BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003746
(798 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 309/834 (37%), Positives = 482/834 (57%), Gaps = 48/834 (5%)
Query: 7 LAHLSSTIKSSVNAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAAS 66
LA ++T S +N K T + L+ C++ + + GL D +
Sbjct: 15 LATTTTTKPSLLNQSKCTKAT------PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTIT 68
Query: 67 RLIKFSTDLLPFIEMSYSFKIFAFLES-PNGFIFNTMMRAYIQRNVPQQAICLYKLMLNN 125
+L+ S +L +S++ ++F ES F++N+++R Y + +AI L+ M+N+
Sbjct: 69 KLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNS 128
Query: 126 NVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAA 185
+ D YT+P A A + G IH ++K G+ D++V N+L++ YA CG+L +A
Sbjct: 129 GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 186 RKLFDESPVLDLVSWNSILAGYVNADNVEEA----------------------------- 216
RK+FDE ++VSW S++ GY D ++A
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 217 -----------KFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSAL 265
FI N E N + ++++ ++ + + A RLF E +L +A+
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 266 ISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGI 325
S Y + + EAL +F M+D V D + ++S +S+C+ L + G S H ++ G
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 326 ECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDA 385
E + N+ NALI MY C TA ++FD N +++WNS+++GY++ G V+ A F+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 386 MIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQ-HHGIRPDEATLVSVISACTHLVALDQ 444
M EK++VSW+T+ISG Q F E + +F MQ G+ D T++S+ SAC HL ALD
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 445 GKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAM 504
KWI+ YI KNG++++ LGTTL+DM+ + G ++A+ +F+ + VS+W A I AM
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 505 NGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSK 564
G A++++E+F +M + G+ P+ + FVG L AC H GLV +G F SM++ H + P
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 565 HYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVEL 624
HYGCMVDLLGRAG+L+EA +LIE MPM P+ W +LL AC+ G+ EM K+ L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 625 QPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRT 684
P+ G +VLLSN++AS GRW+D+ +VR M +G+ K PG S I+ G HEF +GD +
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 685 HPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITIS 744
HP++ I+ MLDE++++ G+ PD V D+D++EK L RHSEKLA+A+GLI+ +
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSN 788
Query: 745 PPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
IRI+KNLR+C+DCH+ AKF S+ ++REI++RD +RFH+ + G CSC DFW
Sbjct: 789 KGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 454/764 (59%), Gaps = 64/764 (8%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
L C++ + I +QMI GL +A S+LI+F F + Y+ +F ++ PN
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDH 156
I+NTM R + + P A+ LY M++ + ++YT+P + ++ A + EG+ IH H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 157 VLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEA 216
VLK G D D+YV+ +LI+MY G L A K+FD+SP D+VS+ +++ GY + +E A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 217 KFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYE 276
+ +++++P +++++ N+MI + GN EA LFK+M K +
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN------------------ 261
Query: 277 EALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALI 336
V DE +V+V+SACA ++ G VH G + + NALI
Sbjct: 262 -------------VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 337 HMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWST 396
+YS CGE+ TA LF+ D+ISWN++I G
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGG--------------------------- 341
Query: 397 MISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYI--RK 454
Y + + E L LF EM G P++ T++S++ AC HL A+D G+WIH YI R
Sbjct: 342 ----YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 455 NGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEM 514
G+ S L T+LIDMY K G ++ A +VF+ K +SSWNA+I GFAM+G AD S ++
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 515 FSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLG 574
FS M+K G+ P++ITFVG+L AC H G++D G F +M Q++++ P +HYGCM+DLLG
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 575 RAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVL 634
+G+ KEAEE+I M M PD W +LL ACK HG+ E+GE L++++P++ G +VL
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
Query: 635 LSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNM 694
LSNI+AS GRW++V + R ++ +G+ K+PGCS IE + ++HEF+ GD+ HP+ EI M
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 637
Query: 695 LDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKN 754
L+EM L+ G+ PDT EV ++++E KE L HSEKLAIAFGLI+ P + I+KN
Sbjct: 638 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 697
Query: 755 LRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
LR+C +CH A K IS+ + REI+ RDR RFHHF+ G CSC D+W
Sbjct: 698 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/698 (39%), Positives = 423/698 (60%), Gaps = 44/698 (6%)
Query: 145 LSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVC--GDLSAARKLFDESPVLDLVSWNS 202
+S+ + K H H+++ G SD Y + L M A+ L ARK+FDE P + +WN+
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 203 ILAGYVNA-----------DNVEEAKFIYNKMP--------------------------- 224
++ Y + D V E++ NK
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 225 --ERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF 282
++ +NS+I + G++ AC++F + +KD+VSW+++I+ + Q ++AL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 283 MNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSC 342
M V V +V VLSACA + ++ G V + + + + L NA++ MY+ C
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 343 GEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYA 402
G I A++LFDA D ++W +M+ GY E AR + ++M +KD+V+W+ +IS Y
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 403 QHDQFSETLSLFMEMQ-HHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINS 461
Q+ + +E L +F E+Q ++ ++ TLVS +SAC + AL+ G+WIH+YI+K+G+++N
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 462 ILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKS 521
+ + LI MY K G ++ + EVF+ E++ V W+A+I G AM+G +++++MF +M+++
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 522 GVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKE 581
V PN +TF V AC H GLVDE F+ M + + P KHY C+VD+LGR+G L++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 582 AEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHAS 641
A + IE+MP+ P + WGALLGACK H + + E +L+EL+P +DG HVLLSNI+A
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 642 KGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKK 701
G+W++V E+R M G+ K PGCS IE +G+IHEFL+GD HP ++ L E+ +K
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 702 LKLEGYAPDTLEVAFDIDQEE-KETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICND 760
LK GY P+ +V I++EE KE +L HSEKLAI +GLI+ P IR++KNLR+C D
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700
Query: 761 CHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
CH+ AK IS+ +DREI+VRDR+RFHHF++G CSC DFW
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 250/537 (46%), Gaps = 106/537 (19%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
+++C S +Q Q MI TG +D ++AS+L + L F + Y+ K+F + PN
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA-LSSFASLEYARKVFDEIPKPNS 95
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDN-YTYPLLAQASALRLSVFEGKLIHD 155
F +NT++RAY P +I + M++ + N YT+P L +A+A S+ G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 156 HVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEE 215
+K+ SDV+V N+LI+ Y CGDL +A K+F D+VSWNS++ G+V + ++
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 216 AKFIYNKMPERNIIAS---------------------------------------NSMIV 236
A ++ KM ++ AS N+M+
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 237 LFGRKGNVAEACRLF-------------------------------KEMPKKDLVSWSAL 265
++ + G++ +A RLF MP+KD+V+W+AL
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 266 ISCYEQNEMYEEALVLFMNM-IDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIG 324
IS YEQN EAL++F + + + ++++ +VS LSACA + ++ G +H+ K G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 325 IECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFD 384
I ++ +ALIHMYS CG++ + ++F++ D+ W++M
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM------------------ 437
Query: 385 AMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQ 444
I G A H +E + +F +MQ ++P+ T +V AC+H +D+
Sbjct: 438 -------------IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 445 GKWIHAYIRKN-GLKINSILGTTLIDMYMKLGCVDNALEVFHGTE-EKGVSSWNALI 499
+ + + N G+ ++D+ + G ++ A++ S W AL+
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 348/550 (63%), Gaps = 1/550 (0%)
Query: 250 LFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTV 309
+F + D W+ +I + ++ E +L+L+ M+ + S+L AC+NL+
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 310 VKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISG 369
+ T +HA K+G E + N+LI+ Y+ G A LFD D +SWNS+I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 370 YLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATL 429
Y+K G ++ A LF M EK+ +SW+TMISGY Q D E L LF EMQ+ + PD +L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 430 VSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEE 489
+ +SAC L AL+QGKWIH+Y+ K ++++S+LG LIDMY K G ++ ALEVF ++
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 490 KGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRH 549
K V +W ALI G+A +G +++ F EM+K G+ PN ITF VL AC + GLV+EG
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 550 FNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHG 609
F SM +++ L+P +HYGC+VDLLGRAG+L EA+ I+ MP+ P+ WGALL AC+ H
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 610 DHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMI 669
+ E+GE +G L+ + P H G +V +NIHA +WD E R +M +GV K+PGCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 670 EANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFD-IDQEEKETTLF 728
G HEFLAGDR+HP+I +I + M +KL+ GY P+ E+ D +D +E+E +
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 729 RHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFK 788
+HSEKLAI +GLI P IRIMKNLR+C DCH K IS+ + R+IV+RDR RFHHF+
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 610
Query: 789 HGSCSCMDFW 798
G CSC D+W
Sbjct: 611 DGKCSCGDYW 620
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 242/509 (47%), Gaps = 109/509 (21%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKF-----STDLLPFIEMSYSFKIFAFL 91
LQ+C ++ QI ++M+ TGL+ D++A ++ + F S+D LP+ ++ +F
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI-----VFDGF 75
Query: 92 ESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGK 151
+ P+ F++N M+R + + P++++ LY+ ML ++ + YT+P L +A + LS FE
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS-NLSAFEET 134
Query: 152 L-IHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
IH + K G+++DVY N+LIN YAV G+ A LFD P D VSWNS++ GYV A
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 211 DNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYE 270
++ A ++ KM E+N I+ +MI S Y
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMI-------------------------------SGYV 223
Query: 271 QNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYIN 330
Q +M +EAL LF M + V D V + + LSACA L ++ G +H+ K I
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 331 LQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKD 390
L LI MY+ CGE+ A ++F + +W ++I
Sbjct: 284 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI----------------------- 320
Query: 391 VVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWI-H 449
SGYA H E +S FMEMQ GI+P+ T +V++AC++ +++GK I +
Sbjct: 321 --------SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 450 AYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLAD 509
+ R LK I+ Y GC+ + ++G A GL D
Sbjct: 373 SMERDYNLK-------PTIEHY---GCIVD-------------------LLGRA--GLLD 401
Query: 510 KSLEMFSEMKKSGVTPNEITFVGVLGACR 538
++ EM + PN + + +L ACR
Sbjct: 402 EAKRFIQEMP---LKPNAVIWGALLKACR 427
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/569 (43%), Positives = 372/569 (65%), Gaps = 17/569 (2%)
Query: 247 ACRLFKEMPKKDLVSWSALISCYEQNEMYEE--ALVLFMNMI-DHRVMVDEVVVVSVLSA 303
A ++F +MP+++ SW+ +I + +++ + A+ LF M+ D V + SVL A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 304 CANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLF----------- 352
CA ++ G +H LA+K G + + L+ MY CG + A LF
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 353 ---DAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSE 409
+ +++ WN MI GY++ G + AR LFD M ++ VVSW+TMISGY+ + F +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 410 TLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLID 469
+ +F EM+ IRP+ TLVSV+ A + L +L+ G+W+H Y +G++I+ +LG+ LID
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 470 MYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEIT 529
MY K G ++ A+ VF + V +W+A+I GFA++G A +++ F +M+++GV P+++
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 530 FVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESM 589
++ +L AC H GLV+EG R+F+ M+ LEP +HYGCMVDLLGR+G+L EAEE I +M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 590 PMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVL 649
P+ PD W ALLGAC+ G+ EMG+RV L+++ P G +V LSN++AS+G W +V
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 650 EVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAP 709
E+R M + + K PGCS+I+ +G++HEF+ D +HP+ EI++ML E++ KL+L GY P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 710 DTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFIS 769
T +V ++++E+KE L HSEK+A AFGLI+ SP PIRI+KNLRIC DCH++ K IS
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 770 RAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
+ + R+I VRDR RFHHF+ GSCSCMD+W
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 250/558 (44%), Gaps = 89/558 (15%)
Query: 33 LETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKF-STDLLPFIEMSYSFKIFAFL 91
L + C++ + +QI + I +G + DT AA+ +++F +T L ++ Y+ KIF +
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 92 ESPNGFIFNTMMRAYIQRNVPQQAICL---YKLMLNNNVGVDNYTYPLLAQASALRLSVF 148
N F +NT++R + + + + I + Y++M + V + +T+P + +A A +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 149 EGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYV 208
EGK IH LK GF D +V + L+ MY +CG + AR LF Y
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF-----------------YK 188
Query: 209 NADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISC 268
N + + + I+ N MI + R G+ A LF +M ++ +VSW+ +IS
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 248
Query: 269 YEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECY 328
Y N +++A+ +F M + + V +VSVL A + L ++ G +H A GI
Sbjct: 249 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID 308
Query: 329 INLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIE 388
L +ALI MYS CG I A +F+ ++I+W
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITW------------------------- 343
Query: 389 KDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQG-KW 447
S MI+G+A H Q + + F +M+ G+RP + +++++AC+H +++G ++
Sbjct: 344 ------SAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 448 IHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGL 507
+ +GL E + + ++ +GL
Sbjct: 398 FSQMVSVDGL-------------------------------EPRIEHYGCMVDLLGRSGL 426
Query: 508 ADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYG 567
D++ E M + P+++ + +LGACR G V+ G R N ++ + +S Y
Sbjct: 427 LDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANILMD--MVPHDSGAYV 481
Query: 568 CMVDLLGRAGMLKEAEEL 585
+ ++ G E E+
Sbjct: 482 ALSNMYASQGNWSEVSEM 499
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/803 (34%), Positives = 436/803 (54%), Gaps = 78/803 (9%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
L++C S K+ QIL + GL + F ++L+ + + + ++F ++S
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL---FCRYGSVDEAARVFEPIDSKLN 100
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVG--VDNYTYPLLAQASALRLSVFEGKLIH 154
+++TM++ + + + +A+ + M ++V V N+TY L L V GK IH
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV--GKEIH 158
Query: 155 DHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVE 214
++K+GF D++ L NMYA C ++ ARK+FD P DLVSWN+I+AGY
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 215 EAKFIYNKMPERNIIAS---------------------------------------NSMI 235
A + M E N+ S +++
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 236 VLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEV 295
++ + G++ A +LF M ++++VSW+++I Y QNE +EA+++F M+D V +V
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 296 VVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAG 355
V+ L ACA+L ++ G +H L+V++G++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLD----------------------------- 369
Query: 356 HNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFM 415
N+ ++ NS+IS Y KC V+ A ++F + + +VSW+ MI G+AQ+ + + L+ F
Sbjct: 370 RNVSVV--NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 416 EMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLG 475
+M+ ++PD T VSVI+A L KWIH + ++ L N + T L+DMY K G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 476 CVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLG 535
+ A +F E+ V++WNA+I G+ +G +LE+F EM+K + PN +TF+ V+
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 536 ACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDV 595
AC H GLV+ G + F M + + +E + HYG MVDLLGRAG L EA + I MP+ P V
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 596 ATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMM 655
+GA+LGAC+ H + E+ +L EL PD G+HVLL+NI+ + W+ V +VR M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 656 VRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVA 715
+R+G+ K PGCSM+E +H F +G HP +I L+++ +K GY PDT +
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLV 726
Query: 716 FDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDRE 775
++ + KE L HSEKLAI+FGL+ + I + KNLR+C DCH A K+IS RE
Sbjct: 727 LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 776 IVVRDRHRFHHFKHGSCSCMDFW 798
IVVRD RFHHFK+G+CSC D+W
Sbjct: 787 IVVRDMQRFHHFKNGACSCGDYW 809
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 25/206 (12%)
Query: 432 VISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKG 491
++ C+ L L Q I + KNGL T L+ ++ + G VD A VF + K
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 492 VSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFN 551
++ ++ GFA DK+L+ F M+ V P F +L C DE
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG-----DEAELRVG 154
Query: 552 SMIQEHRLEPNSKHYGCMVDLLGRAGM---------LKEAEELIESMPMSPDVATWGALL 602
I H L S G +DL G+ + EA ++ + MP D+ +W ++
Sbjct: 155 KEI--HGLLVKS---GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIV 208
Query: 603 GACKKHGDHEMGERVGRKLVE--LQP 626
++G M + + + E L+P
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKP 234
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/784 (34%), Positives = 433/784 (55%), Gaps = 66/784 (8%)
Query: 34 ETHLQKCQS----------FKQFTQILSQMILTGLIADTFAA-SRLIKFST--------D 74
+T +QK Q+ K++ +S + TG + R+ ++S+
Sbjct: 45 QTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISG 104
Query: 75 LLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTY 134
L E + K+F + + +N M++ Y++ +A L+++M +V N
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 135 PLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPV 194
AQ V + + + D + + +DV N L++ Y + A LF
Sbjct: 165 SGYAQNGC----VDDARSVFDRMPEK---NDVSWN-ALLSAYVQNSKMEEACMLFKSREN 216
Query: 195 LDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEM 254
LVSWN +L G+V + EA+ ++ M R++++ N++I + + G + EA +LF E
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 255 PKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGT 314
P +D+ +W+A++S Y QN M EEA LF M + +EV
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVS------------------ 314
Query: 315 SVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCG 374
NA++ Y + A++LFD ++ +WN+MI+GY +CG
Sbjct: 315 -----------------WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 375 SVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVIS 434
+ +A+ LFD M ++D VSW+ MI+GY+Q E L LF++M+ G R + ++ S +S
Sbjct: 358 KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 435 ACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSS 494
C +VAL+ GK +H + K G + +G L+ MY K G ++ A ++F K + S
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 495 WNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMI 554
WN +I G++ +G + +L F MK+ G+ P++ T V VL AC H GLVD+G ++F +M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 555 QEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMG 614
Q++ + PNS+HY CMVDLLGRAG+L++A L+++MP PD A WG LLGA + HG+ E+
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Query: 615 ERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGI 674
E K+ ++P++ G +VLLSN++AS GRW DV ++R M +GV K+PG S IE
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Query: 675 IHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKL 734
H F GD HP+ +EI L+E+ ++K GY T V D+++EEKE + HSE+L
Sbjct: 658 THTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERL 717
Query: 735 AIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSC 794
A+A+G++ +S PIR++KNLR+C DCH A K+++R R I++RD +RFHHFK GSCSC
Sbjct: 718 AVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSC 777
Query: 795 MDFW 798
D+W
Sbjct: 778 GDYW 781
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/554 (43%), Positives = 358/554 (64%), Gaps = 2/554 (0%)
Query: 247 ACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMID--HRVMVDEVVVVSVLSAC 304
A ++ K L + +++I + ++ + E++ + ++ + + D V ++ AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 305 ANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWN 364
L + + G VH + ++ G + ++Q LI +Y+ G + + K+F++ D +
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 365 SMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRP 424
+M++ +CG V AR LF+ M E+D ++W+ MISGYAQ + E L++F MQ G++
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 425 DEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVF 484
+ ++SV+SACT L ALDQG+W H+YI +N +KI L TTL+D+Y K G ++ A+EVF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 485 HGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVD 544
G EEK V +W++ + G AMNG +K LE+FS MK+ GVTPN +TFV VL C +G VD
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 545 EGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGA 604
EG RHF+SM E +EP +HYGC+VDL RAG L++A +I+ MPM P A W +LL A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 605 CKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIP 664
+ + + E+G +K++EL+ + G +VLLSNI+A WD+V VR M +GV K P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 665 GCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKE 724
GCS++E NG +HEF GD++HP+ +ID + +++++L+L GY DT V FDID+EEKE
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKE 538
Query: 725 TTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRF 784
L HSEK AIAFG++++ PIRI+KNLR+C DCH + IS+ F+REI+VRDR+RF
Sbjct: 539 DALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRF 598
Query: 785 HHFKHGSCSCMDFW 798
HHFK G CSC FW
Sbjct: 599 HHFKDGHCSCNGFW 612
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 208/464 (44%), Gaps = 71/464 (15%)
Query: 42 SFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNT 101
+FK+ QI +++ + G + D +K + L + Y+ +I E P F N+
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVK-AVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 102 MMRAYIQRNVPQQAICLYKLMLN--NNVGVDNYTYPLLAQA-SALRLSVFEGKLIHDHVL 158
M+RA+ + VP+++ Y+ +L+ N++ DNYT L QA + LR+ G +H +
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE-TGLQVHGMTI 135
Query: 159 KAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKF 218
+ GFD+D +V LI++YA G L + K+F+ P D V +++ +V A+
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 219 IYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEA 278
++ MPER+ IA N+M IS Y Q EA
Sbjct: 196 LFEGMPERDPIAWNAM-------------------------------ISGYAQVGESREA 224
Query: 279 LVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHM 338
L +F M V V+ V ++SVLSAC L + G H+ + I+ + L L+ +
Sbjct: 225 LNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDL 284
Query: 339 YSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMI 398
Y+ CG++ A ++F ++ +W+S ++G G EK
Sbjct: 285 YAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKC------------------- 325
Query: 399 SGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLK 458
L LF M+ G+ P+ T VSV+ C+ + +D+G+ H +N
Sbjct: 326 ------------LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFG 372
Query: 459 INSILG--TTLIDMYMKLGCVDNALEVFHGTEEKG-VSSWNALI 499
I L L+D+Y + G +++A+ + K + W++L+
Sbjct: 373 IEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/525 (45%), Positives = 347/525 (66%), Gaps = 7/525 (1%)
Query: 281 LFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYS 340
+++ M +HRV D +L + N + G HA + G++ ++ +L++MYS
Sbjct: 49 VYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYS 108
Query: 341 SCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISG 400
SCG++ +A+++FD + DL +WNS+++ Y K G ++ AR LFD M E++V+SWS +I+G
Sbjct: 109 SCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLING 168
Query: 401 YAQHDQFSETLSLFMEMQ-----HHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKN 455
Y ++ E L LF EMQ +RP+E T+ +V+SAC L AL+QGKW+HAYI K
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY 228
Query: 456 GLKINSILGTTLIDMYMKLGCVDNALEVFHGT-EEKGVSSWNALIIGFAMNGLADKSLEM 514
++I+ +LGT LIDMY K G ++ A VF+ +K V +++A+I AM GL D+ ++
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 515 FSEMKKS-GVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLL 573
FSEM S + PN +TFVG+LGAC H GL++EG +F MI+E + P+ +HYGCMVDL
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 574 GRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHV 633
GR+G++KEAE I SMPM PDV WG+LL + GD + E ++L+EL P + G +V
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 634 LLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDN 693
LLSN++A GRW +V +R M +G+ K+PGCS +E G++HEF+ GD + + I
Sbjct: 409 LLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYA 468
Query: 694 MLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMK 753
MLDE+ ++L+ GY DT EV D+++++KE L HSEKLAIAF L+ P P+RI+K
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528
Query: 754 NLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
NLRIC DCH K IS+ F REIVVRD +RFHHF+ GSCSC DFW
Sbjct: 529 NLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 201/419 (47%), Gaps = 68/419 (16%)
Query: 97 FIFNTMMRAYIQR-NVPQQ--AICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLI 153
F++N ++RA + + PQ+ I +Y M N+ V D +T+P L + L + G+
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 154 HDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNV 213
H +L G D D +V +L+NMY+ CGDL +A+++FD+S DL +WNS++ Y A +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 214 EEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEM--PKKDLVSWSALISCYEQ 271
++A+ ++++MPERN+I+ + +I + G EA LF+EM PK
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP-------------- 190
Query: 272 NEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINL 331
NE + V +E + +VLSAC L ++ G VHA K +E I L
Sbjct: 191 NEAF--------------VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVL 236
Query: 332 QNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDV 391
