Query 003745
Match_columns 798
No_of_seqs 297 out of 1703
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 02:41:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003745.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003745hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fkma1 a.69.2.1 (A:249-442) Y 100.0 1.3E-28 9.4E-33 242.0 15.3 117 24-172 30-146 (194)
2 d1fkma2 a.69.2.1 (A:443-630) Y 99.9 1E-22 7.4E-27 199.6 12.9 143 298-441 1-187 (188)
3 d1erda_ a.10.1.1 (A:) ER-2 {Eu 8.7 26 0.0019 24.4 -0.6 12 146-157 11-22 (40)
4 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 5.9 59 0.0043 21.5 0.1 7 152-158 24-30 (31)
5 d2ijqa1 a.246.2.1 (A:14-158) H 4.4 2.7E+02 0.02 24.4 3.6 49 390-438 60-113 (145)
6 d1ex2a_ c.51.4.2 (A:) Maf prot 4.3 2E+02 0.014 25.7 2.6 37 544-584 8-44 (185)
7 d1pi1a_ a.29.7.1 (A:) Mob1a {H 4.2 2.3E+02 0.016 25.9 3.0 43 306-348 121-163 (185)
8 d2cwya1 a.246.2.1 (A:1-94) Hyp 3.9 2.6E+02 0.019 22.6 2.9 48 389-437 41-91 (94)
9 d2amha1 c.51.4.2 (A:7-207) Maf 3.6 2.4E+02 0.018 25.1 2.6 41 544-584 9-49 (201)
10 d1cg5b_ a.1.1.2 (B:) Hemoglobi 3.5 1E+03 0.075 19.3 6.8 35 326-361 90-130 (141)
No 1
>d1fkma1 a.69.2.1 (A:249-442) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=1.3e-28 Score=242.00 Aligned_cols=117 Identities=27% Similarity=0.519 Sum_probs=102.1
Q ss_pred ccCCCCCchHHHHHHhhCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCCCCCCCCccc
Q 003745 24 RSGPLANLRGVKWRINLGILPSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMDNPLSQNPDSTWGR 103 (798)
Q Consensus 24 r~~~~~~LR~~vWriLLG~lP~~~s~~ee~r~~l~~~R~~Y~~Lr~~~li~P~~~kd~~~~~d~~idnPLs~n~dS~W~~ 103 (798)
++|.++.+|+.+|+++||++|.+.+ +|...+.++|+.|..++.......
T Consensus 30 ~~Gip~~lR~~vW~~llg~~~~~~~---~~~~~~~~~~~~y~~~~~~~~~~~---------------------------- 78 (194)
T d1fkma1 30 WNGIPKIHRPVVWKLLIGYLPVNTK---RQEGFLQRKRKEYRDSLKHTFSDQ---------------------------- 78 (194)
T ss_dssp TTCCCGGGHHHHHHHHTTCSCSBGG---GHHHHHHHHHHHHHHHHHHTSSSS----------------------------
T ss_pred HcCCChHHHHHHHHHHHhhcCCchh---hHHHHHHHHhhhhhhhhhhhhhcc----------------------------
Confidence 4788999999999999999998765 456678899999999887755321
Q ss_pred cCCChHHHHhHHhhhcccCCCCccCCCCccHHHHHHHHHHHHHhhCCCCCccCCchhhHHHHHHHhhhh
Q 003745 104 FFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVD 172 (798)
Q Consensus 104 ~F~d~El~kqI~kDV~RT~pe~~~fFq~~~~q~~L~RIL~~yal~nPeiGY~QGMnEIlApLL~V~~~D 172 (798)
...+.++.++|++||.||+|++ .+|+.+.++++|+|||.+||.+||++|||||||+|+||||+++..+
T Consensus 79 ~~~~~~~~~~I~~Dv~RT~~~~-~~f~~~~~~~~L~rIL~~ya~~np~~gY~QGmn~i~a~ll~v~~~~ 146 (194)
T d1fkma1 79 HSRDIPTWHQIEIDIPRTNPHI-PLYQFKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFLTE 146 (194)
T ss_dssp CSTHHHHHHHHHHHGGGSSTTS-GGGGSHHHHHHHHHHHHHHHHHCTTTCSCTTHHHHHHHHHHHHHGG
T ss_pred cccchHHHHHHHHHHHhcCCcc-cccccchhHHHHHHHHHHHHHHCCCCCeeecchHHHHHHHHHHhhh
Confidence 2235678899999999999999 9999999999999999999999999999999999999999999764
No 2
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.87 E-value=1e-22 Score=199.60 Aligned_cols=143 Identities=17% Similarity=0.309 Sum_probs=114.9
Q ss_pred ChhHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCcchhhHHHHHhhCcCCChHHHHHHHHHHhhcCCCCCCCC-------
Q 003745 298 CLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKD------- 370 (798)
Q Consensus 298 glp~i~~~~~~l~~LLk~~DPeL~~HL~~lgIePqlFalRWf~tLFaREFpL~dlLrIWD~Ifa~g~~~~~~~------- 370 (798)
|+||+...+..+..+|+.+||+||+||.++||++.+|++|||+|||+|+||+++++||||.||+++.......
