BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003747
(798 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302144008|emb|CBI23113.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/804 (58%), Positives = 597/804 (74%), Gaps = 69/804 (8%)
Query: 45 KKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAI 104
+K V +++LRVLEWDKLCHSVSSFA TSLGRE+T QLWS++QTYQ+SLRLLDETNAA+
Sbjct: 22 QKPSVHHQTLRVLEWDKLCHSVSSFASTSLGRESTWAQLWSLDQTYQESLRLLDETNAAL 81
Query: 105 EMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIK 164
E+ KHG C++D + +D LVKSAI+ RR P+ NEA+AVVALLQ +ETLQL+L+AAIK
Sbjct: 82 EIHKHGGCTMDFSTIDAVLVKSAIQHARRMLPVDGNEAMAVVALLQLAETLQLNLKAAIK 141
Query: 165 EDADLYIRFMPLTQM--------------------------------------------- 179
EDAD Y RFMP++++
Sbjct: 142 EDADWYKRFMPISEVIMGLVINRSLVKLIQQVVDEDGSVKDSASSALKQSRDQVRTLERK 201
Query: 180 LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLSFKGLLLSS-SGIGSVIEPLSAV 238
LYQLMD L+RN NE+ LEVS++ GR CI++GA+ + KGLLLSS SG+GS+IEPLSA+
Sbjct: 202 LYQLMDSLVRNNVNETSSLEVSNVDGRWCIKSGANLTNLKGLLLSSGSGVGSIIEPLSAI 261
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 298
PLNDELQ+ARA KAE DVLL LTEKMQ+DL++IEK+L+ +IQLDV+NARATY LSFGG
Sbjct: 262 PLNDELQKARALAAKAEADVLLKLTEKMQMDLEDIEKLLDSVIQLDVINARATYGLSFGG 321
Query: 299 TSPNIFLPQDMKRSLTHEPVTSKVSSS-----EREWTIYLPKAYHPLLLQQHKQKTQQAW 353
T P++FL ++ S T ++ +S +REWT++LPKAYHPLL+QQH++ Q+A
Sbjct: 322 TCPDLFLAENKNGSSTGAHLSGHGTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKAR 381
Query: 354 KDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLV 413
KD+ A +E RR+KL G K E D NLS EMQV+ LE + PVP+D FIA++TRVLV
Sbjct: 382 KDVSLAISEQRRKKLQGEKFNVKEETDINLSSLEMQVTRLEQSPPVPVDFFIAQRTRVLV 441
Query: 414 ITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTF 473
ITGPNTGGKTICLKTVGLA MMA+SGLH+L++E ++PWFD VFADIGDEQSLSQSLSTF
Sbjct: 442 ITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLSTF 501
Query: 474 SGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHG 533
SGHLKQI +I +QST+QSLVLLDE+GAGTNPLEG ALGMSLLE+FAE+G+LLTIATTHH
Sbjct: 502 SGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLESFAETGALLTIATTHHS 561
Query: 534 ELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQL 593
ELKTLKYSND FENACMEFDEV LKPTYKILWG+PGRS+AINIAERLG+P V+ AR+
Sbjct: 562 ELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQ 621
Query: 594 YGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFR 653
YGAASAEINEVII+MERFK +F E V++AR++LMLSR+L++NLL T+RK++EH +QR+
Sbjct: 622 YGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYG 681
Query: 654 KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHV 713
K++++S+AAA+ARS L+HK+ +QLR SA++ T K+QH
Sbjct: 682 KMREVSEAAAVARS------------------LLHKKVRQLRSSATRPSQPTAADKSQHA 723
Query: 714 LTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVE 773
++ Q T D E P T+ S + Q ++ +P VGD+VHVSS GKK TV++VE
Sbjct: 724 SATSNQHTAADINERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEVE 783
Query: 774 PSKEEIVVQVGNMKWIMKFTDIVT 797
SK ++VVQ GNMK +K TD+ T
Sbjct: 784 SSKGQLVVQAGNMKLKLKLTDVET 807
>gi|359490844|ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
Length = 791
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/805 (57%), Positives = 581/805 (72%), Gaps = 98/805 (12%)
Query: 45 KKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAI 104
+K V +++LRVLEWDKLCHSVSSFA TSLGRE+T QLWS++QTYQ+SLRLLDETNAA+
Sbjct: 33 QKPSVHHQTLRVLEWDKLCHSVSSFASTSLGRESTWAQLWSLDQTYQESLRLLDETNAAL 92
Query: 105 EMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIK 164
E+ KHG C++D + +D LVKSAI+ RR P+ NEA+AVVALLQ +ETLQL+L+AAIK
Sbjct: 93 EIHKHGGCTMDFSTIDAVLVKSAIQHARRMLPVDGNEAMAVVALLQLAETLQLNLKAAIK 152
Query: 165 EDADLYIRFMPLTQM--------------------------------------------- 179
EDAD Y RFMP++++
Sbjct: 153 EDADWYKRFMPISEVIMGLVINRSLVKLIQQVVDEDGSVKDSASSALKQSRDQVRTLERK 212
Query: 180 LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLSFKGLLLSS-SGIGSVIEPLSAV 238
LYQLMD L+RN NE+ LEVS++ GR CI++GA+ + KGLLLSS SG+GS+IEPLSA+
Sbjct: 213 LYQLMDSLVRNNVNETSSLEVSNVDGRWCIKSGANLTNLKGLLLSSGSGVGSIIEPLSAI 272
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 298
PLNDELQ+ARA KAE DVLL LTEKMQ+DL++IEK+L+ +IQLDV+NARATY LSFGG
Sbjct: 273 PLNDELQKARALAAKAEADVLLKLTEKMQMDLEDIEKLLDSVIQLDVINARATYGLSFGG 332
Query: 299 TSPNIFLPQDMKRSLTHEPVTSKVSSS-----EREWTIYLPKAYHPLLLQQHKQKTQQAW 353
T P++FL ++ S T ++ +S +REWT++LPKAYHPLL+QQH++ Q+A
Sbjct: 333 TCPDLFLAENKNGSSTGAHLSGHGTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKAR 392
Query: 354 KDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVS-ALELAHPVPIDIFIARKTRVL 412
KD+ A + VS LE + PVP+D FIA++TRVL
Sbjct: 393 KDVSLA----------------------------ISVSYVLEQSPPVPVDFFIAQRTRVL 424
Query: 413 VITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLST 472
VITGPNTGGKTICLKTVGLA MMA+SGLH+L++E ++PWFD VFADIGDEQSLSQSLST
Sbjct: 425 VITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLST 484
Query: 473 FSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHH 532
FSGHLKQI +I +QST+QSLVLLDE+GAGTNPLEG ALGMSLLE+FAE+G+LLTIATTHH
Sbjct: 485 FSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLESFAETGALLTIATTHH 544
Query: 533 GELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
ELKTLKYSND FENACMEFDEV LKPTYKILWG+PGRS+AINIAERLG+P V+ AR+
Sbjct: 545 SELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKARE 604
Query: 593 LYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRF 652
YGAASAEINEVII+MERFK +F E V++AR++LMLSR+L++NLL T+RK++EH +QR+
Sbjct: 605 QYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRY 664
Query: 653 RKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQH 712
K++++S+AAA+AR SL+HK+ +QLR SA++ T K+QH
Sbjct: 665 GKMREVSEAAAVAR------------------SLLHKKVRQLRSSATRPSQPTAADKSQH 706
Query: 713 VLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKV 772
++ Q T D E P T+ S + Q ++ +P VGD+VHVSS GKK TV++V
Sbjct: 707 ASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEV 766
Query: 773 EPSKEEIVVQVGNMKWIMKFTDIVT 797
E SK ++VVQ GNMK +K TD+ T
Sbjct: 767 ESSKGQLVVQAGNMKLKLKLTDVET 791
>gi|356498910|ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
Length = 792
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/798 (56%), Positives = 564/798 (70%), Gaps = 100/798 (12%)
Query: 51 YESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHG 110
++SLRVLEWDKLC V+SFA TSLGR+A QLWS+NQT+++SL+LL+ETNAA+EM KHG
Sbjct: 39 HDSLRVLEWDKLCDLVASFATTSLGRQALKDQLWSLNQTFEESLKLLEETNAAVEMNKHG 98
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
+ L L +D LVK+AI+ RR+ P+ EA A+VALLQ +E +Q L+A IKED D +
Sbjct: 99 TLRLHLGHLDAMLVKTAIQHARRSIPVSGYEARAIVALLQCAEIVQGDLKAVIKEDKDWH 158
Query: 171 IRFMPLTQMLY---------------------------------------------QLMD 185
RFMPLT+++ QL++
Sbjct: 159 NRFMPLTEVIMEFVINRSLIKAIEQVVDEDGSIKDSASPALKQARQQVQVIERKVQQLIE 218
Query: 186 MLIRNENNESLFLEVSSIHGRLCIRTGADQ-LSFKGLLLSS-SGIGSVIEPLSAVPLNDE 243
+IRNE +E+ LEV++I GR C+R + Q SFKGLLLSS SG+GS IEPLSAVPLNDE
Sbjct: 219 SIIRNEKSETSTLEVNNIDGRWCVRVDSGQKTSFKGLLLSSGSGVGSTIEPLSAVPLNDE 278
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
LQ+AR+ V KAE DVLLALT+KMQ+DLD+IEK LN +++LDV+NARATY LSFGG+SP+I
Sbjct: 279 LQRARSLVVKAEADVLLALTKKMQLDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHI 338
Query: 304 FLPQDMKRSLTHEPVTSKVSS------SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
FLP D S T E + + S+REWT+YL KAYHPLLLQ+HK+K
Sbjct: 339 FLP-DRSSSSTAEAFLPRSENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKL-------- 389
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
RK +K+ NL+ S+ +AL+ A PVP+D +++KTRV+VITGP
Sbjct: 390 -----------------RKAKKNVNLATSD---AALDNAPPVPVDFLVSQKTRVIVITGP 429
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKTICLKTVGLA MMAKSGL++L+SE A++PWFDSVFADIGDEQSLSQSLSTFSGHL
Sbjct: 430 NTGGKTICLKTVGLAAMMAKSGLYVLASESAQIPWFDSVFADIGDEQSLSQSLSTFSGHL 489
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
KQI NI SQSTSQSLVLLDE+GAGTNPLEG ALGM+LLE+FA+ LLT+ATTHHGELKT
Sbjct: 490 KQISNIKSQSTSQSLVLLDEVGAGTNPLEGAALGMALLESFAQDSCLLTMATTHHGELKT 549
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKYS++ FENACMEFDEV LKPTYK+LWGVPGRS+AINIAERLGLP +VV AR LYG+A
Sbjct: 550 LKYSDEAFENACMEFDEVNLKPTYKVLWGVPGRSNAINIAERLGLPSVVVDTARMLYGSA 609
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 657
SAEI+EVI +MER K ++ E + EARH+L SR L+ +LL TRRKI+E+ + RF+K++
Sbjct: 610 SAEIDEVITDMERLKQEYQELLDEARHYLRHSRGLYNSLLNTRRKIIEYSTNLRFKKMRD 669
Query: 658 ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 717
+S+AAA+ARS++HK ++L SA Q +Q + +S +L T K+Q V N
Sbjct: 670 VSEAAAMARSILHKKVRELDASAKQP-------SQNNKTISSSNLSAT--NKSQTV-AEN 719
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
+ T DK S+S VK +S R ++ P VGD+VHVSS GK+ TV+KV+ SK
Sbjct: 720 KEPTIADK-------SASSVKVFNRS-RSDKSGPPKVGDMVHVSSLGKQVTVLKVDSSKG 771
Query: 778 EIVVQVGNMKWIMKFTDI 795
EIVVQ GNMK +K TDI
Sbjct: 772 EIVVQAGNMKLKLKLTDI 789
>gi|224118552|ref|XP_002317849.1| predicted protein [Populus trichocarpa]
gi|222858522|gb|EEE96069.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/831 (55%), Positives = 556/831 (66%), Gaps = 126/831 (15%)
Query: 41 DSDDKKS--RVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLD 98
D + KKS Y SLR+LEWDKLC VSSFA TSLGREA QLWS+N TYQ SL LL
Sbjct: 81 DGNQKKSVNDARYSSLRILEWDKLCDLVSSFATTSLGREACKEQLWSLNHTYQHSLILLK 140
Query: 99 ETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRAS-PLRPNEALAVVALLQFSETLQL 157
ETNAA++M HG+C LD + ++L LVKS +R RR P+ NEA+AV A+L+ + LQL
Sbjct: 141 ETNAAVQMHNHGACRLDFSSINLLLVKSGLRNARRGGLPINANEAMAVAAILESAYFLQL 200
Query: 158 SLRAAIKEDADLYIRFMPLTQM-------------------------------------- 179
+L+AAIKEDAD Y RFMPL+Q+
Sbjct: 201 NLKAAIKEDADWYNRFMPLSQLIMEMVINVSLVRVIKQVIDEDGSVKDSASSALKRARDQ 260
Query: 180 -------LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSS-SGIGS 230
L QLMD LIRNE E+ FLEVS+I GR CI +G QL SF GLLLSS SG G
Sbjct: 261 VQLLEKKLSQLMDSLIRNEMKETSFLEVSNIDGRWCINSGTGQLTSFNGLLLSSDSGTGR 320
Query: 231 VIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARA 290
+IEPLSAVPLNDELQQARASV KAE DVLL LTEKM+ DLD+IEK+ + +IQLDV+NARA
Sbjct: 321 IIEPLSAVPLNDELQQARASVAKAEADVLLMLTEKMKKDLDDIEKVSDSVIQLDVINARA 380
Query: 291 TYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSS------SEREWTIYLPKAYHPLLLQQ 344
TYSL F G SP++ L +++ S + E S+ + EREW +Y+PKAYHPL+LQQ
Sbjct: 381 TYSLFFRGASPSLNLSEELDGSFSTETYLSENETLMASFPKEREWLLYMPKAYHPLMLQQ 440
Query: 345 HKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIF 404
H+Q Q+A K+ G NA+ VSAL+ A PVP+D F
Sbjct: 441 HRQNVQKAKKE--------------GSNAS--------------DVSALDQARPVPVDFF 472
Query: 405 IARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQ 464
I+ KTRVL ITGPNTGGKTICLKTVGLA MMAKSGLH+LSSE ++PWFDSVFADIGDEQ
Sbjct: 473 ISHKTRVLTITGPNTGGKTICLKTVGLAAMMAKSGLHVLSSESVEIPWFDSVFADIGDEQ 532
Query: 465 SLSQSLSTFSGHLKQIG------NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
SLSQSLSTFSGHLKQI N ++ S ++ L +GAGTNPLEG ALGMSLLE+F
Sbjct: 533 SLSQSLSTFSGHLKQISIREFPWN-LTDSPCRTFDLNPRVGAGTNPLEGAALGMSLLESF 591
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVP---------- 568
A+SG+LLTIATTHHGELK+LKYSND FENACMEFDEV LKPTYKILWGVP
Sbjct: 592 ADSGALLTIATTHHGELKSLKYSNDAFENACMEFDEVNLKPTYKILWGVPVTILHNITAA 651
Query: 569 ----GRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GRS+AINI+E+LGLP +VV NAR+L+GAASAEINEVII+MERFK E +HEARH
Sbjct: 652 VFPIGRSNAINISEKLGLPSVVVSNARELHGAASAEINEVIIDMERFKQDSQELLHEARH 711
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LMLS+NLH+ L RRKI EH QR+RK+++IS+AA++ARS++HK +QL A+Q
Sbjct: 712 HLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMARSILHKKVRQLRAHATQT- 770
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
+P+A Q + + TS+ + T K P + S+ V +I + P
Sbjct: 771 ---------FQPTADQ----------KQLSTSDSRFTAEAKNGRPTESMSTSVVEINKQP 811
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
TELP VGD+V VSS G+K TV++V+ SKEEI+VQ GNMK +K +I
Sbjct: 812 SA-MTELPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKLAEI 861
>gi|449438987|ref|XP_004137269.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 837
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/829 (52%), Positives = 569/829 (68%), Gaps = 78/829 (9%)
Query: 26 KNRRGRL-FCSTVAVSDSDDKKSR-----VVYESLRVLEWDKLCHSVSSFARTSLGREAT 79
+NR L F + +S S+D + + +SLR LEWDKLC SV+SFARTSLGR+A
Sbjct: 28 RNRTASLHFSLSANISVSNDIRDNTTQHSIRLDSLRALEWDKLCDSVASFARTSLGRQAI 87
Query: 80 LTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRP 139
QLWS N TY++SLRLLDETNAA+EM KHG CSLDL+GV+L LVKSAI +R+ +
Sbjct: 88 KAQLWSSNWTYEESLRLLDETNAAVEMHKHGGCSLDLSGVNLHLVKSAIEHAQRSLAMDG 147
Query: 140 NEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM-------------------- 179
NEA+A+ ALLQF++ LQ +L+ AIKED D RFMPLT +
Sbjct: 148 NEAIAIAALLQFADMLQFNLKTAIKEDVDWSTRFMPLTNVIMGMVVNQSLIKLILNAVDE 207
Query: 180 -------------------------LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGAD 214
L QLMD L+R+ + + FLEV + GR CI++ D
Sbjct: 208 DGSVKDSASYALRESRDQVRKLEKKLSQLMDSLVRSAKSGTSFLEVEIVDGRWCIKSEGD 267
Query: 215 QL-SFKGLLLSS-SGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE 272
QL KGLLLSS +GIGS IEP+SAVPLNDELQQARASV KAEEDVL LTEK+++D ++
Sbjct: 268 QLMDVKGLLLSSDAGIGSFIEPISAVPLNDELQQARASVAKAEEDVLFVLTEKVKMDFED 327
Query: 273 IEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSS----ERE 328
I K++ II+LDVVNARA+Y LSFGGT PN+ L + S+ + ++ S + + E
Sbjct: 328 ISKLIGCIIELDVVNARASYGLSFGGTCPNLVLLEGCNSSIANVCLSGDQSEASHLKKNE 387
Query: 329 WTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEM 388
W +YL +HPLLLQQ+++ + A +D+++A E+ R K GGN + K ++ ++S +M
Sbjct: 388 WVLYLQNTHHPLLLQQYRENLKNAKRDVKNAFNEMGR-KPPGGNMSWKEKEVIDISLFKM 446
Query: 389 QVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYA 448
+V LE A PV +D I+R+ +VLVITGPNTGGKT+CLKT+GLA MMAKSGLH+L+SE
Sbjct: 447 KVDQLEQARPVSVDFSISRRIKVLVITGPNTGGKTVCLKTIGLAAMMAKSGLHVLASESV 506
Query: 449 KVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGT 508
++PWFDS+FADIGDEQSL+QSLSTFSGHL++I +I S STSQSLVLLDE+GAGTNPLEG
Sbjct: 507 QIPWFDSIFADIGDEQSLTQSLSTFSGHLRKISDIQSVSTSQSLVLLDEVGAGTNPLEGA 566
Query: 509 ALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVP 568
ALGMSLLE+FA+SG+ LTIATTHHGELKTLKYSN+ FENACMEFDEV LKPTYKILWG+P
Sbjct: 567 ALGMSLLESFAKSGAALTIATTHHGELKTLKYSNEVFENACMEFDEVNLKPTYKILWGIP 626
Query: 569 GRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLML 628
GRS+AINIAERLGLP VV +AR+LYGA SA+I+EVI +ME K ++ + + EA++ L
Sbjct: 627 GRSNAINIAERLGLPSSVVDDARELYGAGSAQIDEVITDMECIKKKYGDLLQEAQNNLTE 686
Query: 629 SRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
S+NL++ LL RR I+EH QR RKVQ++++AA ARS +H+ ++L S + S
Sbjct: 687 SKNLYEKLLLARRNIIEHGRRQRLRKVQEVANAATTARSNLHQKGRELRASTIEYTS--- 743
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS-SVVKDIKQSPRVK 747
PSA + + N +TT K + A S DI Q P+ +
Sbjct: 744 -------PSAIDRMQRAGINSN--------NRTTAGKKDLMALRRQISSTSDISQ-PQSE 787
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
P VGD V+VSSFGKK TV+ VEPSK+E++V+VG++K +KFTDI+
Sbjct: 788 EPLFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGSIKLKLKFTDIM 836
>gi|334188381|ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
gi|332009066|gb|AED96449.1| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
Length = 796
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/832 (49%), Positives = 549/832 (65%), Gaps = 113/832 (13%)
Query: 22 AITNKNRRGRLFCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLT 81
+I N+NR S+ + + KS+ +SLRVLEWDKLC V+SFARTSLGREAT
Sbjct: 20 SIGNRNRVKLSLISSSSPTLVCHSKSKSQTDSLRVLEWDKLCDVVASFARTSLGREATKK 79
Query: 82 QLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNE 141
+LWS++Q++ +SL+LLDET+AAI+M +HGS LDL+ + +SLV+S IR +R LR ++
Sbjct: 80 KLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKRRLSLRADQ 139
Query: 142 ALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM---------------------- 179
AL V +LL+F E LQL L+AAIK+D D Y RFMPL+++
Sbjct: 140 ALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLVEQVIDPDG 199
Query: 180 -----------------------LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQL 216
L QL+D +IR++ ++ + + I GR CI+ ++QL
Sbjct: 200 TIKDSASSALRQSRERVQTLERKLQQLLDAIIRSQKDDESVMLAAEIDGRWCIQMSSNQL 259
Query: 217 SF--KGLLLSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+ LL S SG G+ EP++AV +ND+LQ ARASV KAE ++L LTEKMQ L +IE
Sbjct: 260 TSVNGLLLSSGSGGGTAAEPIAAVSMNDDLQSARASVAKAEAEILSMLTEKMQDGLCQIE 319
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLP-QDMKRSLT---HEP---VTSKVSSSER 327
+L+ IQLDV+NARATYS ++GG P+I+LP +D SL+ + P + S+ S++
Sbjct: 320 VVLSYSIQLDVINARATYSRAYGGAHPDIYLPPEDEVESLSAGENSPDINLPSEKPLSKK 379
Query: 328 EWTIYLPKAYHPLLLQQHKQ---KTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLS 384
EW +YLP+ YHPLLL QHK+ KT++ K ++A+T
Sbjct: 380 EWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHKTADT----------------------- 416
Query: 385 PSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
L A P+P D I++ TRVLVITGPNTGGKTICLK+VGLA MMAKSGL++L+
Sbjct: 417 -------VLSGAPPIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLA 469
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+E A++PWFD+++ADIGDEQSL QSLSTFSGHLKQI I+S STS+SLVLLDE+GAGTNP
Sbjct: 470 TESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNP 529
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
LEG ALGM++LE+FAESGSLLT+ATTHHGELKTLKYSN FENACMEFD++ LKPTYKIL
Sbjct: 530 LEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTYKIL 589
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
WGVPGRS+AINIA+RLGLP ++++AR+LYG+ASAEINEVI++MER+K ++ ++E+R
Sbjct: 590 WGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNESRV 649
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
++ LSR LH+NLL ++ I +H +R + Q+++ A ++ RS + ++ QQ SA +
Sbjct: 650 YIRLSRELHENLLTAQKNINDHSTKERRKMRQELTQAGSMTRSTLRRTLQQFRSSA--GK 707
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K A QL+ TKV +TT D E SSSVV+ + P
Sbjct: 708 SSQSKVATQLQ---------TKV------------KTTKD--EDNGIRSSSVVER-RPLP 743
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
++P VG V VSS GKK TV+KVE SK+EI+VQVG MK +K TD+V
Sbjct: 744 EAAAQKVPEVGSSVFVSSLGKKATVLKVEHSKKEILVQVGIMKMKVKLTDVV 795
>gi|357147017|ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
distachyon]
Length = 833
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/807 (46%), Positives = 523/807 (64%), Gaps = 92/807 (11%)
Query: 56 VLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCSL 114
+LEW K+C +V+SFA T+ GREAT QLW + +Y+ S RLL ET AA+ + S
Sbjct: 45 LLEWGKVCRAVASFAGTAHGREATEKQLWGVEDVSYERSRRLLQETEAAVRLLGTSGGSF 104
Query: 115 DLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFM 174
D +G+D V++AI+ V S ++ EA+AVV+L+ F E+LQ+++RAA+++D + + M
Sbjct: 105 DFSGLDTVTVEAAIQCVSGGSVIKGQEAMAVVSLMLFVESLQVTIRAAMRQDEESHNLLM 164
Query: 175 PLTQM---------------------------------------------LYQLMDMLIR 189
PLT+ L QLMD LIR
Sbjct: 165 PLTETILEAVVNKSLVKSIQDIIDDDGSVKDTASPELRRYREQVQSLESRLCQLMDRLIR 224
Query: 190 NENNESLFLEVSSIHGRLCIR-TGADQLSFKGLLLS-------SSGIGSVIEPLSAVPLN 241
N ++E+ EVS ++GR CI+ TG LSF GLLLS S GS+IEP+ AVPLN
Sbjct: 225 NSDSEASLSEVSIVNGRCCIKVTGDKSLSFDGLLLSRCVYXRCGSDAGSMIEPIVAVPLN 284
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
DELQ ARA V +AE D L LT+K+ ++LD I+ +L I LD V ARA YS+++ GT P
Sbjct: 285 DELQGARALVARAELDALSKLTDKILLELDNIQILLQETITLDKVTARAKYSIAYDGTLP 344
Query: 302 NIFLPQ---DMKRSLTHEPVTSKVSSS--EREWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
+++LP+ + + T PV++ S+ ++ W +++P A+HPLLLQQH++ ++ KD+
Sbjct: 345 DLYLPKFEHETVNTATDWPVSATSSAQLPKKPWKVFIPNAFHPLLLQQHQENLRRIKKDV 404
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
SA E+RRR++YG + A + + ++L + +VS LE HP+P+D I +T VLVITG
Sbjct: 405 ASATAEIRRRRIYGQDIAEEDQLASDLDSMKNRVSKLERNHPIPVDFMIGEETTVLVITG 464
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKTI LKTVGLA +MAK GL+IL+SE K+PWFD+V+ADIGDEQSL+QSLSTFSGH
Sbjct: 465 PNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFDAVYADIGDEQSLTQSLSTFSGH 524
Query: 477 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
LKQIG I +QSTSQSLVLLDE+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGELK
Sbjct: 525 LKQIGAIRAQSTSQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELK 584
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 596
TLKYSND FENAC+EFDE LKPT++ILWG+PGRS+AINIAERLGLP ++++AR L G
Sbjct: 585 TLKYSNDSFENACVEFDEENLKPTFRILWGIPGRSNAINIAERLGLPLDIIESARHLLGT 644