ALI MY+ CG + A+++F+A GS +KDV
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNA------------------LGS------------KKDV 266
Query: 392 VSWSTMISGYAQHDQFSETLSLFMEM-QHHGIRPDEATLVSVISACTHLVALDQGK-WIH 449
++S MI A + E LF EM I P+ T V ++ AC H +++GK +
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 450 AYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGT--EEKGVSSWNALIIGFAMNG 506
I + G+ + ++D+Y + G + A E F + E V W +L+ G M G
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEA-ESFIASMPMEPDVLIWGSLLSGSRMLG 384
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/563 (42%), Positives = 367/563 (65%), Gaps = 6/563 (1%)
Query: 238 FGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVV 297
+ G + + LF + DL ++A I+ N + ++A +L++ ++ + +E
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 298 VSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHN 357
S+L +C+ K+G +H +K G+ + L+ +Y+ G++ +A+K+FD
Sbjct: 134 SSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 358 LDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEM 417
L+S +MI+ Y K G+VE ARALFD+M E+D+VSW+ MI GYAQH ++ L LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 418 QHHG-IRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGC 476
G +PDE T+V+ +SAC+ + AL+ G+WIH +++ + +++N + T LIDMY K G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 477 VDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKK-SGVTPNEITFVGVLG 535
++ A+ VF+ T K + +WNA+I G+AM+G + +L +F+EM+ +G+ P +ITF+G L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 536 ACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDV 595
AC H GLV+EG R F SM QE+ ++P +HYGC+V LLGRAG LK A E I++M M D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 596 ATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMM 655
W ++LG+CK HGD +G+ + L+ L + G +VLLSNI+AS G ++ V +VR +M
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 656 VRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVA 715
+G+VK PG S IE +HEF AGDR H + EI ML ++++++K GY P+T V
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 716 FDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDRE 775
D+++ EKE +L HSE+LAIA+GLI+ P +P++I KNLR+C+DCHT K IS+ R+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609
Query: 776 IVVRDRHRFHHFKHGSCSCMDFW 798
IV+RDR+RFHHF GSCSC DFW
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 199/444 (44%), Gaps = 71/444 (15%)
Query: 3 LATKLAHLSSTIKSSVNAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADT 62
LAT L + + ++ A+ P L++L + K QS + QI + ++ L+
Sbjct: 7 LATSLPQ--NQLSTTATARFRLPPPEKLAVL---IDKSQSVDEVLQIHAAILRHNLLLHP 61
Query: 63 FAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLM 122
+K ++ +S +F P+ F+F + + QA LY +
Sbjct: 62 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 121
Query: 123 LNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDL 182
L++ + + +T+ L ++ + + GKLIH HVLK G D YV L+++YA GD+
Sbjct: 122 LSSEINPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDV 177
Query: 183 SAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKG 242
+A+K+FD P LVS +++ Y NVE A+ +++ M ER+I++ N MI + + G
Sbjct: 178 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 237
Query: 243 NVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLS 302
+A LF+++ + + + DE+ VV+ LS
Sbjct: 238 FPNDALMLFQKL------------------------------LAEGKPKPDEITVVAALS 267
Query: 303 ACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLIS 362
AC+ + ++ G +H I + + LI MYS CG + A +F+ D+++
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 363 WNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQH-HG 421
WN+MI+GY + GY+Q + L LF EMQ G
Sbjct: 328 WNAMIAGY--------------------------AMHGYSQ-----DALRLFNEMQGITG 356
Query: 422 IRPDEATLVSVISACTHLVALDQG 445
++P + T + + AC H +++G
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEG 380
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 24/280 (8%)
Query: 441 ALDQGKWIHAYIRKNGLKINS---ILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNA 497
++D+ IHA I ++ L ++ +L L Y G + ++L +FH T + + + A
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 498 LIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEH 557
I ++NGL D++ ++ ++ S + PNE TF +L +C + + ++ + +
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS-----TKSGKLIHTHVLKF 155
Query: 558 RLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERV 617
L + +VD+ + G + A+++ + MP V++ A++ K G+ E +
Sbjct: 156 GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSS-TAMITCYAKQGNVEAARAL 214
Query: 618 GRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRG---------VVKIPGCSM 668
+ E D ++V++ +A G +D L + ++ G V + CS
Sbjct: 215 FDSMCE--RDIVSWNVMIDG-YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 669 I---EANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLE 705
I E IH F+ R + ++D +K LE
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/568 (42%), Positives = 356/568 (62%), Gaps = 6/568 (1%)
Query: 237 LFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVV 296
++ G + A +F EM +D+V+W+ +I Y + + +EA LF M D VM DE++
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 297 VVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGH 356
+ +++SAC ++ +++ ++ + +L AL+ MY+ G + A + F
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 357 NLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFME 416
+L +M+SGY KCG ++ A+ +FD +KD+V W+TMIS Y + D E L +F E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 417 MQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGC 476
M GI+PD ++ SVISAC +L LD+ KW+H+ I NGL+ + LI+MY K G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 477 VDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGA 536
+D +VF + V SW+++I +M+G A +L +F+ MK+ V PNE+TFVGVL
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 537 CRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVA 596
C H GLV+EG + F SM E+ + P +HYGCMVDL GRA +L+EA E+IESMP++ +V
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 597 TWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMV 656
WG+L+ AC+ HG+ E+G+ ++++EL+PDHDG VL+SNI+A + RW+DV +R +M
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 657 RRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAF 716
+ V K G S I+ NG HEFL GD+ H Q NEI LDE+ KLKL GY PD V
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634
Query: 717 DIDQEEKETTLFRHSEKLAIAFGLITISPPNP------IRIMKNLRICNDCHTAAKFISR 770
D+++EEK+ + HSEKLA+ FGL+ IRI+KNLR+C DCH K +S+
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694
Query: 771 AFDREIVVRDRHRFHHFKHGSCSCMDFW 798
++REI+VRDR RFH +K+G CSC D+W
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 213/499 (42%), Gaps = 108/499 (21%)
Query: 83 YSFKIFAFLESP-NGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTY-PLLAQA 140
Y+ +F+ + SP +FN +R + + P+ I Y+ + + +D +++ P+L
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 141 SALRLSVFEGKLIH----------DHVLKAGF---------------------DSDVYVN 169
S + ++FEG +H D ++ GF DV
Sbjct: 122 SKVS-ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 170 NTLINMYAVCGDLSAARKLF----------DESPVLDLVS-------------------- 199
NT+I Y G + A KLF DE + ++VS
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 200 ---------WNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRL 250
+++ Y A ++ A+ + KM RN+ S +M+ + + G + +A +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 251 FKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVV 310
F + KKDLV W+ +IS Y +++ +EAL +F M + D V + SV+SACANL ++
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 311 KAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGY 370
VH+ G+E +++ NALI+MY+ CG + +F+ +++SW+SM
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM---- 416
Query: 371 LKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLV 430
I+ + H + S+ LSLF M+ + P+E T V
Sbjct: 417 ---------------------------INALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 431 SVISACTHLVALDQGKWIHAYIRKNGLKINSILG--TTLIDMYMKLGCVDNALEVFHGTE 488
V+ C+H +++GK I A + + I L ++D++ + + ALEV
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASM-TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Query: 489 -EKGVSSWNALIIGFAMNG 506
V W +L+ ++G
Sbjct: 509 VASNVVIWGSLMSACRIHG 527
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 410 TLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLID 469
T+ + ++H G R D+ + + ++ A + + AL +G +H K + + T +D
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 470 MYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEIT 529
MY G ++ A VF + V +WN +I + GL D++ ++F EMK S V P+E+
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 530 FVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKH----YGCMVDLLGRAGMLKEAEEL 585
++ AC G+ +N I E +E + + +V + AG + A E
Sbjct: 215 LCNIVSACGRT-----GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 586 IESM 589
M
Sbjct: 270 FRKM 273
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/550 (41%), Positives = 357/550 (64%), Gaps = 1/550 (0%)
Query: 250 LFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTV 309
+F ++ +L ++ LI C+ +A + M+ R+ D + ++ A + +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 310 VKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISG 369
V G H+ V+ G + + ++N+L+HMY++CG I A ++F D++SW SM++G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 370 YLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATL 429
Y KCG VE AR +FD M +++ +WS MI+GYA+++ F + + LF M+ G+ +E +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 430 VSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEE 489
VSVIS+C HL AL+ G+ + Y+ K+ + +N ILGT L+DM+ + G ++ A+ VF G E
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 490 KGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRH 549
SW+++I G A++G A K++ FS+M G P ++TF VL AC H GLV++G
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 550 FNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHG 609
+ +M ++H +EP +HYGC+VD+LGRAG L EAE I M + P+ GALLGACK +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 610 DHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMI 669
+ E+ ERVG L++++P+H G++VLLSNI+A G+WD + +R MM + V K PG S+I
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 670 EANGIIHEFLAG-DRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLF 728
E +G I++F G D+ HP++ +I +E+ K++L GY +T + FD+D+EEKE+++
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIH 552
Query: 729 RHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFK 788
HSEKLAIA+G++ P IRI+KNLR+C DCHT K IS + RE++VRDR+RFHHF+
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 612
Query: 789 HGSCSCMDFW 798
+G CSC D+W
Sbjct: 613 NGVCSCRDYW 622
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 258/558 (46%), Gaps = 103/558 (18%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIE----MSYSFKIFAFLE 92
LQ C SF I ++ T LI+D F ASRL+ D F + + Y++ IF+ ++
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 93 SPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKL 152
+PN F+FN ++R + P +A Y ML + + DN T+P L +AS+ V G+
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 153 IHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADN 212
H +++ GF +DVYV N+L++MYA CG ++AA ++F + D+VSW S++AGY
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 213 VEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQN 272
VE A+ ++++MP RN L +WS +I+ Y +N
Sbjct: 199 VENAREMFDEMPHRN-------------------------------LFTWSIMINGYAKN 227
Query: 273 EMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQ 332
+E+A+ LF M V+ +E V+VSV+S+CA+L ++ G + VK + + L
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 287
Query: 333 NALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVV 392
AL+ M+ CG+I A +F+ D +SW+S+I G G KA F MI
Sbjct: 288 TALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI----- 342
Query: 393 SWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYI 452
SL G P + T +V+SAC+H +++G I+ +
Sbjct: 343 -------------------SL-------GFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 453 RKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSL 512
+K+ HG E + + + ++ M G A K
Sbjct: 377 KKD-----------------------------HGIEPR-LEHYGCIV---DMLGRAGKLA 403
Query: 513 EMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEP-NSKHYGCMVD 571
E + + K V PN +LGAC+ + R N +I +++P +S +Y + +
Sbjct: 404 EAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLI---KVKPEHSGYYVLLSN 460
Query: 572 LLGRAGMLKEAEELIESM 589
+ AG + E L + M
Sbjct: 461 IYACAGQWDKIESLRDMM 478
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/804 (34%), Positives = 436/804 (54%), Gaps = 75/804 (9%)
Query: 33 LETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLE 92
+ T + C + + + ++++++ I + +++L+ L ++ + F ++
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG---NVALARHTFDHIQ 113
Query: 93 SPNGFIFNTMMRAYIQRNVPQQAI-CLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGK 151
+ + + +N M+ Y + + I C ML++ + D T+P + +A +V +G
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGN 170
Query: 152 LIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNAD 211
IH LK GF DVYV +LI++Y+ + AR LFDE PV D+ SWN++++GY +
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 212 NVEEAKFIYNKMP-----------------------------------ERNIIASNSMIV 236
N +EA + N + E + SN +I
Sbjct: 231 NAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 237 LFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVV 296
L+ G + + ++F M +DL+SW+++I YE NE A+ LF M R+ D +
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 297 VVSVLSACANLTVVKAGTSVHALAVKIGIECY-INLQNALIHMYSSCGEITTAEKLFDAG 355
++S+ S + L ++A SV ++ G I + NA++ MY+
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA--------------- 395
Query: 356 HNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFM 415
K G V+ ARA+F+ + DV+SW+T+ISGYAQ+ SE + ++
Sbjct: 396 ----------------KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 416 EMQHHG-IRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKL 474
M+ G I ++ T VSV+ AC+ AL QG +H + KNGL ++ + T+L DMY K
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 475 GCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVL 534
G +++AL +F+ WN LI +G +K++ +F EM GV P+ ITFV +L
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 535 GACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPD 594
AC H GLVDEG F M ++ + P+ KHYGCMVD+ GRAG L+ A + I+SM + PD
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 595 VATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGM 654
+ WGALL AC+ HG+ ++G+ L E++P+H G+HVLLSN++AS G+W+ V E+R +
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 655 MVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEV 714
+G+ K PG S +E + + F G++THP E+ L + KLK+ GY PD V
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Query: 715 AFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDR 774
D++ +EKE L HSE+LAIAF LI IRI KNLR+C DCH+ KFIS+ +R
Sbjct: 740 LQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITER 799
Query: 775 EIVVRDRHRFHHFKHGSCSCMDFW 798
EI+VRD +RFHHFK+G CSC D+W
Sbjct: 800 EIIVRDSNRFHHFKNGVCSCGDYW 823
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/726 (37%), Positives = 419/726 (57%), Gaps = 41/726 (5%)
Query: 80 EMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQ--QAICLYKLMLNNNVGVDNYTYP-L 136
+M + + F L + + TM+ Y +N+ Q +AI + M+ + +T +
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGY--KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 137 LAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLD 196
LA +A R + GK +H ++K G +V V+N+L+NMYA CGD P++
Sbjct: 153 LASVAATR-CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD-----------PMM- 199
Query: 197 LVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPK 256
AKF++++M R+I + N+MI L + G + A F++M +
Sbjct: 200 -------------------AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 257 KDLVSWSALISCYEQNEMYEEALVLFMNMI-DHRVMVDEVVVVSVLSACANLTVVKAGTS 315
+D+V+W+++IS + Q AL +F M+ D + D + SVLSACANL + G
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 316 VHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFD--AGHNLDLISWNSMISGYLKC 373
+H+ V G + + NALI MYS CG + TA +L + +L + + +++ GY+K
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 374 GSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVI 433
G + +A+ +F ++ ++DVV+W+ MI GY QH + E ++LF M G RP+ TL +++
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 434 SACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTE-EKGV 492
S + L +L GK IH K+G + + LI MY K G + +A F E+
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 493 SSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNS 552
SW ++II A +G A+++LE+F M G+ P+ IT+VGV AC H GLV++G ++F+
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 553 MIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHE 612
M ++ P HY CMVDL GRAG+L+EA+E IE MP+ PDV TWG+LL AC+ H + +
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 613 MGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEAN 672
+G+ +L+ L+P++ G + L+N++++ G+W++ ++R M V K G S IE
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 673 GIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSE 732
+H F D THP+ NEI + ++ ++K GY PDT V D+++E KE L HSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 733 KLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSC 792
KLAIAFGLI+ +RIMKNLR+CNDCHTA KFIS+ REI+VRD RFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 793 SCMDFW 798
SC D+W
Sbjct: 781 SCRDYW 786
Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 250/517 (48%), Gaps = 68/517 (13%)
Query: 148 FEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGY 207
F +L+H V+K+G VY+ N L+N+Y+ G ARKLFDE
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE---------------- 74
Query: 208 VNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALIS 267
MP R + N+++ + ++G++ C F ++P++D VSW+ +I
Sbjct: 75 ---------------MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 268 CYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIEC 327
Y+ Y +A+ + +M+ + + + +VL++ A ++ G VH+ VK+G+
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 328 YINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMI 387
+++ N+L++MY+ CG+ A+ +FD D+ SWN+MI+ +++ G ++ A A F+ M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 388 EKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHG-IRPDEATLVSVISACTHLVALDQGK 446
E+D+V+W++MISG+ Q L +F +M + PD TL SV+SAC +L L GK
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 447 WIHAYIRKNGLKINSIL---------------------------------GTTLIDMYMK 473
IH++I G I+ I+ T L+D Y+K
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 474 LGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGV 533
LG ++ A +F +++ V +W A+I+G+ +G +++ +F M G PN T +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 534 LGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSP 593
L + + G + S ++ + S ++ + +AG + A + +
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITMYAKAGNITSASRAFDLIRCER 478
Query: 594 DVATWGALLGACKKHGDHEMG-ERVGRKLVE-LQPDH 628
D +W +++ A +HG E E L+E L+PDH
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 42/353 (11%)
Query: 299 SVLSACANLTVVKAGTS--------VHALAVKIGIECYINLQNALIHMYSSCGEITTAEK 350
++L C NL S VH +K G+ + L N L+++YS G A K
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 351 LFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSET 410
LFD SWN+++S Y K G ++ FD + ++D VSW+TMI GY Q+ +
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 411 LSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDM 470
+ + +M GI P + TL +V+++ ++ GK +H++I K GL+ N + +L++M
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 471 Y-------------------------------MKLGCVDNALEVFHGTEEKGVSSWNALI 499
Y M++G +D A+ F E+ + +WN++I
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 500 IGFAMNGLADKSLEMFSEM-KKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHR 558
GF G ++L++FS+M + S ++P+ T VL AC ++ + G + +S I
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG-KQIHSHIVTTG 309
Query: 559 LEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSP-DVATWGALLGACKKHGD 610
+ + ++ + R G ++ A LIE + + ALL K GD
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/817 (32%), Positives = 443/817 (54%), Gaps = 77/817 (9%)
Query: 25 KPTINLSILETHLQKC---QSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEM 81
K I+ L + LQ C +S K ++ + + G + D+ S+L T+ E
Sbjct: 89 KWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 82 SYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQAS 141
S ++F ++ +N +M + +I L+K M+++ V +D+YT+ ++++
Sbjct: 149 S---RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 142 ALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWN 201
+ SV G+ +H +LK+GF V N+L+ Y + +ARK+FDE D++SWN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 202 SILAGYVNADNVEEAKFIYNKM-------------------PERNIIA------------ 230
SI+ GYV+ E+ ++ +M + +I+
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 231 --------SNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF 282
N+++ ++ + G++ A +F+EM + +VS++++I+ Y + + EA+ LF
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 283 MNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSC 342
M + + D V +VL+ CA ++ G VH + + I + NAL+ MY+
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA-- 443
Query: 343 GEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYA 402
KCGS+++A +F M KD++SW+T+I GY+
Sbjct: 444 -----------------------------KCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 403 QHDQFSETLSLF-MEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINS 461
++ +E LSLF + ++ PDE T+ V+ AC L A D+G+ IH YI +NG +
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 462 ILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKS 521
+ +L+DMY K G + A +F K + SW +I G+ M+G +++ +F++M+++
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 522 GVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKE 581
G+ +EI+FV +L AC H GLVDEG R FN M E ++EP +HY C+VD+L R G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 582 AEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHAS 641
A IE+MP+ PD WGALL C+ H D ++ E+V K+ EL+P++ G++VL++NI+A
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 642 KGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKK 701
+W+ V +R + +RG+ K PGCS IE G ++ F+AGD ++P+ I+ L ++ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 702 LKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDC 761
+ EGY+P T D ++ EKE L HSEKLA+A G+I+ IR+ KNLR+C DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 762 HTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
H AKF+S+ REIV+RD +RFH FK G CSC FW
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 254/551 (46%), Gaps = 77/551 (13%)
Query: 100 NTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLK 159
NT +R + + + A+ L L ++ +D T + Q A S+ +GK + + +
Sbjct: 65 NTQLRRFCESGNLENAVKL--LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 160 AGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFI 219
GF D + + L MY CGDL A ++FDE + + WN ++ + + + +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 220 YNKM----------------------------------------PERNIIASNSMIVLFG 239
+ KM ERN + NS++ +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYL 241
Query: 240 RKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVS 299
+ V A ++F EM ++D++SW+++I+ Y N + E+ L +F+ M+ + +D +VS
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 300 VLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLD 359
V + CA+ ++ G +VH++ VK N L+ MYS CG++ +A+ +F +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 360 LISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQH 419
++S+ SMI+GY + G ++G E + LF EM+
Sbjct: 362 VVSYTSMIAGYAREG-----------------------LAG--------EAVKLFEEMEE 390
Query: 420 HGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDN 479
GI PD T+ +V++ C LD+GK +H +I++N L + + L+DMY K G +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 480 ALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFS-EMKKSGVTPNEITFVGVLGACR 538
A VF K + SWN +I G++ N A+++L +F+ +++ +P+E T VL AC
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 539 HMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATW 598
+ D+G R + I + + +VD+ + G L A L + + S D+ +W
Sbjct: 511 SLSAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSW 568
Query: 599 GALLGACKKHG 609
++ HG
Sbjct: 569 TVMIAGYGMHG 579
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 236/507 (46%), Gaps = 43/507 (8%)
Query: 162 FDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDL--VSWNSILAGYVNADNVEEAKFI 219
FD V NT + + G+L A KL S D+ + S+L ++ ++++ K +
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 116
Query: 220 YNKMPERN-IIASN---SMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMY 275
N + +I SN + +++ G++ EA R+F E+ + + W+ L++ ++ +
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 276 EEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNAL 335
++ LF M+ V +D V + ++L V G +H +K G ++ N+L
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 336 IHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWS 395
+ Y + +A K+FD D+ISWNS+I+GY+ G EK
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG---------------- 280
Query: 396 TMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKN 455
LS+F++M GI D AT+VSV + C + G+ +H+ K
Sbjct: 281 ---------------LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 456 GLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMF 515
TL+DMY K G +D+A VF ++ V S+ ++I G+A GLA +++++F
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 516 SEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGR 575
EM++ G++P+ T VL C L+DEG R + I+E+ L + ++D+ +
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAK 444
Query: 576 AGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVE---LQPDHDGFH 632
G ++EAE + M + D+ +W ++G K+ + L+E PD
Sbjct: 445 CGSMQEAELVFSEMRV-KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 633 VLLSNIHASKGRWDDVLEVRGMMVRRG 659
+L AS +D E+ G ++R G
Sbjct: 504 CVLPAC-ASLSAFDKGREIHGYIMRNG 529
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/728 (35%), Positives = 401/728 (55%), Gaps = 79/728 (10%)
Query: 114 QAICLYKLMLNNNVGV--DNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNT 171
+A CL +L N G+ D++ L+ A+ + K IH +L G ++
Sbjct: 3 EASCLASPLLYTNSGIHSDSFYASLIDSAT----HKAQLKQIHARLLVLGLQFSGFLITK 58
Query: 172 LINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMP------- 224
LI+ + GD++ AR++FD+ P + WN+I+ GY ++ ++A +Y+ M
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 225 --------------------------------ERNIIASNSMIVLFGRKGNVAEACRLFK 252
+ ++ N +I L+ + + A +F+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 253 --EMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVV 310
+P++ +VSW+A++S Y QN EAL +F M V D V +VSVL+A L +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 311 KAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGY 370
K G S+HA VK+G+E +L LIS N+M Y
Sbjct: 239 KQGRSIHASVVKMGLEIEPDL----------------------------LISLNTM---Y 267
Query: 371 LKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLV 430
KCG V A+ LFD M +++ W+ MISGYA++ E + +F EM + +RPD ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 431 SVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEK 490
S ISAC + +L+Q + ++ Y+ ++ + + + + LIDM+ K G V+ A VF T ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 491 GVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHF 550
V W+A+I+G+ ++G A +++ ++ M++ GV PN++TF+G+L AC H G+V EG F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 551 NSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGD 610
N M +H++ P +HY C++DLLGRAG L +A E+I+ MP+ P V WGALL ACKKH
Sbjct: 448 NRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 611 HEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIE 670
