjct: 95 -----DHPLNTSDDSKWKEYFDDNQILEQIDKDIRRTLPDL-SFFQ 134
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 140 RILLLWCLRHPEFGYRQGMHELLAPLLYVLHVD 172
RIL ++ +P GY QGM+E+LAPL YVL D
Sbjct: 254 RILFIYAKLNPGIGYVQGMNEILAPLYYVLATD 286
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 34/149 (22%)
Query: 32 RGVKWRINLGILPSSYSSIED-LRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMD 90
R V W++ +G LP + E L+R R+ Y + +H D H S D+
Sbjct: 286 RPVVWKLLIGYLPVNTKRQEGFLQR----KRKEYRDSLKHTFSDQH-------SRDI--- 331
Query: 91 NPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHP 150
TW + ++ D+ R P H +Q Q L+RIL LW +RHP
Sbjct: 332 --------PTWHQ----------IEIDIPRTNP-HIPLYQFKSVQNSLQRILYLWAIRHP 372
Query: 151 EFGYRQGMHELLAPLLYVLHVDVERLSQV 179
GY QG+++L+ P + SQ+
Sbjct: 373 ASGYVQGINDLVTPFFETFLTEYLPPSQI 401
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 302 VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 361
++ + L+ D+ L++H VE F RW+ L REF +G ++ +WD +
Sbjct: 447 ILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLS 506
Query: 362 SDSSKV 367
S +V
Sbjct: 507 ETSQEV 512
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 31/119 (26%)
Query: 129 FQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVL----------HVDVERLSQ 178
FQ P Q + RIL +W +RHP GY QG+++L+ P V + DV LSQ
Sbjct: 282 FQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQ 341
Query: 179 --VRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE--IGSHGNSVKVRSVDEL 233
+R+ D F + K LD ++D G KV++++EL
Sbjct: 342 DMLRSIEADSF-----------------WCMSKLLDGIQDNYTFAQPGIQKKVKALEEL 383
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
Query: 262 MEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEAS-SAMYHLLSVADSSL 320
+E D++ L+ G Q + + A P I+ A+ L+S D +
Sbjct: 347 IEADSFWCMSKLLDGIQDNYTFAQ---------------PGIQKKVKALEELVSRIDEQV 391
Query: 321 HSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWD 357
H+H VE F RW+ L RE L + +WD
Sbjct: 392 HNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWD 428
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 31/119 (26%)
Query: 129 FQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVL----------HVDVERLSQ 178
FQ P Q + RIL +W +RHP GY QG+++L+ P V + DV LSQ
Sbjct: 282 FQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQ 341
Query: 179 --VRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE--IGSHGNSVKVRSVDEL 233
+R+ D F + K LD ++D G KV++++EL
Sbjct: 342 DMLRSIEADSF-----------------WCMSKLLDGIQDNYTFAQPGIQKKVKALEEL 383
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
Query: 262 MEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEAS-SAMYHLLSVADSSL 320
+E D++ L+ G Q + + A P I+ A+ L+S D +
Sbjct: 347 IEADSFWCMSKLLDGIQDNYTFAQ---------------PGIQKKVKALEELVSRIDEQV 391
Query: 321 HSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWD 357
H+H VE F RW+ L RE L + +WD
Sbjct: 392 HNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWD 428
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 112 KMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHV 171
+ + D+ R+ PE + P + RIL +W +RHP GY QG+++L+ P V
Sbjct: 277 RQIHIDIPRMSPE--ALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFIC 334
Query: 172 DVERLSQVRNEHEDHFTDKFDGLSFHENDL------TYNFDFKKFLDSMEDE--IGSHGN 223
+ + ED DK D S L TY + K LD ++D G
Sbjct: 335 EY-------TDRED--VDKVDVSSVPAEVLRNIEADTY-WCMSKLLDGIQDNYTFAQPGI 384
Query: 224 SVKVRSVDEL 233
+KV+ ++EL
Sbjct: 385 QMKVKMLEEL 394
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 129 FQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVL 169
+Q P Q ML RIL +W RHP GY QG+ +L+ P + V
Sbjct: 290 YQNPLTQRMLERILYVWASRHPASGYVQGISDLVTPFIQVF 330
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 262 MEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLH 321
+E DAY L+ G Q D + H+ + + + L D L