Query: 597 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ 656
A AEIN +I++ME+FK ++ E + +A+H+LM SR LH NL ++ +++H +QR RK +
Sbjct: 645 AGAEINALIMDMEKFKQEYDEQLQQAQHYLMQSRELHNNLEVAQKNVMDHTIAQRKRKSR 704
Query: 657 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 716
+S+ A +ARS++HK QQ SA R L +RA
Sbjct: 705 VVSEYAVMARSIIHKKFQQFRESAIAQRVLEEERA------------------------- 739
Query: 717 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE-------LPNVGDLVHVSSFGKKGTV 769
++ ++V+ P +S+S +K + + TE +P VGDLV+V + TV
Sbjct: 740 -VEKAKSERVKGPEPSSTSAIKMAQNTNSSMATEANDEDGGIPEVGDLVYVPKLKNQATV 798
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+K++ SK E+ +Q G MK +K D+V
Sbjct: 799 VKIDSSKNEVQIQAGMMKLKLKLKDVV 825
>gi|222613119|gb|EEE51251.1| hypothetical protein OsJ_32115 [Oryza sativa Japonica Group]
Length = 845
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/810 (46%), Positives = 521/810 (64%), Gaps = 87/810 (10%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGS 111
SLR+LEW K+C +V+SFA T+ GRE T TQLW + +Y+ S RLL+ET AA+ +
Sbjct: 48 SLRLLEWGKVCDAVASFAGTAHGRETTKTQLWEVEDVSYEQSRRLLEETGAAVRLIDSAG 107
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
+D +G+D +V+SAI V + ++ EA+A+V+L+ F E+LQ++++AA+K+D D +
Sbjct: 108 GGIDFSGLDTVMVESAIHGVSGGAVIKGQEAMAIVSLMLFVESLQVTIKAAMKQDEDSHE 167
Query: 172 RFMPLTQM---------------------------------------------LYQLMDM 186
R + LT+ LYQLMD
Sbjct: 168 RLISLTETILDADINKSLVKSIQDVIDDDGSIKDTASPELRRYREQVQVLESRLYQLMDK 227
Query: 187 LIRNENNES----LFLEVSSIHGRLCIRTGADQLS-FKGLLLSS-SGIGSVIEPLSAVPL 240
L+RN +NE+ LF EV ++GR CI+ D+ S F GLLLSS + GS++EP+ AVPL
Sbjct: 228 LVRNADNEASVSVLFHEVCIVNGRCCIKVTGDKSSPFDGLLLSSGTDAGSMVEPIVAVPL 287
Query: 241 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 300
NDELQQARA V KAE D L +T+K+ ++LD I +L ++LD V ARA YS+++ GT
Sbjct: 288 NDELQQARALVAKAELDALSKMTDKILLELDNIRILLQATVELDKVAARAKYSIAYDGTY 347
Query: 301 PNIFLPQDMKRSLTHEP--VTSKVSS---SEREWTIYLPKAYHPLLLQQHKQKTQQAWKD 355
P+++LP + +++ S +SS S++ W + +P AYHPLLLQQH++ +A KD
Sbjct: 348 PDLYLPNFVNGTVSTATGGSISTISSAHLSKKAWKLCMPNAYHPLLLQQHQENLHRAKKD 407
Query: 356 LESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVIT 415
+ SA E+RRR++YG + + + ++L +++VS +E PVP+D FIA T VLVIT
Sbjct: 408 VASATAEIRRRRIYGQDNVEEDQLASDLDLMKIRVSQMEKDRPVPVDFFIAEGTTVLVIT 467
Query: 416 GPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSG 475
GPNTGGKTI LKTVGLA +MAK GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSG
Sbjct: 468 GPNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSG 527
Query: 476 HLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 535
HLKQIG I + STSQSLVLLDE+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGEL
Sbjct: 528 HLKQIGAIRAWSTSQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGEL 587
Query: 536 KTLKY---------SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIV 586
KTLKY SND FENACMEFDE LKPT++ILWG+PGRS+AINIAERLGLP +
Sbjct: 588 KTLKYRAHYIVHTFSNDLFENACMEFDEDNLKPTFRILWGIPGRSNAINIAERLGLPSDI 647
Query: 587 VQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEH 646
++++RQL G A AEIN +I++ME FK Q+ H+ EA++++M S+ LH NL ++ I++H
Sbjct: 648 IESSRQLLGTAGAEINALIMDMENFKQQYQHHLQEAQYYVMQSKELHNNLEVAQKNIIDH 707
Query: 647 CASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA-QQLRPSASQSLHCT 705
++QR RK + IS+ A +ARS++ K QQ SA R L ++A Q +P + T
Sbjct: 708 TSAQRKRKARVISEYAVMARSIIRKKFQQFRESAIAKRVLEEEKAVQNDKPERLKDPEPT 767
Query: 706 KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGK 765
+ +N T + E +P VGDLV+V
Sbjct: 768 STPAVKKAQNTNISMATTTEGEDNG--------------------IPEVGDLVYVPKLKN 807
Query: 766 KGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ TV+K++ SK E+ VQ G MK +KF D+
Sbjct: 808 EATVVKIDSSKNEVQVQAGIMKLKLKFKDV 837
>gi|8809580|dbj|BAA97131.1| DNA mismatch repair protein MutS2-like [Arabidopsis thaliana]
Length = 795
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/851 (47%), Positives = 542/851 (63%), Gaps = 152/851 (17%)
Query: 22 AITNKNRRGRLFCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLT 81
+I N+NR S+ + + KS+ +SLRVLEWDKLC V+SFARTSLGREAT
Sbjct: 20 SIGNRNRVKLSLISSSSPTLVCHSKSKSQTDSLRVLEWDKLCDVVASFARTSLGREATKK 79
Query: 82 QLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNE 141
+LWS++Q++ +SL+LLDET+AAI+M +HGS LDL+ + +SLV+S IR +R LR ++
Sbjct: 80 KLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKRRLSLRADQ 139
Query: 142 ALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM---------------------- 179
AL V +LL+F E LQL L+AAIK+D D Y RFMPL+++
Sbjct: 140 ALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLVEQVIDPDG 199
Query: 180 -----------------------LYQLMDMLIRNE-NNESLFLE---VSSIHGRLCIRTG 212
L QL+D +IR++ ++ES+ ++ + I GR CI+
Sbjct: 200 TIKDSASSALRQSRERVQTLERKLQQLLDAIIRSQKDDESVMIKFQLAAEIDGRWCIQMS 259
Query: 213 ADQL-SFKGLLLSS----------------SGIGSVIEPLSAVPLNDELQQARASVTKAE 255
++QL S GLLLSS SG G+ EP++AV +ND+LQ ARASV KAE
Sbjct: 260 SNQLTSVNGLLLSSVYFQVLSLEDNMCFSGSGGGTAAEPIAAVSMNDDLQSARASVAKAE 319
Query: 256 EDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP-QDMKRSLT 314
++L LTEK +NARATYS ++GG P+I+LP +D SL+
Sbjct: 320 AEILSMLTEK--------------------INARATYSRAYGGAHPDIYLPPEDEVESLS 359
Query: 315 ---HEP---VTSKVSSSEREWTIYLPKAYHPLLLQQHKQ---KTQQAWKDLESANTELRR 365
+ P + S+ S++EW +YLP+ YHPLLL QHK+ KT++ K ++A+T
Sbjct: 360 AGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHKTADT---- 415
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTIC 425
L A P+P D I++ TRVLVITGPNTGGKTIC
Sbjct: 416 --------------------------VLSGAPPIPADFQISKGTRVLVITGPNTGGKTIC 449
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LK+VGLA MMAKSGL++L++E A++PWFD+++ADIGDEQSL QSLSTFSGHLKQI I+S
Sbjct: 450 LKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILS 509
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
STS+SLVLLDE+GAGTNPLEG ALGM++LE+FAESGSLLT+ATTHHGELKTLKYSN F
Sbjct: 510 HSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAF 569
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
ENACMEFD++ LKPTYKILWGVPGRS+AINIA+RLGLP ++++AR+LYG+ASAEINEVI
Sbjct: 570 ENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVI 629
Query: 606 IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIA 665
++MER+K ++ ++E+R ++ LSR LH+NLL ++ I +H +R + Q+++ A ++
Sbjct: 630 LDMERYKQEYQRLLNESRVYIRLSRELHENLLTAQKNINDHSTKERRKMRQELTQAGSMT 689
Query: 666 RSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK 725
RS + ++ QQ SA +S K A QL+ TKV +TT D
Sbjct: 690 RSTLRRTLQQFRSSA--GKSSQSKVATQLQ---------TKV------------KTTKD- 725
Query: 726 VEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGN 785
E SSSVV+ + P ++P VG V VSS GKK TV+KVE SK+EI+VQVG
Sbjct: 726 -EDNGIRSSSVVER-RPLPEAAAQKVPEVGSSVFVSSLGKKATVLKVEHSKKEILVQVGI 783
Query: 786 MKWIMKFTDIV 796
MK +K TD+V
Sbjct: 784 MKMKVKLTDVV 794
>gi|22267591|gb|AAM94926.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
Length = 810
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/776 (48%), Positives = 517/776 (66%), Gaps = 54/776 (6%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGS 111
SLR+LEW K+C +V+SFA T+ GRE T TQLW + +Y+ S RLL+ET AA+ +
Sbjct: 48 SLRLLEWGKVCDAVASFAGTAHGRETTKTQLWEVEDVSYEQSRRLLEETGAAVRLIDSAG 107
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQL-------SLRAAIK 164
+D +G+D +V+SAI V + ++ EA+A+V+L+ F E+LQ+ SL +I+
Sbjct: 108 GGIDFSGLDTVMVESAIHGVSGGAVIKGQEAMAIVSLMLFVESLQILDADINKSLVKSIQ 167
Query: 165 EDADLYIRFMPLTQML----YQLMDMLIRNENNES----LFLEVSSIHGRLCIRTGADQL 216
+ +L R+ Q+L YQLMD L+RN +NE+ LF EV ++GR CI+ D+
Sbjct: 168 DSPELR-RYREQVQVLESRLYQLMDKLVRNADNEASVSVLFHEVCIVNGRCCIKVTGDKS 226
Query: 217 S-FKGLLLSS-SGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S F GLLLSS + GS++EP+ AVPLNDELQQARA V KAE D L +T+K+ ++LD I
Sbjct: 227 SPFDGLLLSSGTDAGSMVEPIVAVPLNDELQQARALVAKAELDALSKMTDKILLELDNIR 286
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEP--VTSKVSS---SEREW 329
+L ++LD V ARA YS+++ GT P+++LP + +++ S +SS S++ W
Sbjct: 287 ILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSISTISSAHLSKKAW 346
Query: 330 TIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQ 389
+ +P AYHPLLLQQH++ +A KD+ SA E+RRR++YG + + + ++L +++
Sbjct: 347 KLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQLASDLDLMKIR 406
Query: 390 VSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAK 449
VS +E PVP+D FIA T VLVITGPNTGGKTI LKTVGLA +MAK GL+IL+SE K
Sbjct: 407 VSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPVK 466
Query: 450 VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTA 509
+PWF++V+ADIGDEQSL+QSLSTFSGHLKQIG I + STSQSLVLLDE+GAGTNPLEG A
Sbjct: 467 IPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVGAGTNPLEGAA 526
Query: 510 LGMSLLEAFAESGSLLTIATTHHGELKTLKY---------SNDFFENACMEFDEVKLKPT 560
LGMSLLE+FAE+GS LT+ATTHHGELKTLKY SND FENACMEFDE LKPT
Sbjct: 527 LGMSLLESFAEAGSFLTLATTHHGELKTLKYRAHYIVHTFSNDLFENACMEFDEDNLKPT 586
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
++ILWG+PGRS+AINIAERLGLP +++++RQL G A AEIN +I++ME FK Q+ H+
Sbjct: 587 FRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQYQHHLQ 646
Query: 621 EARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
EA++++M S+ LH NL ++ I++H ++QR RK + IS+ A +ARS++ K QQ SA
Sbjct: 647 EAQYYVMQSKELHNNLEVAQKNIIDHTSAQRKRKARVISEYAVMARSIIRKKFQQFRESA 706
Query: 681 SQARSLVHKRA-QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD 739
R L ++A Q +P + T + +N T + E
Sbjct: 707 IAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTNISMATTTEGEDNG--------- 757
Query: 740 IKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P VGDLV+V + TV+K++ SK E+ VQ G MK +KF D+
Sbjct: 758 -----------IPEVGDLVYVPKLKNEATVVKIDSSKNEVQVQAGIMKLKLKFKDV 802
>gi|242039141|ref|XP_002466965.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
gi|241920819|gb|EER93963.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
Length = 831
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/798 (47%), Positives = 522/798 (65%), Gaps = 82/798 (10%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCS 113
R+LEW K+C +V+SFA T+ GR+AT QLW + +Y+ S RLL ET AA+ + + +
Sbjct: 50 RLLEWGKVCDAVASFAGTAHGRDATKKQLWEVEDVSYEQSQRLLQETEAAVWLLDNAGGA 109
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+D +G+D ++SAI V + ++ EA+AV +L+ F E+LQ++++AAIK D R
Sbjct: 110 MDFSGLDTVAIESAIHCVSGGAVIKGLEAMAVASLMLFVESLQVNIKAAIKLDEGSRSRL 169
Query: 174 MPLTQM---------------------------------------------LYQLMDMLI 188
LT+ LYQLMD L+
Sbjct: 170 TTLTETILDAVINKSLVKSIQDIIDDDGSVKDTASPELRRYRDQVQRLESRLYQLMDKLM 229
Query: 189 RNENNESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSS-SGIGSVIEPLSAVPLNDELQQ 246
RN ++E+ EV ++GR CIRT D S F GLLLSS SG GS+IEP++A+PLNDELQ+
Sbjct: 230 RNADDEASLSEVCIVNGRCCIRTTTDNSSIFDGLLLSSGSGAGSMIEPIAAIPLNDELQE 289
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+RA V KAE DVL LT+K+ +DLD I+ +L I+LD + ARA YS+++ GT P+++LP
Sbjct: 290 SRALVAKAELDVLSKLTDKILLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLP 349
Query: 307 QDMKRSLTHEPVTS--KVSSSE---REWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANT 361
++T S ++SS++ + W +Y+P AYHPLLLQ+H++ +A +D+ SA
Sbjct: 350 NFENETVTSATCGSVEQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDVASATA 409
Query: 362 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 421
E+RRR++YG + A + + ++L +++VS LE PVP+D +A +T VLVITGPNTGG
Sbjct: 410 EIRRRRIYGQDIA-EDQLASDLDSMKLRVSQLEKDQPVPVDFMVAEETTVLVITGPNTGG 468
Query: 422 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 481
KTI LKTVGLA +MAK GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSGHLKQIG
Sbjct: 469 KTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIG 528
Query: 482 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
I ++STS+SLVLLDE+GAGTNPLEG ALGMSLLE+FA++GS LT+ATTHHGELKTLKYS
Sbjct: 529 AIRAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFADAGSFLTLATTHHGELKTLKYS 588
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
N+ FENACMEFDE LKPT+KILWG+PGRS+AINIAERLGLP +V+++R L G A AEI
Sbjct: 589 NNSFENACMEFDEENLKPTFKILWGIPGRSNAINIAERLGLPLDIVESSRHLLGTAGAEI 648
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
N +I++MERFK ++ +H+ EA++ LM S+ LH NL ++ I++H ++QR RK + IS+
Sbjct: 649 NALIMDMERFKQEYQQHLQEAQYLLMQSKELHNNLELAQKNIVDHTSAQRKRKARVISEY 708
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHC----TKVGKNQHVLTSN 717
A +ARS++ K QQL SA R L ++A S + H + +GK Q++ T N
Sbjct: 709 AVMARSIIRKKFQQLQESAIAER-LKEEKAVNDAKSDTVKDHVLANTSAIGKTQNIDT-N 766
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
T D +P VGD V+V + TV+K++ SK+
Sbjct: 767 LGMATND----------------------DEGGVPEVGDSVYVPKLKNEATVVKIDLSKD 804
Query: 778 EIVVQVGNMKWIMKFTDI 795
E+ VQ G MK +K D+
Sbjct: 805 EVQVQAGMMKLKLKLKDV 822
>gi|297796263|ref|XP_002866016.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311851|gb|EFH42275.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 796
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/871 (46%), Positives = 545/871 (62%), Gaps = 160/871 (18%)
Query: 6 AFGDSISIPIFNTKSFAITNKNRRGRLFCSTVAVSDSD---DKKSRVVYESLRVLEWDKL 62
AF ++ ++ I N+ I N+NR R+ S ++ S KS+ +SLRVLEWDKL
Sbjct: 5 AFCNNCALVIRNS----IGNRNR-NRVNLSLISSSSPTLVCRSKSKSQTDSLRVLEWDKL 59
Query: 63 CHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLS 122
C V+SFARTSLGREAT +LWS++Q++ +SL+LLDET+AAI+M +HGS LDL+ + +S
Sbjct: 60 CDVVASFARTSLGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHIS 119
Query: 123 LVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM--- 179
LV+S IR +R LR ++AL + +LL+F +TLQ L+AAIK+D D Y RFMPL+++
Sbjct: 120 LVESGIRHAKRRLSLRADQALEIASLLRFFDTLQFDLKAAIKQDGDWYKRFMPLSELIMH 179
Query: 180 ------------------------------------------LYQLMDMLIRNENNESLF 197
L QL+D +IR++ ++
Sbjct: 180 PVINRSFVKLVEQVIDPDGTIKDSASSALRQSRERVQTLERKLQQLLDAIIRSQKDDESV 239
Query: 198 LEVSSIHGRLCIRTGADQL----------------------SFKG-LLLSSSGIGSVIEP 234
L + I GR CI+ ++QL S +G + S SG G+V EP
Sbjct: 240 LVAAEIDGRWCIQMSSNQLTSVNGLLLSSYASLSMIYFHILSLEGNMCFSGSGGGTVAEP 299
Query: 235 LSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 294
++AV +ND+LQ ARASV KAE ++L LTEK +NARATYS
Sbjct: 300 IAAVSMNDDLQSARASVAKAEAEILSMLTEK--------------------INARATYSR 339
Query: 295 SFGGTSPNIFLP-QDMKRSLT------HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQ 347
++GG P+I+LP +D SL+ ++S+ S +EW +YLP+ YHPLLL QHK+
Sbjct: 340 AYGGAHPDIYLPPEDGVESLSAGENSLQSNLSSEKSLPRKEWLLYLPRCYHPLLLYQHKK 399
Query: 348 KTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIAR 407
++ + ++ T DT LS + P+P D I++
Sbjct: 400 GIRKTRETIKFHKT-----------------ADTVLSGTP----------PIPADFQISK 432
Query: 408 KTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLS 467
TRVLVITGPNTGGKTICLK+VGLA MMAKSGL++L++E A++PWFD+++ADIGDEQSL
Sbjct: 433 GTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLL 492
Query: 468 QSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTI 527
QSLSTFSGHLKQI I+S STS+SLVLLDE+GAGTNPLEG ALGM++LE+FAESGSLLT+
Sbjct: 493 QSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTM 552
Query: 528 ATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVV 587
ATTHHGELKTLKYSN FENACMEFD++ LKPT+KILWGVPGRS+AINIAERLGLP ++
Sbjct: 553 ATTHHGELKTLKYSNSAFENACMEFDDLNLKPTFKILWGVPGRSNAINIAERLGLPCDII 612
Query: 588 QNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
++AR+LYG+ASAEINEVI++MER+K ++ ++E+R ++ LSR LH NLL ++ I +H
Sbjct: 613 ESARELYGSASAEINEVILDMERYKQEYQRLLNESRVYIRLSRELHDNLLIAQKNINDHA 672
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
+R + Q+++ A ++ RS + ++ QQ +S A+S K A QL+ TKV
Sbjct: 673 TKERRKMRQELTQAGSMTRSTLRRTLQQF--RSSAAQSSQSKVATQLQ---------TKV 721
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVV--KDIKQSPRVKRTELPNVGDLVHVSSFGK 765
+TT D E SSSVV + I ++ K +P VG V VSS GK
Sbjct: 722 ------------ETTKD--EDSGIRSSSVVERRPISEAAAQK---VPEVGSSVFVSSLGK 764
Query: 766 KGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
K TV+KVE SK+EI+VQVG MK +K TD+V
Sbjct: 765 KATVLKVEQSKKEILVQVGIMKMKVKLTDVV 795
>gi|218184860|gb|EEC67287.1| hypothetical protein OsI_34270 [Oryza sativa Indica Group]
Length = 787
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/782 (46%), Positives = 499/782 (63%), Gaps = 87/782 (11%)
Query: 81 TQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRP 139
TQLW + +Y+ S RLL+ET AA+ + +D +G+D +V+SAI V + ++
Sbjct: 18 TQLWEVEDVSYEQSRRLLEETGAAVRLIDSAGGGIDFSGLDTVMVESAIHGVSGGAVIKG 77
Query: 140 NEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM-------------------- 179
EA+A+V+L+ F E+LQ++++AA+K+D D + R + LT+
Sbjct: 78 QEAMAIVSLMLFVESLQVTIKAAMKQDEDSHERLISLTETILDADINKSLVKSIQDVIDD 137
Query: 180 -------------------------LYQLMDMLIRNENNES----LFLEVSSIHGRLCIR 210
LYQLMD L+RN +NE+ LF EV ++GR CI+
Sbjct: 138 DGSIKDTASPELRRYREQVQVLESRLYQLMDKLVRNADNEASVSVLFHEVCIVNGRCCIK 197
Query: 211 TGADQLS-FKGLLLSS-SGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQV 268
D+ S F GLLLSS + GS++EP+ AVPLNDELQQARA V KAE D L +T+K+ +
Sbjct: 198 VTGDKSSPFDGLLLSSGTDAGSMVEPIVAVPLNDELQQARALVAKAELDALSKMTDKILL 257
Query: 269 DLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEP--VTSKVSS-- 324
+LD I +L ++LD V ARA YS+++ GT P+++LP + +++ S +SS
Sbjct: 258 ELDNIRILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSISTISSAH 317
Query: 325 -SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNL 383
S++ W + +P AYHPLLLQQH++ +A KD+ SA E+RRR++YG + + + ++L
Sbjct: 318 LSKKAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQLASDL 377
Query: 384 SPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
+++VS +E PVP+D FIA T VLVITGPNTGGKTI LKTVGLA +MAK GL+IL
Sbjct: 378 DLIKIRVSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIGLYIL 437
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+SE K+PWF++V+ADIGDEQSL+QSLSTFSGHLKQIG I + STSQSLVLLDE+GAGTN
Sbjct: 438 ASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVGAGTN 497
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY---------SNDFFENACMEFDE 554
PLEG ALGMSLLE+FAE+GS LT+ATTHHGELKTLKY SND FENACMEFDE
Sbjct: 498 PLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRAHYIVHTFSNDLFENACMEFDE 557
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQ 614
LKPT++ILWG+PGRS+AINIAERLGLP +++++RQL G A AEIN +I++ME FK Q
Sbjct: 558 DNLKPTFRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQ 617
Query: 615 FLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQ 674
+ H+ EA++++M S+ LH NL ++ I++H ++QR RK + IS+ A +ARS++ K Q
Sbjct: 618 YQHHLQEAQYYVMQSKELHNNLEVAQKNIIDHTSAQRKRKARVISEYAVMARSIIRKKFQ 677
Query: 675 QLCPSASQARSLVHKRA-QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS 733
Q SA R L ++A Q +P + T + +N T + E
Sbjct: 678 QFRESAIAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTNISMATTTEGEDNG--- 734
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
+P VGDLV+V + TV+K++ SK E+ VQ G MK +KF
Sbjct: 735 -----------------IPEVGDLVYVPKLKNEATVVKIDSSKNEVQVQAGIMKLKLKFK 777
Query: 794 DI 795
D+
Sbjct: 778 DV 779
>gi|413933872|gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Zea mays]
Length = 859
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/836 (44%), Positives = 520/836 (62%), Gaps = 126/836 (15%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCS 113
R+LEW K+C +V+SFA T+ GR+AT QLW + +Y+ S LL ET AA+ + + +
Sbjct: 50 RLLEWGKVCDAVASFAGTAHGRDATTKQLWEVEDVSYEQSQMLLQETEAAVLLLDNAGGA 109
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+D +G+D ++SAI V + ++ EA+AV +L+ F E+LQ++++AA+K D R
Sbjct: 110 MDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSLMMFVESLQVNIKAAMKLDEGSCSRL 169
Query: 174 MPLTQM---------------------------------------------LYQLMDMLI 188
LT+ LYQLMD L+
Sbjct: 170 TTLTETILDAVINKSLVKSIQDIVDDDGSVKDTASPELRRYREQVQRLENRLYQLMDKLM 229
Query: 189 RNENNESLFLEVSSIHGRLCIRTGADQLSF-KGLLLSS-SGIGSVIEPLSAVPLNDELQQ 246
RN ++E+ EV ++GR CIRT D SF GLLLSS S GS+IEP+ AVPLNDELQ+
Sbjct: 230 RNADDEASLSEVCIVNGRCCIRTTMDNSSFFDGLLLSSRSDAGSMIEPIVAVPLNDELQE 289
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+RA V KAE DVL LT+K+++DLD I+ +L I+LD + ARA YS+++ GT P+++LP
Sbjct: 290 SRALVAKAELDVLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLP 349
Query: 307 QDMKRSLTHEPVTS-------KVSSSE---REWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
+ +E VTS ++SS++ + W +Y+P AYHPLLLQ+H++ +A +D+
Sbjct: 350 -----NFENETVTSATGGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDV 404
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
SA E+RRR++YG + A + + ++L +++VS LE PVP+D IA +T VLVITG
Sbjct: 405 ASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITG 464