E+GE ++L + P + G +V LSN++A+ WD V EVR M +G+ K GCS +E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 671 ANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRH 730
G + F GD++HP+ EI+ ++ + +LK G+ + D++ EE E TL H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 731 SEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHG 790
SE++AIA+GLI+ P+RI KNLR C +CH A K IS+ DREIVVRD +RFHHFK G
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 791 SCSCMDFW 798
CSC D+W
Sbjct: 687 VCSCGDYW 694
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 233/497 (46%), Gaps = 76/497 (15%)
Query: 45 QFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMR 104
Q QI +++++ GL F ++LI S+ F +++++ ++F L P F +N ++R
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSS---FGDITFARQVFDDLPRPQIFPWNAIIR 92
Query: 105 AYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDS 164
Y + N Q A+ +Y M V D++T+P L +A + + G+ +H V + GFD+
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 165 DVYVNNTLINMYAVCGDLSAARKLFDESPVLD--LVSWNSILAGYVNADNVEEAKFIYNK 222
DV+V N LI +YA C L +AR +F+ P+ + +VSW +I++ Y EA I+++
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 223 M------PE--------------------RNIIASN-------------SMIVLFGRKGN 243
M P+ R+I AS S+ ++ + G
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 244 VAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSA 303
VA A LF +M +L+ W+A+IS Y +N EA+ +F MI+ V D + + S +SA
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 304 CANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISW 363
CA + ++ S++ + + + +ALI M++ CG + A +FD + D++ W
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392
Query: 364 NSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIR 423
++MI G Y H + E +SL+ M+ G+
Sbjct: 393 SAMIVG-------------------------------YGLHGRAREAISLYRAMERGGVH 421
Query: 424 PDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEV 483
P++ T + ++ AC H + +G W + + + +ID+ + G +D A EV
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 484 FHGTE-EKGVSSWNALI 499
+ GV+ W AL+
Sbjct: 482 IKCMPVQPGVTVWGALL 498
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 43/276 (15%)
Query: 41 QSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFN 100
Q KQ I + ++ GL LI +T +++ + +F ++SPN ++N
Sbjct: 236 QDLKQGRSIHASVVKMGL---EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 101 TMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKA 160
M+ Y + ++AI ++ M+N +V D + A A S+ + + ++++V ++
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 161 GFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGY------------- 207
+ DV++++ LI+M+A CG + AR +FD + D+V W++++ GY
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 208 -------VNADN---------------VEEAKFIYNKMPERNIIASNS----MIVLFGRK 241
V+ ++ V E + +N+M + I +I L GR
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 242 GNVAEACRLFKEMPKKDLVS-WSALISCYEQNEMYE 276
G++ +A + K MP + V+ W AL+S +++ E
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/764 (33%), Positives = 435/764 (56%), Gaps = 50/764 (6%)
Query: 47 TQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAY 106
TQ ++++ +G D + +++LI ++ F + + + P + F++++ A
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADL---VLQSIPDPTIYSFSSLIYAL 91
Query: 107 IQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFE-GKLIHDHVLKAGFDSD 165
+ + Q+I ++ M ++ + D++ P L + A LS F+ GK IH +G D D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA-ELSAFKVGKQIHCVSCVSGLDMD 150
Query: 166 VYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPE 225
+V ++ +MY CG + ARK+FD +M +
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFD-------------------------------RMSD 179
Query: 226 RNIIASNSMIVLFGRKGNVAEACRLFKEMP----KKDLVSWSALISCYEQNEMYEEALVL 281
++++ ++++ + RKG + E R+ EM + ++VSW+ ++S + ++ ++EA+V+
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 282 FMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGI---ECYINLQNALIHM 338
F + D+V V SVL + + ++ G +H +K G+ +C I+ A+I M
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS---AMIDM 296
Query: 339 YSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEK----DVVSW 394
Y G + LF+ ++ N+ I+G + G V+KA +F+ E+ +VVSW
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 395 STMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRK 454
+++I+G AQ+ + E L LF EMQ G++P+ T+ S++ AC ++ AL G+ H + +
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 455 NGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEM 514
L N +G+ LIDMY K G ++ + VF+ K + WN+L+ GF+M+G A + + +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 515 FSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLG 574
F + ++ + P+ I+F +L AC +GL DEG ++F M +E+ ++P +HY CMV+LLG
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 575 RAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVL 634
RAG L+EA +LI+ MP PD WGALL +C+ + ++ E KL L+P++ G +VL
Sbjct: 537 RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 596
Query: 635 LSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNM 694
LSNI+A+KG W +V +R M G+ K PGCS I+ ++ LAGD++HPQI++I
Sbjct: 597 LSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEK 656
Query: 695 LDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKN 754
+DE++K+++ G+ P+ D++++E+E L+ HSEKLA+ FGL+ P++++KN
Sbjct: 657 MDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKN 716
Query: 755 LRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
LRIC DCH KFIS REI +RD +RFHHFK G CSC DFW
Sbjct: 717 LRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/644 (38%), Positives = 387/644 (60%), Gaps = 22/644 (3%)
Query: 163 DSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNK 222
D ++ N L++ Y G++ ARK+FD P ++VSW +++ GYV+ V+ A+ ++ K
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 223 MPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF 282
MPE+N ++ M++ F + G + +AC+L++ +P KD ++ +++I + +EA +F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 283 MNMIDHRVMVDEVVVVS------VLSACANLTVVKAGTSVHALAVKIGIECYINLQNALI 336
M + V+ +V V A V+ T V ++ +G
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG------------ 243
Query: 337 HMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWST 396
Y G I AE+LF+ +I+ N+MISG + G + KAR +FD+M E++ SW T
Sbjct: 244 --YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 397 MISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNG 456
+I + ++ E L LF+ MQ G+RP TL+S++S C L +L GK +HA + +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 457 LKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFS 516
++ + + L+ MY+K G + + +F K + WN++I G+A +GL +++L++F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 517 EMKKSGVT-PNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGR 575
EM SG T PNE+TFV L AC + G+V+EG + + SM ++P + HY CMVD+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 576 AGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLL 635
AG EA E+I+SM + PD A WG+LLGAC+ H ++ E +KL+E++P++ G ++LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 636 SNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGD-RTHPQINEIDNM 694
SN++AS+GRW DV E+R +M R V K PGCS E +H F G +HP+ I +
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 695 LDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKN 754
LDE+ L+ GY PD D+D+EEK +L HSE+LA+A+ L+ +S PIR+MKN
Sbjct: 602 LDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKN 661
Query: 755 LRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
LR+C+DCHTA K IS+ +REI++RD +RFHHF++G CSC D+W
Sbjct: 662 LRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 209/461 (45%), Gaps = 64/461 (13%)
Query: 170 NTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNII 229
N I + G + ARKLFD + SWNS++AGY +A+ ++++MP+RNII
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 230 ASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHR 289
+ N ++ + + G + EA ++F MP++++VSW+AL+ Y N + A LF M +
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 290 VMVDEVVVVSVLS------ACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCG 343
+ V+++ L AC ++ ++ + ++IH G
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI--------------ARTSMIHGLCKEG 186
Query: 344 EITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQ 403
+ A ++FD +I+W +M++GY + V+ AR +FD M EK VSW++M+ GY Q
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQ 246
Query: 404 HDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSIL 463
+ + + LF E V + AC ++ S L
Sbjct: 247 NGRIEDAEELF-----------EVMPVKPVIACNAMI--------------------SGL 275
Query: 464 GTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGV 523
G + G + A VF +E+ +SW +I NG ++L++F M+K GV
Sbjct: 276 G--------QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 524 TPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAE 583
P T + +L C + + G + ++ + + + + ++ + + G L +++
Sbjct: 328 RPTFPTLISILSVCASLASLHHG-KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 584 ELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVEL 624
+ + P S D+ W +++ HG +GE + E+
Sbjct: 387 LIFDRFP-SKDIIMWNSIISGYASHG---LGEEALKVFCEM 423
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 171/407 (42%), Gaps = 63/407 (15%)
Query: 230 ASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHR 289
+N I R G + EA +LF K + SW+++++ Y N M +A LF M D
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 290 VMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAE 349
++ N L+ Y GEI A
Sbjct: 79 IIS---------------------------------------WNGLVSGYMKNGEIDEAR 99
Query: 350 KLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSE 409
K+FD +++SW +++ GY+ G V+ A +LF M EK+ VSW+ M+ G+ Q + +
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDD 159
Query: 410 TLSLFMEMQHHGIRPDEATL--VSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTL 467
L+ EM PD+ + S+I +D+ + I + + + I TT+
Sbjct: 160 ACKLY-EMI-----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTM 209
Query: 468 IDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNE 527
+ Y + VD+A ++F EK SW ++++G+ NG + + E+F M V
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV---- 265
Query: 528 ITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEE--- 584
I ++ G + + R F+SM E N + ++ + R G EA +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSM-----KERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 585 LIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGF 631
L++ + P T ++L C G++V +LV Q D D +
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 28/289 (9%)
Query: 80 EMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQ 139
E++ + ++F ++ N + T+++ + + +A+ L+ LM V T+P L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV---RPTFPTLIS 336
Query: 140 ---ASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLD 196
A S+ GK +H +++ FD DVYV + L+ MY CG+L ++ +FD P D
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 197 LVSWNSILAGYVNADNVEEAKFIYNKMP-----ERNIIASNSMIVLFGRKGNVAEACRLF 251
++ WNSI++GY + EEA ++ +MP + N + + + G V E +++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 252 KEMP-----KKDLVSWSALISCYEQNEMYEEALVLFMNMIDH-RVMVDEVVVVSVLSACA 305
+ M K ++ ++ + + EA M MID V D V S+L AC
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEA----MEMIDSMTVEPDAAVWGSLLGACR 512
Query: 306 NLTVVKAGTSVHALAVKIGIE---CYINLQNALIHMYSSCGEITTAEKL 351
+ + ++I E YI L N MY+S G +L
Sbjct: 513 THSQLDVAEFCAKKLIEIEPENSGTYILLSN----MYASQGRWADVAEL 557
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 283/878 (32%), Positives = 458/878 (52%), Gaps = 125/878 (14%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLI-KFSTDLLPFIEMSYSFKIFAFLE-SP 94
L + + +I + +I GL + F + +LI K+S F E + S +F + +
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSH----FREPASSLSVFRRVSPAK 69
Query: 95 NGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIH 154
N +++N+++RA+ + + +A+ Y + + V D YT+P + +A A G L++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 155 DHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVE 214
+ +L GF+SD++V N L++MY+ G L+ AR++FDE PV DLVSWNS+++GY + E
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 215 EAKFIYNKMPERNIIAS----NSMIVLFG-----RKGN---------------------- 243
EA IY+++ I+ +S++ FG ++G
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 244 --------VAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEV 295
+A R+F EM +D VS++ +I Y + EM EE++ +F+ +D + D +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLL 308
Query: 296 VVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAG 355
V SVL AC +L + ++ +K G ++N LI +Y+ CG++ TA +F++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 356 HNLDLISWNSMISGYLKCGSVEKARALFDAMI----EKDVVSWSTMIS------------ 399
D +SWNS+ISGY++ G + +A LF M+ + D +++ +IS
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 400 -----------------------GYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISAC 436
YA+ + ++L +F M D T +VISAC
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWNTVISAC 484
Query: 437 --------------------------THLVALDQ---------GKWIHAYIRKNGLKINS 461
T LV L GK IH + + G +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 462 ILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKS 521
+G LI+MY K GC++N+ VF + V +W +I + M G +K+LE F++M+KS
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 522 GVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKE 581
G+ P+ + F+ ++ AC H GLVDEG F M ++++P +HY C+VDLL R+ + +
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 582 AEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHAS 641
AEE I++MP+ PD + W ++L AC+ GD E ERV R+++EL PD G+ +L SN +A+
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Query: 642 KGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKK 701
+WD V +R + + + K PG S IE +H F +GD + PQ I L+ +
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSL 784
Query: 702 LKLEGYAPDTLEVAFDIDQEEKETTLF-RHSEKLAIAFGLITISPPNPIRIMKNLRICND 760
+ EGY PD EV+ ++++EE++ L HSE+LAIAFGL+ P P+++MKNLR+C D
Sbjct: 785 MAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGD 844
Query: 761 CHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
CH K IS+ REI+VRD +RFH FK G+CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/800 (32%), Positives = 406/800 (50%), Gaps = 73/800 (9%)
Query: 38 QKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGF 97
+K +S + Q+ ++ G +DT+ + L+ L I + IF+ + +
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH---IFSNMSQRDAV 355
Query: 98 IFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHV 157
+NT++ Q ++A+ L+K M + + D+ T L A + ++F G+ +H +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 158 LKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAK 217
K GF S+ + L+N+YA C D+ A F E+ V ++V WN +L Y D++ +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 218 FIYNKM------PER------------------------NIIASN---------SMIVLF 238
I+ +M P + II +N +I ++
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 239 GRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVV 298
+ G + A + KD+VSW+ +I+ Y Q ++AL F M+D + DEV +
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 299 SVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNL 358
+ +SACA L +K G +HA A G + QNAL+ +YS
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS------------------ 637
Query: 359 DLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQ 418
+CG +E++ F+ D ++W+ ++SG+ Q E L +F+ M
Sbjct: 638 -------------RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 419 HHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVD 478
GI + T S + A + + QGK +HA I K G + + LI MY K G +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 479 NALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACR 538
+A + F K SWNA+I ++ +G ++L+ F +M S V PN +T VGVL AC
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 539 HMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATW 598
H+GLVD+G +F SM E+ L P +HY C+VD+L RAG+L A+E I+ MP+ PD W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 599 GALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRR 658
LL AC H + E+GE L+EL+P+ +VLLSN++A +WD R M +
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 659 GVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDI 718
GV K PG S IE IH F GD+ HP +EI ++ K+ GY D + ++
Sbjct: 925 GVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNEL 984
Query: 719 DQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVV 778
E+K+ +F HSEKLAI+FGL+++ PI +MKNLR+CNDCH KF+S+ +REI+V
Sbjct: 985 QHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIV 1044
Query: 779 RDRHRFHHFKHGSCSCMDFW 798
RD +RFHHF+ G+CSC D+W
Sbjct: 1045 RDAYRFHHFEGGACSCKDYW 1064
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 151/643 (23%), Positives = 278/643 (43%), Gaps = 82/643 (12%)
Query: 32 ILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFL 91
+LE L+ S + ++ SQ++ GL ++ + +L F L ++ +FK+F +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF---YLFKGDLYGAFKVFDEM 146
Query: 92 ESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQA---SALRLSVF 148
F +N M++ RN+ + L+ M++ NV + T+ + +A ++ V
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 149 EGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYV 208
E IH +L G V N LI++Y+ G + AR++FD + D SW ++++G
Sbjct: 207 EQ--IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 209 NADNVEEA------KFIYNKMPERNIIAS------------------------------- 231
+ EA ++ MP +S
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 232 --NSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHR 289
N+++ L+ GN+ A +F M ++D V+++ LI+ Q E+A+ LF M
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 290 VMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAE 349
+ D + S++ AC+ + G +HA K+G ++ AL+++Y+ C +I TA
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 350 KLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSE 409
F + +E +VV W+ M+ Y D
Sbjct: 445 DYF------------------------------LETEVE-NVVLWNVMLVAYGLLDDLRN 473
Query: 410 TLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLID 469
+ +F +MQ I P++ T S++ C L L+ G+ IH+ I K ++N+ + + LID
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 470 MYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEIT 529
MY KLG +D A ++ K V SW +I G+ DK+L F +M G+ +E+
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 530 FVGVLGACRHMGLVDEGHR-HFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIES 588
+ AC + + EG + H + + + +V L R G ++E+ E
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVS--GFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 589 MPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGF 631
++A W AL+ ++ G++E RV ++ D++ F
Sbjct: 652 TEAGDNIA-WNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/626 (22%), Positives = 271/626 (43%), Gaps = 79/626 (12%)
Query: 27 TINLSILETHLQKCQ----SFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMS 82
T N L+ C+ +F QI ++++ GL T + LI + F++++
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN-GFVDLA 241
Query: 83 YSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASA 142
++F L + + M+ + +AI L+ M + Y + + A
Sbjct: 242 R--RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 143 LRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNS 202
S+ G+ +H VLK GF SD YV N L+++Y G+L +A +F D V++N+
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 203 ILAGYVNADNVEEAKFIYNKM------PERNIIAS------------------------- 231
++ G E+A ++ +M P+ N +AS
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 232 --------NSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFM 283
+++ L+ + ++ A F E +++V W+ ++ Y + + +F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 284 NMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCG 343
M ++ ++ S+L C L ++ G +H+ +K + + + LI MY+ G
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 344 EITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQ 403
++ TA W+ +I KDVVSW+TMI+GY Q
Sbjct: 540 KLDTA--------------WDILIR-----------------FAGKDVVSWTTMIAGYTQ 568
Query: 404 HDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSIL 463
++ + L+ F +M GIR DE L + +SAC L AL +G+ IHA +G +
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 464 GTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGV 523
L+ +Y + G ++ + F TE +WNAL+ GF +G +++L +F M + G+
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 524 TPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAE 583
N TF + A + +G + +++I + + ++ ++ + + G + +AE
Sbjct: 689 DNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 584 ELIESMPMSPDVATWGALLGACKKHG 609
+ + +V +W A++ A KHG
Sbjct: 748 KQFLEVSTKNEV-SWNAIINAYSKHG 772
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 378 KARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACT 437
K R +F + S++ + ++ + F E +++ GIRP+ TL ++ C
Sbjct: 38 KTRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCL 95
Query: 438 HL-VALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWN 496
+LD+G+ +H+ I K GL N L L D Y+ G + A +VF E+ + +WN
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 497 ALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQE 556
+I A L + +F M VTPNE TF GVL ACR + + ++ I
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 557 HRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKH 608
L ++ ++DL R G + A + + + + D ++W A++ K+
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVAMISGLSKN 266
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/824 (33%), Positives = 423/824 (51%), Gaps = 111/824 (13%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRL 145
K+F + F +NTM+ AY+ P A+ LY M V + ++P L +A A
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDE-SPVLDLVSWNSIL 204
+ G +H ++K G+ S ++ N L++MYA DLSAAR+LFD D V WNSIL
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 205 AGYVNADNVEEAKFIYNKM------PERNIIAS--------------------------- 231
+ Y + E ++ +M P I S
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 232 -------NSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMN 284
N++I ++ R G + +A R+ ++M D+V+W++LI Y QN MY+EAL F +
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 285 MIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGE 344
MI DEV + S+++A L+ + AG +HA +K G + + + N LI MYS C
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 345 ITTAEKLFDAGHNLDLISWNSMISGY-------------------------------LKC 373
+ F H+ DLISW ++I+GY L+
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 374 GSVEKA-------------RALFDAMIEKDVV-------------------------SWS 395
SV K+ + L D +I+ ++V SW+
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 396 TMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKN 455
+MIS A + SE + LF M G+ D L+ ++SA L AL++G+ IH Y+ +
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 456 GLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMF 515
G + + ++DMY G + +A VF E KG+ + ++I + M+G ++E+F
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 516 SEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGR 575
+M+ V+P+ I+F+ +L AC H GL+DEG M E+ LEP +HY C+VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 576 AGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLL 635
A + EA E ++ M P W ALL AC+ H + E+GE ++L+EL+P + G VL+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 636 SNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNML 695
SN+ A +GRW+DV +VR M G+ K PGCS IE +G +H+F A D++HP+ EI L
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 696 DEMAKKLKLE-GYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKN 754
E+ +KL+ E GY DT V ++D+ EK L HSE++AIA+GL+ +RI KN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 755 LRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
LR+C DCHT K +S+ F R+IV+RD +RFHHF+ G CSC D W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/561 (25%), Positives = 244/561 (43%), Gaps = 96/561 (17%)
Query: 125 NNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKA--GFDSDVYVNNTLINMYAVCGDL 182
NN V+ + Y L + R +V +G+ +H + K F+ D ++ L+ MY CG L
Sbjct: 76 NNSPVEAFAYVL--ELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSL 132
Query: 183 SAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM------------PE----- 225
A K+FDE P +WN+++ YV+ A +Y M P
Sbjct: 133 DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Query: 226 ---RNIIAS-------------------NSMIVLFGRKGNVAEACRLFKEMPKK-DLVSW 262
R+I + N+++ ++ + +++ A RLF +K D V W
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 252
Query: 263 SALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVK 322
++++S Y + E L LF M + +VS L+AC + K G +HA +K
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 323 IGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARAL 382
+ H+ +L N++I+ Y +CG + +A +
Sbjct: 313 ------------------------------SSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 383 FDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVAL 442
M DVV+W+++I GY Q+ + E L F +M G + DE ++ S+I+A L L
Sbjct: 343 LRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL 402
Query: 443 DQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGF 502
G +HAY+ K+G N +G TLIDMY K F +K + SW +I G+
Sbjct: 403 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY 462
Query: 503 AMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGAC---RHMGLVDEGHRH------FNSM 553
A N ++LE+F ++ K + +E+ +L A + M +V E H H +++
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV 522
Query: 554 IQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEM 613
IQ +VD+ G+ + A + ES+ DV +W +++ + +G+
Sbjct: 523 IQNE-----------LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESE 570
Query: 614 GERVGRKLVELQPDHDGFHVL 634
+ R++VE D +L
Sbjct: 571 AVELFRRMVETGLSADSVALL 591
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 206/460 (44%), Gaps = 71/460 (15%)
Query: 80 EMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQ 139
+M + +I + + + +N++++ Y+Q + ++A+ + M+ D + +
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 140 ASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVS 199
AS ++ G +H +V+K G+DS++ V NTLI+MY+ C + F DL+S
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 200 WNSILAGYVNADNVEEAKFIYNKMPER--------------------------------- 226
W +++AGY D EA ++ + ++
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514
Query: 227 -----NIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVL 281
+ + N ++ ++G+ N+ A R+F+ + KD+VSW+++IS N EA+ L
Sbjct: 515 RKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 282 FMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSS 341
F M++ + D V ++ +LSA A+L+ + G +H ++ G ++ A++ MY+
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634
Query: 342 CGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGY 401
CG++ +A+ +FD L+ + SMI+ Y G + A LFD
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD----------------- 677
Query: 402 AQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK-WIHAYIRKNGLKIN 460
+M+H + PD + ++++ AC+H LD+G+ ++ + L+
Sbjct: 678 --------------KMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 461 SILGTTLIDMYMKLGCVDNALE-VFHGTEEKGVSSWNALI 499
L+DM + CV A E V E W AL+
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 763
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/721 (35%), Positives = 393/721 (54%), Gaps = 80/721 (11%)
Query: 122 MLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGD 181
M+ ++V D T+ L+ + S+ G+ +H LK G D + V+N+LINMY
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 182 LSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIY--------------------- 220
AR +FD DL+SWNS++AG EA ++
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 221 -NKMPE------------------RNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVS 261
+ +PE + S ++I + R + EA LF E DLV+
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVA 484
Query: 262 WSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAV 321