Sbjct: 356 IEADAYWCLSKLLDGIQ------DNYIHAQPG--------IRRQVNNLRELTLRIDEPLV 401
Query: 322 SHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 361
HL GV+ F RW+ L RE S+ +++ +WD A
Sbjct: 402 KHLQMEGVDFLQFSFRWMNCLLMRELSISNIIRMWDTYMA 441
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 113 MVDQDLSRLYPEHGSY--FQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLH 170
++++D+SR + Y + PG G+L ILL +C+ H + GY QGM +LL+P+LYV+
Sbjct: 374 LIERDVSRTDRTNKFYEGPENPGL-GLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQ 432
Query: 171 VDVE 174
+V+
Sbjct: 433 NEVD 436
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 112 KMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVL-- 169
+ + D+ R+ PE + P + RIL +W +RHP GY QG+++L+ P V
Sbjct: 278 RQIHIDIPRMSPE--ALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFIC 335
Query: 170 -HVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE--IGSHGNSVK 226
+++ E + V D + L E D TY + K LD ++D G +K
Sbjct: 336 EYIEAEEVDTV-----DVSGVPAEVLCNIEAD-TY-WCMSKLLDGIQDNYTFAQPGIQMK 388
Query: 227 VRSVDEL 233
V+ ++EL
Sbjct: 389 VKMLEEL 395
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 112 KMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVL-- 169
+ + D+ R+ PE + P + RIL +W +RHP GY QG+++L+ P V
Sbjct: 258 RQIHIDIPRMSPE--ALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFIC 315
Query: 170 -HVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE--IGSHGNSVK 226
+++ E + V D + L E D TY + K LD ++D G +K
Sbjct: 316 EYIEAEEVDTV-----DVSGVPAEVLRNIEAD-TY-WCMSKLLDGIQDNYTFAQPGIQMK 368
Query: 227 VRSVDEL 233
V+ ++EL
Sbjct: 369 VKMLEEL 375
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 113 MVDQDLSRLYPEHGSYFQTPGCQGM--LRRILLLWCLRHPEFGYRQGMHELLAPLLYVLH 170
++++D+SR +++ P G+ L ILL +C+ H + GY QGM +LL+P+L+V+
Sbjct: 374 LIERDVSRT-DRTNKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQ 432
Query: 171 VDVE 174
+V+
Sbjct: 433 NEVD 436
>sp|P07751|SPTN1_CHICK Spectrin alpha chain, non-erythrocytic 1 OS=Gallus gallus GN=SPTAN1
PE=1 SV=3
Length = 2477
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 422 PVNINLKKIIGKTKSLQALALDANLSSSSPPFSGVYNQNNPMVVRGSSLPSESISPRTPL 481
P NI L K++ K + QA +A L +++ GV NP++ RG+ SE + + L
Sbjct: 1582 PTNIQLSKLLSKHQKHQAF--EAELHANADRIRGVIEMGNPLIERGACAGSED-AVKARL 1638
Query: 482 NVVPDSYWE 490
+ D WE
Sbjct: 1639 AALADQ-WE 1646
>sp|P38676|GUX1B_NEUCR Exoglucanase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=cbh-1 PE=3 SV=1
Length = 516
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 695 SGKFQWFWKFGRNSAGEETSEKGGVATETKISANNESNQSNSKGASSNDGSCKSSSSSKG 754
S KF +F ++SAG+ K K+ N++SN G S CKS ++ G
Sbjct: 294 SSKFTVVTQFIKDSAGDLAEIKAFYVQNGKVIENSQSNVDGVSGNSITQSFCKSQKTAFG 353
Query: 755 ETVDQNVMGTLKNLGQSMLEHIQVTFSF 782
+ D N G LK +G+++ + + + S
Sbjct: 354 DIDDFNKKGGLKQMGKALAQAMVLVMSI 381
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 492 KWRDLHKAEEQRHDS-SGKQNQTQKKRWLEKVKLRLSRTESDPTPRTVDNGTKHSRSSIR 550
K RD + ++Q D G+ + +K R+ E+VK R+ E V K +
Sbjct: 704 KGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLE 763
Query: 551 RSLLEDLSKELGFEEDSEKDGILEVSTEKDQ 581
+ +D KEL + + +D LE EKDQ
Sbjct: 764 KCREKDQDKELEKDREKNQDKELEKGREKDQ 794
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,527,467
Number of Sequences: 539616
Number of extensions: 12837094
Number of successful extensions: 45095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 617
Number of HSP's that attempted gapping in prelim test: 39053
Number of HSP's gapped (non-prelim): 3518
length of query: 798
length of database: 191,569,459
effective HSP length: 126
effective length of query: 672
effective length of database: 123,577,843
effective search space: 83044310496
effective search space used: 83044310496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)