Query: 417 PNTGGKTICLKTVGLAVMMAKS------------------------GLHILSSEYAKVPW 452
PNTGGKTI LKTVGLA +MAK GL+IL+SE K+PW
Sbjct: 465 PNTGGKTISLKTVGLASLMAKIVAKLAAVVTVVVSCRLLVADGATLGLYILASEPVKIPW 524
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F++V+ADIGDEQSL+QSLSTFSGHLKQIG I ++STS+SLVLLDE+GAGTNPLEG ALGM
Sbjct: 525 FNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGAALGM 584
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYS------NDFFENACMEFDEVKLKPTYKILWG 566
SLLE+FAE+GS LT+ATTHHGELKTLKY N+ FENACMEFDE LKPT+KILWG
Sbjct: 585 SLLESFAEAGSFLTLATTHHGELKTLKYRLHFFLHNNSFENACMEFDEENLKPTFKILWG 644
Query: 567 VPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL 626
+PGRS+AINI ERLGLP +V+++R+L G A AEIN +I++MER K ++ +H+ EA++ L
Sbjct: 645 IPGRSNAINITERLGLPLDIVESSRRLLGTAGAEINALIMDMERLKQEYQQHLQEAQYLL 704
Query: 627 MLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
M S+ LH NL ++ I++H ++QR RK + IS+ A +ARS++ K QQ SA R
Sbjct: 705 MQSKELHNNLELAQKSIVDHTSAQRKRKARVISEYAVMARSIIRKKFQQFQESAIAER-- 762
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ---- 742
V + + + S D+V+ P A++S + +I+
Sbjct: 763 VKEEENAVNDAKS------------------------DRVKDPMPANTSAIGNIQNIDTS 798
Query: 743 ---SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ E+P VGD V+V + TV+K++ SK E+ VQ G MK +K D+
Sbjct: 799 LGMTANDDEDEVPEVGDSVYVPKLKNEATVVKIDSSKNEVQVQAGMMKLKLKLKDV 854
>gi|413933876|gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
Length = 864
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/839 (43%), Positives = 509/839 (60%), Gaps = 131/839 (15%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCS 113
R+LEW K+C +V+SFA T+ GR+AT QLW + +Y+ S LL ET AA+ + + +
Sbjct: 50 RLLEWGKVCDAVASFAGTAHGRDATTKQLWEVEDVSYEQSQMLLQETEAAVLLLDNAGGA 109
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+D +G+D ++SAI V + ++ EA+AV +L+ F E+LQ++++AA+K D R
Sbjct: 110 MDFSGLDT--IESAIHSVSGGAVIKGLEAMAVTSLMMFVESLQVNIKAAMKLDEGSCSRL 167
Query: 174 MPLTQM---------------------------------------------LYQLMDMLI 188
LT+ LYQLMD L+
Sbjct: 168 TTLTETILDAVINKSLVKSIQDIVDDDGSVKDTASPELRRYREQVQRLENRLYQLMDKLM 227
Query: 189 RNENNESLFLEVSSIHGRLCIRTGADQLSF-KGLLLSS-SGIGSVIEPLSAVPLNDELQQ 246
RN ++E+ EV ++GR CIRT D SF GLLLSS S GS+IEP+ AVPLNDELQ+
Sbjct: 228 RNADDEASLSEVCIVNGRCCIRTTMDNSSFFDGLLLSSRSDAGSMIEPIVAVPLNDELQE 287
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+RA V KAE DVL LT+K+++DLD I+ +L I+LD + ARA YS+++ GT P+++LP
Sbjct: 288 SRALVAKAELDVLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLP 347
Query: 307 QDMKRSLTHEPVTS-------KVSSSE---REWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
+ +E VTS ++SS++ + W +Y+P AYHPLLLQ+H++ +A +D+
Sbjct: 348 -----NFENETVTSATGGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDV 402
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
SA E+RRR++YG + A + + ++L +++VS LE PVP+D IA +T VLVITG
Sbjct: 403 ASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITG 462
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKTI LKTVGLA +MAK GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSGH
Sbjct: 463 PNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGH 522
Query: 477 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
LKQIG I ++STS+SLVLLDE+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGELK
Sbjct: 523 LKQIGAIRAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELK 582
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 596
TLKYSN+ FENACMEFDE LKPT+KILWG+PGRS+AINI ERLGLP +V+++R+L G
Sbjct: 583 TLKYSNNSFENACMEFDEENLKPTFKILWGIPGRSNAINITERLGLPLDIVESSRRLLGT 642
Query: 597 ASAEINEVI--------------------------------IEMERFKTQF-LEHVHEAR 623
A AEIN V ++ KTQ +
Sbjct: 643 AGAEINAVCFFGHFSVLRTCTWFCCPKYLVMILSSRSSSSAVDNGHGKTQTRISTTSSGG 702
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
S+ LH NL ++ I++H ++QR RK + IS+ A +ARS++ K QQ SA
Sbjct: 703 TISSYSKELHNNLELAQKSIVDHTSAQRKRKARVISEYAVMARSIIRKKFQQFQESAIAE 762
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ- 742
R V + + + S D+V+ P A++S + +I+
Sbjct: 763 R--VKEEENAVNDAKS------------------------DRVKDPMPANTSAIGNIQNI 796
Query: 743 ------SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ E+P VGD V+V + TV+K++ SK E+ VQ G MK +K D+
Sbjct: 797 DTSLGMTANDDEDEVPEVGDSVYVPKLKNEATVVKIDSSKNEVQVQAGMMKLKLKLKDV 855
>gi|110289380|gb|AAP54555.2| MutS domain V family protein, expressed [Oryza sativa Japonica
Group]
Length = 653
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/607 (53%), Positives = 437/607 (71%), Gaps = 33/607 (5%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGS 111
SLR+LEW K+C +V+SFA T+ GRE T TQLW + +Y+ S RLL+ET AA+ +
Sbjct: 48 SLRLLEWGKVCDAVASFAGTAHGRETTKTQLWEVEDVSYEQSRRLLEETGAAVRLIDSAG 107
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQL-------SLRAAIK 164
+D +G+D +V+SAI V + ++ EA+A+V+L+ F E+LQ+ SL +I+
Sbjct: 108 GGIDFSGLDTVMVESAIHGVSGGAVIKGQEAMAIVSLMLFVESLQILDADINKSLVKSIQ 167
Query: 165 EDADLYIRFMPLTQML----YQLMDMLIRNENNES----LFLEVSSIHGRLCIRTGADQL 216
+ +L R+ Q+L YQLMD L+RN +NE+ LF EV ++GR CI+ D+
Sbjct: 168 DSPELR-RYREQVQVLESRLYQLMDKLVRNADNEASVSVLFHEVCIVNGRCCIKVTGDKS 226
Query: 217 S-FKGLLLSS-SGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S F GLLLSS + GS++EP+ AVPLNDELQQARA V KAE D L +T+K+ ++LD I
Sbjct: 227 SPFDGLLLSSGTDAGSMVEPIVAVPLNDELQQARALVAKAELDALSKMTDKILLELDNIR 286
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEP--VTSKVSS---SEREW 329
+L ++LD V ARA YS+++ GT P+++LP + +++ S +SS S++ W
Sbjct: 287 ILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSISTISSAHLSKKAW 346
Query: 330 TIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQ 389
+ +P AYHPLLLQQH++ +A KD+ SA E+RRR++YG + + + ++L +++
Sbjct: 347 KLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQLASDLDLMKIR 406
Query: 390 VSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAK 449
VS +E PVP+D FIA T VLVITGPNTGGKTI LKTVGLA +MAK GL+IL+SE K
Sbjct: 407 VSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPVK 466
Query: 450 VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTA 509
+PWF++V+ADIGDEQSL+QSLSTFSGHLKQIG I + STSQSLVLLDE+GAGTNPLEG A
Sbjct: 467 IPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVGAGTNPLEGAA 526
Query: 510 LGMSLLEAFAESGSLLTIATTHHGELKTLKY---------SNDFFENACMEFDEVKLKPT 560
LGMSLLE+FAE+GS LT+ATTHHGELKTLKY SND FENACMEFDE LKPT
Sbjct: 527 LGMSLLESFAEAGSFLTLATTHHGELKTLKYRAHYIVHTFSNDLFENACMEFDEDNLKPT 586
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
++ILWG+PGRS+AINIAERLGLP +++++RQL G A AEIN +I++ME FK Q+ H+
Sbjct: 587 FRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQYQHHLQ 646
Query: 621 EARHFLM 627
EA++++M
Sbjct: 647 EAQYYVM 653
>gi|293336740|ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea mays]
gi|223948449|gb|ACN28308.1| unknown [Zea mays]
Length = 689
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/645 (50%), Positives = 442/645 (68%), Gaps = 67/645 (10%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCS 113
R+LEW K+C +V+SFA T+ GR+AT QLW + +Y+ S LL ET AA+ + + +
Sbjct: 50 RLLEWGKVCDAVASFAGTAHGRDATTKQLWEVEDVSYEQSQMLLQETEAAVLLLDNAGGA 109
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+D +G+D ++SAI V + ++ EA+AV +L+ F E+LQ++++AA+K D R
Sbjct: 110 MDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSLMMFVESLQVNIKAAMKLDEGSCSRL 169
Query: 174 MPLTQM---------------------------------------------LYQLMDMLI 188
LT+ LYQLMD L+
Sbjct: 170 TTLTETILDAVINKSLVKSIQDIVDDDGSVKDTASPELRRYREQVQRLENRLYQLMDKLM 229
Query: 189 RNENNESLFLEVSSIHGRLCIRTGADQLSF-KGLLLSSSGIGSVIEPLSAVPLNDELQQA 247
RN ++E+ EV ++GR CIRT D SF GLLLS S GS+IEP+ AVPLNDELQ++
Sbjct: 230 RNADDEASLSEVCIVNGRCCIRTTMDNSSFFDGLLLSRSDAGSMIEPIVAVPLNDELQES 289
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
RA V KAE DVL LT+K+++DLD I+ +L I+LD + ARA YS+++ GT P+++LP
Sbjct: 290 RALVAKAELDVLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLP- 348
Query: 308 DMKRSLTHEPVTS-------KVSSSE---REWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
+ +E VTS ++SS++ + W +Y+P AYHPLLLQ+H++ +A +D+
Sbjct: 349 ----NFENETVTSATGGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDVA 404
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
SA E+RRR++YG + A + + ++L +++VS LE PVP+D IA +T VLVITGP
Sbjct: 405 SATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITGP 464
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKTI LKTVGLA +MAK GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSGHL
Sbjct: 465 NTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHL 524
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
KQIG I ++STS+SLVLLDE+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGELKT
Sbjct: 525 KQIGAIRAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKT 584
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKYSN+ FENACMEFDE LKPT+KILWG+PGRS+AINI ERLGLP +V+++R+L G A
Sbjct: 585 LKYSNNSFENACMEFDEENLKPTFKILWGIPGRSNAINITERLGLPLDIVESSRRLLGTA 644
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFL-----MLSRNLHKNLL 637
AEIN +I++MER K ++ +H+ EA++ L + + N HK L
Sbjct: 645 GAEINALIMDMERLKQEYQQHLQEAQYLLIPRSFITTWNWHKRAL 689
>gi|255557148|ref|XP_002519605.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
gi|223541195|gb|EEF42750.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
Length = 491
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/456 (63%), Positives = 354/456 (77%), Gaps = 28/456 (6%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S SG GS++EPL+AVPLNDELQ+AR SV KAE DVLL LTEK
Sbjct: 8 SDSGAGSILEPLTAVPLNDELQRARESVAKAEADVLLMLTEK------------------ 49
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV----SSSEREWTIYLPKAYHP 339
+NARATYSLSFGG P+++LP+DM T E + + ER+W +Y+ KAYHP
Sbjct: 50 --INARATYSLSFGGACPDLYLPEDMDGLFTAEASEMRALKGSNPLERKWILYMRKAYHP 107
Query: 340 LLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV 399
LLLQQH+Q Q+A KD + A ++ KL G N +GE D + S SE++VSALE AHPV
Sbjct: 108 LLLQQHRQNLQKAQKDAKKATSQ----KLQGDNGMSRGETDLDSSSSEIKVSALEQAHPV 163
Query: 400 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFAD 459
P+D IA+ +RVLVITGPNTGGKTICLKTVGLA MMAKSGL++L SE ++PWFD + AD
Sbjct: 164 PVDFLIAQNSRVLVITGPNTGGKTICLKTVGLAAMMAKSGLYVLCSESVQLPWFDYILAD 223
Query: 460 IGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA 519
IGDEQSLSQSLSTFSGHLKQI +I SQST++SLVLLDE+GAGTNPLEG ALGMSLLE+FA
Sbjct: 224 IGDEQSLSQSLSTFSGHLKQISDIRSQSTNRSLVLLDEVGAGTNPLEGAALGMSLLESFA 283
Query: 520 ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAER 579
E G+LLTIATTHH ELK+LKYSN FENACMEFDEV LKPTYKI+WGVPGRS+AINI+E+
Sbjct: 284 EDGALLTIATTHHSELKSLKYSNSAFENACMEFDEVNLKPTYKIIWGVPGRSNAINISEK 343
Query: 580 LGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRT 639
LGLP V+ AR+LYGAASAEINEVII+MERFK + E ++EA+H + LS++LH+ LL
Sbjct: 344 LGLPDRVINIARELYGAASAEINEVIIDMERFKQEVQELLYEAQHQIRLSKDLHEALLLA 403
Query: 640 RRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
RRKI+EH +SQR++ +Q+I + AA+ARSL+HK +Q
Sbjct: 404 RRKIMEHGSSQRYKMMQEIYEIAAMARSLLHKKVRQ 439
>gi|357490381|ref|XP_003615478.1| MutS2 protein [Medicago truncatula]
gi|355516813|gb|AES98436.1| MutS2 protein [Medicago truncatula]
Length = 574
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/573 (55%), Positives = 384/573 (67%), Gaps = 102/573 (17%)
Query: 51 YESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHG 110
++SLRVLEWDKL VSSFA TSLGR A QLWS NQTY++SL+LL+ETNAA+EM KHG
Sbjct: 46 HDSLRVLEWDKLSDLVSSFATTSLGRHALKDQLWSQNQTYEESLKLLEETNAAVEMHKHG 105
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SC L +D LV++AI+ RR + EA AV++LLQ ++TLQ L+A IK+D D Y
Sbjct: 106 SCRLHFGHIDAMLVQTAIQSARRTILVTGYEANAVLSLLQSADTLQGDLKATIKQDKDWY 165
Query: 171 IRFMPLTQMLY---------------------------------------------QLMD 185
RFMPLT+++ QLM+
Sbjct: 166 SRFMPLTEVIMDLVINRSLVKEIEQVIDEDGSIKDSASSELRKSRQQVQVLERKVQQLME 225
Query: 186 MLIRNENNESLFLEVSSIHGRLCIRTGADQ-LSFKGLLLSSSGIGS-VIEPLSAVPLNDE 243
LIR+E +E+ LEV++I GR CIRT + Q SFKGLLLSSS IEPLSAVPLNDE
Sbjct: 226 SLIRSERSETSILEVNNIDGRWCIRTDSGQKTSFKGLLLSSSSGVGSTIEPLSAVPLNDE 285
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
LQ+AR+ V KAE DVLLALT K+Q+D+D+IEK+L+ ++QLDV+NARATY LSFGG++PNI
Sbjct: 286 LQRARSLVAKAEADVLLALTRKIQLDVDDIEKILDSLVQLDVINARATYGLSFGGSNPNI 345
Query: 304 FLPQDMKRSLTHEPVTSKVS-----SSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 358
FLP D S T E +T + REW +YLPKAYHPLLLQ H+
Sbjct: 346 FLP-DRNNSSTAESLTRNDTLNGPLPDNREWILYLPKAYHPLLLQSHR------------ 392
Query: 359 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHP--VPIDIFIARKTRVLVITG 416
AN +K ++D N+ VSAL+ A P VP+D ++ KTRV+VITG
Sbjct: 393 ANL-------------KKVKEDVNI------VSALDKAQPQPVPVDFLVSNKTRVIVITG 433
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKTICLKTVGLA MMAKSGL++L+SE ++PWFDSVFADIGDEQSLSQSLSTFSGH
Sbjct: 434 PNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSVFADIGDEQSLSQSLSTFSGH 493
Query: 477 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
LKQI +GAGTNPLEG ALGMSLLE+ A G LLTIATTHHGELK
Sbjct: 494 LKQIS----------------VGAGTNPLEGAALGMSLLESLAHGGCLLTIATTHHGELK 537
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPG 569
TLKYSN+ FENACMEFDEV LKPTYK+LWG+PG
Sbjct: 538 TLKYSNEAFENACMEFDEVNLKPTYKVLWGIPG 570
>gi|297610758|ref|NP_001065027.2| Os10g0509000 [Oryza sativa Japonica Group]
gi|255679545|dbj|BAF26941.2| Os10g0509000 [Oryza sativa Japonica Group]
Length = 528
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/540 (50%), Positives = 371/540 (68%), Gaps = 26/540 (4%)
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEP--VT 319
+T+K+ ++LD I +L ++LD V ARA YS+++ GT P+++LP + +++
Sbjct: 1 MTDKILLELDNIRILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSI 60
Query: 320 SKVSS---SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARK 376
S +SS S++ W + +P AYHPLLLQQH++ +A KD+ SA E+RRR++YG + +
Sbjct: 61 STISSAHLSKKAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEE 120
Query: 377 GEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMA 436
+ ++L +++VS +E PVP+D FIA T VLVITGPNTGGKTI LKTVGLA +MA
Sbjct: 121 DQLASDLDLMKIRVSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMA 180
Query: 437 KSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLD 496
K GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSGHLKQIG I + STSQSLVLLD
Sbjct: 181 KIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLD 240
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
E+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGELKTLKYSND FENACMEFDE
Sbjct: 241 EVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDLFENACMEFDEDN 300
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFL 616
LKPT++ILWG+PGRS+AINIAERLGLP +++++RQL G A AEIN +I++ME FK Q+
Sbjct: 301 LKPTFRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQYQ 360
Query: 617 EHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQL 676
H+ EA++++M S+ LH NL ++ I++H ++QR RK + IS+ A +ARS++ K QQ
Sbjct: 361 HHLQEAQYYVMQSKELHNNLEVAQKNIIDHTSAQRKRKARVISEYAVMARSIIRKKFQQF 420
Query: 677 CPSASQARSLVHKRA-QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
SA R L ++A Q +P + T + +N T + E
Sbjct: 421 RESAIAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTNISMATTTEGEDNG----- 475
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P VGDLV+V + TV+K++ SK E+ VQ G MK +KF D+
Sbjct: 476 ---------------IPEVGDLVYVPKLKNEATVVKIDSSKNEVQVQAGIMKLKLKFKDV 520
>gi|413933874|gb|AFW68425.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
gi|413933875|gb|AFW68426.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
Length = 587
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/545 (49%), Positives = 367/545 (67%), Gaps = 65/545 (11%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ-TYQDSLRLLDETNAAIEMQKHGSCS 113
R+LEW K+C +V+SFA T+ GR+AT QLW + +Y+ S LL ET AA+ + + +
Sbjct: 50 RLLEWGKVCDAVASFAGTAHGRDATTKQLWEVEDVSYEQSQMLLQETEAAVLLLDNAGGA 109
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+D +G+D ++SAI V + ++ EA+AV +L+ F E+LQ++++AA+K D R
Sbjct: 110 MDFSGLDT--IESAIHSVSGGAVIKGLEAMAVTSLMMFVESLQVNIKAAMKLDEGSCSRL 167
Query: 174 MPLTQM---------------------------------------------LYQLMDMLI 188
LT+ LYQLMD L+
Sbjct: 168 TTLTETILDAVINKSLVKSIQDIVDDDGSVKDTASPELRRYREQVQRLENRLYQLMDKLM 227
Query: 189 RNENNESLFLEVSSIHGRLCIRTGADQLSF-KGLLLSS-SGIGSVIEPLSAVPLNDELQQ 246
RN ++E+ EV ++GR CIRT D SF GLLLSS S GS+IEP+ AVPLNDELQ+
Sbjct: 228 RNADDEASLSEVCIVNGRCCIRTTMDNSSFFDGLLLSSRSDAGSMIEPIVAVPLNDELQE 287
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+RA V KAE DVL LT+K+++DLD I+ +L I+LD + ARA YS+++ GT P+++LP
Sbjct: 288 SRALVAKAELDVLSKLTDKIRLDLDSIQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLP 347
Query: 307 QDMKRSLTHEPVTS-------KVSSSE---REWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
+ +E VTS ++SS++ + W +Y+P AYHPLLLQ+H++ +A +D+
Sbjct: 348 -----NFENETVTSATGGSIKQISSAQLPKKAWKLYMPNAYHPLLLQRHQENIHRAKRDV 402
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
SA E+RRR++YG + A + + ++L +++VS LE PVP+D IA +T VLVITG
Sbjct: 403 ASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQLEKDQPVPVDFMIAEETTVLVITG 462
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKTI LKTVGLA +MAK GL+IL+SE K+PWF++V+ADIGDEQSL+QSLSTFSGH
Sbjct: 463 PNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGH 522
Query: 477 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
LKQIG I ++STS+SLVLLDE+GAGTNPLEG ALGMSLLE+FAE+GS LT+ATTHHGELK
Sbjct: 523 LKQIGAIRAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELK 582
Query: 537 TLKYS 541
TLKYS
Sbjct: 583 TLKYS 587
>gi|449515676|ref|XP_004164874.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 666
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/512 (51%), Positives = 346/512 (67%), Gaps = 58/512 (11%)
Query: 26 KNRRGRL-FCSTVAVSDSDDKKSR-----VVYESLRVLEWDKLCHSVSSFARTSLGREAT 79
+NR L F + +S S+D + + +SLR LEWDKLC SV+SFARTSLGR+A
Sbjct: 28 RNRTASLHFSLSANISVSNDIRDNTTQHSIRLDSLRALEWDKLCDSVASFARTSLGRQAI 87
Query: 80 LTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRP 139
QLWS N TY++SLRLLDETNAA+EM KHG CSLDL+GV+L LVKSAI +R+ +
Sbjct: 88 KAQLWSSNWTYEESLRLLDETNAAVEMHKHGGCSLDLSGVNLHLVKSAIEHAQRSLAMDG 147
Query: 140 NEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQM-------------------- 179
NEA+A+ ALLQF++ LQ +L+ AIKED D RFMPLT +
Sbjct: 148 NEAIAIAALLQFADMLQFNLKTAIKEDVDWSTRFMPLTNVIMGMVVNQSLIKLILNAVDE 207
Query: 180 -------------------------LYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGAD 214
L QLMD L+R+ + + FLEV + GR CI++ D
Sbjct: 208 DGSVKDSASYALRESRDQVRKLEKKLSQLMDSLVRSAKSGTSFLEVEIVDGRWCIKSEGD 267
Query: 215 QL-SFKGLLLSS-SGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE 272
QL KGLLLSS +GIGS IEP+SAVPLNDELQQARASV KAEEDVL LTEK+++D ++
Sbjct: 268 QLMDVKGLLLSSDAGIGSFIEPISAVPLNDELQQARASVAKAEEDVLFVLTEKVKMDFED 327
Query: 273 IEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSS----ERE 328
I K++ II+LDVVNARA+Y LSFGGT PN+ L + S+ + ++ S + + E
Sbjct: 328 ISKLIGCIIELDVVNARASYGLSFGGTCPNLVLLEGCNSSIANVCLSGDQSEASHLKKNE 387
Query: 329 WTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEM 388
W +YL +HPLLLQQ+++ + A +D+++A E+ R K GGN + K ++ ++S +M
Sbjct: 388 WVLYLQNTHHPLLLQQYRENLKNAKRDVKNAFNEMGR-KPPGGNMSWKEKEVIDISLFKM 446
Query: 389 QVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYA 448
+V LE A PV +D I+R+ +VLVITGPNTGGKT+CLKT+GLA MMAKSGLH+L+SE
Sbjct: 447 KVDQLEQARPVSVDFSISRRIKVLVITGPNTGGKTVCLKTIGLAAMMAKSGLHVLASESV 506
Query: 449 KVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 480
++PWFDS+FADIGDEQSL+QSLSTFSGHL++I
Sbjct: 507 QIPWFDSIFADIGDEQSLTQSLSTFSGHLRKI 538
>gi|302802119|ref|XP_002982815.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
gi|300149405|gb|EFJ16060.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
Length = 691
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/669 (40%), Positives = 392/669 (58%), Gaps = 63/669 (9%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L VLEW +L +VSSFA T+LGRE Q+ + T S LL ET+ A+E +
Sbjct: 33 ETLEVLEWKRLSSAVSSFASTALGRERL--QVLELPSTESASEMLLSETHGALEFEALRG 90
Query: 112 CSLDLTGVDLSLVKSAI------------------------REVRRAS------------ 135
S DL + +VK + R +R A+
Sbjct: 91 NSCDLGAIQTDVVKVGLTRASKGVALSGKEAAALAAMLEAARSLRHAAFSSFQENKEKQE 150
Query: 136 PLRP--NEALAVVALLQFSETLQLSLR--AAIKEDADLYIRFMPLTQM-----LYQLMDM 186
LRP + ++ A + ++T+ ++ ++K+ A +R + Q L +LM
Sbjct: 151 ILRPIYDMLCSIDADVDTTKTIWNAVNDDGSVKDSASPELRTARMEQASCERKLQELMTR 210