W+A+++ Y Q+ + L LF M D+ + +V C L + G VHA A+
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 322 KIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARA 381
K +G++LDL + ++ Y+KCG + A+
Sbjct: 545 K-------------------------------SGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 382 LFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVA 441
FD++ D V+W+TMISG ++ + +F +M+ G+ PDE T+ ++ A + L A
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 442 LDQGKWIHAYIRKNGLKIN----SILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNA 497
L+QG+ IHA N LK+N +GT+L+DMY K G +D+A +F E +++WNA
Sbjct: 634 LEQGRQIHA----NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 498 LIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEH 557
+++G A +G ++L++F +MK G+ P+++TF+GVL AC H GLV E ++H SM ++
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 558 RLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERV 617
++P +HY C+ D LGRAG++K+AE LIESM M + + LL AC+ GD E G+RV
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 618 GRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHE 677
KL+EL+P +VLLSN++A+ +WD++ R MM V K PG S IE IH
Sbjct: 810 ATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHI 869
Query: 678 FLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIA 737
F+ DR++ Q I + +M + +K EGY P+T D+++EEKE L+ HSEKLA+A
Sbjct: 870 FVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVA 929
Query: 738 FGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDF 797
FGL++ P PIR++KNLR+C DCH A K+I++ ++REIV+RD +RFH FK G CSC D+
Sbjct: 930 FGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDY 989
Query: 798 W 798
W
Sbjct: 990 W 990
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 263/564 (46%), Gaps = 53/564 (9%)
Query: 81 MSYSFKIFAFLESPNGFIFNTMMRAYIQ------RNVPQQAICLYKLMLNNNVGVDNYTY 134
++Y+ ++F + + +N+++ AY Q N+ QQA L++++ + V T
Sbjct: 90 LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI-QQAFLLFRILRQDVVYTSRMTL 148
Query: 135 PLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPV 194
+ + V+ + H + K G D D +V L+N+Y G + + LF+E P
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 195 LDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGR-KGNVAEACRLFKE 253
D+V WN +L Y+ EEA + + + + + L R G+ ++A ++
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSF 268
Query: 254 MPKKDLVSWSALI------SCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANL 307
D S S +I S Y + Y L F +M++ V D+V + +L+ +
Sbjct: 269 ANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 308 TVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMI 367
+ G VH +A+K+G++ + + N+LI+MY KL G
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYC---------KLRKFGF----------- 368
Query: 368 SGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEA 427
AR +FD M E+D++SW+++I+G AQ+ E + LFM++ G++PD+
Sbjct: 369 -----------ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQY 417
Query: 428 TLVSVISACTHLV-ALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHG 486
T+ SV+ A + L L K +H + K +S + T LID Y + C+ A E+
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFE 476
Query: 487 TEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEG 546
+ +WNA++ G+ + K+L++F+ M K G ++ T V C + +++G
Sbjct: 477 RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 547 HR-HFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGAC 605
+ H ++ + L+ ++D+ + G + A+ +S+P+ DVA W ++ C
Sbjct: 537 KQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593
Query: 606 KKHGDHEMGERV--GRKLVELQPD 627
++G+ E V +L+ + PD
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPD 617
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 48/300 (16%)
Query: 99 FNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVL 158
+N MM Y Q + + + L+ LM D++T + + ++ +GK +H + +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 159 KAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKF 218
K+G+D D++V++ +++MY CGD+SAA+ FD PV D V+W ++++G + E A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 219 IYNKM------PERNIIAS---------------------------------NSMIVLFG 239
++++M P+ IA+ S++ ++
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 240 RKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVS 299
+ G++ +A LFK + ++ +W+A++ Q+ +E L LF M + D+V +
Sbjct: 665 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 300 VLSACANLTVV----KAGTSVHA-LAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDA 354
VLSAC++ +V K S+H +K IE Y L +AL G + AE L ++
Sbjct: 725 VLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL----GRAGLVKQAENLIES 780
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 88 FAF--LESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRL 145
FAF + P+ + TM+ I+ ++A ++ M V D +T LA+AS+
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILA 205
++ +G+ IH + LK +D +V +L++MYA CG + A LF ++++ +WN++L
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 206 GYVNADNVEEAKFIYNKMPERNI 228
G +E ++ +M I
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGI 715
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/755 (34%), Positives = 401/755 (53%), Gaps = 68/755 (9%)
Query: 54 ILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQ 113
++TG I++ F + L+ + +S + K+F + + +N+++ +Y + P+
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCR---SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 114 QAICLYKLMLNN-NVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTL 172
A+ ++ M N DN T + A + GK +H + + +++V N L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 173 INMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASN 232
++MYA CG + +EA +++ M +++++ N
Sbjct: 271 VDMYAKCGMM-------------------------------DEANTVFSNMSVKDVVSWN 299
Query: 233 SMIVLFGRKGNVAEACRLFKEMP----KKDLVSWSALISCYEQNEMYEEALVLFMNMIDH 288
+M+ + + G +A RLF++M K D+V+WSA IS Y Q + EAL + M+
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 289 RVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTA 348
+ +EV ++SVLS CA++ + G +H A+K I+ N
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN------------------ 401
Query: 349 EKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMI--EKDVVSWSTMISGYAQHDQ 406
GH + + N +I Y KC V+ ARA+FD++ E+DVV+W+ MI GY+QH
Sbjct: 402 ------GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 407 FSETLSLFMEM--QHHGIRPDEATLVSVISACTHLVALDQGKWIHAY-IRKNGLKINSIL 463
++ L L EM + RP+ T+ + AC L AL GK IHAY +R + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 464 GTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGV 523
LIDMY K G + +A VF K +W +L+ G+ M+G +++L +F EM++ G
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 524 TPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAE 583
+ +T + VL AC H G++D+G +FN M + P +HY C+VDLLGRAG L A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 584 ELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKG 643
LIE MPM P W A L C+ HG E+GE K+ EL +HDG + LLSN++A+ G
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 644 RWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLK 703
RW DV +R +M +GV K PGCS +E F GD+THP EI +L + +++K
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Query: 704 LEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHT 763
GY P+T D+D EEK+ LF HSEKLA+A+G++T IRI KNLR+C DCHT
Sbjct: 756 DIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHT 815
Query: 764 AAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
A ++SR D +I++RD RFHHFK+GSCSC +W
Sbjct: 816 AFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 166/616 (26%), Positives = 287/616 (46%), Gaps = 94/616 (15%)
Query: 32 ILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFA-F 90
I + KC++ Q I +++ G++ S LI + + +S++ + F
Sbjct: 30 ITPPFIHKCKTISQVKLIHQKLLSFGILTLNLT-SHLI---STYISVGCLSHAVSLLRRF 85
Query: 91 LESPNG-FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFE 149
S G + +N+++R+Y + + L+ LM + + DNYT+P + +A
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKA--------- 136
Query: 150 GKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVN 209
CG++S+ R + + L LV+ G+++
Sbjct: 137 -----------------------------CGEISSVR-CGESAHALSLVT------GFIS 160
Query: 210 ADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCY 269
N+ N+++ ++ R ++++A ++F EM D+VSW+++I Y
Sbjct: 161 -----------------NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 270 EQNEMYEEALVLFMNMIDH-RVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECY 328
+ + AL +F M + D + +V+VL CA+L G +H AV +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 329 INLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAM-- 386
+ + N L+ MY+ CG + A +F D++SWN+M++GY + G E A LF+ M
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 387 --IEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQ 444
I+ DVV+WS ISGYAQ E L + +M GI+P+E TL+SV+S C + AL
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 445 GKWIHAY-------IRKNGLKINSILGTTLIDMYMKLGCVDNALEVFH--GTEEKGVSSW 495
GK IH Y +RKNG +++ LIDMY K VD A +F +E+ V +W
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 496 NALIIGFAMNGLADKSLEMFSEM--KKSGVTPNEITFVGVLGACRHMGLVDEGHR-HFNS 552
+I G++ +G A+K+LE+ SEM + PN T L AC + + G + H +
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA 503
Query: 553 MIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHE 612
+ + P C++D+ + G + +A + ++M M+ + TW +L+ HG E
Sbjct: 504 LRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGE 561
Query: 613 MG-------ERVGRKL 621
R+G KL
Sbjct: 562 EALGIFDEMRRIGFKL 577
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 342/555 (61%), Gaps = 34/555 (6%)
Query: 247 ACRLFKEMPKK-DLVSWSALISCYEQNEMYEEALVLFMNM-IDHRVMVDEVVVVSVLSAC 304
A ++F ++ K ++ W+ LI Y + A L+ M + V D ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 305 ANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWN 364
+ V+ G ++H++ ++ G I +QN+L+H+Y++C
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---------------------- 169
Query: 365 SMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRP 424
G V A +FD M EKD+V+W+++I+G+A++ + E L+L+ EM GI+P
Sbjct: 170 ---------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 425 DEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVF 484
D T+VS++SAC + AL GK +H Y+ K GL N L+D+Y + G V+ A +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 485 HGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKS-GVTPNEITFVGVLGACRHMGLV 543
+K SW +LI+G A+NG +++E+F M+ + G+ P EITFVG+L AC H G+V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 544 DEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLG 603
EG +F M +E+++EP +H+GCMVDLL RAG +K+A E I+SMPM P+V W LLG
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400
Query: 604 ACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKI 663
AC HGD ++ E ++++L+P+H G +VLLSN++AS+ RW DV ++R M+R GV K+
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460
Query: 664 PGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEK 723
PG S++E +HEFL GD++HPQ + I L EM +L+ EGY P V D+++EEK
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 520
Query: 724 ETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHR 783
E + HSEK+AIAF LI+ +PI ++KNLR+C DCH A K +S+ ++REIVVRDR R
Sbjct: 521 ENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Query: 784 FHHFKHGSCSCMDFW 798
FHHFK+GSCSC D+W
Sbjct: 581 FHHFKNGSCSCQDYW 595
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 214/461 (46%), Gaps = 83/461 (18%)
Query: 10 LSSTIKSSVNAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGL-IADTFAASRL 68
+S ++SV P+ + INL L+T+ S + QI + I G+ I+D L
Sbjct: 1 MSPFSETSVLLLPMVEKCINL--LQTY--GVSSITKLRQIHAFSIRHGVSISDAELGKHL 56
Query: 69 IKFSTDLLPFIEMSYSFKIFAFLESP-NGFIFNTMMRAYIQRNVPQQAICLYKLM-LNNN 126
I + L MSY+ K+F+ +E P N FI+NT++R Y + A LY+ M ++
Sbjct: 57 IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL 116
Query: 127 VGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAAR 186
V D +TYP L +A V G+ IH V+++GF S +YV N+L+++YA CGD+++A
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 187 KLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM------PE--------------- 225
K+FD+ P DLV+WNS++ G+ EEA +Y +M P+
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 226 ------------------RNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALIS 267
RN+ +SN ++ L+ R G V EA LF EM K+ VSW++LI
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 268 CYEQNEMYEEALVLFMNMIDHRVMVD-EVVVVSVLSACANLTVVKAGTSVHALAVKIGIE 326
N +EA+ LF M ++ E+ V +L AC+ H VK G E
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGFE 345
Query: 327 CYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAM 386
+ ++ E ++ G +DL++ + G V+KA +M
Sbjct: 346 YFRRMRE----------EYKIEPRIEHFGCMVDLLA---------RAGQVKKAYEYIKSM 386
Query: 387 -IEKDVVSWSTMISGYAQHD-----QFSETLSLFMEMQHHG 421
++ +VV W T++ H +F+ L +E H G
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/757 (35%), Positives = 411/757 (54%), Gaps = 81/757 (10%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRL 145
K+F ++ N + T++ Y + ++ + + L+ M N +++T+ A
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILA 205
G +H V+K G D + V+N+LIN+Y CG++ AR LFD++ V +V+WNS+++
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 206 GYVN--------------------------------ADNVEEAKFI---------YNKMP 224
GY N++E +F Y +
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 225 ERNIIASNSMIVLFGRKGNVAEACRLFKEMP-KKDLVSWSALISCYEQNEMYEEALVLFM 283
++NI +++V + + + +A RLFKE+ ++VSW+A+IS + QN+ EEA+ LF
Sbjct: 329 DQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 284 NMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCG 343
M V +E +L+A L V+ + + VHA VK Y
Sbjct: 387 EMKRKGVRPNEFTYSVILTA---LPVI-SPSEVHAQVVKTN--------------YERSS 428
Query: 344 EITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQ 403
+ TA L DA Y+K G VE+A +F + +KD+V+WS M++GYAQ
Sbjct: 429 TVGTA--LLDA---------------YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 404 HDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVA-LDQGKWIHAYIRKNGLKINSI 462
+ + +F E+ GI+P+E T S+++ C A + QGK H + K+ L +
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 463 LGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSG 522
+ + L+ MY K G +++A EVF EK + SWN++I G+A +G A K+L++F EMKK
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 523 VTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEA 582
V + +TF+GV AC H GLV+EG ++F+ M+++ ++ P +H CMVDL RAG L++A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 583 EELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASK 642
++IE+MP W +L AC+ H E+G K++ ++P+ +VLLSN++A
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 643 GRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKL 702
G W + +VR +M R V K PG S IE + FLAGDR+HP ++I L++++ +L
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 771
Query: 703 KLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCH 762
K GY PDT V DID E KE L +HSE+LAIAFGLI +P+ I+KNLR+C DCH
Sbjct: 772 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCH 831
Query: 763 TAAKFISRAFDREIVVRDRHRFHHFKH-GSCSCMDFW 798
K I++ +REIVVRD +RFHHF G CSC DFW
Sbjct: 832 LVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 245/520 (47%), Gaps = 74/520 (14%)
Query: 150 GKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVN 209
G+ +H +K GF DV V +L++ Y + RK+FDE ++V+W ++++GY
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 210 ADNVEEAKFIYNKMP---------------------------------------ERNIIA 230
+E ++ +M ++ I
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 231 SNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRV 290
SNS+I L+ + GNV +A LF + K +V+W+++IS Y N + EAL +F +M + V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 291 MVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEK 350
+ E SV+ CANL ++ +H VK G N++ AL+ YS C + A +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 351 LFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSET 410
LF + G V +VVSW+ MISG+ Q+D E
Sbjct: 352 LFK------------------EIGCV------------GNVVSWTAMISGFLQNDGKEEA 381
Query: 411 LSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDM 470
+ LF EM+ G+RP+E T +++A + + +HA + K + +S +GT L+D
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDA 437
Query: 471 YMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITF 530
Y+KLG V+ A +VF G ++K + +W+A++ G+A G + +++MF E+ K G+ PNE TF
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 531 VGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMP 590
+L C + F+ + RL+ + ++ + + G ++ AEE+ +
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ- 556
Query: 591 MSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDG 630
D+ +W +++ +HG V +++ + + DG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 38/393 (9%)
Query: 250 LFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTV 309
LF + P +D S+ +L+ + ++ +EA LF+N+ + +D + SVL A L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 310 VKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISG 369
G +H +K G +++ +L+ Y K+FD ++++W ++I
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI-- 166
Query: 370 YLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATL 429
SGYA++ E L+LFM MQ+ G +P+ T
Sbjct: 167 -----------------------------SGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 430 VSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEE 489
+ + +G +H + KNGL + +LI++Y+K G V A +F TE
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 490 KGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRH 549
K V +WN++I G+A NGL ++L MF M+ + V +E +F V+ C ++ + +
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 550 FNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALL-GACKKH 608
S+++ L + MV ML +A L + + +V +W A++ G +
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAML-DALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 609 GDHE---MGERVGRKLVELQPDHDGFHVLLSNI 638
G E + + RK V +P+ + V+L+ +
Sbjct: 377 GKEEAVDLFSEMKRKGV--RPNEFTYSVILTAL 407
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 369 GYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEAT 428
G + + A LFD +D S+ +++ G+++ + E LF+ + G+ D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 429 LVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTE 488
SV+ L G+ +H K G + +GT+L+D YMK + +VF +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 489 EKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHR 548
E+ V +W LI G+A N + D+ L +F M+ G PN TF LG G+ G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG-L 214
Query: 549 HFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKH 608
++++ ++ L+ +++L + G +++A L + + V TW +++ +
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN 273
Query: 609 G 609
G
Sbjct: 274 G 274
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 266/802 (33%), Positives = 429/802 (53%), Gaps = 100/802 (12%)
Query: 53 MILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVP 112
++ TGL+ D F + L+ F F+ + + ++F + N +N+M+R +
Sbjct: 213 VVKTGLVEDVFVGNALVSF-YGTHGFV--TDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 113 QQAICLYKLMLNNN--------VGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDS 164
+++ L M+ N V P+ A+ + L GK +H +K D
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL----GKGVHGWAVKLRLDK 325
Query: 165 DVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGY----------------- 207
++ +NN L++MY+ CG ++ A+ +F + ++VSWN+++ G+
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 208 -----VNADNVE-------------------------EAKFIYNKMPERNIIASNSMIVL 237
V AD V + +F+YN++ +N+ +
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL------VANAFVAS 439
Query: 238 FGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVV 297
+ + G+++ A R+F + K + SW+ALI + Q+ +L + M ++ D V
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 298 VSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHN 357
S+LSAC+ L ++ G VH ++ +E
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLE------------------------------- 528
Query: 358 LDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEM 417
DL + S++S Y+ CG + +ALFDAM +K +VSW+T+I+GY Q+ L +F +M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 418 QHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCV 477
+GI+ +++ V AC+ L +L G+ HAY K+ L+ ++ + +LIDMY K G +
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 478 DNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGAC 537
+ +VF+G +EK +SWNA+I+G+ ++GLA +++++F EM+++G P+++TF+GVL AC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 538 RHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELI-ESMPMSPDVA 596
H GL+ EG R+ + M L+PN KHY C++D+LGRAG L +A ++ E M DV
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 597 TWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMV 656
W +LL +C+ H + EMGE+V KL EL+P+ +VLLSN++A G+W+DV +VR M
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 657 RRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAF 716
+ K GCS IE N + F+ G+R EI ++ + K+ GY PDT+ V
Sbjct: 829 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQH 888
Query: 717 DIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREI 776
D+ +EEK L HSEKLA+ +GLI S IR+ KNLRIC DCH AAK IS+ +REI
Sbjct: 889 DLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREI 948
Query: 777 VVRDRHRFHHFKHGSCSCMDFW 798
VVRD RFHHFK+G CSC D+W
Sbjct: 949 VVRDNKRFHHFKNGVCSCGDYW 970
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 235/532 (44%), Gaps = 76/532 (14%)
Query: 136 LLAQASALRLSVFEGKLIHDHVLKAG-FDSDVYVNNTLINMYAVCGDLSAARKLFDESPV 194
LL QAS R + G+ IH V + +D + +I MYA+CG +R +FD
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 195 LDLVSWNSILAGYVNADNVEEAKFIYNKM-------PE---------------------- 225
+L WN++++ Y + +E + +M P+
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 226 -----------RNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEM 274
++ N+++ +G G V +A +LF MP+++LVSW+++I + N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 275 YEEALVLFMNMI----DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYIN 330
EE+ +L M+ D M D +V+VL CA + G VH AVK+ ++ +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 331 LQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKD 390
L NAL+ MYS CG IT A+ +F +N +++SWN+M+ G+ G FD + +
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH---GTFDVLRQ-- 383
Query: 391 VVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHA 450
M++G ++ DE T+++ + C H L K +H
Sbjct: 384 ------MLAG------------------GEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 451 YIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADK 510
Y K N ++ + Y K G + A VFHG K V+SWNALI G A +
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 511 SLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMV 570
SL+ +MK SG+ P+ T +L AC + + G + + I + LE + Y ++
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG-KEVHGFIIRNWLERDLFVYLSVL 538
Query: 571 DLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLV 622
L G L + L ++M + +W ++ ++G + V R++V
Sbjct: 539 SLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/569 (22%), Positives = 258/569 (45%), Gaps = 79/569 (13%)
Query: 87 IFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNN-NVGVDNYTYPLLAQASALRL 145
+F L S N F +N ++ +Y + + + + + M++ ++ D++TYP + +A A
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILA 205
V G +H V+K G DV+V N L++ Y G ++ A +LFD P +LVSWNS++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 206 GYVNADNVEEAKFIYNKMPERN-------------------------------------- 227
+ + EE+ + +M E N
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 228 -----IIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF 282
++ +N+++ ++ + G + A +FK K++VSW+ ++ + +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 283 MNMI--DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYS 340
M+ V DEV +++ + C + + + + +H ++K + NA + Y+
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441
Query: 341 SCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISG 400
CG ++ A+++F + + SWN+ +I G
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNA-------------------------------LIGG 470
Query: 401 YAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKIN 460
+AQ + +L ++M+ G+ PD T+ S++SAC+ L +L GK +H +I +N L+ +
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 461 SILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKK 520
+ +++ +Y+ G + +F E+K + SWN +I G+ NG D++L +F +M
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 521 SGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLK 580
G+ I+ + V GAC + + G R ++ +H LE ++ ++D+ + G +
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLG-REAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 581 EAEELIESMPMSPDVATWGALLGACKKHG 609
++ ++ + A+W A++ HG
Sbjct: 650 QSSKVFNGLK-EKSTASWNAMIMGYGIHG 677
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 179/400 (44%), Gaps = 36/400 (9%)
Query: 234 MIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHR-VMV 292
+I ++ G+ ++ +F + K+L W+A+IS Y +NE+Y+E L F+ MI ++
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 293 DEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLF 352
D V+ ACA ++ V G +VH L VK G+ + + NAL+ Y + G +T A +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 353 DAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLS 412
D +L+SWNSMI + G E++ L M+E
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME------------------------ 281
Query: 413 LFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYM 472
E PD ATLV+V+ C + GK +H + K L +L L+DMY
Sbjct: 282 ---ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 473 KLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSG--VTPNEITF 530
K GC+ NA +F K V SWN ++ GF+ G + ++ +M G V +E+T
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 531 VGVLGACRHMGLVDE-GHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESM 589
+ + C H + H S+ QE N V + G L A+ + +
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQE--FVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 590 PMSPDVATWGALLGACKKHGDHEMG--ERVGRKLVELQPD 627
S V +W AL+G + D + + K+ L PD
Sbjct: 457 -RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 173/394 (43%), Gaps = 60/394 (15%)
Query: 18 VNAKPI-FKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLL 76
+NA P+ F + S+ E H C S KQ + + L+A+ F AS S
Sbjct: 399 LNAVPVCFHESFLPSLKELH---CYSLKQ------EFVYNELVANAFVASYAKCGS---- 445
Query: 77 PFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPL 136
+SY+ ++F + S +N ++ + Q N P+ ++ + M + + D++T
Sbjct: 446 ----LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 137 LAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLD 196
L A + S+ GK +H +++ + D++V +++++Y CG+L + LFD
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 197 LVSWNSILAGYVNADNVEEAKFIYNKMP-------------------------------- 224
LVSWN+++ GY+ + A ++ +M
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 225 -------ERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEE 277
E + + S+I ++ + G++ ++ ++F + +K SW+A+I Y + + +E
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 681
Query: 278 ALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTS-VHALAVKIGIECYINLQNALI 336
A+ LF M D++ + VL+AC + ++ G + + G++ + +I
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 741
Query: 337 HMYSSCGEITTAEKLF--DAGHNLDLISWNSMIS 368
M G++ A ++ + D+ W S++S
Sbjct: 742 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 278/832 (33%), Positives = 411/832 (49%), Gaps = 136/832 (16%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
++ S Q +Q+IL G D S L K + L + Y+ IF ++ P+
Sbjct: 27 FKRSTSISHLAQTHAQIILHGFRNDI---SLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDH 156
F+FN +MR + P + LSVF H
Sbjct: 84 FLFNVLMRGFSVNESPHSS-----------------------------LSVFA------H 108
Query: 157 VLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEA 216
+ K+ +D+ N++ YA +SAA D+ A V