T Consensus 1 gqpGi~~~~~~l~~ll~~~dp~L~~hl~~~~i~~~~~~~rW~~~lf~~~~~~~~~~rlWD~~~~~~~~~~~~~~~~~l~~ 80 (188)
T d1fkma2 1 GQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSND 80 (188)
T ss_dssp TCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHHC-------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeeeHHHHHHHhhccCCHHHHHHHHHHHHhCCchhhhhhhhhhhhh
Confidence 6899999999999999999999999999999999999999999999999999999999999999865310000
Q ss_pred --------CCCC-------------------------CCCCccccCCChhHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 003745 371 --------TEDD-------------------------AGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQR 417 (798)
Q Consensus 371 --------~e~~-------------------------~~~~F~i~~s~r~~fI~~iavAmLl~~R~~LL~~d~~te~Lq~ 417 (798)
.+.. .......-......++.|+|+|||+..|+.|++.+ ++++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~A~L~~~r~~Ll~~d-f~~~l~~ 159 (188)
T d1fkma2 81 IKPPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLMEMD-FQETITF 159 (188)
T ss_dssp -----------------------------------------------CHHHHHHHHHHHHHHHTHHHHTTCC-HHHHHHH
T ss_pred hccccccccccchhhhhhccccccccccccccchhhhhhcccccccccchHHHHHHHHHHHHHHHHHHHHcc-HHHHHHH
Confidence 0000 00000000122458899999999999999999876 5999999
Q ss_pred HHCCCCC----CCHHHHHHHHHHHHHHH
Q 003745 418 LLNFPVN----INLKKIIGKTKSLQALA 441 (798)
Q Consensus 418 L~n~P~~----iDv~~LI~kA~~L~~~~ 441 (798)
|+++|+. .|++.|+.+|..++..+
T Consensus 160 Lq~~P~~~~~~~di~~ll~~A~~~~~~~ 187 (188)
T d1fkma2 160 LQNPPTKDWTETDIEMLLSEAFIWQSLY 187 (188)
T ss_dssp HTSCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999974 59999999999998875
No 3
>d1erda_ a.10.1.1 (A:) ER-2 {Euplotes raikovi [TaxId: 5938]}
Probab=8.74 E-value=26 Score=24.42 Aligned_cols=12 Identities=42% Similarity=0.661 Sum_probs=9.4
Q ss_pred HhhCCCCCccCC
Q 003745 146 CLRHPEFGYRQG 157 (798)
Q Consensus 146 al~nPeiGY~QG 157 (798)
+-.|.-+|||||
T Consensus 11 scehtmcgycqg 22 (40)
T d1erda_ 11 SCEHTMCGYCQG 22 (40)
T ss_dssp HTCGGGGGGSCH
T ss_pred hccccccccccC
Confidence 346778999998
No 4
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=5.92 E-value=59 Score=21.52 Aligned_cols=7 Identities=57% Similarity=0.833 Sum_probs=5.2
Q ss_pred CCccCCc
Q 003745 152 FGYRQGM 158 (798)
Q Consensus 152 iGY~QGM 158 (798)
-|||||-
T Consensus 24 ngycqgc 30 (31)
T d1wt8a1 24 NGYCQGC 30 (31)
T ss_dssp SEECTTC
T ss_pred CcccccC
Confidence 3889884
No 5
>d2ijqa1 a.246.2.1 (A:14-158) Hypothetical protein rrnAC1037 {Haloarcula marismortui [TaxId: 2238]}
Probab=4.37 E-value=2.7e+02 Score=24.38 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHH-HHhcC-CChHHHHHHHHCCCCC---CCHHHHHHHHHHHH
Q 003745 390 IAAMAVSMMLYIRS-SLLAT-ENATTCLQRLLNFPVN---INLKKIIGKTKSLQ 438 (798)
Q Consensus 390 I~~iavAmLl~~R~-~LL~~-d~~te~Lq~L~n~P~~---iDv~~LI~kA~~L~ 438 (798)
++-+|+|++.+.+. .+-.. ..+...+..|..+|+. +|+..|+..+..+.