Query: 187 LIRNENNESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSS--GIGSVIEPLSAVPLNDE 243
++ + +V+S+ GRLC+ + S GLLL SS G+ S +EP +AV LN+
Sbjct: 211 IVIDRLAGDPNGQVASLDGRLCVAVSTENNSKVPGLLLQSSAGGLVSYVEPSAAVALNNS 270
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L QARA +AE VL LT K++ L L+ + DVV AR YS S G T P+
Sbjct: 271 LSQARADAAQAEYRVLDDLTTKLRPFLSNFSFTLDIVADFDVVLARGRYSSSIGATRPS- 329
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 363
F+ + S S+ E+ + L A HPLLL+QH+ + A L + L
Sbjct: 330 FVHAERDES----------ESTLDEFLVLLEGARHPLLLEQHRGNLRDAKAKLNTKRKIL 379
Query: 364 RRRKLYGGNAARKGEK-DTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
R K +A+ + + ++ +E +V+ LE + PVPID I R+T+V+ ITGPNTGGK
Sbjct: 380 NRMKSRAFTSAQDYQAAEEAITKAEEEVAELEASVPVPIDFLIKRETKVVTITGPNTGGK 439
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T +KT+GLAV+MA++GL++L+ E A +PW D V ADIGD+QSLSQSLSTFSGHL +I
Sbjct: 440 TAAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIGDQQSLSQSLSTFSGHLLRIKR 499
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I +STS SLVLLDE+G GT+ +EG ALGM++LE+FA +GSLLT+ATTHHGELK LKYS+
Sbjct: 500 IKEESTSSSLVLLDEVGTGTDFVEGAALGMAMLESFA-AGSLLTLATTHHGELKMLKYSD 558
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
D FENA +EFDE KLKPTY++LWG+PGRS+A+NIA RLGLP ++ AR L+GAA+AE+N
Sbjct: 559 DRFENASVEFDEEKLKPTYRLLWGIPGRSNALNIAARLGLPEEIIMEARSLHGAANAELN 618
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
EVI+ +E+ + +F + +++ L +R ++ L +++I E+ + +++ A
Sbjct: 619 EVIMTLEQARQKFEHDLSKSQKLLGETRRHYRALSIAQKEIEEYRKTAALDANDQLAVAE 678
Query: 663 AIARSLVHK 671
A ARS ++K
Sbjct: 679 AAARSDLNK 687
>gi|168049630|ref|XP_001777265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671367|gb|EDQ57920.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 916
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 258/401 (64%), Gaps = 37/401 (9%)
Query: 398 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 457
PVPID+ + +T+V+ ITGPNTGGKT +KTVGLA +MAKSGL +L E +PWFD+V
Sbjct: 542 PVPIDVRVVGETKVVAITGPNTGGKTATIKTVGLAALMAKSGLFVLGIEPVVLPWFDAVL 601
Query: 458 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 517
ADIGDEQSLSQSLSTFSGHL++I I ST SLVLLDE+GAGT+P EG ALGM+LLE+
Sbjct: 602 ADIGDEQSLSQSLSTFSGHLRRIKRIKEVSTGSSLVLLDEVGAGTDPTEGAALGMALLES 661
Query: 518 FAESG---SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
FA+SG S LT+ATTHHGELKTLKYS+ FENA +EF E KL+PTYK+LWG+PGRS+AI
Sbjct: 662 FAQSGKGGSYLTMATTHHGELKTLKYSDSRFENASVEFSEEKLRPTYKLLWGIPGRSNAI 721
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
NIAERLG+P ++ AR LYG SA+++EVI+E+E K F + + A + S+ L +
Sbjct: 722 NIAERLGVPKDILDEARTLYGVVSAQLSEVIMELELAKRDFDQDIATADSQITDSKMLLQ 781
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L+ +K+ E+ Q VQ+ AA +A ARS +H A+ +
Sbjct: 782 QLVAVSKKLQEN---QHMLDVQRADRVAA---------------AAGAARSQLHAIARDV 823
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ S L +N +N + T V + AT S Q+P+ +P+V
Sbjct: 824 KSSTKVPLKVPPSFQN-----TNTEVTQVKQNMKVATNS--------QAPK---GAVPSV 867
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD+V+V G+ V++V+ SK+E+ VQ G M+ +K +I
Sbjct: 868 GDMVYVPKLGRNAKVVEVKTSKKEVTVQSGAMQVKVKLKEI 908
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 166/359 (46%), Gaps = 63/359 (17%)
Query: 44 DKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA 103
D++ E+L +LEW ++C +V+SFA T+L +E Q+ I T + S LL+ T+A
Sbjct: 116 DEEKSAAMETLELLEWPRVCRAVASFAATTLAKEQL--QVLEIPATREASEALLELTSAG 173
Query: 104 IEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAI 163
+E +L + +VK I +R+ + EALAV LLQ S ++ +
Sbjct: 174 VEFISLLGGPFELGVLRTQVVKDCILRIRKGMVVSGVEALAVAMLLQTSGNVRRQVSNTA 233
Query: 164 KEDADLYIRFMPLTQM------------------------------------------LY 181
+E D P+ M L
Sbjct: 234 QEFQDRQSVLEPIVDMVGPLKYFRGHAATIIDEDGTVKDSASPELRKARIQERSVEQRLR 293
Query: 182 QLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLS-FKGLLL-SSSGIGSVIEPLSAVP 239
+L + + R++ EV + GR+C+ +D S GLLL S SG S IEP AVP
Sbjct: 294 ELFNKISRDKGANIQSEEVVLVDGRMCLVVASDNRSNVPGLLLRSGSGATSYIEPAGAVP 353
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
LN++L +ARA V KAE +VL LT++++ LD+I+ LN I++LDV+ ARA YS G T
Sbjct: 354 LNNKLSEARAEVAKAEYNVLSRLTDQLRPYLDDIQFCLNIIVRLDVIMARARYSTWLGAT 413
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 358
P + S+ + L +A HPLL+Q+H++ + A L+S
Sbjct: 414 KPTFI-----------------DTESQSLVRLQLRRARHPLLVQRHREALRDAKAALKS 455
>gi|434396858|ref|YP_007130862.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
gi|428267955|gb|AFZ33896.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
Length = 799
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 250/788 (31%), Positives = 381/788 (48%), Gaps = 150/788 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A + + T +SL+LL +T +++
Sbjct: 5 ETLELLEWHRLCQHLSTFAATKLGTVAA--RGLQLPTTKTESLQLLAQTKEVYSLEQQLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLR----PNEALAV 145
S G+ DL+ + +R +RR + P V
Sbjct: 63 SSWSFKGIEDIGESLERAKIGGLLSAQELLDLATTLAGVRRLRRTIDAKTEDLPTLTQLV 122
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
L + E L+ + I + ++ R P L +Y+++ +++ +
Sbjct: 123 TELRTYPE-LEQEIHHCIDDRGEVTDRANPKLAEIRSQIKRLRDKIYKILQNIVQKQGGA 181
Query: 195 SLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASV 251
++ GR I A Q S G++ +SS+G +EP + V L ++L+QA
Sbjct: 182 VQEAVITQRDGRFVIPVKAPQKDSIPGIVHDISSTGSTLYVEPNAVVQLGNQLRQAERQE 241
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
+ EE VL ALTEK+ +++E++L LD+ ARA YS G P
Sbjct: 242 KREEEAVLRALTEKVAAVQEDLEQLLAIATVLDLATARARYSWWLGANPPRFV------- 294
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKLY 369
V+ E T+ L + HPLL+ QQH+Q T+
Sbjct: 295 ---------DVNQGE---TVTLRQLRHPLLVWQQQHEQGTE------------------- 323
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VPID+ I + RV+ ITGPNTGGKT+ LKT+
Sbjct: 324 ----------------------------VVPIDVQIQPQIRVVAITGPNTGGKTVTLKTI 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GLA +MAK+GL I + E ++PWF+ V ADIGDEQSL QSLSTFSGH+++I II S+
Sbjct: 356 GLAALMAKAGLFIPAKEPVEIPWFEQVLADIGDEQSLQQSLSTFSGHIRRISRIIETSSL 415
Query: 490 Q-SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENA 548
Q SL+L DEIGAGT+P EG+AL +++L+ AE +LLTIATTH+GELK LKY ++ FENA
Sbjct: 416 QDSLILFDEIGAGTDPAEGSALAIAILKYLAEK-ALLTIATTHYGELKALKYQDERFENA 474
Query: 549 CMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AASAEINEVIIE 607
+EF++ LKPTY++LWG+PGRS+A+ IA RLGL ++++A+Q G +AS E+N VI
Sbjct: 475 SVEFNDQTLKPTYRLLWGIPGRSNALTIAHRLGLKSEIIEDAQQRVGVSASQELNLVISA 534
Query: 608 MERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARS 667
+E + + EA L + + + + E R R++ KIS
Sbjct: 535 LEAERREQENKAKEATKLLEQTERFYTEVSAKASSLQE-----REREL-KISQ------- 581
Query: 668 LVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVE 727
K+ QQ +A + V +R QQ +A ++ T+ E
Sbjct: 582 --EKAVQQAILAAKGEIAQVIRRLQQGEQTAQKAQKATE--------------------E 619
Query: 728 HPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
A + K KQ R K P VG+ + + S G+ G V+ ++ ++++ V+ G MK
Sbjct: 620 LNQIAERELAK-TKQPKRTKPGYKPKVGERIKIPSLGQTGEVLSIDEEEKQLTVRFGLMK 678
Query: 788 WIMKFTDI 795
+ +I
Sbjct: 679 MTVAVDEI 686
>gi|51849614|dbj|BAD42336.1| DNA mismatch repair protein Mut2-like protein [Nannochloris
bacillaris]
Length = 820
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 348/702 (49%), Gaps = 139/702 (19%)
Query: 42 SDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN 101
+ D +L VLEW++LCH V+SFA T+LG+ T + N + RLL ET
Sbjct: 104 TSDHLGAAALSTLHVLEWERLCHHVASFASTTLGQGMCATLYPATNPAICE--RLLAETR 161
Query: 102 AAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRA 161
A ++ + +D G+ AI R L ++V +LL + LQ +++
Sbjct: 162 AVDALESEFASDVDFGGIQTRQAHEAILRASRGGMLTGRRLVSVASLLVGAAKLQKAIQY 221
Query: 162 AIKEDADL--------------YIRFMPLTQMLYQLMDMLIRNENN-------------- 193
K DA+ R + L + I+++ +
Sbjct: 222 TAK-DAEFTGLGDTSVLSPVLEIFRHVVTHPELSSEIGFAIKDDGHVREAASDEVKKAAG 280
Query: 194 -------------ESLFLEVSSIHGRLCIRTGAD-QLSFKGLLLSSSGIGS--VIEPLSA 237
+ L E++ GR+C A +G+LL S G+ +EP +A
Sbjct: 281 KVRTIEGRIRGILKGLGGEITEYGGRMCCSIAASIDGPPRGILLGSGPGGTSWYVEPAAA 340
Query: 238 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSF 296
VPLN+EL A+ +T AEE VL LT K+ DL+ ++E L+ ++ LD V ARA Y
Sbjct: 341 VPLNNELTGAKGELTTAEEAVLWKLTGKVG-DLEADLEHALHAVVWLDSVAARARYGRWI 399
Query: 297 GGTSPNIF-LPQDMK------------RSLTHEPVTSKVSSSER------------EWTI 331
GGT P + P+ K + + + K+S+ ++ +
Sbjct: 400 GGTLPRLIPFPKTGKARGGSAKRKKQQQQQQEQEESLKISTGNEEGDEEEEDVEPSKYIV 459
Query: 332 YLPKAYHPLLLQQH-------------------KQKTQQ---AWKDLESANTELRRRKLY 369
YL K HPLLL ++ +KT+Q W+ S+N RK
Sbjct: 460 YLRKLKHPLLLGEYLLARQNGGSSGGRAAGAAAGEKTEQRLPGWRPPSSSN-----RKTS 514
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
G ++ + S E S+ A PVP+DIFI TR ++ITGPNTGGKT +K +
Sbjct: 515 SGISSSSDSDEDQDSLGENSSSSSFSA-PVPVDIFIPSSTRAVIITGPNTGGKTASMKAL 573
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GLA + A++GL I ++ A +P FDSV ADIGDEQSL+ SLSTFSGHL++I + S+ST
Sbjct: 574 GLASLAARAGLPIPAAGPALLPCFDSVLADIGDEQSLTASLSTFSGHLRRIEALRSESTG 633
Query: 490 QSLVLLDEIGAGTNPLEGTALGMSLLEAFAE---SGSLLTIATTHHGELKTLKYSNDF-- 544
+SLVLLDE+G GT+P EG ALG++L++ A +G+ LT+ATTHH EL LKYS +
Sbjct: 634 KSLVLLDELGTGTDPTEGAALGIALIKVLARGGVAGAALTMATTHHSELTALKYSEESDV 693
Query: 545 -------------------------------FENACMEFDEVKLKPTYKILWGVPGRSSA 573
FENA +EFDE+KL PTYK+LWGVPGRS+A
Sbjct: 694 KIIAEGSDKNANTSSANKTSPAASAAAAGPKFENASVEFDEIKLAPTYKLLWGVPGRSNA 753
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERF-KTQ 614
+NIAERLGL VV+ AR+ G A+A +N+ I+ +E KTQ
Sbjct: 754 LNIAERLGLDAEVVEAARERLGVAAAAVNDSIVVLEEARKTQ 795
>gi|428770493|ref|YP_007162283.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
gi|428684772|gb|AFZ54239.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
Length = 803
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 243/784 (30%), Positives = 391/784 (49%), Gaps = 144/784 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L++LEW +LC +S+FA T LG A +Q +I T + LL +T + ++ +
Sbjct: 5 ETLKLLEWQRLCQHLSTFASTKLG--AIASQNLTIPSTLAHTRLLLAQTQEVVTLETDIN 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---V 146
C+ G+ +L+ + +R++RR + N+ + + V
Sbjct: 63 CNWSFQGIHDVGDGIERAKMGGMLSGEELLNLATTLAGVRKLRRIIDDK-NDLITLQELV 121
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNES 195
A ++ L+ + I + ++ R P L + Q + +I+ N
Sbjct: 122 ANIRTFPELEQEIHYCIDDRGEITERASPQLAEIRQKIKSLRSKIQQTLQGIIQRYGNAL 181
Query: 196 LFLEVSSIHGRLCIRTGADQLSF-KGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
L ++ R + AD G++ +S GS +EP + V L ++LQ +R
Sbjct: 182 QELVITQRGDRFVLPVKADHSGIITGIVHDTSSTGSTLYVEPKAVVELGNKLQTSRNQEK 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ EE +L AL+EK+ + ++E++L LD+ ARA YSL P
Sbjct: 242 REEEKILRALSEKVAENWQDLEELLAVATTLDLATARARYSLWLDAYPPEF--------- 292
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
V ++ E +I L + HPLL+ Q + +
Sbjct: 293 ---------VDFADGE-SITLRQVRHPLLVWQERHE------------------------ 318
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
E + +PID+ I+ +TRV+ ITGPNTGGKT+ LKT+G+
Sbjct: 319 ---------------------EGSQVIPIDVRISPETRVVAITGPNTGGKTVTLKTIGMV 357
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ-STSQS 491
+MAK GL I + A++PWF++V ADIGDEQSL QSLSTFSGH+++I I+ + + S
Sbjct: 358 ALMAKVGLFIPAKSPARIPWFNNVLADIGDEQSLQQSLSTFSGHIRRIVRILDEIKENNS 417
Query: 492 LVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACME 551
LVLLDE+GAGT+P EGTA+ +S+L+ A S +LLTIATTH+GELK+LKYS+ FENA +E
Sbjct: 418 LVLLDEVGAGTDPNEGTAIAISILKYLA-SNNLLTIATTHYGELKSLKYSDSRFENASVE 476
Query: 552 FDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERF 611
FD+V L+PTY++LWG+PGRS+AI IA+RLGL +V A++L G SA++NE+I +E+
Sbjct: 477 FDDVSLQPTYRLLWGIPGRSNAITIAQRLGLNDDIVAEAKELVGGFSADVNELISALEKQ 536
Query: 612 KTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHK 671
+ + + +A+ L + ++ + K + A +R K ++ + VHK
Sbjct: 537 RKEQEDKHQQAQDLLTKTELFYQQV---EAKAISLQARERDLKKEQEQE--------VHK 585
Query: 672 SAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT 731
L + SQ ++ Q+ P+A ++ H T N + D+ P
Sbjct: 586 L---LLDAKSQINQVIKGLKQKGSPTA----------QDAHQATENLGKIG-DRFLTPI- 630
Query: 732 ASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
Q + K + P VG+ V + S G+ V+ V+ S E+I + G MK ++
Sbjct: 631 ----------QKSKSKSSYKPKVGERVRILSIGQVAEVLGVDDSNEQISARFGLMKMVIP 680
Query: 792 FTDI 795
F+D+
Sbjct: 681 FSDL 684
>gi|302800183|ref|XP_002981849.1| hypothetical protein SELMODRAFT_421325 [Selaginella moellendorffii]
gi|300150291|gb|EFJ16942.1| hypothetical protein SELMODRAFT_421325 [Selaginella moellendorffii]
Length = 643
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 234/668 (35%), Positives = 357/668 (53%), Gaps = 109/668 (16%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L VLEW +L +VSSFA T+LGR+ Q+ + T S LL ET+ A+E +
Sbjct: 33 ETLEVLEWKRLSSAVSSFASTALGRQRL--QVLELPSTESASEMLLSETHGALEFEALRG 90
Query: 112 CSLDLTGVDLSLVKSAI------------------------REVRRAS------------ 135
S DL + +VK + R +R A+
Sbjct: 91 NSCDLGAIQTDVVKVGLTRASKGVALSGREAAALAAMLEAARSLRHAAFSSFQENKEKQE 150
Query: 136 PLRP--NEALAVVALLQFSETLQLSLR--AAIKEDADLYIRFMPLTQM-----LYQLMDM 186
LRP + ++ A + ++T+ ++ ++K+ A +R + Q L +LM
Sbjct: 151 ILRPIYDMLCSIDADVDTTKTIWNAVNDDGSVKDSASPELRTARMEQASCERKLQELMTR 210
Query: 187 LIRNENNESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSS--GIGSVIEPLSAVPLNDE 243
++ + +V+S+ GRLC+ + S GLLL SS G+ S +EP +AV LN+
Sbjct: 211 IVIDRLAGDPNGQVASLDGRLCVAVSTENSSKVPGLLLQSSAGGLVSYVEPSAAVALNNS 270
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L QARA +AE VL LT K++ L L+ + DVV AR YS S G T P+
Sbjct: 271 LSQARADAAQAEYRVLDDLTTKLRPSLSNFSFTLDIVADFDVVLARGRYSSSIGATRPS- 329
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 363
F+ + S S+ E+ + L A HPLLL+QH+ ++A K L +
Sbjct: 330 FVHAERDES----------ESTLDEFLVLLEGARHPLLLEQHRGNLREA-KIL----NRM 374
Query: 364 RRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKT 423
+ R + E+ ++ +E +V+ LE + PVPID I R+T+V+ ITGPNTGGKT
Sbjct: 375 KSRAFTSAQDYQAAEE--AITKAEEEVAELEASAPVPIDFLIKRETKVVTITGPNTGGKT 432
Query: 424 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 483
+KT+GLAV+MA++GL++L+ E A +PW D V ADIGD+QSLSQSLSTFSGHL +I
Sbjct: 433 AAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIGDQQSLSQSLSTFSGHLLRI--- 489
Query: 484 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
++G GT+ +EG ALGM++L+ +D
Sbjct: 490 -------------KVGTGTDFVEGAALGMAMLD-------------------------DD 511
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 603
FENA +EFDE KLKPTY++LWG+PGRS+A+NIA RLGLP ++ AR L+GAA+AE+NE
Sbjct: 512 RFENASVEFDEEKLKPTYRLLWGLPGRSNALNIAARLGLPEEIIMEARSLHGAANAELNE 571
Query: 604 VIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
VI+ +E+ + +F + +++ L ++ ++ L +++I E+ + +++ A A
Sbjct: 572 VIMTLEQARQKFEHDLSKSQKLLGETKRHYRALSIAQKEIEEYRKTAALDANDQLAVAEA 631
Query: 664 IARSLVHK 671
ARS ++K
Sbjct: 632 AARSDLNK 639
>gi|428220318|ref|YP_007104488.1| MutS2 family protein [Synechococcus sp. PCC 7502]
gi|427993658|gb|AFY72353.1| MutS2 family protein [Synechococcus sp. PCC 7502]
Length = 697
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 260/792 (32%), Positives = 381/792 (48%), Gaps = 151/792 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A I Q+Y S LL +T A ++ S
Sbjct: 4 ETLELLEWSRLCRHLSTFAATKLG--AIAASHLVIPQSYDRSQELLTQTKEAYYLETKLS 61
Query: 112 CSLDLTGV-DLS--LVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAA------ 162
L L GV D+S L ++ ++ V L P E A+ L + L+ SL A
Sbjct: 62 GGLSLEGVQDISGALARAEVQGV-----LSPLELFAIATTLAGARNLRRSLDNAENCPAL 116
Query: 163 --------------------IKEDADLYIRFMP-----------LTQMLYQLMDMLIRNE 191
I+E + R + + + + +I+ +
Sbjct: 117 QALVSDVRTYPDLEKEIYHCIEEGGTVLERASEKLGNIRRTSHQVREKIINTLQGIIQRK 176
Query: 192 NNESLFLEVSSIHGRLCIRTGA---DQLSFKGLLLSSSGIG--SVIEPLSAVPLNDELQQ 246
NN ++ R + A DQ+ +G++ +SG G +IEP S V N++L+Q
Sbjct: 177 NNALQENIITQRGDRYVLSVKASHKDQI--QGIVHDASGSGLTLLIEPSSVVAGNNDLRQ 234
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
A + E +L L+ K+ +++ ++L + ++D+ ARA Y+ PN L
Sbjct: 235 LVAREQREIEIILTQLSAKVTAVAEDLSRLLAILTEIDLAIARARYAYWLKANPPN--LS 292
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
+ +SL+ P I L HPLL+ Q +Q ES T
Sbjct: 293 KSQPQSLSQNP-----------QLITLRNLRHPLLVWQEQQ---------ESGRT----- 327
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
VP+DI I+ + +V+VITGPNTGGKT L
Sbjct: 328 -------------------------------VVPVDILISPEIKVVVITGPNTGGKTATL 356
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
KT GLA +MAK+G+ I + E ++PWFD + ADIGDEQSL Q+LSTFSGH+++IG I+
Sbjct: 357 KTFGLAAIMAKAGMFIPAPEPVEIPWFDLILADIGDEQSLQQNLSTFSGHIRRIGRILEL 416
Query: 487 STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
T SLVLLDE+GAGT+P EG+A+ +LLE A + LTIATTH GELKTLKY N FE
Sbjct: 417 ITPASLVLLDEVGAGTDPSEGSAIATALLEHLANHAN-LTIATTHFGELKTLKYQNPQFE 475
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA +EFD+V+L PTYK+LWG+PGRS+A+ IA RLGLP ++ +A+ G S+EIN VI
Sbjct: 476 NASVEFDDVQLAPTYKLLWGIPGRSNALAIARRLGLPEDIISSAQNHVGYGSSEINLVIA 535
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIAR 666
E+E + Q E A L LHK + + + L Q R Q+I AAI
Sbjct: 536 ELETQRRQQTEKTQAATILLAEMEKLHKEI--SDKSQLLRSQYQELRAKQEIEVTAAI-- 591
Query: 667 SLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKV 726
+QA+ + + ++L+ + QS + N + T + K+
Sbjct: 592 --------------NQAKKEIARVIRKLQ-AGDQSPQSAQHADN--------RMTQISKM 628
Query: 727 EHPATAS--SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSK-EEIVVQV 783
P+ + ++ IK +P +GD V + K G V+ + EI V+V
Sbjct: 629 HLPSQQKQPQANLEPIKY--------IPKLGDQVKIIKLNKIGQVLSTGTNNSNEIGVRV 680
Query: 784 GNMKWIMKFTDI 795
G MK +K DI
Sbjct: 681 GGMKMTVKIEDI 692
>gi|428773368|ref|YP_007165156.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
gi|428687647|gb|AFZ47507.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
Length = 822
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 244/811 (30%), Positives = 387/811 (47%), Gaps = 178/811 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+ R+LEW +LCH +S+F+ T LG A + +I +T ++ +LL++T ++ +
Sbjct: 5 ETFRLLEWQRLCHHLSTFSATKLG--AIASSHLTIPKTLSETQKLLEQTKEVYHIETSLN 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRA-SPLRPNEALA--VV 146
+ +G+ +L+ + +R++RR L + L V
Sbjct: 63 PNWSFSGIHDIGDALERAKLGGILKGEELLNLATTLAGVRKLRRVIEDLEDSPTLKELVE 122
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNES 195
+L F E L+ + I + ++ R P L + Q + +I+ N
Sbjct: 123 SLRTFPE-LEQEIHYCIDDRGEITERASPQLGEIRQKIKGLRSKIQQTLQNIIQRNGNAL 181
Query: 196 LFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVT 252
V+ R + A G++ +S GS + EP S + L + LQ +R
Sbjct: 182 QEPVVTQRGDRFVLPVKASHSGQISGIVHDTSTTGSTLYTEPKSIIDLGNRLQTSRGQEK 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ EE +L LTEK+ +E+E++L LD+ A+A YS+ G P Q +
Sbjct: 242 REEEKILRTLTEKVAEVWEELEQLLAIATALDLATAKARYSMWLEGNPPQFVDFQSQE-- 299
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
I L + HPLL+ Q K++
Sbjct: 300 -----------------NITLRQLRHPLLIWQQKKE------------------------ 318
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
E VPID+ I TRV+ ITGPNTGGKT+ LKT+G+
Sbjct: 319 ---------------------ESGAVVPIDVLIKSDTRVVAITGPNTGGKTVTLKTIGIT 357
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS------- 485
+MAK G+ I + + +PWFD V ADIGDEQSL Q+LSTFSGH+++I I+
Sbjct: 358 ALMAKVGIFIPAKDPVLIPWFDQVLADIGDEQSLEQNLSTFSGHIRRIIRIMDALNGSTP 417
Query: 486 --------------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
S SLVLLDE+GAGT+P EG+A+ +++L+ AE +LLTIATTH
Sbjct: 418 IQNPDDDSPTVETQHGLSNSLVLLDEVGAGTDPTEGSAIAIAILKHLAEH-NLLTIATTH 476
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+GELKTLKY++ FENA +EFD+V L+PTY++LWG+PGRS+AI IA+RLGLP V+ +++
Sbjct: 477 YGELKTLKYNDSRFENASVEFDDVSLQPTYRVLWGIPGRSNAIIIAQRLGLPSDVIADSQ 536
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL------LRTRRKILE 645
+L G S ++N++I E+E + + E +A+ L + ++ + L+ R + L+
Sbjct: 537 ELAGGFSQDVNQLIGELENQRREQEEKHKQAQDLLSKTERFYQEVEAKATSLQDRERDLK 596
Query: 646 HCASQRFRKVQK-ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHC 704
SQ+ + VQK + DA + ++ + ++ P+A + AQQ R +
Sbjct: 597 ---SQQEQAVQKMLLDAKSQIAQVIKELQKKGNPTA--------QDAQQARE------NL 639
Query: 705 TKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFG 764
K+G D+ P Q R K + P VG+ V + S G
Sbjct: 640 EKIG---------------DRFLTPI-----------QKSRKKSSYKPKVGERVRILSLG 673
Query: 765 KKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ V+ V+ + E++ + G MK ++ FTDI
Sbjct: 674 QTAEVLDVDETAEQLSARFGMMKMVLPFTDI 704
>gi|428223909|ref|YP_007108006.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