Sbjct: 109 LRKS---TDLKPNSS---TYAFA--ISAASGFRDD-----------------RAGRVIHG 143
Query: 217 KFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYE 276
+ + + ++ SN ++ ++ + V +A ++F MP+KD + W+ +IS Y +NEMY
Sbjct: 144 QAVVDGCDSELLLGSN-IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 277 EALVLFMNMIDHR-VMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECY------- 328
E++ +F ++I+ +D ++ +L A A L ++ G +H+LA K G CY
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG--CYSHDYVLT 260
Query: 329 --------------------------INLQNALIHMYSSCGEITTAEKLFD--------- 353
I NA+IH Y+S GE + LF
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320
Query: 354 -----------AGHNL------------DLISWNSMISG----YLKCGSVEKARALFDAM 386
+GH + + +S S+ + Y K +E AR LFD
Sbjct: 321 RSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 387 IEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK 446
EK + SW+ MISGY Q+ + +SLF EMQ P+ T+ ++SAC L AL GK
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 447 WIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNG 506
W+H +R + + + T LI MY K G + A +F +K +WN +I G+ ++G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 507 LADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY 566
++L +F EM SG+TP +TF+ VL AC H GLV EG FNSMI + EP+ KHY
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 567 GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQP 626
CMVD+LGRAG L+ A + IE+M + P + W LLGAC+ H D + V KL EL P
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP 620
Query: 627 DHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHP 686
D+ G+HVLLSNIH++ + VR +R + K PG ++IE H F +GD++HP
Sbjct: 621 DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHP 680
Query: 687 QINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPP 746
Q+ EI L+++ K++ GY P+T D+++EE+E + HSE+LAIAFGLI P
Sbjct: 681 QVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPG 740
Query: 747 NPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
IRI+KNLR+C DCHT K IS+ +R IVVRD +RFHHFK G CSC D+W
Sbjct: 741 TEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/670 (37%), Positives = 370/670 (55%), Gaps = 66/670 (9%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
L+KC+ QI +QMI+ GLI D FA+SRLI F L + YS KI +E+PN
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA-LSESRYLDYSVKILKGIENPNI 118
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNV---GVDNYTYPLLAQASALRLSVFEGKLI 153
F +N +R + + P+++ LYK ML + D++TYP+L
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL---------------- 162
Query: 154 HDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNV 213
+ VC DL L S ++ G+V +
Sbjct: 163 ----------------------FKVCADLR-------------LSSLGHMILGHVLKLRL 187
Query: 214 EEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNE 273
E ++N + I +F G++ A ++F E P +DLVSW+ LI+ Y++
Sbjct: 188 ELVSHVHN-----------ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 274 MYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQN 333
E+A+ ++ M V D+V ++ ++S+C+ L + G + + G+ I L N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 334 ALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVS 393
AL+ M+S CG+I A ++FD ++SW +MISGY +CG ++ +R LFD M EKDVV
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 394 WSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIR 453
W+ MI G Q + + L+LF EMQ +PDE T++ +SAC+ L ALD G WIH YI
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 454 KNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLE 513
K L +N LGT+L+DMY K G + AL VFHG + + ++ A+I G A++G A ++
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAIS 476
Query: 514 MFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLL 573
F+EM +G+ P+EITF+G+L AC H G++ G +F+ M L P KHY MVDLL
Sbjct: 477 YFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLL 536
Query: 574 GRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHV 633
GRAG+L+EA+ L+ESMPM D A WGALL C+ HG+ E+GE+ +KL+EL P G +V
Sbjct: 537 GRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
Query: 634 LLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDN 693
LL ++ W+D R MM RGV KIPGCS IE NGI+ EF+ D++ P+ +I +
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Query: 694 MLDEMAKKLK 703
L + + ++
Sbjct: 657 RLHCLGRHMR 666
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 429 LVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDM--YMKLGCVDNALEVFHG 486
L+S++ C L+ L Q I A + NGL ++ + LI + +D ++++ G
Sbjct: 56 LLSLLEKCKLLLHLKQ---IQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 487 TEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVT---PNEITFVGVLGACRHMGLV 543
E + SWN I GF+ + +S ++ +M + G P+ T+ + C + L
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 544 DEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLG 603
GH +++ RLE S + + + G ++ A ++ + P+ D+ +W L+
Sbjct: 173 SLGHMILGHVLK-LRLELVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLIN 230
Query: 604 ACKKHGDHEMGERVGRKLVE---LQPD 627
KK G+ E V KL+E ++PD
Sbjct: 231 GYKKIGEAEKAIYV-YKLMESEGVKPD 256
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/770 (33%), Positives = 416/770 (54%), Gaps = 88/770 (11%)
Query: 85 FKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASA-- 142
+K+F + N +N+++ + + A+ ++ ML+ NV ++T + A +
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 143 -LRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWN 201
+ + GK +H + L+ G + + ++ NTL+ MY G L++++ L DLV+WN
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 202 SILAGYVNADNVEEAKFIYNKM------PERNIIAS------------------------ 231
++L+ + + EA +M P+ I+S
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 232 ----------NSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVL 281
++++ ++ V R+F M + + W+A+I+ Y QNE +EAL+L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 282 FMNMIDHR-VMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYS 340
F+ M + ++ + + V+ AC ++H VK G++ +QN L+ MYS
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 341 SCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISG 400
G+I A + +F M ++D+V+W+TMI+G
Sbjct: 452 RLGKIDIAMR-------------------------------IFGKMEDRDLVTWNTMITG 480
Query: 401 YAQHDQFSETLSLFMEMQHH-----------GIRPDEATLVSVISACTHLVALDQGKWIH 449
Y + + L L +MQ+ ++P+ TL++++ +C L AL +GK IH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 450 AYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLAD 509
AY KN L + +G+ L+DMY K GC+ + +VF +K V +WN +I+ + M+G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 510 KSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCM 569
+++++ M GV PNE+TF+ V AC H G+VDEG R F M ++ +EP+S HY C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 570 VDLLGRAGMLKEAEELIESMPMSPDVA-TWGALLGACKKHGDHEMGERVGRKLVELQPDH 628
VDLLGRAG +KEA +L+ MP + A W +LLGA + H + E+GE + L++L+P+
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 629 DGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQI 688
+VLL+NI++S G WD EVR M +GV K PGCS IE +H+F+AGD +HPQ
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 689 NEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNP 748
++ L+ + ++++ EGY PDT V +++++EKE L HSEKLAIAFG++ SP
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 840
Query: 749 IRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
IR+ KNLR+CNDCH A KFIS+ DREI++RD RFH FK+G+CSC D+W
Sbjct: 841 IRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/629 (25%), Positives = 291/629 (46%), Gaps = 108/629 (17%)
Query: 59 IADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLES------------PNGFIFNT----- 101
+A TF+ + F + LLPF + + + A S P+ FI +
Sbjct: 5 LAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEW 64
Query: 102 ---MMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVL 158
++R+ ++ N+ ++A+ Y M+ + DNY +P L +A A + GK IH HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 159 KAGFDSD-VYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVN-------- 209
K G+ D V V NTL+N+Y CGD A K+FD + VSWNS+++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 210 -------ADNVEEAKFIY-------NKMP-------------------ERNIIASNSMIV 236
+NVE + F + +P E N N+++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 237 LFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVV 296
++G+ G +A + L +DLV+W+ ++S QNE EAL M+ V DE
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 297 VVSVLSACANLTVVKAGTSVHALAVKIG-IECYINLQNALIHMYSSCGEITTAEKLFDAG 355
+ SVL AC++L +++ G +HA A+K G ++ + +AL+ MY +C ++ + ++FD
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 356 HNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFM 415
+ + WN+MI +GY+Q++ E L LF+
Sbjct: 365 FDRKIGLWNAMI-------------------------------AGYSQNEHDKEALLLFI 393
Query: 416 EMQHH-GIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKL 474
M+ G+ + T+ V+ AC A + + IH ++ K GL + + TL+DMY +L
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 475 GCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMK-----------KSGV 523
G +D A+ +F E++ + +WN +I G+ + + +L + +M+ + +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 524 TPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAE 583
PN IT + +L +C + + +G + ++ ++ L + +VD+ + G L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 584 ELIESMPMSPDVATWGALLGACKKHGDHE 612
++ + +P +V TW ++ A HG+ +
Sbjct: 573 KVFDQIPQK-NVITWNVIIMAYGMHGNGQ 600
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 56/298 (18%)
Query: 42 SFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNT 101
+F + I ++ GL D F + L+ + L ++ + +IF +E + +NT
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL---GKIDIAMRIFGKMEDRDLVTWNT 476
Query: 102 MMRAYIQRNVPQQAICLYKLMLNNNVGV-----------DNYTYPLLAQASALRLSVFEG 150
M+ Y+ + A+ L M N V ++ T + + A ++ +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 151 KLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
K IH + +K +DV V + L++MYA CG L +RK+FD+ P ++++WN I+ Y
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 211 DNVEEA------------------------------------KFIYNKMPERNIIASNS- 233
N +EA + Y P+ + S+
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 234 ---MIVLFGRKGNVAEACRLFKEMPK--KDLVSWSALISCYEQNEMYEEALVLFMNMI 286
++ L GR G + EA +L MP+ +WS+L+ + E + N+I
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/708 (35%), Positives = 385/708 (54%), Gaps = 39/708 (5%)
Query: 98 IFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHV 157
++N M+ + N AI L+ M + DN+T+ + AL ++ E + + H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLAL-VADDEKQCVQFHA 173
Query: 158 --LKAGFDSDVYVNNTLINMYAVCGD----LSAARKLFDESPVLDLVSWNSILAGYVNAD 211
LK+G V+N L+++Y+ C L +ARK+FDE D SW +++ GYV
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV--- 230
Query: 212 NVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQ 271
K Y + E +L G N+ LV+++A+IS Y
Sbjct: 231 -----KNGYFDLGEE---------LLEGMDDNM-------------KLVAYNAMISGYVN 263
Query: 272 NEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINL 331
Y+EAL + M+ + +DE SV+ ACA +++ G VHA ++ + +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322
Query: 332 QNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDV 391
N+L+ +Y CG+ A +F+ DL+SWN+++SGY+ G + +A+ +F M EK++
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 392 VSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAY 451
+SW MISG A++ E L LF M+ G P + I +C L A G+ HA
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 452 IRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKS 511
+ K G + G LI MY K G V+ A +VF SWNALI +G ++
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 512 LEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVD 571
++++ EM K G+ P+ IT + VL AC H GLVD+G ++F+SM +R+ P + HY ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 572 LLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGF 631
LL R+G +AE +IES+P P W ALL C+ HG+ E+G KL L P+HDG
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 632 HVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEI 691
++LLSN+HA+ G+W++V VR +M RGV K CS IE +H FL D +HP+ +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 692 DNMLDEMAKKLKLEGYAPDTLEVAFDIDQE-EKETTLFRHSEKLAIAFGLITISPPNPIR 750
L ++ K+++ GY PDT V D++ + KE L HSEK+A+AFGL+ + P IR
Sbjct: 683 YIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742
Query: 751 IMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
I KNLR C DCH +F+S R+I++RDR RFHHF++G CSC +FW
Sbjct: 743 IFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 227/507 (44%), Gaps = 77/507 (15%)
Query: 144 RLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSI 203
R S+ + +H +++ GF ++ N LI++Y +L+ AR+LFDE D ++ ++
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 204 LAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWS 263
++GY + ++ A+ ++ K P + +D V ++
Sbjct: 87 VSGYCASGDITLARGVFEKAP-----------------------------VCMRDTVMYN 117
Query: 264 ALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVV----KAGTSVHAL 319
A+I+ + N A+ LF M D SVL A L +V K HA
Sbjct: 118 AMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAA 174
Query: 320 AVKIGIECYINLQNALIHMYSSCGE----ITTAEKLFDAGHNLDLISWNSMISGYLKCGS 375
A+K G ++ NAL+ +YS C + +A K+FD D SW +M++GY+K G
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 376 VEKARALFDAMIEK-DVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVIS 434
+ L + M + +V+++ MISGY + E L + M GI DE T SVI
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 435 ACTHLVALDQGKWIHAYI-RKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVS 493
AC L GK +HAY+ R+ + +L+ +Y K G D A +F K +
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFH--FDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 494 SWNALIIGF-------------------------------AMNGLADKSLEMFSEMKKSG 522
SWNAL+ G+ A NG ++ L++FS MK+ G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 523 VTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEA 582
P + F G + +C +G G + +++ + + + + ++ + + G+++EA
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNG-QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 583 EELIESMPMSPDVATWGALLGACKKHG 609
++ +MP D +W AL+ A +HG
Sbjct: 472 RQVFRTMP-CLDSVSWNALIAALGQHG 497
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 87 IFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLS 146
IF ++ N + M+ + ++ + L+ M +Y + ++ A+ +
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 147 VFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAG 206
G+ H +LK GFDS + N LI MYA CG + AR++F P LD VSWN+++A
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 207 YVNADNVEEAKFIYNKMPERNI 228
+ EA +Y +M ++ I
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGI 514
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/766 (32%), Positives = 411/766 (53%), Gaps = 73/766 (9%)
Query: 39 KCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFI 98
+ +S Q Q+ +Q I T ++ T +AS +I T+L E FK L+SP
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKT---LKSPPVLA 72
Query: 99 FNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVL 158
+ +++R + +++ +A+ + M + D+ +P + ++ + + + G+ +H ++
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 159 KAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKF 218
+ G D D+Y N L+NMYA KL + ++ NV
Sbjct: 133 RLGMDCDLYTGNALMNMYA---------KLLG-------------MGSKISVGNV----- 165
Query: 219 IYNKMPERNI------IASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQN 272
+++MP+R + + + I+ FG + R+F+ MP+KD+VS++ +I+ Y Q+
Sbjct: 166 -FDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 273 EMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQ 332
MYE+AL + M + D + SVL + V G +H ++ GI+ + +
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 280
Query: 333 NALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVV 392
++L+ MY+ K +E + +F + +D +
Sbjct: 281 SSLVDMYA-------------------------------KSARIEDSERVFSRLYCRDGI 309
Query: 393 SWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYI 452
SW+++++GY Q+ +++E L LF +M ++P SVI AC HL L GK +H Y+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 453 RKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSL 512
+ G N + + L+DMY K G + A ++F SW A+I+G A++G +++
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 513 EMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDL 572
+F EMK+ GV PN++ FV VL AC H+GLVDE +FNSM + + L +HY + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 573 LGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFH 632
LGRAG L+EA I M + P + W LL +C H + E+ E+V K+ + ++ G +
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 633 VLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEID 692
VL+ N++AS GRW ++ ++R M ++G+ K P CS IE H F++GDR+HP +++I+
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 609
Query: 693 NMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIM 752
L + ++++ EGY DT V D+D+E K LF HSE+LA+AFG+I P IR+
Sbjct: 610 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 669
Query: 753 KNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
KN+RIC DCH A KFIS+ +REI+VRD RFHHF G+CSC D+W
Sbjct: 670 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/652 (38%), Positives = 373/652 (57%), Gaps = 48/652 (7%)
Query: 164 SDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA----------DNV 213
+DV+ N++I A GD + A F L L S + A
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 214 EEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNE 273
+ F++ + +I S+++IV++ G + +A ++F E+PK+++VSW+++I Y+ N
Sbjct: 99 HQQAFVFGY--QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 274 MYEEALVLFMNMI------DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIEC 327
+A+ LF +++ D + +D + +VSV+SAC+ + S+H+ +K G +
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 328 YINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMI 387
+++ N L+ Y+ GE G V AR +FD ++
Sbjct: 217 GVSVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIV 247
Query: 388 EKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEA-TLVSVISACTHLVALDQGK 446
+KD VS+++++S YAQ +E +F + + + A TL +V+ A +H AL GK
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 447 WIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNG 506
IH + + GL+ + I+GT++IDMY K G V+ A + F + K V SW A+I G+ M+G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 507 LADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY 566
A K+LE+F M SGV PN ITFV VL AC H GL EG R FN+M +EP +HY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 567 GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQP 626
GCMVDLLGRAG L++A +LI+ M M PD W +LL AC+ H + E+ E +L EL
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 627 DHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHP 686
+ G+++LLS+I+A GRW DV VR +M RG+VK PG S++E NG +H FL GD HP
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 687 QINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPP 746
Q +I L E+ +KL GY +T V D+D+EEKE TL HSEKLAIAFG++ P
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 747 NPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
+ + ++KNLR+C+DCH K IS+ DRE VVRD RFHHFK G CSC D+W
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 223/498 (44%), Gaps = 114/498 (22%)
Query: 90 FLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFE 149
+++ + F +N+++ + +A+ + M ++ ++P +A + +F
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 150 GKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGY-- 207
GK H G+ SD++V++ LI MY+ CG L ARK+FDE P ++VSW S++ GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 208 ---------------VNADNVEEAKFI-----------YNKMP----------------- 224
V+ ++ ++A F+ +++P
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 225 ERNIIASNSMIVLF--GRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF 282
+R + N+++ + G +G VA A ++F ++ KD VS+++++S Y Q+ M EA +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 283 MNMIDHRVMV-DEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSS 341
++ ++V+ + + + +VL A ++ ++ G +H +++G+E + + ++I MY
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 342 CGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGY 401
CG + TA K FD N ++ SW +MI+GY G KA LF AMI+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS------------ 382
Query: 402 AQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHL-VALDQGKWIHAYIRKNGLKIN 460
G+RP+ T VSV++AC+H + ++ +W +A + G+
Sbjct: 383 -------------------GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV--- 420
Query: 461 SILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKK 520
E G+ + ++ G K+ ++ MK
Sbjct: 421 ----------------------------EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK- 451
Query: 521 SGVTPNEITFVGVLGACR 538
+ P+ I + +L ACR
Sbjct: 452 --MKPDSIIWSSLLAACR 467
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 21/233 (9%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDN---YTYPLLA--QA 140
KIF + + +N++M Y Q + +A +++ ++ N V N + LLA +
Sbjct: 241 KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHS 300
Query: 141 SALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSW 200
ALR+ GK IHD V++ G + DV V ++I+MY CG + ARK FD ++ SW
Sbjct: 301 GALRI----GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 201 NSILAGYVNADNVEEAKFIYNKMPER----NIIASNSMIVLFGRKGNVAEACRLFKEMPK 256
+++AGY + +A ++ M + N I S++ G E R F M
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 257 K-----DLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSAC 304
+ L + ++ + ++A L M ++ D ++ S+L+AC
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAAC 466
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 487 TEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEG 546
++ V SWN++I A +G + ++L FS M+K + P +F + AC + + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 547 HR-HFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGAC 605
+ H + + ++ + ++ + G L++A ++ + +P ++ +W +++
Sbjct: 96 KQTHQQAFVFGYQSDIFVS--SALIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSMIRGY 152
Query: 606 KKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPG 665
+G+ + + L+ + D DD + + M + V I
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDD-----------------DDAMFLDSMGL---VSVISA 192
Query: 666 CSMIEANGI---IHEFLAGDRTHPQINEIDNMLDEMAK 700
CS + A G+ IH F+ ++ + +LD AK
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 376/653 (57%), Gaps = 24/653 (3%)
Query: 170 NTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNII 229
N++++ Y G AR+LFDE ++VSWN +++GY+ + EA+ ++ MPERN++
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 230 ASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLF------- 282
+ +M+ + ++G V EA LF MP+++ VSW+ + + ++A L+
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 283 ----MNMI----------DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALA--VKIGIE 326
NMI + R++ DE+ +V++ +T + V ++ E
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 327 CYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAM 386
+++ Y+ G I AE+ F+ +I+ N+MI G+ + G + KAR +FD M
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 387 IEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK 446
++D +W MI Y + E L LF +MQ G+RP +L+S++S C L +L G+
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 447 WIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNG 506
+HA++ + + + + L+ MY+K G + A VF K + WN++I G+A +G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 507 LADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY 566
L +++L++F EM SG PN++T + +L AC + G ++EG F SM + + P +HY
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471
Query: 567 GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQP 626
C VD+LGRAG + +A ELIESM + PD WGALLGACK H ++ E +KL E +P
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEP 531
Query: 627 DHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGD-RTH 685
D+ G +VLLS+I+AS+ +W DV VR M V K PGCS IE +H F G + H
Sbjct: 532 DNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNH 591
Query: 686 PQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISP 745
P+ I ML++ L+ GY+PD V D+D+EEK +L RHSE+LA+A+GL+ +
Sbjct: 592 PEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPE 651
Query: 746 PNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
PIR+MKNLR+C DCH A K IS+ +REI++RD +RFHHF +G CSC D+W
Sbjct: 652 GVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 37/355 (10%)
Query: 147 VFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAG 206
V E +LI D + + +V T+I Y + ARKLF+ P VSW S+L G
Sbjct: 188 VDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG 243
Query: 207 YVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALI 266
Y + +E+A+ + MP + +IA N+MIV FG G +++A R+F M +D +W +I
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 267 SCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIE 326
YE+ EAL LF M V ++S+LS CA L ++ G VHA V+ +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 327 CYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAM 386
+ + + L+ MY CGE+ A+ +FD + D+I WNS+ISG
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG----------------- 406
Query: 387 IEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK 446
YA H E L +F EM G P++ TL+++++AC++ L++G
Sbjct: 407 --------------YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 447 WIHAYIRKNGLKINSILG-TTLIDMYMKLGCVDNALEVFHG-TEEKGVSSWNALI 499
I + ++ + +DM + G VD A+E+ T + + W AL+
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 24/295 (8%)
Query: 336 IHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWS 395
I S G+I A K FD+ + SWNS++SGY G ++AR LFD M E++VVSW+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 396 TMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKN 455
++SGY ++ E ++F M + + +++ + + + + + +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 456 GLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMF 515
N + T + + G +D A +++ K V + +I G G D++ +F
Sbjct: 140 ----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 516 SEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGR 575
EM++ V +T+ ++ R VD + F M ++ + S G +
Sbjct: 196 DEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL----- 246
Query: 576 AGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGE-RVGRKLVELQPDHD 629
+G +++AEE E MPM P +A ++G E+GE R++ +L D D
Sbjct: 247 SGRIEDAEEFFEVMPMKPVIACNAMIVGF------GEVGEISKARRVFDLMEDRD 295
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 12/234 (5%)
Query: 80 EMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQ 139
E+S + ++F +E + + M++AY ++ +A+ L+ M V + +
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 140 ASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVS 199
A S+ G+ +H H+++ FD DVYV + L+ MY CG+L A+ +FD D++
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 200 WNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLF----GRKGNVAEACRLFKEMP 255
WNSI++GY + EEA I+++MP + + ++ G + E +F+ M
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Query: 256 KKDLVS-----WSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSAC 304
K V+ +S + + ++A+ L +M + D V ++L AC
Sbjct: 460 SKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGAC 510
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 452 IRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKS 511
+R+ L + + I ++G ++ A + F + K + SWN+++ G+ NGL ++
Sbjct: 8 LRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA 67
Query: 512 LEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVD 571
++F EM + V +++ G++ ++ E F M E N + MV
Sbjct: 68 RQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVK 118
Query: 572 LLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHD 629
+ GM+ EAE L MP +V +W + G G + RKL ++ P D
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEV-SWTVMFGGLIDDGRIDK----ARKLYDMMPVKD 171
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 332/598 (55%), Gaps = 42/598 (7%)
Query: 243 NVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLS 302