T Consensus 60 LIQ~Aaa~~hh~~~gN~~GA~~l~~~al~~L~~~~~~~~Gidv~~l~~~~~~~~ 113 (145)
T d2ijqa1 60 MVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPNDYYGVDLLDVRTTVTNAL 113 (145)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCTTGGGBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCccCCccHHHHHHHHHHHH
Confidence 45678888875443 22221 1145678889999974 99999999777664
No 6
>d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]}
Probab=4.26 E-value=2e+02 Score=25.66 Aligned_cols=37 Identities=22% Similarity=0.162 Sum_probs=28.5
Q ss_pred cCcchhhhhhHHHHhhhhCCcccccccccccccccCCCCch
Q 003745 544 HSRSSIRRSLLEDLSKELGFEEDSEKDGILEVSTEKDQPSV 584 (798)
Q Consensus 544 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (798)
.+.||-||.||+ ++|.+-+....+.+|.......+.+
T Consensus 8 AS~SprR~~lL~----~~gi~f~v~~~~idE~~~~~~~p~~ 44 (185)
T d1ex2a_ 8 ASQSPRRKELLD----LLQLPYSIIVSEVEEKLNRNFSPEE 44 (185)
T ss_dssp CCCCHHHHHHHH----TTCCCCEECCCCCCCCCCTTSCHHH
T ss_pred ECCCHHHHHHHH----hCCCCCEEECCCCCCCcCCCCCHHH
Confidence 467889999994 5787777778888888777766665
No 7
>d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.21 E-value=2.3e+02 Score=25.87 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCcchhhHHHHHhhCcCCC
Q 003745 306 SSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFS 348 (798)
Q Consensus 306 ~~~l~~LLk~~DPeL~~HL~~lgIePqlFalRWf~tLFaREFp 348 (798)
+.+++++...+--.-+.+|.++++++.+..+===.++|+++|.
T Consensus 121 ~rrLfRVyaHiY~~Hf~~~~~l~~e~hlNt~FkHF~~f~~ef~ 163 (185)
T d1pi1a_ 121 LKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFN 163 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHccchHHHHHHHHHHHHHHHHhC
Confidence 3455555555555555667889999876432112234555554
No 8
>d2cwya1 a.246.2.1 (A:1-94) Hypothetical protein TTHA0068 {Thermus thermophilus [TaxId: 274]}
Probab=3.91 E-value=2.6e+02 Score=22.56 Aligned_cols=48 Identities=10% Similarity=0.170 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHCCCC---CCCHHHHHHHHHHH
Q 003745 389 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPV---NINLKKIIGKTKSL 437 (798)
Q Consensus 389 fI~~iavAmLl~~R~~LL~~d~~te~Lq~L~n~P~---~iDv~~LI~kA~~L 437 (798)
-++-+|+|+....+.. =+.......+..|..+|+ .+|+..|++.+...
T Consensus 41 gLIQ~Ava~~h~~~~~-ga~~ll~ka~~~L~~~~~~~~Gldv~~l~~~~~~~ 91 (94)
T d2cwya1 41 GVILLAAALHQRRLGR-PGLRNLRKAEARLEGLPCPLMGLDWRSLLQEARRR 91 (94)
T ss_dssp HHHHHHHHHHHHHTTC-CCHHHHHHHHHHHTTCCSSBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCH-HHHHHHHHHHHHHhcCCccccCcCHHHHHHHHHHH
Confidence 3556788864433221 000113456778888886 38999999877653
No 9
>d2amha1 c.51.4.2 (A:7-207) Maf homologue Tb11.01.5890 {Trypanosoma brucei [TaxId: 5691]}
Probab=3.58 E-value=2.4e+02 Score=25.08 Aligned_cols=41 Identities=15% Similarity=-0.022 Sum_probs=27.5
Q ss_pred cCcchhhhhhHHHHhhhhCCcccccccccccccccCCCCch
Q 003745 544 HSRSSIRRSLLEDLSKELGFEEDSEKDGILEVSTEKDQPSV 584 (798)
Q Consensus 544 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (798)
.+.||.|+.||+.+.-.++.+=.....+++|..-+...+.+
T Consensus 9 AS~S~rR~~lL~~~g~~~~~~f~v~~~~idE~~~~~~~p~~ 49 (201)
T d2amha1 9 GTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFE 49 (201)
T ss_dssp CCCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCCSSHHH
T ss_pred ecCCHHHHHHHHhcCCcCCCCEEEeCCCCCCCCCccCCHHH
Confidence 46788999999988755544444555666776666655554
No 10
>d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]}
Probab=3.45 E-value=1e+03 Score=19.30 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=24.0
Q ss_pred HcCCCCcch------hhHHHHHhhCcCCChHHHHHHHHHHhh
Q 003745 326 ELGVEPQYF------GLRWLRVLFGREFSLGDLLIIWDEIFA 361 (798)
Q Consensus 326 ~lgIePqlF------alRWf~tLFaREFpL~dlLrIWD~Ifa 361 (798)
..||.|.+| .+.=+.--++..|. +.+---|+.+|.
T Consensus 90 ~~~v~p~~F~~~g~~ll~~l~~~lg~~ft-~e~~~AW~k~~~ 130 (141)
T d1cg5b_ 90 EIGVDTQNFKLLGQTFMVELALHYKKTFR-PKEHAAAYKFFR 130 (141)
T ss_dssp HHTCCTHHHHHHHHHHHHHHHHHHGGGCC-HHHHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHcCccCC-HHHHHHHHHHHH
Confidence 579999887 22233344666675 777888998885
Done!