gi|427983810|gb|AFY64954.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
Length = 791
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 253/801 (31%), Positives = 384/801 (47%), Gaps = 173/801 (21%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +++FA T LG A + W + ++S RLL +T ++
Sbjct: 2 IASETLDLLEWPRLCQHLATFASTKLGTVAA--RHWQPAASLEESQRLLAQTEEVYRLES 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
+ L G+ + ++ R L E LA+ L + +LR I + AD
Sbjct: 60 RQTSGLPFDGI--MDIGPSLERAERQGVLSGEELLAIATTLAGAR----NLRRVIDDQAD 113
Query: 169 LYI--------RFMP-LTQMLY-------QLMDMLI-------------RNENNESLF-- 197
+ + R P + Q ++ ++MD R E ++LF
Sbjct: 114 MPVLTELVSELRTYPEIEQSIHFCIDDRGEVMDRASPKLAEIREKQRSQREEVRQTLFRI 173
Query: 198 -------LEVSSI---HGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDEL 244
++ S I R I A + G++ S+SG +EP + V N+ L
Sbjct: 174 MQRQSQAMQESVITQRGDRFVIPVKASHKDAIPGIVHDTSTSGATLYVEPHTVVERNNRL 233
Query: 245 QQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+Q + +AEE V+L LT ++ L +E++L + LD+ ARA YS GG P
Sbjct: 234 RQLQRQ-EQAEEAVILGRLTAEIAEVLPTLERLLAIVTTLDLAAARARYSFWLGGNVPRF 292
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANT 361
++R+ + L HPLL+ QQH+Q
Sbjct: 293 -----VQRTAGE--------------VVTLRSLRHPLLVWQQQHEQ-------------- 319
Query: 362 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 421
G+A VPID+ I + RV+ ITGPNTGG
Sbjct: 320 ---------GSAV------------------------VPIDLMIQPQLRVVAITGPNTGG 346
Query: 422 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 481
KT+ LKT+GLA +MAK+GL++ + E ++PWFD + ADIGDEQSL QSLSTFSGH+++I
Sbjct: 347 KTVTLKTLGLAALMAKAGLYVAAREPVEIPWFDQILADIGDEQSLQQSLSTFSGHIRRIV 406
Query: 482 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
I+ + T SLVLLDE+GAGT+P EG+AL ++LL+ A++ LT+ATTH GELK LKY
Sbjct: 407 RILDRVTPDSLVLLDEVGAGTDPTEGSALAIALLQTLADAAQ-LTVATTHFGELKALKYQ 465
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ-LYGAASAE 600
+D FENA +EFD+V L PTY++LWG+PGRS+A+ IA RLGL VV A+Q + G+AS E
Sbjct: 466 DDRFENASVEFDDVSLSPTYRLLWGIPGRSNALTIARRLGLSDSVVAQAQQRVGGSASEE 525
Query: 601 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLH------KNLLRTRRKILEHCASQRFRK 654
+N+VI +E + + + EA L+ + LH LL+ R + L+ ++ R
Sbjct: 526 VNQVIAGLEAQRRRQEDKATEAAKILVQAEQLHAEVARKAGLLKQREQALQQ---EQERA 582
Query: 655 VQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVL 714
VQ +A A AR + + +QL R + AQQ A+Q+L+
Sbjct: 583 VQ---EAIAQARREIAQVIKQL------QRGPTAQGAQQ----ATQNLNAI--------- 620
Query: 715 TSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEP 774
++ + + +P+ K P VGD V + G+ V+
Sbjct: 621 ------------------ATRQLPSQQAAPKPKPGFQPQVGDRVRIPRLGQTAEVLTAPD 662
Query: 775 SKEEIVVQVGNMKWIMKFTDI 795
E+ V+ G MK + D+
Sbjct: 663 EDGEMTVRFGLMKMTVALEDV 683
>gi|359461621|ref|ZP_09250184.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris sp. CCMEE 5410]
Length = 794
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 252/793 (31%), Positives = 374/793 (47%), Gaps = 158/793 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+V ++L +LEW++LC +S+FA T LG A + I T + S LL +T +++
Sbjct: 2 IVEKTLELLEWERLCQHLSTFAATKLGVAAAIE--LPIPTTVEGSETLLQQTQEVYDLET 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQ---------LSL 159
+L G+ +++A+ +R L E L V L S L+ +SL
Sbjct: 60 QLLTALTFEGI--HDIRAALVRSQRQGILSGEELLQVATTLLGSRNLRRLINRYPELVSL 117
Query: 160 RAAIKEDADLYIRFMPLTQMLYQLMD-------------MLIRNENNESLFLEVSSIHGR 206
+ ADL + L Q + +D M+IR E + +V +I R
Sbjct: 118 NQLV---ADLRT-YPELEQEIRHCIDEQGEVADRASEKLMVIR-ERQRQVRNDVQTILQR 172
Query: 207 LCIRTGA-----------DQL----------SFKGLL--LSSSGIGSVIEPLSAVPLNDE 243
+ R GA D+ + G++ S+SG IEP + V LN+
Sbjct: 173 ILQRKGAALQERLITQRSDRFVVPVKAPQKDAVPGIVHDASTSGATLYIEPKATVELNNR 232
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L+Q E + ALTEK+ ++++ +L + +D+ ARA YS G P
Sbjct: 233 LRQLTRQEQAEAEAIRQALTEKVAEVQEDLDALLQIVTAVDLATARARYSYWLGANRP-- 290
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTE 362
Q + R+ T+ L + HPLL+ QQH ++ +
Sbjct: 291 ---QFVNRAAE---------------TLTLRRLRHPLLVWQQHHEQGPEV---------- 322
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
V ID+ I + RV+ ITGPNTGGK
Sbjct: 323 ------------------------------------VAIDVTIQPEIRVVAITGPNTGGK 346
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKT+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I
Sbjct: 347 TVTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQE 406
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
II+ T QSLVLLDE+GAGT+PLEG+AL ++LL A+ LTIATTH GELK LKY++
Sbjct: 407 IIAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQ-LTIATTHFGELKALKYTD 465
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
FENA +EFD+ L+PTY++LWG+PGRS+A+ IA+RLGL V+ A + ++N
Sbjct: 466 ARFENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVIAQALAQMDGETDDVN 525
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
+VI +E + Q A L + LH+ + + + Q+ R+ Q+
Sbjct: 526 QVIAGLETERRQQETRAQAAAKLLQSTEQLHQQVAKKASDL--KVREQKLRQQQE----- 578
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
K+ Q+ A QA + V + QQ SA + T+ + + + + T
Sbjct: 579 --------KAIQEEIRRAKQAIAQVIRDLQQQPKSAPAAQVATE--RLEKIASQRLPSRT 628
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
K P P VGD V + S G+K VIK+ P+ E+VVQ
Sbjct: 629 KPKAPPPTGFQ------------------PQVGDRVRIPSIGQKADVIKITPTN-ELVVQ 669
Query: 783 VGNMKWIMKFTDI 795
G MK +K T++
Sbjct: 670 FGMMKMTVKPTEV 682
>gi|170079175|ref|YP_001735813.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. PCC 7002]
gi|169886844|gb|ACB00558.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002]
Length = 799
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 242/794 (30%), Positives = 368/794 (46%), Gaps = 166/794 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQ---- 107
E+L++LEW +LC +S+FA T LG A Q Q+ DS LL +T +EMQ
Sbjct: 7 ETLKLLEWQRLCQHLSTFAATKLG--AIAAQHLVFPQSQADSEILLAQT---VEMQALDG 61
Query: 108 ------------------KHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALL 149
+ + + G DL L+ + + VRR L N L + L
Sbjct: 62 AVDNGVSFEGIGDISDALERATVGGLIAGKDLLLIATTLAGVRRLRRLVENAELELSQLT 121
Query: 150 QFSET------LQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNEN 192
+ E L+ + I + D+ R P + +YQ + +++ +
Sbjct: 122 RLVEQVRTYPELEQDIHHCIDDRGDVTDRASPKLEGIRVKIKGAREQIYQTLQRIMQRHS 181
Query: 193 NESLFLEVSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARA 249
++ R + A Q G++ +SS+G IEP V L + L+QA
Sbjct: 182 GSIQEAVITQRGDRFVLPVKAGQKEQIPGIVHDISSTGSTLYIEPKGIVELGNRLRQAVK 241
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
+ E VL LTEK+ ++++EK+L LD+ RA YSL G P P
Sbjct: 242 QEEREIEIVLRQLTEKVAEVVEDLEKLLAIATTLDLAMTRARYSLWLDGHPPKFIAP--- 298
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+P L + HPLL+ Q KQ+
Sbjct: 299 -----DQPT-------------ILRQLRHPLLVWQEKQE--------------------- 319
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
+LE+ +PI++ I + RV+ ITGPNTGGKT+ LKT+
Sbjct: 320 ---------------------ESLEV---IPINVQIRPEIRVVAITGPNTGGKTVTLKTL 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII---SQ 486
G+A +MAK GL I + ++PWFD V ADIGDEQSL QSLSTFSGH++++G II Q
Sbjct: 356 GMAALMAKVGLFIPAIAPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALDQ 415
Query: 487 STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
+ +LVLLDE+GAGT+P EG+AL ++LL+ A+ + LT+ATTH+GELK LKY ++ FE
Sbjct: 416 ESQNNLVLLDEVGAGTDPTEGSALAIALLKYLADQ-TQLTVATTHYGELKALKYEDERFE 474
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA +EFDE L+PTYK+LWG+PGRS+A+ IA+RLGL +V+ A+ L G + +NEVI
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAQRLGLDAEIVETAQDLLGNTNTNVNEVIA 534
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIAR 666
+E +QR + QK +A A+
Sbjct: 535 ALE---------------------------------------AQRREQEQKAKEAEALL- 554
Query: 667 SLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH----CTKVGKNQHVLTSNFQQTT 722
K ++ S + + +R +L+ + Q + K Q + T Q T
Sbjct: 555 ----KQTERFYTEVSSKAADLQRREAELKLAQDQQVQAAIAEAKAEIAQVIRTLQKGQPT 610
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTEL-PNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
K + A + P+ K+ P +G+ + +S G+ VI+++P + +V
Sbjct: 611 AQKAQVATEALGDIAASKMSQPKRKKPGYQPQLGEKIRISKLGQTAEVIELDPDNKTLVA 670
Query: 782 QVGNMKWIMKFTDI 795
+ G MK + +T+I
Sbjct: 671 RFGVMKMSLDWTEI 684
>gi|158336591|ref|YP_001517765.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris marina MBIC11017]
gi|158306832|gb|ABW28449.1| MutS2 family protein [Acaryochloris marina MBIC11017]
Length = 794
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 372/794 (46%), Gaps = 160/794 (20%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+V ++L +LEW++LC +S+FA T LG A + I T + S LL +T +++
Sbjct: 2 IVEKTLELLEWERLCQHLSTFAATKLGVAAAIE--LPIPDTVEASETLLQQTQEVYDLET 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
+L G+ +++A+ +R LR E L V L S +LR I +
Sbjct: 60 QLLTALTFEGI--HDIRAALVRSQRQGILRGEELLQVATTLLGSR----NLRRLINRYPE 113
Query: 169 LY--------IRFMP-LTQMLYQLMD-------------MLIRNENNESLFLEVSSIHGR 206
L +R P L Q + +D M IR E + +V +I R
Sbjct: 114 LTSLNQLVADLRTYPELEQEIRHCIDEQGEVADRASEKLMGIR-ERQRQVRNDVQTILQR 172
Query: 207 LCIRTGA---------------------DQLSFKGLL--LSSSGIGSVIEPLSAVPLNDE 243
+ R GA + + G++ S+SG IEP + V LN+
Sbjct: 173 ILQRKGAALQERLITQRSNRFVVPVKAPQKDAVPGIVHDASTSGATLYIEPKATVELNNR 232
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L+Q E + ALTEK+ ++++ +L + +D+ ARA YS P
Sbjct: 233 LRQLTRQEQAEAEAIRQALTEKVAEVHEDLDALLQIVTLVDLATARARYSYWLEANRPRF 292
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANT 361
+ R+ T+ L + HPLL+ QQH+Q +
Sbjct: 293 -----VNRAAD---------------TLTLRRLRHPLLVWQQQHEQGPE----------- 321
Query: 362 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 421
V ID+ I + RV+ ITGPNTGG
Sbjct: 322 ------------------------------------VVAIDVTIQPQIRVVAITGPNTGG 345
Query: 422 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 481
KT+ LKT+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I
Sbjct: 346 KTVTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQ 405
Query: 482 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
II+ T QSLVLLDE+GAGT+PLEG+AL ++LL A+ LTIATTH GELK LKY+
Sbjct: 406 EIIAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQ-LTIATTHFGELKALKYT 464
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
++ FENA +EFD+ L+PTY++LWG+PGRS+A+ IA+RLGL V+ A+ + ++
Sbjct: 465 DNRFENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVIAQAQAQMDGETDDV 524
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
N+VI +E + Q A L + LH+ + + + Q+ R+ Q+
Sbjct: 525 NQVIAGLETERRQQETKAQAAAQLLQSTEQLHEQVAKKASDL--KVREQKLRQQQE---- 578
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
K+ Q+ A QA + V + QQ SA + V T ++
Sbjct: 579 ---------KAIQEEIRRAKQAIAQVIRDLQQQPKSAPAA----------QVATERLEKI 619
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
++ + K + P VGD V + S G+K VIK+ P+ E+VV
Sbjct: 620 ANQRLPSRTKPKAPPPKGFQ----------PQVGDRVRIPSIGQKADVIKITPTN-ELVV 668
Query: 782 QVGNMKWIMKFTDI 795
+ G MK +K T+I
Sbjct: 669 KFGMMKMTVKPTEI 682
>gi|428215373|ref|YP_007088517.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
gi|428003754|gb|AFY84597.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
Length = 846
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 246/785 (31%), Positives = 371/785 (47%), Gaps = 144/785 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A I T + +L LL +T E++ G
Sbjct: 43 ETLELLEWPRLCQHLATFAGTKLG--AMAAGDLQIPDTLEQTLVLLAQTQEVYELENQGL 100
Query: 112 CSLDLTGV----------DLSLVKSA------------IREVRRASPLRPNEALA---VV 146
+L G+ DL + SA R++RR P ++ V
Sbjct: 101 TTLSFDGIHDIGDSLERADLHGILSAEELLAIATTLSGARQLRRTIDDHPQLSVLNRLVA 160
Query: 147 ALLQFSETLQ-----LSLRAAIKEDA-----DLYIRFMPLTQMLYQLMDMLIRNENNESL 196
L + E Q + RA + + A ++ R + +YQ + +++ +N
Sbjct: 161 DLRTYPEIEQEIHRCIDDRAQVADRASTRLGEIRQRQRTVRDQIYQKLQSILQRHSNAVQ 220
Query: 197 FLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTK 253
++ R I + Q + G++ SS G+ +EP S V LN++ +
Sbjct: 221 EQLITKRSDRFVIPVKSPQKDAIPGIVHDSSMSGATLYVEPHSVVELNNKARVLLREEKA 280
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
EE +L ALT K+ ++++E++L + LD+ ARA YS P
Sbjct: 281 EEEAILRALTAKITEVVEDLERLLAIVTILDLATARARYSYWLNANPPTF---------- 330
Query: 314 THEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKLYGG 371
++ E TI L + HPLL+ QQH+Q G
Sbjct: 331 --------INRGEEGQTITLRQLRHPLLIWQQQHEQ-----------------------G 359
Query: 372 NAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
NA VPID+ + + +V+ ITGPNTGGKT+ LKT+GL
Sbjct: 360 NAV------------------------VPIDLIVQPQIKVVAITGPNTGGKTVTLKTLGL 395
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQS 491
++MAK GL I + ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+ T S
Sbjct: 396 GILMAKVGLFIPAKVPVELPWFDFVLADIGDEQSLEQSLSTFSGHIRRISRILGSCTPDS 455
Query: 492 LVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACME 551
LVLLDE+GAGT+P EG+AL ++LL A+ S LTIATTH+GELK LKY +D FENA +E
Sbjct: 456 LVLLDEVGAGTDPTEGSALAIALLHHLADC-SQLTIATTHYGELKALKYEDDRFENASVE 514
Query: 552 FDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AASAEINEVIIEMER 610
FDE L+PTY++LWG+PGRS+A+ IA RLGL +V A L + +++ VI +E
Sbjct: 515 FDEATLQPTYRLLWGIPGRSNALTIARRLGLTSEIVDQAANLVAPTGTQDVDRVIAGLEN 574
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ Q EA L + L++ + + + E + + Q +++A A+A+ +
Sbjct: 575 QRKQQETKAQEAGQLLGETERLYREVADKAKSLKERERQLQQSQEQAVAEAIAVAKQEIA 634
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ ++L Q ++ + A Q A+Q L G + L S Q KV P
Sbjct: 635 QVIRRL-----QQGNVTGQDANQ----ATQDLQ----GIAEKHLPSRQQ-----KVAKP- 675
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
P + P GD V + G+ G V+ V E+ V+ G MK +
Sbjct: 676 ------------KPGFR----PKAGDRVRIPQIGQTGEVLAVGEGDLEVTVRFGLMKMTI 719
Query: 791 KFTDI 795
T+I
Sbjct: 720 GITEI 724
>gi|186680652|ref|YP_001863848.1| recombination and DNA strand exchange inhibitor protein [Nostoc
punctiforme PCC 73102]
gi|186463104|gb|ACC78905.1| MutS2 family protein [Nostoc punctiforme PCC 73102]
Length = 805
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 252/806 (31%), Positives = 369/806 (45%), Gaps = 176/806 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG AT + I + S +LL++T +++ +
Sbjct: 5 ETLELLEWHRLCQHLATFAATKLG--ATAARNLKIPDSQTQSEQLLEQTKEVYQLESRLT 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L G+ + ++ R+ L +E LA+ L + SLR I DL I
Sbjct: 63 TGLSFEGI--QDIGDSLERAERSGVLAGDELLAIATTLAGAR----SLRRVIDNQEDLPI 116
Query: 172 --------RFMP-LTQMLYQLMDMLIRNENNESLFL-EVSS------------IHGRLCI 209
R P L Q +++ +D + + S L E+ + + L
Sbjct: 117 LTELVADLRTYPELEQEIHRCIDERAQVTDRASQKLGEIRTDLRRLRSQITQKLQNILQA 176
Query: 210 RTGA--DQL------------------SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
++GA +QL + G++ S+SG +EP S VPL ++L+Q
Sbjct: 177 KSGAVQEQLITQRSDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPNSVVPLGNQLRQI 236
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
EE + LTE++ ++E++L LD+ AR+ YS G P Q
Sbjct: 237 IRKEQAEEEAIRRILTEQVAAVKPDLERLLAIATTLDLATARSRYSYWLGANPPRFIQRQ 296
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRR 365
D + TI L HPLL+ QQH+Q
Sbjct: 297 DSE-------------------TITLRNLRHPLLVWQQQHEQ------------------ 319
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTI 424
PV P+D+ I RV+ ITGPNTGGKT+
Sbjct: 320 ------------------------------GQPVVPVDLLINPLIRVVTITGPNTGGKTV 349
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 350 TLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTFSGHIRRISRIL 409
Query: 485 ---------------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
QSLVLLDE+GAGT+P+EG+AL ++LL+ A LTIAT
Sbjct: 410 EALGNGESGSEDGEKEMPNPQSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQ-LTIAT 468
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH GELK LKY ++ FENA +EFDE L PTY++LWG+PGRS+A+ IA RLGL VVQ
Sbjct: 469 THFGELKALKYEDERFENASVEFDESTLSPTYRLLWGIPGRSNALTIALRLGLKPEVVQQ 528
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+ G A+ E+N+VI +E + + EA+ L + L+K + + E +S
Sbjct: 529 AKTQVGEATDEVNQVIAGLEAQRRRQETKAAEAQSLLQQAERLYKEVSAKAASLEERESS 588
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
R Q+I + QQ A + V +R Q+ P+A ++ T
Sbjct: 589 --LRASQEI-------------AVQQAIVQAKGEIAQVIRRLQKGTPTAQEAQQATN-AL 632
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
NQ + ++ PAT + + K +P VGD V + G+ V
Sbjct: 633 NQ-----------IGQLYQPATPA-----------KPKAGFMPKVGDRVRIPKLGQIADV 670
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
I E+ V+ G MK +K D+
Sbjct: 671 IAAPDEDGELSVRFGLMKMTVKLQDV 696
>gi|427708044|ref|YP_007050421.1| MutS2 protein [Nostoc sp. PCC 7107]
gi|427360549|gb|AFY43271.1| MutS2 protein [Nostoc sp. PCC 7107]
Length = 796
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 251/800 (31%), Positives = 383/800 (47%), Gaps = 173/800 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A+ +Q+ S +LL +T +++ +
Sbjct: 5 ETLELLEWHRLCQHLATFAATKLGAIASTNLQIPTSQSV--SEQLLAQTKEVYQLESRLA 62
Query: 112 CSLDLTGV-DL--SLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
L G+ D+ S+ ++ +R + L +E LA+ L + +LR I D
Sbjct: 63 TGLSFDGIQDIGDSIERAELRGI-----LAGDELLAIATTLAGAR----NLRRVIDNQED 113
Query: 169 LYI--------RFMP-------------------LTQMLYQLMDML--IRNENNESL--F 197
+ R P +Q L ++ D L +R++ N+ L
Sbjct: 114 TPVLTDLVADLRTYPELEQEIHRCIDERGIVADRASQKLGEIRDDLRRLRSQINQKLHNI 173
Query: 198 LEVSS--IHGRLCIRTG---------ADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDEL 244
L+ S + +L + G + + + G++ S+SG+ +EP S VP+ ++L
Sbjct: 174 LQAKSNAVQEQLITQRGDRFVIPVKASHKDAIPGIVHDSSTSGVTLYVEPSSIVPMGNQL 233
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
+Q EE V LTE++ ++E++L + LD+ AR+ YS P
Sbjct: 234 RQTLKREQAEEEAVRRILTEQVAAVTPDLERLLAIVTTLDLAAARSRYSYWLKANPPRFI 293
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTE 362
+ E + + L + HPLL+ QQH+Q
Sbjct: 294 -------------------NREEQEIVTLRQLRHPLLIWQQQHEQ--------------- 319
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
G++ +P+D+ I+ +V+ ITGPNTGGK
Sbjct: 320 --------GHSV------------------------IPVDLLISPHIKVVTITGPNTGGK 347
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKT+GLA +MAK GL I + E ++PWFD + ADIGDEQSL QSLSTFSGH+++I
Sbjct: 348 TVTLKTLGLAALMAKVGLFIPAREPVEMPWFDQILADIGDEQSLQQSLSTFSGHIRRISR 407
Query: 483 IIS------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
I++ ++ SLVLLDE+GAGT+P EG+AL ++LL+ AE L TIATTH GELK
Sbjct: 408 ILNALEHEVENQPNSLVLLDEVGAGTDPAEGSALAIALLQHLAEHAQL-TIATTHFGELK 466
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 596
LKY + FENA +EFDE L PTY++LWG+PGRS+A+ IA RLGL VV+NA+ G
Sbjct: 467 ALKYEDARFENASVEFDEATLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKTQVGE 526
Query: 597 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFR-KV 655
AS E+N+VI +E + + EA+ L + L+K ++ + AS R K
Sbjct: 527 ASDEVNQVIAGLEAQRRRQETKAAEAQKLLQQAERLYK-------EVSDKAASLEEREKS 579
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLT 715
++S A+ QQ A + V +R QQ P+A + T NQ +T
Sbjct: 580 LRVSQEVAV---------QQAIAQAKGEIAQVIRRLQQGTPTAQDAQQATN-ALNQ--IT 627
Query: 716 SNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPS 775
+Q PA A+ P+V +P VGD + +S FG+ V+
Sbjct: 628 QKYQ---------PAAAAK---------PKVGF--MPKVGDRIRISQFGQTAEVLTAPDE 667
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
E+ V+ G MK +K DI
Sbjct: 668 DGELNVRFGIMKMTVKLPDI 687
>gi|434407615|ref|YP_007150500.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
gi|428261870|gb|AFZ27820.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
Length = 814
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 245/815 (30%), Positives = 368/815 (45%), Gaps = 185/815 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A + I ++ +S +LL +T +++ +
Sbjct: 5 ETLELLEWPRLCQHLSTFAATKLG--AIAARQLKIPESQAESEQLLAQTKEVYQLESRLT 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L G+ + ++ R+ L +E LA+ L + +LR I DL I
Sbjct: 63 PGLSFEGI--QDIGDSLERAERSGILTGDELLAIATTLAGAR----NLRRVIDNQEDLPI 116
Query: 172 --------RFMP-LTQMLYQLMD--------------------MLIRNENNESLFLEVSS 202
R P L Q +++ +D +R++ + L + +
Sbjct: 117 LNELVADLRTYPELEQEIHRCIDERAQVTDRASQKLGEIRLDLRRLRSQITQKLQNIIQA 176
Query: 203 IHG------------RLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
G R I A Q + G++ S+SG +EP S VP+ ++L+Q
Sbjct: 177 KSGAVQEQLITQRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPHSVVPIGNQLRQV 236
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
EE + ALTE++ ++E++L LD+ A++ YS G P Q
Sbjct: 237 IRKEQTEEEAIRRALTEQVAAVKPDLERLLAIATSLDLATAKSRYSFWIGANPPRFIQRQ 296