+VA A ++F E+P+++++ + +I Y N Y E + +F M V D VL
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 303 ACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLIS 362
AC+ + G +H A K+G+ + + N L+ MY CG ++ A + D D++S
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 363 WNSMISGYLK----------CGSVEKARALFDA--------------------------- 385
WNS++ GY + C +E + DA
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFK 268
Query: 386 MIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQG 445
M +K +VSW+ MI Y ++ E + L+ M+ G PD ++ SV+ AC AL G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 446 KWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMN 505
K IH YI + L N +L LIDMY K GC++ A +VF + + V SW A+I + +
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 506 GLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKH 565
G ++ +FS+++ SG+ P+ I FV L AC H GL++EG F M +++ P +H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 566 YGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQ 625
CMVDLLGRAG +KEA I+ M M P+ WGALLGAC+ H D ++G KL +L
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 626 PDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTH 685
P+ G++VLLSNI+A GRW++V +R +M +G+ K PG S +E N IIH FL GDR+H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 686 PQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISP 745
PQ +EI LD + KK+K GY PD+ D+++E+KET L HSEKLAI F L+
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 746 P-----NPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
N IRI KNLRIC DCH AAK IS+ REI++RD +RFH F+ G CSC D+W
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 247/563 (43%), Gaps = 77/563 (13%)
Query: 26 PTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSF 85
P + +L L + + S++IL L ++ +L++ L +++ +
Sbjct: 38 PQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLK---DVASAR 94
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRL 145
K+F + N I N M+R+Y+ + + ++ M NV D+YT+P + +A +
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILA 205
++ G+ IH K G S ++V N L++MY CG LS AR + DE D+VSWNS++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 206 GYVNADNVEEAKFIYNKMPERNI------IASNSMIVLFGRKGNVAEACRLFKEMPKKDL 259
GY ++A + +M I +AS V NV +F +M KK L
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 260 VSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHAL 319
VSW+ +I Y +N M EA+ L+ M D V + SVL AC + + + G +H
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 320 AVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKA 379
+ + + L+NALI MY+ CG + A +F+ + D++SW +MIS Y
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY--------- 385
Query: 380 RALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHL 439
G++ + + ++LF ++Q G+ PD V+ ++AC+H
Sbjct: 386 --------------------GFS--GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 440 VALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALI 499
L++G+ + + KI L L C+ + L
Sbjct: 424 GLLEEGRSCFKLM-TDHYKITPRL--------EHLACMVDLL------------------ 456
Query: 500 IGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRL 559
G A K E + ++ + PNE + +LGACR D G + + Q L
Sbjct: 457 ------GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ---L 507
Query: 560 EP-NSKHYGCMVDLLGRAGMLKE 581
P S +Y + ++ +AG +E
Sbjct: 508 APEQSGYYVLLSNIYAKAGRWEE 530
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 6/255 (2%)
Query: 366 MISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPD 425
++ Y V AR +FD + E++V+ + MI Y + + E + +F M +RPD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 426 EATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFH 485
T V+ AC+ + G+ IH K GL +G L+ MY K G + A V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 486 GTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDE 545
+ V SWN+L++G+A N D +LE+ EM+ ++ + T +L A + E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 546 GHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMP---MSPDVATWGALL 602
+ M + + + + M+ + + M EA EL M PD + ++L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 603 GACKKHGDHEMGERV 617
AC +G+++
Sbjct: 317 PACGDTSALSLGKKI 331
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 31/311 (9%)
Query: 405 DQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILG 464
DQ S ++F+ Q PD TL + +H+ I L+ NS LG
Sbjct: 34 DQKSPQETVFLLGQVLDTYPDIRTL----------------RTVHSRIILEDLRCNSSLG 77
Query: 465 TTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVT 524
L+ Y L V +A +VF E+ V N +I + NG + +++F M V
Sbjct: 78 VKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 525 PNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEE 584
P+ TF VL AC G + G R + + L +V + G+ G L EA
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIG-RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 585 LIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGR 644
+++ M DV +W +L+ ++ + V R++ ++ HD + S
Sbjct: 197 VLDEMSRR-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 645 WDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKL 704
++V+ V+ M + G S++ N +I ++ N + E+ +++
Sbjct: 256 TENVMYVKDMFFKMGKK-----SLVSWNVMIGVYMK--------NAMPVEAVELYSRMEA 302
Query: 705 EGYAPDTLEVA 715
+G+ PD + +
Sbjct: 303 DGFEPDAVSIT 313
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 352/582 (60%), Gaps = 18/582 (3%)
Query: 231 SNSMIVLFGRKGNVAEACRLFKEMP--KKDLVSWSALISCYEQNEMYEEALVLFMNMIDH 288
SN++ + G + A +LF E+P +KD V W+ L+S + + + ++ LF+ M
Sbjct: 46 SNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK 105
Query: 289 RVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTA 348
RV +D+V VV + CA L + H +AVK+G+ + + NAL+ MY CG ++
Sbjct: 106 RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 349 EKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFS 408
+++F+ ++SW ++ +K +E+ R +F M E++ V+W+ M++GY
Sbjct: 166 KRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 409 ETLSLFMEMQH---HGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINS---- 461
E L L EM HG+ + TL S++SAC L G+W+H Y K + +
Sbjct: 226 EVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 462 ---ILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEM 518
++GT L+DMY K G +D+++ VF ++ V +WNAL G AM+G ++MF +M
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Query: 519 KKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGM 578
+ V P+++TF VL AC H G+VDEG R F+S+ + + LEP HY CMVDLLGRAG+
Sbjct: 344 IRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGL 401
Query: 579 LKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNI 638
++EAE L+ MP+ P+ G+LLG+C HG E+ ER+ R+L+++ P + + +L+SN+
Sbjct: 402 IEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461
Query: 639 HASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEM 698
+ ++GR D +RG + +RG+ KIPG S I N +H F +GDR+HP+ EI L+E+
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 699 AKKLKLEGYAPDT--LEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLR 756
++++ GY PD L + D EEKE L HSEKLA+ FGL+ P P+ + KNLR
Sbjct: 522 IERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLR 581
Query: 757 ICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
IC DCH+A K +S+ +DREI++RDR+RFH FK GSCSC D+W
Sbjct: 582 ICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 190/475 (40%), Gaps = 106/475 (22%)
Query: 99 FNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVL 158
+ T++ ++ + + ++ L+ M V +D+ + L A + + H +
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 159 KAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKF 218
K G + V V N L++MY CG +S +++F+E +VSW +L V + +E +
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 219 IYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEA 278
++++MPERN +A M+ + G E L EM + C
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM----------VFRCGHG------- 241
Query: 279 LVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVK----IGIECY---INL 331
++ V + S+LSACA + G VH A+K +G E + +
Sbjct: 242 -------------LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMV 288
Query: 332 QNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDV 391
AL+ MY+ CG I ++ +F ++++WN ALF
Sbjct: 289 GTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWN----------------ALF-------- 324
Query: 392 VSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAY 451
SG A H + + +F +M ++PD+ T +V+SAC+H +D+G
Sbjct: 325 -------SGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 452 IRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKS 511
+R F+G E K V + ++ GL +++
Sbjct: 377 LR------------------------------FYGLEPK-VDHYACMVDLLGRAGLIEEA 405
Query: 512 LEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY 566
+ EM V PNE+ +LG+C G V+ R +IQ + P + Y
Sbjct: 406 EILMREMP---VPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ---MSPGNTEY 454
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 71/378 (18%)
Query: 300 VLSACANLTVVKAGTSVHALAVKIGIECYIN--LQNALIHMYSSCGEITTAEKLFDAGHN 357
+L CA+ + ++ G +HA+ G++ L NAL Y+S GE+ TA+KLFD
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE--- 68
Query: 358 LDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEM 417
+ EKD V W+T++S ++++ ++ LF+EM
Sbjct: 69 --------------------------IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 418 QHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCV 477
+ + D+ ++V + C L L + H K G+ + + L+DMY K G V
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 478 -------------------------------DNALEVFHGTEEKGVSSWNALIIGFAMNG 506
+ EVFH E+ +W ++ G+ G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 507 LADKSLEMFSEMK-KSGVTPNEITFVGVLGACRHMG-LVDEGHRHFNSMIQEHRLEPNSK 564
+ LE+ +EM + G N +T +L AC G LV H ++ +E + +
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 565 HYGCM-----VDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGR 619
+ M VD+ + G + + + M +V TW AL HG M +
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLM-RKRNVVTWNALFSGLAMHGKGRMVIDMFP 341
Query: 620 KLV-ELQPDHDGFHVLLS 636
+++ E++PD F +LS
Sbjct: 342 QMIREVKPDDLTFTAVLS 359
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 39 KCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFI 98
KC + +I ++ +++ T ++K+ + ++F + N
Sbjct: 158 KCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG-------LERGREVFHEMPERNAVA 210
Query: 99 FNTMMRAYIQRNVPQQAI-CLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHV 157
+ M+ Y+ ++ + L +++ G++ T + A A ++ G+ +H +
Sbjct: 211 WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYA 270
Query: 158 LK--------AGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVN 209
LK A +D DV V L++MYA CG++ ++ +F ++V+WN++ +G
Sbjct: 271 LKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 210 ADNVEEAKFIYNKMPE--RNI----IASNSMIVLFGRKGNVAEACRLFKEM------PKK 257
+ + + + P+ R + + +++ G V E R F + PK
Sbjct: 330 HG---KGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKV 386
Query: 258 DLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACA 305
D ++ ++ + + EEA +L M V +EVV+ S+L +C+
Sbjct: 387 D--HYACMVDLLGRAGLIEEAEILMREM---PVPPNEVVLGSLLGSCS 429
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/635 (37%), Positives = 364/635 (57%), Gaps = 34/635 (5%)
Query: 165 DVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMP 224
DV N++I+ CGD++ A KLFDE P +VSW +++ G + V++A+ ++ +MP
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 225 ERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMN 284
++ A NSM+ + + G V +A +LFK+MP K+++SW+ +I +QNE EAL LF N
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 285 MIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGE 344
M+ + V++ACAN G VH L +K+G L Y S
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF---------LYEEYVSA-- 264
Query: 345 ITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQH 404
S+I+ Y C + +R +FD + + V W+ ++SGY+ +
Sbjct: 265 --------------------SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 405 DQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILG 464
+ + LS+F M + I P+++T S +++C+ L LD GK +H K GL+ ++ +G
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 465 TTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVT 524
+L+ MY G V++A+ VF +K + SWN++I+G A +G + +F +M +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 525 PNEITFVGVLGACRHMGLVDEGHRHFNSMIQE-HRLEPNSKHYGCMVDLLGRAGMLKEAE 583
P+EITF G+L AC H G +++G + F M + ++ +HY CMVD+LGR G LKEAE
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 584 ELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKG 643
ELIE M + P+ W ALL AC+ H D + GE+ + L +VLLSNI+AS G
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 644 RWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLK 703
RW +V ++R M + G++K PG S + G HEF +GD+ P + I L+ + +KLK
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLK 602
Query: 704 LEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHT 763
GYAPD D++ E+KE L+ HSE+LAIAFGLI + + +MKNLR+C DCHT
Sbjct: 603 ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHT 662
Query: 764 AAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
K IS REIV+RD RFHHFK+G+CSC D+W
Sbjct: 663 VIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 45/437 (10%)
Query: 203 ILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSW 262
++ ++ + ++EA+ ++N++P ++ MI + R + +A LF EMP +D+VSW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 263 SALIS-CYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAV 321
+++IS C E +M A+ LF DE+ SV+S
Sbjct: 101 NSMISGCVECGDM-NTAVKLF----------DEMPERSVVS------------------- 130
Query: 322 KIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARA 381
A+++ G++ AE+LF D +WNSM+ GYL+ G V+ A
Sbjct: 131 ----------WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 382 LFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVA 441
LF M K+V+SW+TMI G Q+++ E L LF M I+ VI+AC + A
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 442 LDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIG 501
G +H I K G + +LI Y + ++ +VF + V+ W AL+ G
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 502 FAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEP 561
+++N + +L +FS M ++ + PN+ TF L +C +G +D G + + + + LE
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLET 359
Query: 562 NSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKL 621
++ +V + +G + +A + + + +W +++ C +HG + + ++
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 622 VEL--QPDHDGFHVLLS 636
+ L +PD F LLS
Sbjct: 419 IRLNKEPDEITFTGLLS 435
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 186/425 (43%), Gaps = 48/425 (11%)
Query: 59 IADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICL 118
+ DT A + ++ L F ++ + K+F + N + TM+ Q +A+ L
Sbjct: 156 VKDTAAWNSMVH---GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 119 YKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAV 178
+K ML + + + + A A + G +H ++K GF + YV+ +LI YA
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 179 CGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM------PERNIIAS- 231
C + +RK+FDE + W ++L+GY E+A I++ M P ++ AS
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 232 --------------------------------NSMIVLFGRKGNVAEACRLFKEMPKKDL 259
NS++V++ GNV +A +F ++ KK +
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 260 VSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSV-HA 318
VSW+++I Q+ + A V+F MI DE+ +LSAC++ ++ G + +
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 319 LAVKIG-IECYINLQNALIHMYSSCGEITTAEKLFDAG-HNLDLISWNSMISGYLKCGSV 376
++ I I+ I ++ + CG++ AE+L + + + W +++S V
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDV 512
Query: 377 ---EKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVI 433
EKA A + K ++ + + YA ++S L ++M+ +GI + VI
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Query: 434 SACTH 438
H
Sbjct: 573 RGKKH 577
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/646 (38%), Positives = 367/646 (56%), Gaps = 41/646 (6%)
Query: 155 DHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYV-NADNV 213
D++ K ++ N +I GD+ A ++F + ++WNS+L G + +
Sbjct: 50 DYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM 109
Query: 214 EEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNE 273
EA +++++PE + + N M+ + R N +A F MP KD SW+ +I+ Y +
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 274 MYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQN 333
E+A LF +M++ +EV N
Sbjct: 170 EMEKARELFYSMMEK----NEVS-----------------------------------WN 190
Query: 334 ALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALF-DAMIEKDVV 392
A+I Y CG++ A F +++W +MI+GY+K VE A A+F D + K++V
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 393 SWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYI 452
+W+ MISGY ++ + + L LF M GIRP+ + L S + C+ L AL G+ IH +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 453 RKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSL 512
K+ L + T+LI MY K G + +A ++F ++K V +WNA+I G+A +G ADK+L
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 513 EMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDL 572
+F EM + + P+ ITFV VL AC H GLV+ G +F SM++++++EP HY CMVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 573 LGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFH 632
LGRAG L+EA +LI SMP P A +G LLGAC+ H + E+ E KL++L + +
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 633 VLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEID 692
V L+NI+ASK RW+DV VR M VVK+PG S IE +H F + DR HP+++ I
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 693 NMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIM 752
L E+ KK+KL GY P+ ++++E+KE L HSEKLA+AFG I + + I++
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 753 KNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
KNLRIC DCH A KFIS REI+VRD RFHHFK GSCSC D+W
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 37/378 (9%)
Query: 140 ASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVS 199
A +R +G L H ++A + + N+ LI + + A +LFDE P D S
Sbjct: 69 ARCVRSGDIDGALRVFHGMRA--KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFS 126
Query: 200 WNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDL 259
+N +L+ YV N E+A+ +++MP ++ + N+MI + R+G + +A LF M +K+
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNE 186
Query: 260 VSWSALISCYEQNEMYEEA-----------LVLFMNMIDHRVMVDEVVVVSV----LSAC 304
VSW+A+IS Y + E+A +V + MI + +V + ++
Sbjct: 187 VSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 305 ANLTVVKAGTS--VHALAVKIGIECYINLQNALIHMYSS--------CGEITTAEKLFDA 354
NL A S V + G++ + + I SS C E+ +A +L
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL-SALQLGRQ 305
Query: 355 GHNL--------DLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQ 406
H + D+ + S+IS Y KCG + A LF+ M +KDVV+W+ MISGYAQH
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 407 FSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQG-KWIHAYIRKNGLKINSILGT 465
+ L LF EM + IRPD T V+V+ AC H ++ G + + +R ++ T
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 466 TLIDMYMKLGCVDNALEV 483
++D+ + G ++ AL++
Sbjct: 426 CMVDLLGRAGKLEEALKL 443
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 48/205 (23%)
Query: 95 NGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDN--YTYPLL--AQASALRLSVFEG 150
N +N M+ Y++ + P+ + L++ ML + ++ + LL ++ SAL+L G
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL----G 303
Query: 151 KLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
+ IH V K+ +DV +LI+MY CG+L A KLF+ D+V+WN++++GY
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 211 DNVEEAKFIYNKMPERNI-----------IASN--------------------------- 232
N ++A ++ +M + I +A N
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 233 --SMIVLFGRKGNVAEACRLFKEMP 255
M+ L GR G + EA +L + MP
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 35 THLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESP 94
+ L Q +Q QI+S+ + L D A + LI E+ ++K+F ++
Sbjct: 295 SELSALQLGRQIHQIVSK---STLCNDVTALTSLISMYCKCG---ELGDAWKLFEVMKKK 348
Query: 95 NGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTY--PLLAQASA----LRLSVF 148
+ +N M+ Y Q +A+CL++ M++N + D T+ LLA A + ++ F
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 149 EGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYV 208
E ++ D+ K D Y ++++ G L A KL P + L G
Sbjct: 409 ES-MVRDY--KVEPQPDHYT--CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Query: 209 NA-DNVEEAKFIYNKMPERNIIASNSMIVL---FGRKGNVAEACRLFKEMPKKDLV 260
NVE A+F K+ + N + + L + K + R+ K M + ++V
Sbjct: 464 RVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 339/559 (60%), Gaps = 32/559 (5%)
Query: 241 KGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSV 300
+ +++ A LF+ M + D+V ++++ Y + E LF+ +++ ++ D S+
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 301 LSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDL 360
L ACA ++ G +H L++K+G++ + + LI+MY+ C +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED---------------- 179
Query: 361 ISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHH 420
V+ AR +FD ++E VV ++ MI+GYA+ ++ +E LSLF EMQ
Sbjct: 180 ---------------VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 421 GIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNA 480
++P+E TL+SV+S+C L +LD GKWIH Y +K+ + T LIDM+ K G +D+A
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 481 LEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHM 540
+ +F K +W+A+I+ +A +G A+KS+ MF M+ V P+EITF+G+L AC H
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 541 GLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGA 600
G V+EG ++F+ M+ + + P+ KHYG MVDLL RAG L++A E I+ +P+SP W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 601 LLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGV 660
LL AC H + ++ E+V ++ EL H G +V+LSN++A +W+ V +R +M R
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 661 VKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDT-LEVAFDID 719
VK+PGCS IE N ++HEF +GD ++ LDEM K+LKL GY PDT + V +++
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 720 QEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVR 779
+EKE TL HSEKLAI FGL+ P IR++KNLR+C DCH AAK IS F R++V+R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 780 DRHRFHHFKHGSCSCMDFW 798
D RFHHF+ G CSC DFW
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 173/357 (48%), Gaps = 41/357 (11%)
Query: 37 LQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNG 96
+ KC S ++ QI + I + I D ++LI F T+ MSY+ +F + P+
Sbjct: 36 ISKCNSLRELMQIQAYAIKSH-IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 97 FIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDH 156
IFN+M R Y + P + L+ +L + + DNYT+P L +A A+ ++ EG+ +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 157 VLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEA 216
+K G D +VYV TLINMY C D+ +AR +FD +V +N+++ GY + EA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 217 KFIYNKMPER----------NIIAS-----------------------------NSMIVL 237
++ +M + ++++S ++I +
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 238 FGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVV 297
F + G++ +A +F++M KD +WSA+I Y + E+++++F M V DE+
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 298 VSVLSACANLTVVKAGTSVHALAV-KIGIECYINLQNALIHMYSSCGEITTAEKLFD 353
+ +L+AC++ V+ G + V K GI I +++ + S G + A + D
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/753 (34%), Positives = 407/753 (54%), Gaps = 74/753 (9%)
Query: 84 SFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLML-NNNVGVDNYTYPLLAQASA 142
++ +F + N F +N ++ Y ++ +A+CLY ML V D YT+P + +
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 143 LRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNS 202
+ GK +H HV++ G++ D+ V N LI MY CGD+ +AR LFD P D++SWN+
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267
Query: 203 ILAGYVNADNVEEAKFIYNKM------PE--------------------RNIIA------ 230
+++GY E ++ M P+ R+I A
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 231 -------SNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFM 283
NS+ ++ G+ EA +LF M +KD+VSW+ +IS YE N + ++A+ +
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 284 NMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCG 343
M V DE+ V +VLSACA L + G +H LA+K + Y+ + N LI+MYS
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS--- 444
Query: 344 EITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQ 403
KC ++KA +F + K+V+SW+++I+G
Sbjct: 445 ----------------------------KCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476
Query: 404 HDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSIL 463
+++ E L +F+ ++P+ TL + ++AC + AL GK IHA++ + G+ ++ L
Sbjct: 477 NNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535
Query: 464 GTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGV 523
L+DMY++ G ++ A F+ +++K V+SWN L+ G++ G +E+F M KS V
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 524 TPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAE 583
P+EITF+ +L C +V +G +F+ M +++ + PN KHY C+VDLLGRAG L+EA
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 584 ELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKG 643
+ I+ MP++PD A WGALL AC+ H ++GE + + EL G+++LL N++A G
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 644 RWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLK 703
+W +V +VR MM G+ GCS +E G +H FL+ D+ HPQ EI+ +L+ +K+
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Query: 704 LEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHT 763
G + + D + ++ HSE+ AIAFGLI P PI + KNL +C +CH
Sbjct: 774 EVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHD 833
Query: 764 AAKFISRAFDREIVVRDRHRFHHFKHGSCSCMD 796
KFIS+ REI VRD FHHFK G CSC D
Sbjct: 834 TVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 254/595 (42%), Gaps = 97/595 (16%)
Query: 113 QQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTL 172
++A+ L M V VD + L + + + EG ++ L + V + N
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 173 INMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM--------- 223
+ M+ G+L A +F + +L SWN ++ GY +EA +Y++M
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 224 -------------------------------PERNIIASNSMIVLFGRKGNVAEACRLFK 252
E +I N++I ++ + G+V A LF
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 253 EMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKA 312
MP++D++SW+A+IS Y +N M E L LF M V D + + SV+SAC L +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 313 GTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLK 372
G +HA + G I++ N+L MY + G AEKLF D++SW +MISGY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 373 CGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSV 432
+KA I Y DQ S ++PDE T+ +V
Sbjct: 376 NFLPDKA------------------IDTYRMMDQDS-------------VKPDEITVAAV 404
Query: 433 ISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGV 492
+SAC L LD G +H K L I+ LI+MY K C+D AL++FH K V
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464
Query: 493 SSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLV---DEGHRH 549
SW ++I G +N ++L +MK + + PN IT L AC +G + E H H
Sbjct: 465 ISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 550 -FNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKH 608
+ + PN+ ++D+ R G + A S DV +W LL +
Sbjct: 524 VLRTGVGLDDFLPNA-----LLDMYVRCGRMNTAWSQFNS--QKKDVTSWNILLTGYSER 576
Query: 609 GDHEMGERVGRKLVE--LQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVV 661
G M + ++V+ ++PD F LL S+ MVR+G++
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ------------MVRQGLM 619
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 49 ILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQ 108
I + +I TG D + L + + + E K+F+ +E + + TM+ Y
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE---KLFSRMERKDIVSWTTMISGYEY 375
Query: 109 RNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYV 168