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRR 365
D + I L HPLL+ QQH+Q
Sbjct: 297 DQE-------------------IINLRHLRHPLLVWQQQHEQ------------------ 319
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTI 424
PV P+D+FI+ + RV+ ITGPNTGGKT+
Sbjct: 320 ------------------------------GQPVVPVDLFISPQIRVVTITGPNTGGKTV 349
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 350 TLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTFSGHIRRISRIL 409
Query: 485 SQ------------------------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAE 520
++SLVLLDE+GAGT+P+EG+AL ++LL+ A
Sbjct: 410 EALGDNSSVTGNEEDSEQLPITHYPLPITKSLVLLDEVGAGTDPVEGSALAIALLQYLAN 469
Query: 521 SGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERL 580
LTIATTH GELK LKY N+ FENA +EFDE L PTY++LWG+PGRS+A+ IA RL
Sbjct: 470 HAQ-LTIATTHFGELKALKYENERFENASVEFDESTLSPTYRLLWGIPGRSNALTIALRL 528
Query: 581 GLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTR 640
GL V++ A+ G A+ E+N VI +E + + EA+ L + L+K +
Sbjct: 529 GLKPEVIEQAKTQVGEATDEVNLVIAGLEAQRRRQETKAAEAQDLLRQAEILYKEVSAKA 588
Query: 641 RKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQ 700
+ E K ++S A+ QQ SA + V +R QQ P+A +
Sbjct: 589 ADLQER------EKALRVSQEVAV---------QQAIASAKSEIAQVIRRLQQGTPTAQE 633
Query: 701 SLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ T NQ + + PA P+ K +P VGD + +
Sbjct: 634 AQQATN-ALNQ-----------IAQKSQPAP-----------PPKAKIAFMPKVGDRIRI 670
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ V+ E+ V+ G MK +++ D+
Sbjct: 671 PKLGQTAEVLTAPDEDGELTVRFGIMKMMVQLADV 705
>gi|443477184|ref|ZP_21067049.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
gi|443017746|gb|ELS32124.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
Length = 678
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 246/782 (31%), Positives = 373/782 (47%), Gaps = 150/782 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQ-KHG 110
E+L +LEW++LC +S+F T LG A I Y+++L LL +T A ++ ++
Sbjct: 4 ETLDLLEWNRLCQHLSTFTTTKLG--AIAAAHIPIPDRYEETLELLTQTKEAYALEERNA 61
Query: 111 SCSLD-----------------LTGVDLSLVKSAI---REVRRA---SPLRPNEALAVVA 147
SLD L+ ++L + + + R +RR + PN +
Sbjct: 62 GVSLDGIQNITEAVFRAEKQGILSALELWAIATTLAGARNLRRQLDNADYCPNLQILASD 121
Query: 148 LLQFSETLQLSLRAAIKEDADLYIRF--------MPLTQMLYQLMDML--IRNENNESLF 197
L + + Q R I E ++ R LT + Q+M L I N SL
Sbjct: 122 LRTYPDVEQEIYRC-IDEGGNVLDRASERLGEIRHELTSVRDQIMTKLQNIMQRNASSLQ 180
Query: 198 LEV-SSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTK 253
++ + + R + + Q G++ SS+G+ +EP S V N+ L+Q
Sbjct: 181 EQIITQRNDRYVLSVKSPQRDRVPGVIHDTSSTGMTLFVEPNSIVQSNNRLRQLLKMEQA 240
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
E +L L+ K+ ++++++L + ++D+ ARA Y+ GG P+ FL Q+
Sbjct: 241 QIEIILTELSAKITEIAEDLQRLLIIVTKIDLAVARARYAYWLGGNPPH-FLDQE----- 294
Query: 314 THEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNA 373
I L + HPLL+ Q K N E R
Sbjct: 295 ----------------AIVLRQLRHPLLVWQQK-------------NEEGR--------- 316
Query: 374 ARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAV 433
VP+D+ I+ + V+VITGPNTGGKT LKT GLA
Sbjct: 317 -----------------------EVVPVDVLISPQISVVVITGPNTGGKTATLKTFGLAA 353
Query: 434 MMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLV 493
+MAK+G+ I + E ++PWFD V ADIGDEQSL Q+LSTFSGH+++IG I+ + QSLV
Sbjct: 354 LMAKAGMFIPAREPVEMPWFDLVLADIGDEQSLQQNLSTFSGHIRRIGRILEALSPQSLV 413
Query: 494 LLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFD 553
LLDE+GAGT+P EG+A+ +LLE + + L IATTH GELK LKY N FENA +EFD
Sbjct: 414 LLDEVGAGTDPSEGSAIATALLEYLGDH-TRLAIATTHFGELKALKYQNPKFENASVEFD 472
Query: 554 EVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKT 613
+ L PTY++LWG+PGRS+A+ IA RLGLP ++ A+ G SAE+N+VI E+E +
Sbjct: 473 DASLAPTYRLLWGIPGRSNALAIAGRLGLPQDILAAAQVRVGIGSAEMNDVIAELEAQRR 532
Query: 614 QFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSA 673
+ + A H L+ + LHK +L D A + R
Sbjct: 533 EQTQKTEAAAHLLVETERLHKEIL----------------------DRAEMMR------- 563
Query: 674 QQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS 733
SQA+ L ++ +++ + +Q+ +VG+ L Q T V+H
Sbjct: 564 -------SQAKELRERQEKEVNAAIAQA--QKEVGRVIRKLQQGEQAAT--DVQHTERRI 612
Query: 734 SSVVK-DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ K + + P K N+GD V + FGK V+ V + V++G MK +
Sbjct: 613 EELTKRHLPEMPPAKPKLTLNIGDRVRIPKFGKIAQVLTVPNGAGDFSVRLGQMKLSVNL 672
Query: 793 TD 794
+D
Sbjct: 673 SD 674
>gi|75908863|ref|YP_323159.1| recombination and DNA strand exchange inhibitor protein [Anabaena
variabilis ATCC 29413]
gi|75702588|gb|ABA22264.1| MutS 2 protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 240/798 (30%), Positives = 370/798 (46%), Gaps = 167/798 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A+L I + S +LL++T +++ +
Sbjct: 5 ETLELLEWYRLCQHLSTFAATKLGAIASLH--LQIPASQAASEQLLEQTKEVYQLESRLA 62
Query: 112 CSLDLTGV-DL--SLVKSAIREVRRASPLRPNEALAVVALLQFSETL------------- 155
L G+ D+ SL +S ++ + L +E LA+ L + L
Sbjct: 63 SGLSFEGIQDIGDSLERSELQGI-----LAGDELLAIATTLAGARNLRRIIDNQEDIPIL 117
Query: 156 -------------------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRN 190
Q++ RA+ K D+ L + Q + +++
Sbjct: 118 TELVAELRTYPELEQEIHRCIDERGQVTDRASTKL-GDIRTELRKLRSQITQKLQNILQV 176
Query: 191 ENNESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
++N ++ R I A Q + G++ S+SG IEP S VP+ ++L+Q
Sbjct: 177 KSNAVQEQLITQRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYIEPNSVVPMGNQLRQT 236
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
EE + ALTEK+ ++E++L + LD+ ARA YSL P Q
Sbjct: 237 IRKEQAEEEAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQ 296
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRR 365
+ + I L + +HPLL+ QQH+Q
Sbjct: 297 EQE-------------------IITLRQLHHPLLVWQQQHEQ------------------ 319
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTIC 425
G+A +P+D+ I+ RV+ ITGPNTGGKT+
Sbjct: 320 -----GHAV------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKT+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410
Query: 486 --------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
+ QSLVLLDE+GAGT+P EG+AL ++LL+ A+ LT+ATTH GELK
Sbjct: 411 ALGTGDKEEYRPQSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQ-LTVATTHFGELKA 469
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKY + FENA +EFD+ L PTY++LWG+PGRS+A+ IA RLGL VV+ A+ G A
Sbjct: 470 LKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEA 529
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 657
+ E+N VI +E + + EA+ L + L+K + + E Q R Q+
Sbjct: 530 TDEVNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQER--EQSLRASQE 587
Query: 658 ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 717
++ AI +QA+ + K ++L+ + + + N + +
Sbjct: 588 VAVQQAI----------------TQAKGEIAKVIRRLQQGTATAQDAQQATNNLNQIAQK 631
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
+Q K + +P +GD + +S FG+ V+
Sbjct: 632 YQPAPPPKAKPGF--------------------VPKIGDRIRISQFGQTADVLTAPDEDG 671
Query: 778 EIVVQVGNMKWIMKFTDI 795
E+ V+ G MK +K DI
Sbjct: 672 ELTVRFGIMKMTVKLEDI 689
>gi|161353751|ref|NP_484093.2| recombination and DNA strand exchange inhibitor protein [Nostoc sp.
PCC 7120]
Length = 798
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 239/795 (30%), Positives = 363/795 (45%), Gaps = 161/795 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A+L I + S +LL++T +++ +
Sbjct: 5 ETLELLEWYRLCQHLSTFAATKLGAIASLH--LQIPASQAASEQLLEQTKEVYQLESRLA 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETL---------------- 155
L G+ + A+ L +E LA+ L + L
Sbjct: 63 SGLSFEGI--HDIGDALERSELQGILGGDELLAIATTLAGARNLRRIIDNQEDIPILTEL 120
Query: 156 ----------------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN 193
Q++ RA+ K D+ L + Q + +++ ++N
Sbjct: 121 VAELRTYPELEQEIHRCIDERGQVTDRASTKL-GDIRTELRKLRSQITQKLQNILQVKSN 179
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARAS 250
++ R I A Q + G++ S+SG IEP S VP+ ++L+Q
Sbjct: 180 AVQEQLITQRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRK 239
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
EE + ALTEK+ ++E++L + LD+ ARA YSL P Q+ +
Sbjct: 240 EQAEEEAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQE 299
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKL 368
I L + +HPLL+ QQH+Q
Sbjct: 300 -------------------IITLRQLHHPLLVWQQQHEQ--------------------- 319
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
G+A +P+D+ I+ RV+ ITGPNTGGKT+ LKT
Sbjct: 320 --GHAV------------------------IPVDLLISPHIRVVTITGPNTGGKTVTLKT 353
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ-- 486
+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++
Sbjct: 354 LGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILNALG 413
Query: 487 ------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 540
T SLVLLDE+GAGT+P EG+AL ++LL+ A+ L T+ATTH GELK LKY
Sbjct: 414 TGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQL-TVATTHFGELKALKY 472
Query: 541 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 600
+ FENA +EFD+ L PTY++LWG+PGRS+A+ IA RLGL VV+ A+ G A+ E
Sbjct: 473 EDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEATDE 532
Query: 601 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 660
+N VI +E + + EA+ L + L+K + + E Q + Q+I+
Sbjct: 533 VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQER--EQSLKASQEIAV 590
Query: 661 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 720
AI +QA+ + K ++L+ + + + N H + +Q
Sbjct: 591 QQAI----------------TQAKGEIAKVIRRLQQGTATAQDAQQATNNLHQIAQKYQP 634
Query: 721 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 780
K + +P VGD + +S FG+ V+ E+
Sbjct: 635 APPPKAKPGF--------------------VPKVGDRIRISQFGQTADVLTAPDEDGELT 674
Query: 781 VQVGNMKWIMKFTDI 795
V+ G MK +K DI
Sbjct: 675 VRFGIMKMTVKLEDI 689
>gi|166365089|ref|YP_001657362.1| recombination and DNA strand exchange inhibitor protein
[Microcystis aeruginosa NIES-843]
gi|166087462|dbj|BAG02170.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 789
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 237/785 (30%), Positives = 371/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + QL + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLGAMA-IRQL-PLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQA----------GTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425446466|ref|ZP_18826469.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
gi|389733282|emb|CCI02921.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
Length = 789
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 236/785 (30%), Positives = 368/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQ----------SGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P EEI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESEEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425465434|ref|ZP_18844743.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
gi|389832333|emb|CCI24146.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
Length = 789
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 235/785 (29%), Positives = 369/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIKERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQA----------GTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425469689|ref|ZP_18848604.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
gi|389880428|emb|CCI38809.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
Length = 789
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 234/785 (29%), Positives = 368/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S + ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G +PI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------IPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQ----------AGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P EEI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESEEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425456967|ref|ZP_18836673.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
gi|389801826|emb|CCI19076.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
Length = 789
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 236/785 (30%), Positives = 367/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFASTKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILGALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQ----------SGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P EEI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESEEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425450195|ref|ZP_18830027.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
gi|389769051|emb|CCI05979.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
Length = 789
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 234/785 (29%), Positives = 369/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G +PI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------IPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQ----------AGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425439812|ref|ZP_18820127.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
gi|389719875|emb|CCH96352.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
Length = 789
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 236/785 (30%), Positives = 368/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQ----------AGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P EEI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESEEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|422303606|ref|ZP_16390957.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
gi|389791362|emb|CCI12788.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
Length = 789
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 235/785 (29%), Positives = 369/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIKERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSDRWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAAVMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVTEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQA----------GTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425434478|ref|ZP_18814947.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
gi|389676022|emb|CCH94894.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
Length = 789
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 234/785 (29%), Positives = 369/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERGHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S + ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKASQKEQIPGIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G +PI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------IPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTEV-STRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK GK+ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQA----------GTKTGKDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|427723948|ref|YP_007071225.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
gi|427355668|gb|AFY38391.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
Length = 801
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 232/790 (29%), Positives = 370/790 (46%), Gaps = 148/790 (18%)
Query: 47 SRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSL--------RLLD 98
+++ E+L +LEW +LC +S+FA T LG A ++ +Q + L L
Sbjct: 2 TQIQTETLNLLEWQRLCQHLSTFAATKLGAIAARNLVFPGSQAESEILLAQTVEITELDA 61
Query: 99 ETNAAIEMQKHGSCSLDL---------TGVDLSLVKSAIREVRRASPLRPNEALAVVALL 149
ET I + G+ S L +G DL L+ + + VR+ L N L + LL
Sbjct: 62 ETEGGISFEGIGNVSESLERATIGGIISGQDLLLIATTLAGVRKLRRLVENSELELPQLL 121
Query: 150 QFSETLQL------SLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNEN 192
E L+ + I + D+ R P +YQ ++ +++
Sbjct: 122 FLVEQLRTYPELEKEIHHCIDDRGDVTDRASPKLAGIREKMKGARDGIYQTLNRIMQRHG 181
Query: 193 NESLFLEVSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARA 249
++ R + A Q G++ +SS+G +EP + + L + L+QA
Sbjct: 182 GSIQEAVITQRGDRFVLPVKAGQKEHIPGIVHDISSTGSTFYVEPKAIIDLGNRLRQATK 241
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
+ E +L LTEK+ ++++EK+L +D+ AR+ YS P P
Sbjct: 242 QEQREIEIILRQLTEKVAEVVEDLEKLLAIATTIDLATARSRYSHWLEANPPKFTKP--- 298
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
E L K +HPLL+ Q KQ+
Sbjct: 299 ------------------EQPTMLRKLHHPLLVWQQKQE--------------------- 319
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
E VPI++ I +V+ ITGPNTGGKT+ LKT+
Sbjct: 320 ------------------------EGDEVVPINVQIRPDIKVVAITGPNTGGKTVTLKTL 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
G+A +MAK GL I + ++PWF+ V ADIGDEQSL QSLSTFSGH++++G II +
Sbjct: 356 GMAALMAKVGLFIPAIAPVELPWFNHVLADIGDEQSLQQSLSTFSGHIRRVGRIIETLQA 415
Query: 490 Q---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
+ +LVLLDE+GAGT+P EG+AL ++LL+ A+ +L T+ATTH+GELK LKY +D FE
Sbjct: 416 EDENNLVLLDEVGAGTDPTEGSALAIALLKYLADHAAL-TVATTHYGELKALKYDDDRFE 474
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA +EFDE L+PTYK+LWG+PGRS+A+ IA+RLGL V+ A+ L G ++ ++NEVI
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAKRLGLDEQVIDAAQSLLGNSNTDVNEVIA 534
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIAR 666
+E + + + EA L + + + + + + Q++ +A A A+
Sbjct: 535 ALEAQRREQEQKSQEAEALLKQTERFYTEVSSKAADLQRRETELKQAQDQQVQEAIAEAK 594
Query: 667 SLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKV 726
S + A R+L Q+ +PSA ++ T
Sbjct: 595 SEI----------AQVIRTL-----QKGKPSAQKAQKAT--------------------- 618
Query: 727 EHPATASSSVVKDIKQSPRVKRTEL-PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGN 785
A + ++ P+ K+ P +G+ + +S G+ VI++ + +V + G
Sbjct: 619 ----NALGEIAQEKLAQPKKKKAGYQPKLGEKIRISKLGQTAEVIELNEENKTLVARFGI 674
Query: 786 MKWIMKFTDI 795
MK +++T+I
Sbjct: 675 MKMSLQWTEI 684
>gi|440751890|ref|ZP_20931093.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
gi|440176383|gb|ELP55656.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
Length = 789
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 235/785 (29%), Positives = 369/785 (47%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLEQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQ----------AGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|425460157|ref|ZP_18839639.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
gi|389827152|emb|CCI21729.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
Length = 789
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 235/785 (29%), Positives = 368/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKASQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYRDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQA----------GTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|390440129|ref|ZP_10228481.1| MutS2 protein [Microcystis sp. T1-4]
gi|389836495|emb|CCI32605.1| MutS2 protein [Microcystis sp. T1-4]
Length = 789
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 235/785 (29%), Positives = 368/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFTATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGITDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQMKVIRERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R + A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSERWVLPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P+
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPHF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G VPI++ I+ + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------VPINVQISPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYQDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAQEASQLLQQTEKFYTEV-STRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK GK+ T T + + P
Sbjct: 578 QEIQKALLSAKAEINEVIRRLQA----------GTKTGKDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P EEI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESEEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|443646823|ref|ZP_21129501.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
gi|159028850|emb|CAO90655.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335652|gb|ELS50116.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
Length = 789
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 234/785 (29%), Positives = 367/785 (46%), Gaps = 152/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A + + ++ ++SL LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFAATKLG--AIAIRQLPLPESKEESLNLLCQTKEVYSLEQKLD 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ +++ + +R +RR + E + V