+P +AI Y++M ++V D T + A A + G +H +KA S V V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 169 NNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMP---- 224
N LINMY+ C + A +F P +++SW SI+AG + EA +M
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ 495
Query: 225 ---------------------ERNIIA-------------SNSMIVLFGRKGNVAEACRL 250
+ I A N+++ ++ R G + A
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 251 FKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVV 310
F KKD+ SW+ L++ Y + + LF M+ RV DE+ +S+L C+ +V
Sbjct: 556 FNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 311 KAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKL 351
+ G + G+ + ++ + GE+ A K
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 344/572 (60%), Gaps = 31/572 (5%)
Query: 227 NIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMI 286
++ A S++ ++ G + +A +LF E+P + +V+W+AL S Y + + EA+ LF M+
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 287 DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEIT 346
+ V D +V VLSAC ++ + +G + ++ ++ +N+ +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ-----KNSFVR--------- 250
Query: 347 TAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQ 406
++++ Y KCG +EKAR++FD+M+EKD+V+WSTMI GYA +
Sbjct: 251 -----------------TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 407 FSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTT 466
E + LF++M ++PD+ ++V +S+C L ALD G+W + I ++ N +
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 467 LIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPN 526
LIDMY K G + EVF +EK + NA I G A NG S +F + +K G++P+
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 527 EITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELI 586
TF+G+L C H GL+ +G R FN++ + L+ +HYGCMVDL GRAGML +A LI
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 587 ESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWD 646
MPM P+ WGALL C+ D ++ E V ++L+ L+P + G +V LSNI++ GRWD
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 647 DVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEG 706
+ EVR MM ++G+ KIPG S IE G +HEFLA D++HP ++I L+++ +++L G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 707 YAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAK 766
+ P T V FD+++EEKE L HSEKLA+A GLI+ IR++KNLR+C DCH K
Sbjct: 594 FVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMK 653
Query: 767 FISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
IS+ REIVVRD +RFH F +GSCSC D+W
Sbjct: 654 LISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/617 (22%), Positives = 266/617 (43%), Gaps = 119/617 (19%)
Query: 13 TIKSSVNAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFS 72
T+ S+ + K I+++ HL+ QI +I L DTF + L+K +
Sbjct: 5 TVPSATSKVQQIKTLISVACTVNHLK---------QIHVSLINHHLHHDTFLVNLLLKRT 55
Query: 73 TDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNY 132
L F + YS+ +F+ + PN F++N+++ ++ ++ + + L+ + + + + +
Sbjct: 56 ---LFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGF 112
Query: 133 TYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDES 192
T+PL+ +A S G +H V+K GF+ DV +L+++Y+ G L+ A KLFDE
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 193 PVLDLVSWNSILAGYVNADNVEEAKFIYNKMPE--------------------------- 225
P +V+W ++ +GY + EA ++ KM E
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 226 ------------RNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNE 273
+N +++ L+ + G + +A +F M +KD+V+WS +I Y N
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 274 MYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQN 333
+E + LF+ M+ + D+ +V LS+CA+L + G +L + + + N
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 334 ALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVS 393
ALI MY+ CG + ++F D++ N+ ISG K G V+ + A+F
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG--------- 403
Query: 394 WSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIR 453
+ + GI PD +T + ++ C +HA +
Sbjct: 404 ----------------------QTEKLGISPDGSTFLGLLCGC-----------VHAGLI 430
Query: 454 KNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLE 513
++GL+ + + CV AL ++ V + ++ + G+ D +
Sbjct: 431 QDGLRF-----------FNAISCV-YAL-------KRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 514 MFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEP-NSKHYGCMVDL 572
+ +M + PN I + +L CR LV + + + LEP N+ +Y + ++
Sbjct: 472 LICDMP---MRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQLSNI 525
Query: 573 LGRAGMLKEAEELIESM 589
G EA E+ + M
Sbjct: 526 YSVGGRWDEAAEVRDMM 542
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 333/572 (58%), Gaps = 32/572 (5%)
Query: 227 NIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMI 286
+I+ N+++ ++ + G++ EA ++F++MP++D V+W+ LIS Y Q++ +AL+ F M+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 287 DHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEIT 346
+E + SV+ A A G +H VK G + +++ +AL+ +Y+
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT------ 207
Query: 347 TAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQ 406
+ G ++ A+ +FDA+ ++ VSW+ +I+G+A+
Sbjct: 208 -------------------------RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 407 FSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTT 466
+ L LF M G RP + S+ AC+ L+QGKW+HAY+ K+G K+ + G T
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 467 LIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPN 526
L+DMY K G + +A ++F ++ V SWN+L+ +A +G +++ F EM++ G+ PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 527 EITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELI 586
EI+F+ VL AC H GL+DEG H+ ++++ + P + HY +VDLLGRAG L A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 587 ESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWD 646
E MP+ P A W ALL AC+ H + E+G + EL PD G HV+L NI+AS GRW+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 647 DVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEG 706
D VR M GV K P CS +E IH F+A D HPQ EI +E+ K+K G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 707 YAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAK 766
Y PDT V +DQ+E+E L HSEK+A+AF L+ P + I I KN+R+C DCHTA K
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 767 FISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
S+ REI+VRD +RFHHFK G+CSC D+W
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 190/404 (47%), Gaps = 72/404 (17%)
Query: 136 LLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVL 195
LL + + +L + +G+++H H+L++ F D+ + NTL+NMYA CG L ARK+F++ P
Sbjct: 66 LLKKCTVFKL-LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 196 DLVSWNSILAGYVNADNVEEAKFIYNKM--------------------PER--------- 226
D V+W ++++GY D +A +N+M ER
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 227 ----------NIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYE 276
N+ ++++ L+ R G + +A +F + ++ VSW+ALI+ + + E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 277 EALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALI 336
+AL LF M+ S+ AC++ ++ G VHA +K G + N L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 337 HMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWST 396
MY+ G I A K+FD D++SWNS
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNS------------------------------- 333
Query: 397 MISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNG 456
+++ YAQH E + F EM+ GIRP+E + +SV++AC+H LD+G + ++K+G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 457 LKINSILGTTLIDMYMKLGCVDNALEVFHGTE-EKGVSSWNALI 499
+ + T++D+ + G ++ AL E + W AL+
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 149/321 (46%), Gaps = 35/321 (10%)
Query: 290 VMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAE 349
+ D ++L C ++ G VHA ++ I + N L++MY+ CG + A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 350 KLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSE 409
K+F+ D ++W ++I SGY+QHD+ +
Sbjct: 116 KVFEKMPQRDFVTWTTLI-------------------------------SGYSQHDRPCD 144
Query: 410 TLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLID 469
L F +M G P+E TL SVI A G +H + K G N +G+ L+D
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 470 MYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEIT 529
+Y + G +D+A VF E + SWNALI G A +K+LE+F M + G P+ +
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 530 FVGVLGACRHMGLVDEGHRHFNSMIQE-HRLEPNSKHYGCMVDLLGRAGMLKEAEELIES 588
+ + GAC G +++G MI+ +L + + ++D+ ++G + +A ++ +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSIHDARKIFDR 322
Query: 589 MPMSPDVATWGALLGACKKHG 609
+ DV +W +LL A +HG
Sbjct: 323 LAKR-DVVSWNSLLTAYAQHG 342
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 35 THLQKCQSFKQFTQ--ILSQMILTGLIA-DTFAASRLIKFSTDLLPFIEMSYSFKIFAFL 91
T L+KC FK Q I+ IL + D + L+ E K+F +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR---KVFEKM 121
Query: 92 ESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGK 151
+ + T++ Y Q + P A+ + ML + +T + +A+A G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 152 LIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNAD 211
+H +K GFDS+V+V + L+++Y G + A+ +FD + VSWN+++AG+
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 212 NVEEAKFIYNKMPERNI---------------------------------------IASN 232
E+A ++ M A N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 233 SMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMV 292
+++ ++ + G++ +A ++F + K+D+VSW++L++ Y Q+ +EA+ F M +
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 293 DEVVVVSVLSACANLTVVKAGTSVHALAVKIGI 325
+E+ +SVL+AC++ ++ G + L K GI
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGI 394
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLS 146
+F LES N +N ++ + +R+ ++A+ L++ ML + +++Y L A +
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 147 VFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAG 206
+ +GK +H +++K+G + NTL++MYA G + ARK+FD D+VSWNS+L
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 207 YVNADNVEEAKFIYNKMPERNIIASN---------------------------------- 232
Y +EA + + +M I +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 233 -----SMIVLFGRKGNVAEACRLFKEMPKKDLVS-WSALIS 267
+++ L GR G++ A R +EMP + + W AL++
Sbjct: 398 AWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 18/267 (6%)
Query: 422 IRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNAL 481
I D +++ CT L QG+ +HA+I ++ + + ++G TL++MY K G ++ A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 482 EVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMG 541
+VF ++ +W LI G++ + +L F++M + G +PNE T V+ A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 542 LVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGAL 601
GH+ + + + N ++DL R G++ +A+ + +++ DV +W AL
Sbjct: 176 RGCCGHQ-LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV-SWNAL 233
Query: 602 L-GACKKHGDHEMGERVGRKLVE-LQPDHDGFHVLLSNIHAS----KGRWDDVLEVRGMM 655
+ G ++ G + E L + +P H + L ++ +G+W V M
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW-----VHAYM 288
Query: 656 VRRG--VVKIPGCSMIE---ANGIIHE 677
++ G +V G ++++ +G IH+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRL 145
KIF L + +N+++ AY Q ++A+ ++ M + + ++ + A +
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 146 SVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVS-WNSIL 204
+ EG ++ + K G + + T++++ GDL+ A + +E P+ + W ++L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 205 AGYVNADNVEEAKFIYNKMPERNIIASNSMIVLF------GRKGNVAEACRLFKE--MPK 256
N E + + E + ++L+ GR + A + KE + K
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 257 KDLVSW 262
+ SW
Sbjct: 498 EPACSW 503
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 334/559 (59%), Gaps = 33/559 (5%)
Query: 242 GNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVL 301
G++ A ++F EM K + W+ L Y +N++ E+L+L+ M D V DE V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 302 SACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLI 361
A + L G ++HA VK G C + L+ MY GE+++AE LF++ DL+
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 362 SWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHG 421
+WN+ ++ ++ G+ A F+ M V Q D F
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAV-----------QFDSF-------------- 211
Query: 422 IRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNAL 481
T+VS++SAC L +L+ G+ I+ RK + N I+ +DM++K G + A
Sbjct: 212 ------TVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 482 EVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMG 541
+F +++ V SW+ +I+G+AMNG + ++L +F+ M+ G+ PN +TF+GVL AC H G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 542 LVDEGHRHFNSMIQ--EHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWG 599
LV+EG R+F+ M+Q + LEP +HY CMVDLLGR+G+L+EA E I+ MP+ PD WG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 600 ALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRG 659
ALLGAC H D +G++V LVE PD +HVLLSNI+A+ G+WD V +VR M + G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 660 VVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDID 719
K+ S +E G IH F GD++HPQ I LDE+ KK++ GY PDT V D++
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 720 QEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVR 779
EEKE +L HSEKLAIAFGLI P +PIR+MKNLR C+DCH +KF+S EI++R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 780 DRHRFHHFKHGSCSCMDFW 798
D++RFHHF++G CSC +FW
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 165/392 (42%), Gaps = 74/392 (18%)
Query: 151 KLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
K IH VL+ GF + L+ V GD+ AR++FDE + WN++ GYV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 211 DNVEEAKFIYNKMPERNI---------------------------------------IAS 231
E+ +Y KM + + I +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 232 NSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVM 291
+++++ + G ++ A LF+ M KDLV+W+A ++ Q AL F M V
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 292 VDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKL 351
D VVS+LSAC L ++ G ++ A K I+C I ++NA + M+ CG A L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 352 FDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETL 411
F+ +++SW++MI G YA + E L
Sbjct: 268 FEEMKQRNVVSWSTMIVG-------------------------------YAMNGDSREAL 296
Query: 412 SLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK-WIHAYIRKN--GLKINSILGTTLI 468
+LF MQ+ G+RP+ T + V+SAC+H +++GK + ++ N L+ ++
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 469 DMYMKLGCVDNALEVFHGTE-EKGVSSWNALI 499
D+ + G ++ A E E W AL+
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 42/318 (13%)
Query: 44 KQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMM 103
KQ +I + ++ TG S L + +L+ +M Y+ ++F + P F++NT+
Sbjct: 25 KQLKKIHAIVLRTGFSEKN---SLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 104 RAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFD 163
+ Y++ +P +++ LYK M + V D +TYP + +A + G +H HV+K GF
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 164 SDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM 223
V L+ MY G+LS+A LF+ V DLV+WN+ LA V N A +NKM
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 224 P---------------------------------------ERNIIASNSMIVLFGRKGNV 244
+ NII N+ + + + GN
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 245 AEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSAC 304
A LF+EM ++++VSWS +I Y N EAL LF M + + + V + VLSAC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 305 ANLTVVKAGTSVHALAVK 322
++ +V G +L V+
Sbjct: 322 SHAGLVNEGKRYFSLMVQ 339
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 444 QGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFA 503
Q K IHA + + G + L T L++ + +G + A +VF + + WN L G+
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 504 MNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNS 563
N L +SL ++ +M+ GV P+E T+ V+ A +G G + H ++
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF-----ALHAHVVKYG- 139
Query: 564 KHYGC-------MVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGER 616
+GC +V + + G L AE L ESM + D+ W A L C + G+ +
Sbjct: 140 --FGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALE 196
Query: 617 VGRKLVELQPDHDGFHVL 634
K+ D F V+
Sbjct: 197 YFNKMCADAVQFDSFTVV 214
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 76 LPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYP 135
+ F E+S + +F ++ + +N + +Q A+ + M + V D++T
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 136 LLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVL 195
+ A S+ G+ I+D K D ++ V N ++M+ CG+ AAR LF+E
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 196 DLVSWNSILAGYVNADNVEEAKFIYNKMPER----NIIASNSMIVLFGRKGNVAEACRLF 251
++VSW++++ GY + EA ++ M N + ++ G V E R F
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 252 KEM---------PKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLS 302
M P+K+ ++ ++ ++ + EEA M V D + ++L
Sbjct: 335 SLMVQSNDKNLEPRKE--HYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLG 389
Query: 303 ACA 305
ACA
Sbjct: 390 ACA 392
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 360/639 (56%), Gaps = 77/639 (12%)
Query: 144 RLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVL-------- 195
+LS + +H V+K+GF +++++ N LI+ Y+ CG L R++FD+ P
Sbjct: 33 KLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSV 92
Query: 196 -----------------------DLVSWNSILAGYVNADNVEEA----------KFIYNK 222
D +WNS+++G+ D EEA F+ N+
Sbjct: 93 VTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNE 152
Query: 223 MPERNIIAS-----------------------------NSMIVLFGRKGNVAEACRLFKE 253
+++++ ++++ ++ + GNV +A R+F E
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 254 MPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAG 313
M +++VSW++LI+C+EQN EAL +F M++ RV DEV + SV+SACA+L+ +K G
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 314 TSVHALAVK-IGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLK 372
VH VK + I L NA + MY+ C I A +FD+ ++I+ SMISGY
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 373 CGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSV 432
S + AR +F M E++VVSW+ +I+GY Q+ + E LSLF ++ + P + ++
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 433 ISACTHLVALDQGKWIHAYIRKNGLKINS------ILGTTLIDMYMKLGCVDNALEVFHG 486
+ AC L L G H ++ K+G K S +G +LIDMY+K GCV+ VF
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 487 TEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEG 546
E+ SWNA+IIGFA NG +++LE+F EM +SG P+ IT +GVL AC H G V+EG
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 547 HRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACK 606
+F+SM ++ + P HY CMVDLLGRAG L+EA+ +IE MPM PD WG+LL ACK
Sbjct: 513 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 607 KHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGC 666
H + +G+ V KL+E++P + G +VLLSN++A G+W+DV+ VR M + GV K PGC
Sbjct: 573 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 632
Query: 667 SMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLE 705
S I+ G H F+ D++HP+ +I ++LD + +++ E
Sbjct: 633 SWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 243/557 (43%), Gaps = 120/557 (21%)
Query: 10 LSSTIKSSVNAKPIFKPTINLSILETHLQ--------------KCQSFKQFTQILSQMIL 55
L S IKS ++A I+ ++ S++++ KC S + Q+ +M
Sbjct: 26 LDSCIKSKLSA--IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ 83
Query: 56 TGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQA 115
+ + L K L F++ + S +F + + +N+M+ + Q + ++A
Sbjct: 84 RNIYTWNSVVTGLTK-----LGFLDEADS--LFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 116 ICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINM 175
+C + +M ++ Y++ + A + + +G +H + K+ F SDVY+ + L++M
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 176 YAVCGDLSAARKLFDESPVLDLVSWNSILAGY--------------------VNADNVEE 215
Y+ CG+++ A+++FDE ++VSWNS++ + V D V
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 216 A--------------------KFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMP 255
A + + N +II SN+ + ++ + + EA +F MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 256 -------------------------------KKDLVSWSALISCYEQNEMYEEALVLFMN 284
++++VSW+ALI+ Y QN EEAL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 285 MIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGE 344
+ V ++L ACA+L + G H +K G +
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK------------------ 418
Query: 345 ITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQH 404
F +G D+ NS+I Y+KCG VE+ +F M+E+D VSW+ MI G+AQ+
Sbjct: 419 -------FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 405 DQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK-WIHAYIRKNGLKINSIL 463
+E L LF EM G +PD T++ V+SAC H +++G+ + + R G+
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 464 GTTLIDMYMKLGCVDNA 480
T ++D+ + G ++ A
Sbjct: 532 YTCMVDLLGRAGFLEEA 548
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 62/280 (22%)
Query: 39 KCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFK----IFAFLESP 94
KC K+ I M + +IA+T ++ M+ S K +F +
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAET-----------SMISGYAMAASTKAARLMFTKMAER 349
Query: 95 NGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIH 154
N +N ++ Y Q ++A+ L+ L+ +V +Y++ + +A A + G H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 155 DHVLKAGF------DSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYV 208
HVLK GF + D++V N+LI+MY CG + +F + D VSWN+++ G+
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 209 -----------------------------------NADNVEEAKFIYNKMPERNIIAS-- 231
+A VEE + ++ M +A
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 232 ---NSMIVLFGRKGNVAEACRLFKEMP-KKDLVSWSALIS 267
M+ L GR G + EA + +EMP + D V W +L++
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 569
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/674 (35%), Positives = 372/674 (55%), Gaps = 63/674 (9%)
Query: 126 NVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAA 185
N+ + + Q+ R S+ GK +H ++ +GF SD ++ N L++MY+ GD +A
Sbjct: 39 NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSA 98
Query: 186 RKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVA 245
+Y +M ++N ++SN +I + R G++
Sbjct: 99 VA-------------------------------VYGRMRKKNYMSSNILINGYVRAGDLV 127
Query: 246 EACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACA 305
A ++F EMP + L +W+A+I+ Q E EE L LF M DE + SV S A
Sbjct: 128 NARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSA 187
Query: 306 NLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNS 365
L V G +H +K G+E + + ++L HMY
Sbjct: 188 GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY-------------------------- 221
Query: 366 MISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPD 425
++ G ++ + +M +++V+W+T+I G AQ+ L L+ M+ G RP+
Sbjct: 222 -----MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 276
Query: 426 EATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFH 485
+ T V+V+S+C+ L QG+ IHA K G + ++LI MY K GC+ +A + F
Sbjct: 277 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 336
Query: 486 GTEEKGVSSWNALIIGFAMNGLADKSLEMFSEM-KKSGVTPNEITFVGVLGACRHMGLVD 544
E++ W+++I + +G D+++E+F+ M +++ + NE+ F+ +L AC H GL D
Sbjct: 337 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 396
Query: 545 EGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGA 604
+G F+ M++++ +P KHY C+VDLLGRAG L +AE +I SMP+ D+ W LL A
Sbjct: 397 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Query: 605 CKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIP 664
C H + EM +RV ++++++ P+ +VLL+N+HAS RW DV EVR M + V K
Sbjct: 457 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 516
Query: 665 GCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKE 724
G S E G +H+F GDR+ + EI + L E+ ++KL+GY PDT V D+D+EEKE
Sbjct: 517 GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKE 576
Query: 725 TTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRF 784
+ L +HSEKLA+AF L+ + PIRI+KNLR+C+DCH A K+IS +REI +RD RF
Sbjct: 577 SDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRF 636
Query: 785 HHFKHGSCSCMDFW 798
HHF +G CSC D+W
Sbjct: 637 HHFINGKCSCGDYW 650
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 178/435 (40%), Gaps = 73/435 (16%)
Query: 29 NLSILETHLQKC---QSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFI------ 79
N S+ +Q C QS Q+ ++++G +D F + L+ + L F
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 80 ----------------------EMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAIC 117
++ + K+F + +N M+ IQ ++ +
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 118 LYKLMLNNNVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYA 177
L++ M D YT + SA SV G+ IH + +K G + D+ VN++L +MY
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 178 VCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIY----------NKMPERN 227
G L + PV +LV+WN+++ G E ++Y NK+
Sbjct: 223 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 282
Query: 228 IIASNS-----------------------------MIVLFGRKGNVAEACRLFKEMPKKD 258
+++S S +I ++ + G + +A + F E +D
Sbjct: 283 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 342
Query: 259 LVSWSALISCYEQNEMYEEALVLFMNMIDHRVM-VDEVVVVSVLSACANLTVVKAGTSVH 317
V WS++IS Y + +EA+ LF M + M ++EV +++L AC++ + G +
Sbjct: 343 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 402
Query: 318 ALAV-KIGIECYINLQNALIHMYSSCGEITTAEKLFDAGH-NLDLISWNSMISGYLKCGS 375
+ V K G + + ++ + G + AE + + D++ W +++S +
Sbjct: 403 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 462
Query: 376 VEKARALFDAMIEKD 390
E A+ +F +++ D
Sbjct: 463 AEMAQRVFKEILQID 477
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/802 (33%), Positives = 423/802 (52%), Gaps = 86/802 (10%)
Query: 48 QILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYI 107
QI+ + +GL+ D F S L+ + +SY+ K+F +E+ N N +M +
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLV---SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 108 QRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQAS-----ALRLSVFEGKLIHDHVLKAGF 162
++ ++A L+ + +N+ + V +Y +L + A + + +G+ +H HV+ G
Sbjct: 286 RQKWGEEATKLF-MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 163 -DSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYN 221
D V + N L+NMYA CG ++ AR++F D VSWNS++ G EA Y
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 222 KMPERNII---------------------------------------ASNSMIVLFGRKG 242
M +I+ SN+++ L+ G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 243 NVAEACRLFKEMPKKDLVSWSALISCYEQNEM-YEEALVLFMNMIDHRVMVDEVVVVSVL 301
+ E ++F MP+ D VSW+++I ++E EA+V F+N ++ + SVL
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 302 SACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLI 361
SA ++L+ + G +H LA+K I +NALI Y
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG--------------------- 563
Query: 362 SWNSMISGYLKCGSVEKARALFDAMIEK-DVVSWSTMISGYAQHDQFSETLSLFMEMQHH 420
KCG ++ +F M E+ D V+W++MISGY ++ ++ L L M
Sbjct: 564 ----------KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 421 GIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNA 480
G R D +V+SA + L++G +HA + L+ + ++G+ L+DMY K G +D A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 481 LEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTP-NEITFVGVLGACRH 539
L F+ + SWN++I G+A +G +++L++F MK G TP + +TFVGVL AC H
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 540 MGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWG 599
GL++EG +HF SM + L P +H+ CM D+LGRAG L + E+ IE MPM P+V W
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 600 ALLGACKKHGDH--EMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVR 657
+LGAC + E+G++ L +L+P++ +VLL N++A+ GRW+D+++ R M
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 658 RGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFD 717
V K G S + +H F+AGD++HP + I L E+ +K++ GY P T +D
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYD 913
Query: 718 IDQEEKETTLFRHSEKLAIAFGLITI-SPPNPIRIMKNLRICNDCHTAAKFISRAFDREI 776
++QE KE L HSEKLA+AF L S PIRIMKNLR+C DCH+A K+IS+ R+I
Sbjct: 914 LEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQI 973
Query: 777 VVRDRHRFHHFKHGSCSCMDFW 798
++RD +RFHHF+ G+CSC DFW
Sbjct: 974 ILRDSNRFHHFQDGACSCSDFW 995
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 212/502 (42%), Gaps = 80/502 (15%)
Query: 151 KLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
+ H + K D DVY+ N LIN Y GD +ARK+FDE P+ + VSW I++GY
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 211 DNVEEAKFIYNKMPERNIIASN--------------SMIVLFGRK--------------- 241
+EA M + I ++ S+ +LFGR+
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 242 -------------GNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDH 288
G+V A F ++ K+ VSW+++IS Y Q A +F +M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 289 RVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTA 348
E S+++ +LT E + L ++ G +T
Sbjct: 201 GSRPTEYTFGSLVTTACSLT-----------------EPDVRLLEQIMCTIQKSGLLT-- 241
Query: 349 EKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFS 408
DL + ++S + K GS+ AR +F+ M ++ V+ + ++ G +
Sbjct: 242 ----------DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 409 ETLSLFMEMQHHGIRPDEATLVSVIS----ACTHLVALDQGKWIHAYIRKNGLKINSI-L 463
E LFM+M E+ ++ + S + V L +G+ +H ++ GL + +
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 464 GTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGV 523
G L++MY K G + +A VF+ +K SWN++I G NG +++E + M++ +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 524 TPNEITFVGVLGACRHMGLVDEGHR-HFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEA 582
P T + L +C + G + H S+ + ++ N ++ L G L E
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 583 EELIESMPMSPDVATWGALLGA 604
++ SMP D +W +++GA
Sbjct: 470 RKIFSSMP-EHDQVSWNSIIGA 490
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/568 (21%), Positives = 240/568 (42%), Gaps = 84/568 (14%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASAL-- 143
K+F + N + ++ Y + ++A+ + M+ + + Y + + +A
Sbjct: 57 KVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Query: 144 RLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVC-GDLSAARKLFDESPVLDLVSWNS 202
+ + G+ IH + K + D V+N LI+MY C G + A F + V + VSWNS
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNS 176
Query: 203 ILAGYVNADNVEEAKFIYNKM------------------------PE------------- 225
I++ Y A + A I++ M P+
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 226 ----RNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVL 281
++ + ++ F + G+++ A ++F +M ++ V+ + L+ + + EEA L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 282 FMNMIDHRVMVDEVVVVSVLSACANLTV-----VKAGTSVHALAVKIG-IECYINLQNAL 335
FM+M + + V V +LS+ ++ +K G VH + G ++ + + N L
Sbjct: 297 FMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 336 IHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWS 395
++MY+ CG I A ++F + D +SWNSM
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSM----------------------------- 386
Query: 396 TMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKN 455
I+G Q+ F E + + M+ H I P TL+S +S+C L G+ IH K
Sbjct: 387 --ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 456 GLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLA-DKSLEM 514
G+ +N + L+ +Y + G ++ ++F E SWN++I A + + +++
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 515 FSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLG 574
F +++G N ITF VL A + + G + + + ++ + + ++ G
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYG 563
Query: 575 RAGMLKEAEELIESMPMSPDVATWGALL 602
+ G + E++ M D TW +++
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 175/402 (43%), Gaps = 45/402 (11%)
Query: 219 IYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEA 278
+Y ++++ N++I + G+ A ++F EMP ++ VSW+ ++S Y +N ++EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 279 LVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKA--GTSVHALAVKIGIECYINLQNALI 336
LV +M+ + ++ VSVL AC + V G +H L K+ + N LI
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 337 HMYSSC-GEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWS 395
MY C G + A F + +SWNS+IS Y + G
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG--------------------- 185
Query: 396 TMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQG--KWIHAYIR 453
DQ S +F MQ+ G RP E T S+++ L D + I I+
Sbjct: 186 ---------DQRS-AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 454 KNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLE 513
K+GL + +G+ L+ + K G + A +VF+ E + + N L++G +++ +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 514 MFSEMKKS-GVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY-----G 567
+F +M V+P ++V +L + L +E + H + +
Sbjct: 296 LFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 568 CMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHG 609
+V++ + G + +A + M D +W +++ ++G
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG 394
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 154/334 (46%), Gaps = 36/334 (10%)
Query: 350 KLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSE 409
+L+ + D+ N++I+ YL+ G AR +FD M ++ VSW+ ++SGY+++ + E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 410 TLSLFMEMQHHGIRPDEATLVSVISACTHL--VALDQGKWIHAYIRKNGLKINSILGTTL 467
L +M GI ++ VSV+ AC + V + G+ IH + K +++++ L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 468 IDMYMK-LGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPN 526
I MY K +G V AL F E K SWN++I ++ G + +FS M+ G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 527 EITFVG-VLGACRHMGLVDEGHRHFNSM---IQEHRLEPNSKHYGCMVDLLGRAGMLKEA 582
E TF V AC L + R + IQ+ L + +V ++G L A
Sbjct: 206 EYTFGSLVTTAC---SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 583 EELIESMPMSPDVATWGALLGACKKHGDHEMGERVGR------KLVELQPDHDGFHVLLS 636
++ M V G ++G ++ + GE + ++++ P + + +LLS
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQ----KWGEEATKLFMDMNSMIDVSP--ESYVILLS 316
Query: 637 N---------IHASKGRWDDVLEVRGMMVRRGVV 661
+ + KGR EV G ++ G+V
Sbjct: 317 SFPEYSLAEEVGLKKGR-----EVHGHVITTGLV 345
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/712 (34%), Positives = 372/712 (52%), Gaps = 64/712 (8%)
Query: 88 FAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNN-NVGVDNYTYPLLAQASALRLS 146
F L +G +N ++ Y + A+ Y M+ + + + T + + S+
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 147 VFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAG 206
V GK IH V+K GF+S + V + L+ MYA G +S A+K
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK------------------- 195
Query: 207 YVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALI 266
++ + +RN + NS++ G + +A +LF+ M +KD VSW+A+I
Sbjct: 196 ------------VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMI 242
Query: 267 SCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIE 326
QN + +EA+ F M + +D+ SVL AC L + G +HA ++ +
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 327 CYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAM 386
+I + +ALI MY C KC + A+ +FD M
Sbjct: 303 DHIYVGSALIDMYCKC-----------------------------KC--LHYAKTVFDRM 331
Query: 387 IEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGK 446
+K+VVSW+ M+ GY Q + E + +F++MQ GI PD TL ISAC ++ +L++G
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 447 WIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNG 506
H +GL + +L+ +Y K G +D++ +F+ + SW A++ +A G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 507 LADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY 566
A +++++F +M + G+ P+ +T GV+ AC GLV++G R+F M E+ + P+ HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 567 GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQP 626
CM+DL R+G L+EA I MP PD W LL AC+ G+ E+G+ L+EL P
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 627 DHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHP 686
H + LLS+I+ASKG+WD V ++R M + V K PG S I+ G +H F A D + P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 687 QINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPP 746
+++I L+E+ K+ GY PDT V D+++ K L HSE+LAIAFGLI +
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG 691
Query: 747 NPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
PIR+ KNLR+C DCH A K IS REI+VRD RFH FK G+CSC DFW
Sbjct: 692 QPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 248/483 (51%), Gaps = 43/483 (8%)
Query: 151 KLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVNA 210
K+IH ++++A + ++ N +++ YA+ + AR++FD P +L SWN++L Y A
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 211 DNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYE 270
+ E + + K+P+R+ + N +I + G V A + + M
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM---------------- 129
Query: 271 QNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYIN 330
M D + V ++++L ++ V G +H +K+G E Y+
Sbjct: 130 --------------MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLL 175
Query: 331 LQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKD 390
+ + L++MY++ G I+ A+K+F + + + +NS++ G L CG +E A LF M EKD
Sbjct: 176 VGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKD 234
Query: 391 VVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHA 450
VSW+ MI G AQ+ E + F EM+ G++ D+ SV+ AC L A+++GK IHA
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 451 YIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADK 510
I + + + +G+ LIDMY K C+ A VF ++K V SW A+++G+ G A++
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 511 SLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHY---- 566
++++F +M++SG+ P+ T + AC ++ ++EG + I + HY
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVS 409
Query: 567 GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVE--L 624
+V L G+ G + ++ L M + D +W A++ A + G ++ K+V+ L
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 625 QPD 627
+PD
Sbjct: 469 KPD 471
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 81 MSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQA 140
+ Y+ +F ++ N + M+ Y Q ++A+ ++ M + + D+YT A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 141 SALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSW 200
A S+ EG H + +G V V+N+L+ +Y CGD+ + +LF+E V D VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 201 NSILAGYVNADNVEEAKFIYNKMPERNI----IASNSMIVLFGRKGNVAEACRLFKEMPK 256
++++ Y E +++KM + + + +I R G V + R FK M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 257 K-----DLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACAN 306
+ + +S +I + ++ EEA+ M D + ++LSAC N
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRN 552
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/667 (34%), Positives = 361/667 (54%), Gaps = 63/667 (9%)
Query: 133 TYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDES 192
TY L Q + ++ EGK +H+H+ +GF
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGF------------------------------ 116
Query: 193 PVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFK 252
V +V WN +L Y ++ +A+ ++++MP R++ + N M+ + G + EA +LF
Sbjct: 117 -VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 253 EMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLT-VVK 311
EM +KD SW+A+++ Y + + EEALVL+ M + VS+ A A ++
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 312 AGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYL 371
G +H V+ G++ D + W+S++ Y
Sbjct: 236 RGKEIHGHIVRAGLDS-------------------------------DEVLWSSLMDMYG 264
Query: 372 KCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVS 431
KCG +++AR +FD ++EKDVVSW++MI Y + ++ E SLF E+ RP+E T
Sbjct: 265 KCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG 324
Query: 432 VISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKG 491
V++AC L + GK +H Y+ + G S ++L+DMY K G +++A V G +
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 492 VSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFN 551
+ SW +LI G A NG D++L+ F + KSG P+ +TFV VL AC H GLV++G F
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 552 SMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDH 611
S+ ++HRL S HY C+VDLL R+G ++ + +I MPM P W ++LG C +G+
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 612 EMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEA 671
++ E ++L +++P++ +V ++NI+A+ G+W++ ++R M GV K PG S E
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 672 NGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHS 731
H F+A D +HP N+I L E+ KK+K EGY P T V D++ E+KE L HS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 732 EKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGS 791
EKLA+AF +++ I++ KNLR C DCH A KFIS R+I VRD RFH F++G
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 792 CSCMDFW 798
CSC D+W
Sbjct: 685 CSCGDYW 691
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 49/387 (12%)
Query: 86 KIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLN-NNVGVDNYTYPLLAQASALR 144
K+F + + + + M+ Y++++ P++A+ LY LM N + +T + A+A
Sbjct: 172 KLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAV 231
Query: 145 LSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSIL 204
+ GK IH H+++AG DSD + ++L++MY CG + AR +FD+ D+VSW S++
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 205 AGYVNADNVEEAKFIYNKM------PERNI------------------------------ 228
Y + E +++++ P
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 229 ---IASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNM 285
AS+S++ ++ + GN+ A + PK DLVSW++LI QN +EAL F +
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 286 IDHRVMVDEVVVVSVLSACANLTVVKAGTS-VHALAVKIGIECYINLQNALIHMYSSCGE 344
+ D V V+VLSAC + +V+ G +++ K + + L+ + + G
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR 471
Query: 345 ITTAEKLF-DAGHNLDLISWNSMISGYLKCGSV----EKARALFDAMIEKDVVSWSTMIS 399
+ + + W S++ G G++ E A+ LF E + V++ TM +
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMAN 530
Query: 400 GYAQHDQFSETLSLFMEMQHHGI--RP 424
YA ++ E + MQ G+ RP
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 10 LSSTIKSSVNAKP-IFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRL 68
L S ++ N++P IF T+++++ KC ++ +I ++ GL +D S L
Sbjct: 204 LYSLMQRVPNSRPNIF--TVSIAVAAAAAVKC--IRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 69 IKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVG 128
+ E IF + + + +M+ Y + + ++ L+ ++ +
Sbjct: 260 MDMYGKCGCIDEAR---NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 129 VDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKL 188
+ YT+ + A A + GK +H ++ + GFD + +++L++MY CG++ +A+ +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 189 FDESPVLDLVSWNSILAGYVNADNVEEA 216
D P DLVSW S++ G +EA
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%)
Query: 423 RPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALE 482
+P +T ++I C+ AL++GK +H +IR +G ++ L+ MY K G + +A +
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 483 VFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEM 518
VF + + SWN ++ G+A GL +++ ++F EM
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/641 (34%), Positives = 363/641 (56%), Gaps = 40/641 (6%)
Query: 167 YVNNTLINMYAVCGDLSAARKLFDES---PVLDLVSWNSILAGYVNADNVEEAKFIYNKM 223
YV T++ + +C + L + + P + ++++L ++ + + + ++ M
Sbjct: 19 YVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHM 78
Query: 224 PERNIIASN----SMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEAL 279
+ + + +++ +G+ + +A ++ EMP+K++VSW+A+IS Y Q EAL
Sbjct: 79 IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEAL 138
Query: 280 VLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMY 339
+F M+ +E +VL++C + + G +H L VK + +I + ++L+ MY
Sbjct: 139 TVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMY 198
Query: 340 SSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMIS 399
+ K G +++AR +F+ + E+DVVS + +I+
Sbjct: 199 A-------------------------------KAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 400 GYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKI 459
GYAQ E L +F + G+ P+ T S+++A + L LD GK H ++ + L
Sbjct: 228 GYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 460 NSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMK 519
++L +LIDMY K G + A +F E+ SWNA+++G++ +GL + LE+F M+
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 520 -KSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQ-EHRLEPNSKHYGCMVDLLGRAG 577
+ V P+ +T + VL C H + D G F+ M+ E+ +P ++HYGC+VD+LGRAG
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAG 407
Query: 578 MLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSN 637
+ EA E I+ MP P G+LLGAC+ H ++GE VGR+L+E++P++ G +V+LSN
Sbjct: 408 RIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSN 467
Query: 638 IHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFLAGDRTHPQINEIDNMLDE 697
++AS GRW DV VR MM+++ V K PG S I+ +H F A DRTHP+ E+ + E
Sbjct: 468 LYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKE 527
Query: 698 MAKKLKLEGYAPDTLEVAFDIDQEEKETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRI 757
++ K+K GY PD V +D+D+E+KE L HSEKLA+ FGLI PIR+ KNLRI
Sbjct: 528 ISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRI 587
Query: 758 CNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
C DCH AK S+ F+RE+ +RD++RFH G CSC D+W
Sbjct: 588 CVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 222/531 (41%), Gaps = 110/531 (20%)
Query: 89 AFLESPNGFIFNTMMR-AYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSV 147
+F SP ++ T++ + + N Q L ML +G + Y L A + ++
Sbjct: 11 SFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGF--HGYDALLNACLDKRAL 68
Query: 148 FEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGY 207
+G+ +H H++K + Y+ L+ Y C L ARK+ DE P ++VSW ++++ Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 208 VNADNVEEAKFIYNKM------P---------------------------------ERNI 228
+ EA ++ +M P + +I
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 229 IASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDH 288
+S++ ++ + G + EA +F+ +P++D+VS +A+I+ Y Q + EEAL +F +
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 289 RVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTA 348
+ + V S+L+A + L ++ G H ++ + Y LQN+LI MYS CG ++ A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 349 EKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFS 408
+LFD ISWN+M+ G Y++H
Sbjct: 309 RRLFDNMPERTAISWNAMLVG-------------------------------YSKHGLGR 337
Query: 409 ETLSLFMEMQHHG-IRPDEATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTL 467
E L LF M+ ++PD TL++V+S C+H D G
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG---------------------- 375
Query: 468 IDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNE 527
L D + +GT + G + ++ M G A + E F +K+ P
Sbjct: 376 ------LNIFDGMVAGEYGT-KPGTEHYGCIV---DMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 528 ITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEP-NSKHYGCMVDLLGRAG 577
+LGACR VD G +I+ +EP N+ +Y + +L AG
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIE---IEPENAGNYVILSNLYASAG 473
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 164/377 (43%), Gaps = 60/377 (15%)
Query: 23 IFKPTINLSILETHLQKC---QSFKQFTQILSQMILTGLIADTFAASRLIKF--STDLLP 77
+ P + + L C ++ + ++ + MI T + T+ +RL+ F D L
Sbjct: 45 MLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCL- 103
Query: 78 FIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLL 137
+ K+ + N + M+ Y Q +A+ ++ M+ ++ + +T+ +
Sbjct: 104 ----EDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 138 AQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDL 197
+ + GK IH ++K +DS ++V ++L++MYA G + AR++F+ P D+
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 198 VSWNSILAGYVNADNVEEAKFIYNKMPERNI----------------------------- 228
VS +I+AGY EEA +++++ +
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 229 ----------IASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCYEQNEMYEEA 278
+ NS+I ++ + GN++ A RLF MP++ +SW+A++ Y ++ + E
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 279 LVLFMNMIDH-RVMVDEVVVVSVLSACANLTVVKAGTSVH------ALAVKIGIECYINL 331
L LF M D RV D V +++VLS C++ + G ++ K G E Y
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY--- 396
Query: 332 QNALIHMYSSCGEITTA 348
++ M G I A
Sbjct: 397 -GCIVDMLGRAGRIDEA 412
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 326/556 (58%), Gaps = 4/556 (0%)
Query: 247 ACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACAN 306
A R+ + + ++ W+A+I Y ++EA+ ++ M + ++L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 307 LTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSM 366
+ + G HA ++ C++ + N +I MY C I A K+FD D+ISW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 367 ISGYLKCGSVEKARALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDE 426
I+ Y + G++E A LF+++ KD+V+W+ M++G+AQ+ + E L F M+ GIR DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 427 ATLVSVISACTHLVALDQGKWIHAYIRKNGLKINS--ILGTTLIDMYMKLGCVDNALEVF 484
T+ ISAC L A +K+G + ++G+ LIDMY K G V+ A+ VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 485 HGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEM-KKSGVTPNEITFVGVLGACRHMGLV 543
K V +++++I+G A +G A ++L +F M ++ + PN +TFVG L AC H GLV
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 544 DEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLG 603
D+G + F+SM Q ++P HY CMVDLLGR G L+EA ELI++M + P WGALLG
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 604 ACKKHGDHEMGERVGRKLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKI 663
AC+ H + E+ E L EL+PD G ++LLSN++AS G W VL VR ++ +G+ K
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 664 PGCS-MIEANGIIHEFLAGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFDIDQEE 722
P S +++ NG +H+F G+ HP N+I + L+E+ ++L + GY PD V +D+
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 723 KETTLFRHSEKLAIAFGLITISPPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRH 782
K L +H+EKLA+AF L+T + + I IMKNLR+C DCH + S + I++RD
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 783 RFHHFKHGSCSCMDFW 798
RFHHF+ G CSC DFW
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 204/474 (43%), Gaps = 66/474 (13%)
Query: 30 LSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFSTDLLPFIEMSYSFKIFA 89
+S L + L C + Q QI ++ GL + ++LI+ T L ++ Y+ ++
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYARRVIE 107
Query: 90 FLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNNNVGVDNYTYPLLAQASALRLSVFE 149
++ N F++ ++R Y +AI +Y M + ++T+ L +A +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 150 GKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAARKLFDESPVLDLVSWNSILAGYVN 209
G+ H + VYV NT+I+MY C + ARK+FDE P D++SW ++A Y
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 210 ADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVAEACRLFKEMPKKDLVSWSALISCY 269
N+E A ++ +P ++++A +M+ F
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFA------------------------------ 257
Query: 270 EQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIEC-- 327
QN +EAL F M + DEV V +SACA L K +A K G
Sbjct: 258 -QNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 328 YINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMI 387
++ + +ALI MYS CG + A +F + +N ++ +++SMI G G ++A LF M+
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 388 EKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHLVALDQGKW 447
+ I+P+ T V + AC+H +DQG+
Sbjct: 377 TQT------------------------------EIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 448 IHAYIRKN-GLKINSILGTTLIDMYMKLGCVDNALEVFHG-TEEKGVSSWNALI 499
+ + + G++ T ++D+ + G + ALE+ + E W AL+
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 426 EATLVSVISACTHLVALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDN--ALEV 483
E + S+IS + L+Q K IH ++ + GL + + T LI KLG + A V
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 484 FHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLV 543
+ + W A+I G+A+ G D+++ M+ M+K +TP TF +L AC M +
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 544 DEGHRHFNSMIQEHRLEPNSKHY--GCMVDLLGRAGMLKEAEELIESMPMSPDVATWGAL 601
+ G R F++ Q RL Y M+D+ + + A ++ + MP DV +W L
Sbjct: 166 NLG-RQFHA--QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTEL 221
Query: 602 LGACKKHGDHEMGERVGRKLVELQPDHD 629
+ A + G+ E +L E P D
Sbjct: 222 IAAYARVGNME----CAAELFESLPTKD 245
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 339/578 (58%), Gaps = 40/578 (6%)
Query: 180 GDLSAARKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKM------PER------- 226
G +S A KLF + P D+V WN+++ G+ D E +Y M P+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 227 ---------------------------NIIASNSMIVLFGRKGNVAEACRLFKEMPKKDL 259
N+ N+++ ++ G + A +F K+D+
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 260 VSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHAL 319
SW+ +IS Y + + YEE++ L + M + V V ++ VLSAC+ + VH
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 320 AVKIGIECYINLQNALIHMYSSCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKA 379
+ E + L+NAL++ Y++CGE+ A ++F + D+ISW S++ GY++ G+++ A
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 380 RALFDAMIEKDVVSWSTMISGYAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTHL 439
R FD M +D +SW+ MI GY + F+E+L +F EMQ G+ PDE T+VSV++AC HL
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 440 VALDQGKWIHAYIRKNGLKINSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALI 499
+L+ G+WI YI KN +K + ++G LIDMY K GC + A +VFH +++ +W A++
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 500 IGFAMNGLADKSLEMFSEMKKSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRL 559
+G A NG +++++F +M+ + P++IT++GVL AC H G+VD+ + F M +HR+
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 560 EPNSKHYGCMVDLLGRAGMLKEAEELIESMPMSPDVATWGALLGACKKHGDHEMGERVGR 619
EP+ HYGCMVD+LGRAG++KEA E++ MPM+P+ WGALLGA + H D M E +
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAK 561
Query: 620 KLVELQPDHDGFHVLLSNIHASKGRWDDVLEVRGMMVRRGVVKIPGCSMIEANGIIHEFL 679
K++EL+PD+ + LL NI+A RW D+ EVR +V + K PG S+IE NG HEF+
Sbjct: 562 KILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFV 621
Query: 680 AGDRTHPQINEIDNMLDEMAKKLKLEGYAPDTLEVAFD 717
AGD++H Q EI L+E+A++ Y PDT E+ F+
Sbjct: 622 AGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 35/336 (10%)
Query: 281 LFMNMIDHRVMVDEVVVVSVLSACANLTVVKAGTSVHALAVKIGIECYINLQNALIHMYS 340
L M+ I + D +S+L C K +H+ ++ G+ Q
Sbjct: 21 LLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQ-------- 69
Query: 341 SCGEITTAEKLFDAGHNLDLISWNSMISGYLKCGSVEKARALFDAMIEKDVVSWSTMISG 400
+KLF + W S + G+ V A LF + E DVV W+ MI G
Sbjct: 70 --------KKLF--------VFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 401 YAQHDQFSETLSLFMEMQHHGIRPDEATLVSVISACTH-LVALDQGKWIHAYIRKNGLKI 459
+++ D E + L++ M G+ PD T +++ AL GK +H ++ K GL
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 460 NSILGTTLIDMYMKLGCVDNALEVFHGTEEKGVSSWNALIIGFAMNGLADKSLEMFSEMK 519
N + L+ MY G +D A VF ++ V SWN +I G+ ++S+E+ EM+
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 520 KSGVTPNEITFVGVLGACRHMGLVDEGHRHFNSMIQEHRLEPNSKHYGCMVDLLGRAGML 579
++ V+P +T + VL AC + D R + + E + EP+ + +V+ G +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKR-VHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 580 KEAEELIESMPMSPDVATWGALLGACKKHGDHEMGE 615
A + SM + DV +W +++ + G+ ++
Sbjct: 288 DIAVRIFRSMK-ARDVISWTSIVKGYVERGNLKLAR 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 284,905,542
Number of Sequences: 539616
Number of extensions: 11741979
Number of successful extensions: 37775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 27240
Number of HSP's gapped (non-prelim): 2674
length of query: 798
length of database: 191,569,459
effective HSP length: 126
effective length of query: 672
effective length of database: 123,577,843
effective search space: 83044310496
effective search space used: 83044310496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)