Sbjct: 63 SRLSFDGISDIGDALERAHLGGLLSGQELLNIATTLAGVRRLRRL--IDEQEDIPVLKEL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNE 194
VA ++ ++ + I ED + R P + + +Y+ + +++ +
Sbjct: 121 VAEIRTYPEIEQEIHRCIDEDGRISDRASPQLREIRGQIKVIKERIYRKLQDIMQKQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ R I A Q G++ +S G+ IEP S V ++L+Q R
Sbjct: 181 IQEAVITQRSERWVIPVKAAQKEQIPGIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE +L L+ + +++E +L +LD+ ARA YSL G P
Sbjct: 241 QIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPPRF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
+ SE TI L HPLL Q+H ++ G
Sbjct: 293 ----------IDGSE---TITLRNLRHPLLWWQKHHEQ---------------------G 318
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G +PI++ I + RV+ ITGPNTGGKT+ LKT+G
Sbjct: 319 GEV-------------------------IPINVQITPEIRVVAITGPNTGGKTVTLKTLG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
LA +MAK+GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I++ S+
Sbjct: 354 LAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSR 413
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVLLDE+GAGT+P EG+ L +++L+ A+ SLLT+ATTH+GELK LKY + FENA +
Sbjct: 414 SLVLLDEVGAGTDPAEGSPLAIAILQYLADH-SLLTVATTHYGELKALKYQDSRFENASV 472
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD+ L PTY++LWG+PGRS+A+ IA+RLGL +V AR G S EIN+VI +E
Sbjct: 473 EFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEINQVIAGLEA 532
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ + EA L + + + TR L+ +R R++++ +
Sbjct: 533 QRREQESKAKEASQLLQQTEKFYTE-VSTRANSLQ----ERERELKRYQE---------- 577
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
+ Q+ SA + V +R Q TK G++ T T + + P
Sbjct: 578 QEIQKALLSAKAEINDVIRRLQ----------AGTKTGRDAQKATEEL--TAIAERLLPK 625
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
T + V P VG+ V + + G+ V+ + P +EI ++ G MK +
Sbjct: 626 TEKTKV------------NYRPQVGERVRLPNLGQTAEVLAISPESDEISLRFGMMKMTL 673
Query: 791 KFTDI 795
I
Sbjct: 674 PLDQI 678
>gi|428317789|ref|YP_007115671.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241469|gb|AFZ07255.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
Length = 874
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 237/828 (28%), Positives = 379/828 (45%), Gaps = 176/828 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A L Q + L+ + +E + G+
Sbjct: 14 ETLELLEWPRLCQHLATFAATKLGVAAALDLPIPATQAHTAELKAQTQEAYQLENRAGGA 73
Query: 112 CSLD-----------------LTGVDLSLVKSAI---REVRRASPLRPNEAL--AVVALL 149
S + L+G +L + + + R++RR +P+ + A L
Sbjct: 74 LSFEGIQDIGTSLQRAELQGLLSGEELLAIATTLAGARQLRRIIDSQPDVPTLQELAAQL 133
Query: 150 QFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNESLFL 198
+ L+ + I + A + R P L +YQ++ +++ ++N
Sbjct: 134 RTYPELEQEIHRCIDDRAQVADRATPKLAGIRVQMRQLRDRIYQILQGILQRQSNAVQEQ 193
Query: 199 EVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
++ GR I A Q + G++ SS G+ +EP S V LN++++Q E
Sbjct: 194 LITQRSGRFVIPVKAPQKDAIPGIVHDSSASGATLYVEPHSTVNLNNQMRQLLRQEQAEE 253
Query: 256 EDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTH 315
E V ALTE++ ++++++ + LD+ A+A YS P F+
Sbjct: 254 EAVRRALTEQVAAVKPDLDRLVVVVTTLDLATAKARYSYWLQANPPK-FIELGEPELAPK 312
Query: 316 EPVTSKVSSSEREWT-------------IYLPKAYHPLLL--QQHKQKTQQAWKDLESAN 360
P T ++ E + I L + HPLL+ QQH+Q
Sbjct: 313 NPETEDEEKADEENSENSQLLIPNLRSQITLRQLRHPLLVWQQQHEQ------------- 359
Query: 361 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNT 419
PV P+D+ I RV+ ITGPNT
Sbjct: 360 -----------------------------------GFPVVPVDLTIGPHIRVVAITGPNT 384
Query: 420 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 479
GGKT+ LKT+GLA +MAK+G+ + + E ++PWFD++ ADIGDEQSL QSLSTFSGH+++
Sbjct: 385 GGKTVTLKTLGLAALMAKAGMFVAAREPVELPWFDNILADIGDEQSLQQSLSTFSGHIRR 444
Query: 480 IGNII------------------SQ--------STSQSLVLLDEIGAGTNPLEGTALGMS 513
I I+ SQ +SLVLLDE+GAGT+P EG+AL ++
Sbjct: 445 ISRILEVLHNKSEGESAGEGEENSQFPMPHAQFPMPKSLVLLDEVGAGTDPSEGSALAIA 504
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
LL+ A+ SLLT+ATTH GELK LKY + FENA +EFD+ ++PTY++LWG+PGRS+A
Sbjct: 505 LLKYLAQH-SLLTVATTHFGELKALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNA 563
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH 633
+ IA+RLGL +V+ A+ G AS ++N+VI +E + + EA L + LH
Sbjct: 564 LTIAKRLGLLPEIVEEAQTYVGGASQDVNQVIAGLEAQRRKQETKAREATQLLHQTEKLH 623
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHK------SAQQLCPSASQARSLV 687
+ + + + E + + +++A A+S + + S Q +A QA +
Sbjct: 624 REVSQKAAALQERERELKIAQEVAVNEAIGSAKSEIAQIIRRLQSGNQTAQNAQQATETL 683
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
++ +Q+ PS Q PA + K
Sbjct: 684 NQISQKHLPSRQQ----------------------------PA--------------KPK 701
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P GD + + S G+ V+ + EE+ V+ G MK +K +I
Sbjct: 702 PGFMPKAGDRIRIPSLGQTAEVLSGPDANEELSVRFGIMKMTVKLGEI 749
>gi|428200893|ref|YP_007079482.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
gi|427978325|gb|AFY75925.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
Length = 824
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 240/817 (29%), Positives = 375/817 (45%), Gaps = 183/817 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW++LC +++FA T +G A + I T +SL+LL +T ++++
Sbjct: 5 ETLELLEWNRLCQHLATFAATKVG--AVAARNLEIPTTKTESLQLLAQTKEVYQLEQDLE 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLR---PNEALAVV 146
G+ D++ + +R +RR R P V
Sbjct: 63 TGWSFDGIADIGESLERAKLGGMLSGQELLDIATTLAGVRRLRRVIDNREDIPVLTELVA 122
Query: 147 ALLQFSETLQ-----------LSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNES 195
+ + E Q ++ RA+ K A + R + +YQ + +++ +
Sbjct: 123 EIRTYPEIEQEIHRCIDDAGKVADRASPKL-ASIRARLKEVRDSIYQKLQSILQRQGGAV 181
Query: 196 LFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
++ R I A Q G++ +S G+ IEP + V L ++L+Q R
Sbjct: 182 QEPVITQRGDRFVIPVKAPQKDQIPGIIHDTSSTGATLYIEPNAIVNLGNQLRQYRRQEQ 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
EE +L ALTE++ ++E +L LD+ ARA YSL G +P D +
Sbjct: 242 AEEEAILRALTERVAAVESDLEYLLAVATILDLATARARYSLWLEGNAPRFI---DFEEG 298
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
EP+T L + HPLL+ QH+ +
Sbjct: 299 ---EPIT-------------LRQLRHPLLVWQHQHE------------------------ 318
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
+ A VPI++ I K RV+ ITGPNTGGKT+ LKT+GLA
Sbjct: 319 ---------------------QGADVVPINVQIDPKIRVVAITGPNTGGKTVALKTLGLA 357
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL--------------- 477
+MAK GL I + E ++PWF+ V ADIGDEQS+ QSLSTFSGH+
Sbjct: 358 ALMAKVGLFIPAREPVELPWFEQVLADIGDEQSIEQSLSTFSGHIRRIIRIIDTLKAEFS 417
Query: 478 -------------------KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
+ IG I ++ +QSL+LLDE+GAGT+P EG+AL ++LL+
Sbjct: 418 SSRVQKDPDDNRQAQEWDSEAIGKI-QRTNNQSLILLDEVGAGTDPAEGSALAIALLKYL 476
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
A++ +LLTIATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A+ IA+
Sbjct: 477 ADN-ALLTIATTHYGELKALKYQDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALAIAQ 535
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V+ AR+ G S EIN+ I +E + + EA L + +
Sbjct: 536 RLGLGQEIVEEARKRVGGYSEEINQTIAGLEAQRREQELKAKEASQLLQQTERFYT---- 591
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+I E AS + R+ R L +++ + +QA++ + K +QL+
Sbjct: 592 ---EISEKAASLQERE-----------RELKQYQEREVQKAIAQAKAEIAKVIRQLQ--- 634
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ +N T Q ++ P SS+ LP VG+ +
Sbjct: 635 ----QGSPTAQNAQKATEAIGQIAETRLPKPEKHSSNY--------------LPKVGERI 676
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + G+ V+ + + EE+ V+ G MK + T+I
Sbjct: 677 RLPNLGQTAEVLNL--ADEEVTVRFGLMKMTVPLTEI 711
>gi|282900091|ref|ZP_06308048.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
gi|281194973|gb|EFA69913.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
Length = 815
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 246/798 (30%), Positives = 368/798 (46%), Gaps = 154/798 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +SSFA T LG +T+ I T ++S LL +T +++
Sbjct: 2 IATETLELLEWSRLCQHLSSFAATKLG--TIVTRSLPIPSTLEESEGLLCQTKEVYQLES 59
Query: 109 HGSCSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEALAV- 145
L G+ ++ + R +RR + E L +
Sbjct: 60 QLISGLSFEGIQDIGDSLERAELHGLLSSEELLAIATTLAGARNLRRV--IDNQEDLPIL 117
Query: 146 ---VALLQFSETLQLSLRAAIKEDADLYIR-----------FMPLTQMLYQLMDMLIRNE 191
V+ L+ L+ + I E A + R L + Q + +I+ +
Sbjct: 118 CDLVSQLRTYPELEQEIHHCIDERAQIADRASQKLSEIREDLRKLRSQITQKLHNIIQVK 177
Query: 192 NNESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
+N L ++ R + A Q + G++ SS G+ IEP S V + ++L+Q
Sbjct: 178 SNALQELIITQRGDRYVLPVKAVQKDAVPGIVHDSSTSGATLYIEPNSIVSMGNQLRQTL 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
E +L LT K+ ++EK+L + +DV A+A YSL G P +
Sbjct: 238 KREQVEIEAILRILTTKVAEVKPDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRLI---- 293
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
P SSSE I L + HPLL+ Q K
Sbjct: 294 -------HPSIPGGSSSE---IITLRQLRHPLLVWQQKH--------------------- 322
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICLK 427
E HPV P+D+ I+ +V+ ITGPNTGGKT+ LK
Sbjct: 323 -------------------------EQGHPVVPVDLLISPHIKVVTITGPNTGGKTVTLK 357
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ- 486
T+GLA +MAK GL I + E ++PWF V ADIGDEQSL+QSLSTFSGH+++I I++
Sbjct: 358 TLGLAALMAKVGLFIPAREPVEIPWFSHVLADIGDEQSLAQSLSTFSGHIRRISRILNAI 417
Query: 487 ---------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
TS SL+LLDE+GAGT+P EG+AL ++LL+ + LTIATTH GELK+
Sbjct: 418 GEERQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQ-LTIATTHFGELKS 476
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKY + FENA +EF+E L PTY++LWG+PGRS+A+ IA RLGL VV+NA+ G
Sbjct: 477 LKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKSQLGET 536
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 657
+ E+N+VI +E + A+ L + L+K + ++R + R Q+
Sbjct: 537 TDEVNQVIAGLEAQRRSQETKAAAAQELLKQTEKLYKEV--SQRATALEEREKDLRASQE 594
Query: 658 ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 717
I+ V K+ Q +Q V ++ QQ +P+A + TK +LT
Sbjct: 595 IA---------VQKAITQAKGEIAQ----VIRQLQQGKPTAQDAQKATK------LLTE- 634
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
DK + A P+VK+ +P G+ V + G+ VI
Sbjct: 635 ----IADKYQPVA------------PPKVKQGFIPEPGERVRIPKLGQTAQVISAADGNG 678
Query: 778 EIVVQVGNMKWIMKFTDI 795
E+ V+ G MK + D+
Sbjct: 679 ELTVRFGMMKMTVNLEDV 696
>gi|409991618|ref|ZP_11274864.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
gi|291572107|dbj|BAI94379.1| MutS2 family protein [Arthrospira platensis NIES-39]
gi|409937528|gb|EKN78946.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
Length = 816
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 237/803 (29%), Positives = 369/803 (45%), Gaps = 168/803 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A + +I +T +++ RLL +T A ++Q
Sbjct: 5 ETLELLEWHRLCKHLATFTATKLG--AFAARQLAIPETKEETDRLLAQTKEAYQLQLKLV 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETL---------------- 155
L L G+ + +++ R L E LA+ L + L
Sbjct: 63 QGLSLDGI--QDIGASLERADRQGILFGEELLAIATTLAGARQLRRVIDDQEDVPVLTSL 120
Query: 156 ----------------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN 193
+++ RA++K ++ R +YQ++ +++ +
Sbjct: 121 VEELRTYPELEQEIHRCIDERGEVTDRASVKM-GEIRARLQSTRDRIYQILQGILQRKAQ 179
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSVI--EPLSAVPLNDELQQ-ARA 249
V+ GR I A Q + G++ +S G+ + EP V LN+EL+Q RA
Sbjct: 180 AVQQQIVTQREGRFVIPVKAPQKDAIPGIVHDASTTGATVYVEPHPIVALNNELRQIQRA 239
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
T+AE + +LTE++ + ++EK+L + +D+ A+A YS P P D
Sbjct: 240 EQTEAEA-IRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLKANPPRFIDPGD- 297
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+SE TI L + HPLL+ W+ E+
Sbjct: 298 --------------TSE---TINLRQLRHPLLI----------WQQEYEQGPEV------ 324
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VPIDI I + RV+ ITGPNTGGKT+ LKT+
Sbjct: 325 -----------------------------VPIDITINPQIRVVAITGPNTGGKTVTLKTI 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS---- 485
GLA +MAK GL I + E ++PWF V ADIGDEQS+ QSLSTFSGH+++I I+
Sbjct: 356 GLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQAIGE 415
Query: 486 ----------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 535
QSLVLLDEIGAGT+P EGTAL ++LL+ FA+ + LT+ATTH G+L
Sbjct: 416 PMRVTEAGEYDRICQSLVLLDEIGAGTDPTEGTALAIALLQTFADR-TRLTVATTHFGDL 474
Query: 536 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 595
K LKY + FENA +EF++ L+PTY++LWG+PGRS+A+ IAERLGL +V+ A G
Sbjct: 475 KALKYKDTRFENASVEFNDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGSYVG 534
Query: 596 AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKV 655
++N+VI +E + Q A L + LH L E S + R+
Sbjct: 535 GGDEDVNQVIAGLEAQRRQQETKAIAASQLLKETERLHGEL-------AERAISLQERE- 586
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHK---RAQQLRPSASQSLHCTKVGKNQH 712
R L +++ + QA+ + K R QQ +P+A+ + T
Sbjct: 587 ----------RQLKQAQEKEIKETLLQAKGEIAKVIRRLQQGKPTAADAQKAT------- 629
Query: 713 VLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKV 772
T+D + + + + + +P +P VGD + + G+ ++
Sbjct: 630 --------ATLDAI------AENYLPSRQATPAPLPNFMPKVGDRIRIPRIGQTAEILSG 675
Query: 773 EPSKEEIVVQVGNMKWIMKFTDI 795
++ V+ G MK + +I
Sbjct: 676 PDDNNQLTVRFGIMKMTVGLGEI 698
>gi|428301815|ref|YP_007140121.1| MutS2 protein [Calothrix sp. PCC 6303]
gi|428238359|gb|AFZ04149.1| MutS2 protein [Calothrix sp. PCC 6303]
Length = 796
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 241/793 (30%), Positives = 368/793 (46%), Gaps = 161/793 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A ++ I + S LL +T +++ S
Sbjct: 8 ETLELLEWSRLCQHLANFAATKLG--AIASRNLQIPTSQAQSENLLAQTQEIYKLESRIS 65
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L G+ + AI L E LA+ L + +LR I DL I
Sbjct: 66 PGLSFEGI--QDIGDAIERAALQGILAGEELLAIATTLAGTR----NLRRIIDNQEDLPI 119
Query: 172 --------RFMP-LTQMLYQLMDML-------------IRNENNESLFLEVSSIHGRLCI 209
R P + Q +++ +D IR E +S + + L +
Sbjct: 120 LLDLVADLRTYPEIEQEIHRCVDERGQIADRASQKLGDIRAELRKSRSQIIQKLQNILQV 179
Query: 210 RTGADQ----------------LSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQA 247
++ A Q S K ++ S+SG+ IEP S VP+ ++L+Q
Sbjct: 180 KSNAVQENVITQRGDRYVIPVKASHKDVIHGIVHDTSTSGVTLYIEPNSVVPMGNQLRQL 239
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
EE + LT ++ D++E++L + LD+ A++ YS P
Sbjct: 240 IRKEEIEEEVIRRQLTAQVADIKDDLERLLAIVTTLDLATAKSRYSFWLKANPPRFV--- 296
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRK 367
E TI L K HPLL QH+
Sbjct: 297 ----------------DREANETITLRKLRHPLLEWQHQH-------------------- 320
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICL 426
E H V P+D+ I +TRV+ ITGPNTGGKT+ L
Sbjct: 321 --------------------------EQGHEVIPVDLVIQPETRVVTITGPNTGGKTVTL 354
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
KT+ LA +MAK GL + + E ++PWF+ V ADIGDEQSL QSLSTFSGH+++I I++
Sbjct: 355 KTLALAALMAKVGLFVPAREPVELPWFEQVLADIGDEQSLQQSLSTFSGHIRRISRILNA 414
Query: 487 ST----SQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
T + SLVLLDE+GAGT+P+EG+AL ++LL A + LLT+A+TH GELK LKY +
Sbjct: 415 ITGDTVTPSLVLLDEVGAGTDPVEGSALAIALLHHLA-NHVLLTMASTHFGELKALKYQD 473
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
+ FENA +EFD+ L PTYK+LWG+PGRS+A+ IA+RLGL V++ A+Q G A+ E+N
Sbjct: 474 ERFENASVEFDDATLSPTYKLLWGIPGRSNALAIAQRLGLSVDVIEAAKQQMGGANDEVN 533
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
EVI +E + + EA++ L + L+K + + E + + + + +A
Sbjct: 534 EVIAGLEAQRRRQETKASEAQNLLHQAEKLYKEVSAKATNLEEREQALKASQEVAVQNAI 593
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
A A+ + K V K Q+ +P+A ++ T T
Sbjct: 594 AQAKGEIAK---------------VIKGLQKGKPTAQEAQQAT---------------NT 623
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
++++ S+ + K +P+ +P GD + ++ G+ VI S E+ V+
Sbjct: 624 LNQI------STQFIP--KAAPKAPIGFIPKTGDRIRITKIGQTAEVITPPNSDGELNVR 675
Query: 783 VGNMKWIMKFTDI 795
G MK +K DI
Sbjct: 676 FGIMKMTVKLEDI 688
>gi|443327052|ref|ZP_21055687.1| MutS2 family protein [Xenococcus sp. PCC 7305]
gi|442793341|gb|ELS02793.1| MutS2 family protein [Xenococcus sp. PCC 7305]
Length = 804
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 237/797 (29%), Positives = 373/797 (46%), Gaps = 159/797 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +++FA T +G A Q + Q+ + SL+LL +T +++
Sbjct: 2 ITTETLNLLEWHRLCEHLATFAETKIG--AVAAQNLQLPQSKEVSLQLLAQTTEIYNLEQ 59
Query: 109 HGSCSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAVV 146
GV D++ + IR +RR + E L V+
Sbjct: 60 ELDSGWTFRGVKDIGVALERTKIGGILSAQELLDIATTLAGIRYLRRIIDSK-TEELPVL 118
Query: 147 ALLQFS----ETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNE 191
L F ++ + I + ++ R P L + + Q + +I++
Sbjct: 119 NELIFPVRTYPEIEQQIHHCIDDRGEITDRANPRIAGIRAKVKSLRRQIRQSLQRIIQSN 178
Query: 192 NNESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQAR 248
++ R I Q + G++ +SS+G IEP S V + L+QA
Sbjct: 179 LGSVQEAVITQRSDRFVIPVKPGQKETIPGIVHDVSSTGSTLYIEPSSVVNAGNALRQAE 238
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
+ EE VL LTEK+ +++E++L LD+ ARA YSL P
Sbjct: 239 KQQKREEEIVLRELTEKITEVQEDLEELLAIATVLDLATARARYSLWLEANPPRFI---- 294
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
ER T+ L + HPLL+ Q K ++
Sbjct: 295 -----------------ERSETVTLRRLQHPLLVWQQKHES------------------- 318
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
G A VPID+ I +TRV+ ITGPNTGGKT+ LKT
Sbjct: 319 --GTAV------------------------VPIDVKIEPQTRVVAITGPNTGGKTVTLKT 352
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS--- 485
+GLA +MAK+G+ + + ++PWF++V ADIGDEQSL QSLSTFSGH+++I II
Sbjct: 353 IGLAALMAKAGIFVPAKVPVEIPWFNTVLADIGDEQSLQQSLSTFSGHIRRISRIIEALK 412
Query: 486 ------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 539
+ S SLVLLDE+GAGT+P EG+AL ++LL+ AE SLLT+ATTH+GELK LK
Sbjct: 413 PQEELKANCSNSLVLLDEVGAGTDPAEGSALAIALLKYLAEH-SLLTVATTHYGELKALK 471
Query: 540 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AAS 598
Y ++ FENA +EFD+ L+PTY++LWG+PGRS+A+ IA+RLGL +V +A+ L G +
Sbjct: 472 YQDERFENASVEFDDSSLQPTYRLLWGIPGRSNALTIAQRLGLDSEIVTDAQNLVGIGKT 531
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 658
++N+VI +E + + EA L + ++ + SQR +Q
Sbjct: 532 DDVNQVIAALENQRREQESKAEEAGKLLSQTELFYEEV------------SQRAESLQAR 579
Query: 659 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 718
+++ K+ Q+ A + V +R QQ +A ++ T+
Sbjct: 580 EQELKLSQ---EKAVQKAIAEAKAEIAQVIRRLQQGNQTAQKAQQATEA----------- 625
Query: 719 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 778
++K+ + ++ K P P VG+ V + + G V+ +E + +
Sbjct: 626 ----LNKI----ASKQAIAKPKAPKPGYH----PQVGEKVRIPRLNQTGEVLSIEENS-Q 672
Query: 779 IVVQVGNMKWIMKFTDI 795
+ V+ G MK + T+I
Sbjct: 673 LTVRFGLMKMTVGVTEI 689
>gi|376003750|ref|ZP_09781556.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
gi|375327894|emb|CCE17309.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
Length = 818
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 369/800 (46%), Gaps = 162/800 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A + +I +T +++ RLL +T A +++
Sbjct: 7 ETLELLEWHRLCKHLATFTATKLG--AFAARQLAIPETKEETDRLLAQTKEAYQLELKLV 64
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETL---------------- 155
L L G+ + +++ R L E LA+ L + L
Sbjct: 65 QGLSLDGI--QDIGASLERADRQGILFGEELLAIATTLAGARQLRRVIDDQEDVPVLTSL 122
Query: 156 ----------------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN 193
+++ RA++K A + R +YQ++ +++ +
Sbjct: 123 VEELRTYPELEQEIHRCIDERGEVTDRASVKMGA-IRARLQSTRDRIYQVLQGILQRKAQ 181
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSVI--EPLSAVPLNDELQQ-ARA 249
++ GR I A Q + G++ +S G+ + EP S V LN++L+Q RA
Sbjct: 182 AVQQQIITQREGRFVIPVKAPQKDAIPGIVHDASTTGATVYVEPHSIVALNNQLRQIQRA 241
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
T+AE + +LTE++ + ++EK+L + +D+ A+A YS P P D
Sbjct: 242 EQTEAEA-IRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGD- 299
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+SE TI L + HPLL+ W+ E+
Sbjct: 300 --------------TSE---TINLRQLRHPLLI----------WQQEYEQGPEV------ 326
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VPIDI I + RV+ ITGPNTGGKT+ LKT+
Sbjct: 327 -----------------------------VPIDITINPQIRVVAITGPNTGGKTVTLKTI 357
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII----- 484
GLA +MAK GL I + E ++PWF V ADIGDEQS+ QSLSTFSGH+++I I+
Sbjct: 358 GLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQAIGE 417
Query: 485 ---------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 535
S SLVLLDEIGAGT+P EGTAL ++LL+ FA+ + LT+ATTH G+L
Sbjct: 418 PMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADL-TRLTVATTHFGDL 476
Query: 536 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 595
K LKY + FENA +EFD+ L+PTY++LWG+PGRS+A+ IAERLGL +V+ A G
Sbjct: 477 KALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGSYVG 536
Query: 596 AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKV 655
++N+VI +E + Q A L + LH L E S + R+
Sbjct: 537 GGDEDVNQVIEGLEAQRRQQETKAIAASQLLQETERLHGEL-------AERAISLQERE- 588
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLT 715
R L Q++ + QA++ + K ++L+ + + K +
Sbjct: 589 ----------RQLKQAQEQEIKETLLQAKAEIAKVIRRLQQGKATAADAQKATARLDAIA 638
Query: 716 SNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPS 775
N+ P+ ++ V +SP +P VGD + + G+ ++
Sbjct: 639 ENY---------LPSRQATPV-----RSPNF----MPKVGDRIRIPRIGQTAEILSGPDD 680
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
++ V+ G MK + +I
Sbjct: 681 NNQLTVRFGIMKMTVGLGEI 700
>gi|443320530|ref|ZP_21049624.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
gi|442789744|gb|ELR99383.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
Length = 793
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 229/790 (28%), Positives = 369/790 (46%), Gaps = 155/790 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A + I S LL +T ++Q+H S
Sbjct: 5 ETLDLLEWRRLCQHLSTFAATKLGVSAARELI--IPSNLATSRELLTQTQEIWQLQEHFS 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRR------ASPLRPNEAL 143
+ G+ D++ + +R++R+ +P+ N
Sbjct: 63 TAWSFQGIKDIRPFLLRAQLKGTLLGTELLDIASTVAGVRKLRKIIEEQSETPVLENLVA 122
Query: 144 AVVALLQFSETLQLSL--------RAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN-- 193
V + + + + RA++K A++ + + +++ +I+ + N
Sbjct: 123 TVRTYPELEQEIYYCIDEGGEVEDRASLKL-AEIRSKLKEFRNKIQKILQGIIQRQGNAL 181
Query: 194 -ESLFLEVSSIHGRLCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARAS 250
E+L + S L ++T + G++ SS GS +EP + + L ++L+Q
Sbjct: 182 QETLITQRSD-RFVLPVKTPHKE-QIPGIVHDSSSTGSTLYVEPQAIIQLGNQLKQLLRR 239
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
E VL ALTEK+ ++E+++ LD+ ARA YS P +
Sbjct: 240 EQAEIEIVLKALTEKVAAITSDLEQVVLVATTLDLATARANYSYWLNAHPPQLI------ 293
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYG 370
S ++E TI L + HPLL+ Q K +
Sbjct: 294 -------------SLDQEATITLRELKHPLLIWQEKHEQ--------------------- 319
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G A VPI++ I RV+ ITGPNTGGKT+ LKT+G
Sbjct: 320 GPAV------------------------VPINVRIQPDIRVVAITGPNTGGKTVTLKTIG 355
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS----- 485
+A +MAK GL I +++ ++PWF+ + ADIGDEQSL QSLSTFSGH+K+I I+
Sbjct: 356 IAALMAKVGLFIPAADPVEIPWFEKILADIGDEQSLEQSLSTFSGHIKRIIRILDAIGRP 415
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
+ +LVLLDE+GAGT+P EGTAL ++LL+ A+S + LTIATTH+GELK LKY + F
Sbjct: 416 EDLRSALVLLDEVGAGTDPTEGTALAIALLQHLADS-AWLTIATTHYGELKALKYQDSRF 474
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
ENA +EFDE L PTY++LWG+PGRS+A+ IA RLGL +V+ A+ G + EIN+VI
Sbjct: 475 ENASVEFDEATLAPTYRLLWGIPGRSNALMIARRLGLDLEIVEQAKSKVGGYAEEINQVI 534
Query: 606 IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIA 665
+E + + A L + + + S + + +Q+ +A
Sbjct: 535 AGLEAQRKEQENKAQAANQLLQETERFYGEI------------SAKAKALQQREQELKLA 582
Query: 666 RSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK 725
++ Q + + SQA++ + + + L+ + + K N + N+ T
Sbjct: 583 QT------QAMQEALSQAKAEIAQVIRTLQQGEQTAQNAQKARGNLETIADNYLNTQA-- 634
Query: 726 VEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGN 785
+ +RT P VG+ + + S G+ V+ ++ E+ V+ G
Sbjct: 635 -------------------KPQRTYQPQVGEKIKIPSLGQTAEVLTNPDAQGELTVRFGL 675
Query: 786 MKWIMKFTDI 795
MK + +DI
Sbjct: 676 MKMTVNLSDI 685
>gi|282896735|ref|ZP_06304743.1| MutS 2 protein [Raphidiopsis brookii D9]
gi|281198453|gb|EFA73341.1| MutS 2 protein [Raphidiopsis brookii D9]
Length = 814
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 244/798 (30%), Positives = 369/798 (46%), Gaps = 155/798 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +SSFA T LG + + I T ++S LL +T +++
Sbjct: 2 IATETLELLEWPRLCQHLSSFATTKLG--TIVARSLPIPSTLEESEGLLCQTKEVYQLES 59
Query: 109 HGSCSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEALAV- 145
L G+ ++ + R +RR + E L +
Sbjct: 60 QLISGLSFEGIQDIGDSLERAELHGLLSSEELLAIATTLAGARNLRRV--IDNQEDLPIL 117
Query: 146 ---VALLQFSETLQLSLRAAIKEDADLYIR-----------FMPLTQMLYQLMDMLIRNE 191
V+ L+ L+ + I E A + R L + Q + +I+ +
Sbjct: 118 CDLVSQLRTYPELEQEVHHCIDERAQIADRASQKLSEIREDLRKLRSQITQKLHNIIQVK 177
Query: 192 NNESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
+N L ++ R + A Q + G++ SS G+ IEP S V + ++L+Q
Sbjct: 178 SNALQELIITQRGDRYVLPVKAPQKDAVPGIVHDSSTSGATLYIEPNSIVSMGNQLRQTL 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
E +L LT K+ ++EK+L + +DV A+A YSL G P + P
Sbjct: 238 KREQVEIEAILRILTTKVAEVKPDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRLIHP-- 295
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
+ SSS+ I L + HPLL+ Q K
Sbjct: 296 ----------SIPGSSSQ---IITLRQLRHPLLVWQQKH--------------------- 321
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICLK 427
E HPV P+D+ I+ +V+ +TGPNTGGKT+ LK
Sbjct: 322 -------------------------EQGHPVVPVDLLISPHIKVVTMTGPNTGGKTVTLK 356
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ- 486
T+GLA +MAK GL I + E ++PWF V ADIGDEQSL+QSLSTFSGH+++I I++
Sbjct: 357 TLGLAALMAKVGLFIPAREPVEIPWFSQVLADIGDEQSLAQSLSTFSGHIRRISRILNAI 416
Query: 487 ---------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
TS SL+LLDE+GAGT+P EG+AL ++LL+ + LTIATTH GELK+
Sbjct: 417 GEEIQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQ-LTIATTHFGELKS 475
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKY + FENA +EF+E L PTY++LWG+PGRS+A+ IA RLGL VV+NA+ G
Sbjct: 476 LKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKSQLGGT 535
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 657
+ E+N+VI +E + A+ L + L+K + ++R + R Q+
Sbjct: 536 TDEVNQVIAGLEAQRRSQETKAAAAQELLKQTEKLYKEV--SQRATALEEREKDLRASQE 593
Query: 658 ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 717
I+ V K+ Q +Q V ++ QQ +P+A + TK +LT
Sbjct: 594 IA---------VQKAITQAKGEIAQ----VIRQLQQGKPTAQDAQKATK------LLTE- 633
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
DK + PA P+VK+ +P G+ V + G+ VI
Sbjct: 634 ----IADKYQ-PAA-----------PPKVKQGFIPEPGERVRIPKLGQTAQVISAADGNG 677
Query: 778 EIVVQVGNMKWIMKFTDI 795
E+ V+ G MK + D+
Sbjct: 678 ELTVRFGMMKMTVNLEDV 695
>gi|428778485|ref|YP_007170271.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
gi|428692764|gb|AFZ48914.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
Length = 798
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 235/792 (29%), Positives = 379/792 (47%), Gaps = 156/792 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLG------------REATLTQLWSINQTYQDSLRL--- 96
E+L +LEW +L +++F T LG RE +LT L + YQ L
Sbjct: 5 ETLSLLEWQRLGEHLATFTSTKLGARVARNLPIPDHRETSLTLLTETKEVYQLEANLTTG 64
Query: 97 -----LDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR------ASPLRPNEALAV 145
+ + +A+E ++ T + ++ A+R +RR ASP A+
Sbjct: 65 WKFEGIYDFGSALERAEYKGILTGETLLQIATTLVAMRRLRRVIDGLEASP----RLKAL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-LTQM----------LYQLMDMLIRNENNE 194
++ ++ L+ + + + + R P L ++ +YQ + +I+ +
Sbjct: 121 ISQVRTYPELEKEINRCLDDKGKVTERASPKLAEIRQKIKERRDRIYQKLQNIIQQQGGA 180
Query: 195 SLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
++ + R + A Q S +G++ SS G+ IEP S V L ++ +Q
Sbjct: 181 IQEPVITQRNDRFVLPVKAGQKESIRGIVHDSSSTGATLYIEPNSVVELGNQQRQYIRQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
+ EE VL LTE++ +++E +L +LD+ AR+ YSL P
Sbjct: 241 QREEERVLQVLTEQVATVKEDLELLLAVATKLDLATARSRYSLWLEANPPRFV------E 294
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYG 370
++EP+T L + HPLL+ QQH
Sbjct: 295 GNSNEPIT-------------LRRLRHPLLVWQQHH------------------------ 317
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
E+ T + VPID+ I +TRV+ ITGPNTGGKT+ LKTVG
Sbjct: 318 -------EQGTPV---------------VPIDVQINPETRVVAITGPNTGGKTVTLKTVG 355
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII-----S 485
LA +MAK GL + + E ++PWFD + ADIGDEQS+ Q+LSTFSGH+++I II S
Sbjct: 356 LAALMAKVGLFVPAKEPVEIPWFDKILADIGDEQSIEQNLSTFSGHIRRITRIIDSLQPS 415
Query: 486 QSTSQS-LVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
S Q L+LLDE+GAGT+P EG+A+ ++LL+ A+ LTIATTH+GELK LKY ++
Sbjct: 416 DSEIQPCLILLDEVGAGTDPAEGSAIAIALLKYLAQQ-VRLTIATTHYGELKALKYQDER 474
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV 604
FENA +EF++ L PTY++LWG+PGRS+A+ IA RLGL G ++ A+ G S +IN+V
Sbjct: 475 FENASVEFNDETLSPTYRLLWGIPGRSNALTIARRLGLAGEILDMAKNRIGGGSEDINQV 534
Query: 605 IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI 664
I +E + + E EAR L A + +++V + A
Sbjct: 535 IAGLENQRREQEEKAQEARQLL-------------------EQAEKFYQEVSSRAQALEA 575
Query: 665 ARSLVHKSAQQLCPSA-SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTV 723
+ + +S +Q A S+A+ + + +QL+ K G+ T+ +V
Sbjct: 576 RETELKRSQEQAVNQAISEAKQEIAQVIKQLQ-------KGEKTGQEAQKATA-----SV 623
Query: 724 DKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQV 783
+++ +S + + P+ K P +G+ V +S F + G V+ + ++ +++
Sbjct: 624 NEI-------ASRHRPQIEPPKPKPNYQPQIGEKVRLSQFNQTGEVLTAPNADGKLTIRL 676
Query: 784 GNMKWIMKFTDI 795
G MK + DI
Sbjct: 677 GTMKMSVSLADI 688
>gi|17135027|dbj|BAB77573.1| DNA mismatch repair protein [Nostoc sp. PCC 7120]
Length = 678
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 285/582 (48%), Gaps = 115/582 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP S VP+ ++L+Q EE + ALTEK+ ++E++L + L
Sbjct: 93 STSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPDLERLLAIVTTL 152
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL- 342
D+ ARA YSL P Q+ + I L + +HPLL+
Sbjct: 153 DMATARARYSLWLKANPPRFIDRQEQE-------------------IITLRQLHHPLLVW 193
Query: 343 -QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPI 401
QQH+Q G+A +P+
Sbjct: 194 QQQHEQ-----------------------GHAV------------------------IPV 206
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
D+ I+ RV+ ITGPNTGGKT+ LKT+GLA +MAK GL + + E ++PWFD V ADIG
Sbjct: 207 DLLISPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIG 266
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQ--------STSQSLVLLDEIGAGTNPLEGTALGMS 513
DEQSL QSLSTFSGH+++I I++ T SLVLLDE+GAGT+P EG+AL ++
Sbjct: 267 DEQSLQQSLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIA 326
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
LL+ A+ L T+ATTH GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A
Sbjct: 327 LLQYLADHAQL-TVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNA 385
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH 633
+ IA RLGL VV+ A+ G A+ E+N VI +E + + EA+ L + L+
Sbjct: 386 LAIALRLGLKAEVVEQAKTQVGEATDEVNLVIAGLEAQRRRQETKAAEAQKILQQAERLY 445
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
K + + E Q + Q+I+ AI +QA+ + K ++
Sbjct: 446 KEVSNKAAALQER--EQSLKASQEIAVQQAI----------------TQAKGEIAKVIRR 487
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
L+ + + + N H + +Q K + +P
Sbjct: 488 LQQGTATAQDAQQATNNLHQIAQKYQPAPPPKAKPGF--------------------VPK 527
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VGD + +S FG+ V+ E+ V+ G MK +K DI
Sbjct: 528 VGDRIRISQFGQTADVLTAPDEDGELTVRFGIMKMTVKLEDI 569
>gi|209523920|ref|ZP_03272472.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|423063765|ref|ZP_17052555.1| MutS2 family protein [Arthrospira platensis C1]
gi|209495592|gb|EDZ95895.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|406714614|gb|EKD09775.1| MutS2 family protein [Arthrospira platensis C1]
Length = 816
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 235/800 (29%), Positives = 369/800 (46%), Gaps = 162/800 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A + +I +T +++ RLL +T A +++
Sbjct: 5 ETLELLEWHRLCKHLATFTATKLG--AFAARQLAIPETKEETDRLLAQTKEAYQLELKLV 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETL---------------- 155
L L G+ + +++ R L E LA+ L + L
Sbjct: 63 QGLSLDGI--QDIGASLERADRQGILFGEELLAIATTLAGARQLRRVIDDQEDVPVLTSL 120
Query: 156 ----------------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN 193
+++ RA++K ++ R +YQ++ +++ +
Sbjct: 121 VEELRTYPELEQEIHRCIDERGEVTDRASVKM-GEIRARLQSTRDRIYQVLQGILQRKAQ 179
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSVI--EPLSAVPLNDELQQ-ARA 249
++ GR I A Q + G++ +S G+ + EP S V LN++L+Q RA
Sbjct: 180 AVQQQIITQREGRFVIPVKAPQKDAIPGIVHDASTTGATVYVEPHSIVVLNNQLRQIQRA 239
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
T+AE + +LTE++ + ++EK+L + +D+ A+A YS P P D
Sbjct: 240 EQTEAEA-IRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGD- 297
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+SE TI L + HPLL+ W+ E+
Sbjct: 298 --------------TSE---TINLRQLRHPLLI----------WQQEYEQGPEV------ 324
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VPIDI I + RV+ ITGPNTGGKT+ LKT+
Sbjct: 325 -----------------------------VPIDITINPQIRVVAITGPNTGGKTVTLKTI 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII----- 484
GLA +MAK GL I + E ++PWF V ADIGDEQS+ QSLSTFSGH+++I I+
Sbjct: 356 GLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQAIGE 415
Query: 485 ---------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 535
S SLVLLDEIGAGT+P EGTAL ++LL+ FA+ + LT+ATTH G+L
Sbjct: 416 PMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADL-TRLTVATTHFGDL 474
Query: 536 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 595
K LKY + FENA +EFD+ L+PTY++LWG+PGRS+A+ IAERLGL +V+ A G
Sbjct: 475 KALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGSYVG 534
Query: 596 AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKV 655
++N+VI +E + Q A L + LH L E S + R+
Sbjct: 535 GGDEDVNQVIEGLEAQRRQQETKAIAASQLLQETERLHGEL-------AERAISLQERE- 586
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLT 715
R L Q++ + QA++ + K ++L+ + + K +
Sbjct: 587 ----------RQLKQAQEQEIKETLLQAKAEIAKVIRRLQQGKATAADAQKATARLDAIA 636
Query: 716 SNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPS 775
N+ P+ ++ V +SP +P VGD + + G+ ++
Sbjct: 637 ENY---------LPSRQATPV-----RSPNF----MPKVGDRIRIPRIGQTAEILSGPDD 678
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
++ V+ G MK + +I
Sbjct: 679 NNQLTVRFGIMKMTVGLGEI 698
>gi|307152450|ref|YP_003887834.1| MutS2 family protein [Cyanothece sp. PCC 7822]
gi|306982678|gb|ADN14559.1| MutS2 family protein [Cyanothece sp. PCC 7822]
Length = 801
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 251/804 (31%), Positives = 381/804 (47%), Gaps = 181/804 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A + + +T ++S +LL +T ++++ +
Sbjct: 5 ETLELLEWHRLCQHLSTFAATKLG--AIAAEYMKLPETQEESSQLLAQTEEVYDLEQRLN 62
Query: 112 CSLDLTGV----------DLSLVKSA------------IREVRRASPLRPNEALAV---- 145
+L G+ DL V S +R +RR + E + V
Sbjct: 63 TALSFEGITDIGDALERSDLGGVLSGKELLSIATTLAGVRRLRRL--IEEQEKIPVLKTL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLY-QLMDMLIRNEN- 192
VA ++ ++ + I+ED ++ R P + + +Y +L D++ R
Sbjct: 121 VANVRTYPEIEQEIHRCIEEDGEVSDRASPRLREIRGQMKVVRERIYRKLQDIMQRQSGA 180
Query: 193 -NESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
ES+ ++ R + A Q G++ SS G+ IEP S V L ++L+Q
Sbjct: 181 MQESV---ITQRGDRFVLPVKAPQKDQVPGIIHDSSSTGATLYIEPSSVVELGNQLRQYH 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
S EE +L L+ K+ +++E +L LD+ AR+ YS G P P
Sbjct: 238 RSEQIEEETILRGLSAKVAEVKEDLEDLLAAATILDLAVARSRYSWWLKGNPPRFIEP-- 295
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRR 366
HE +T L + HPLL+ QQH+Q +
Sbjct: 296 ------HEHIT-------------LRQLRHPLLIWQQQHEQGPEV--------------- 321
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
VPI++ + K RV+ ITGPNTGGKT+ L
Sbjct: 322 --------------------------------VPINVQVDPKIRVVAITGPNTGGKTVTL 349
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG----- 481
KTVGLA +MAK+G+ I + ++PWF+ + ADIGDEQSL QSLSTFSGH+++I
Sbjct: 350 KTVGLAALMAKAGIFIPAKVPVELPWFEQILADIGDEQSLQQSLSTFSGHIRRIIRIIEA 409
Query: 482 -NIISQ---STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
N S+ + S SLVLLDE+GAGT+P EG+AL SLL+ AE+ LTIATTH+GELK
Sbjct: 410 LNPTSEAPTTASSSLVLLDEVGAGTDPAEGSALATSLLKYLAEAAG-LTIATTHYGELKA 468
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
LKY ++ FENA +EF++ L PTY++LWG+PGRS+A+ IA RLGL ++++AR G
Sbjct: 469 LKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRLGLRPDIIEDARTRVGGF 528
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH------KNLLRTRRKILEHCASQR 651
S +IN VI +E+ + + E EA L + + N L+ R K L+ Q
Sbjct: 529 SEDINRVIAGLEQQRREQEEKAKEATQLLKQTERFYAEVSQKANALQQREKDLKQQQEQ- 587
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
++QK AA + V + QQ P+A A+ A+++L K+ + Q
Sbjct: 588 --EIQKAIIAAKAEIAQVIRQLQQGTPTAQNAQ------------KATEAL--GKIAEKQ 631
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
+ KQ ++ R P VG+ V + S G+ V+
Sbjct: 632 -------------------------LPKQKQPVKIYR---PQVGEKVRIPSLGQTAEVLN 663
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE+ V+ G MK + F DI
Sbjct: 664 ILEESEEVSVRFGIMKMTVPFRDI 687
>gi|427721207|ref|YP_007069201.1| MutS2 protein [Calothrix sp. PCC 7507]
gi|427353643|gb|AFY36367.1| MutS2 protein [Calothrix sp. PCC 7507]
Length = 828
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 245/828 (29%), Positives = 363/828 (43%), Gaps = 198/828 (23%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A ++ I + +S++LL++T +++ +
Sbjct: 5 ETLELLEWHRLCQHLSTFAATKLG--AIASRHLQIPDSQAESIQLLEQTKEVYQLENRLT 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
SL G+ + A+ L +E LA+ L + +LR I D I
Sbjct: 63 TSLSFDGI--QDIGDALERAELQGILTGDELLAIATTLAGAR----NLRRVIDNQLDCPI 116
Query: 172 --------RFMP-LTQMLYQLMD--------------------MLIRNENNESLFLEVSS 202
R P L Q +++ +D +R++ + L + +
Sbjct: 117 LTALVAELRTYPELEQEIHRCIDERGQVTDRASQKLGEIRTDLRRLRSQITQKLQNILQA 176
Query: 203 IHG------------RLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
G R I A Q + G++ S+SG +EP S VP+ ++L+Q
Sbjct: 177 KSGAVQEQLITQRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPNSIVPMGNQLRQV 236
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
EE + ALTE++ ++E++L + LD+ ARA YS G P Q
Sbjct: 237 IRKEQAEEEAIRRALTEQVAAVKPDLERLLAIVTTLDLATARARYSFWLGANPPRFIHRQ 296
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRR 365
D + I L HPLL+ QQH+Q
Sbjct: 297 DQE-------------------IITLRHLRHPLLVWQQQHEQ------------------ 319
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTI 424
PV P+D+ I+ RV+ ITGPNTGGKT+
Sbjct: 320 ------------------------------GQPVVPVDLLISPHIRVVTITGPNTGGKTV 349
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GLA +MAK GL I + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 350 TLKTLGLAALMAKVGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRIL 409
Query: 485 SQ------------------------------------STSQS-LVLLDEIGAGTNPLEG 507
+ ST S LVLLDE+GAGT+P+EG
Sbjct: 410 NALGHGEEAALRLRSGQGSREQGAGEQNLELRTPDSVLSTQHSALVLLDEVGAGTDPVEG 469
Query: 508 TALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGV 567
+AL ++LL+ A+ L IATTH GELK LKY ++ FENA +EFDE L PTY++LWG+
Sbjct: 470 SALAIALLQYLADHAQL-AIATTHFGELKALKYEDERFENASVEFDETTLSPTYRLLWGI 528
Query: 568 PGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM 627
PGRS+A+ IA RLGL V+++A+ G A+ E+N+VI +E + + EA++ L
Sbjct: 529 PGRSNALTIALRLGLKPEVIEHAKTQVGEATDEVNQVIAGLEAQRRRQETKATEAQNVLQ 588
Query: 628 LSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
+ L+K + K + + + R+ + QQ A + V
Sbjct: 589 QAERLYKEV---------------SAKAEALQEREKALRASQEVAVQQAIAQAKTEIAQV 633
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
+R QQ P+A + T + L QQ P
Sbjct: 634 IRRLQQGTPTAQDAQQAT------NALNQIAQQYQPAPPPKPKAGF-------------- 673
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P VGD + +S FG+ V+ E V+ G MK + DI
Sbjct: 674 ---MPKVGDRIRISKFGQTAEVLTAPDEDGEFSVRFGIMKMTVTLEDI 718
>gi|428218654|ref|YP_007103119.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
gi|427990436|gb|AFY70691.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
Length = 750
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 314/594 (52%), Gaps = 80/594 (13%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G+ +EP + V N++L+Q E +L L+ ++ +++ ++L + ++
Sbjct: 212 SSTGMTVFVEPHAIVTANNQLRQLAKQEQAEIEIILRQLSGQVAEVGEDLWRLLAIVTEI 271
Query: 284 DVVNARATYSLSFGGTSPNI--FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLL 341
D+ ARA Y+L G +P F D + S SS+ + L
Sbjct: 272 DLAIARARYALWLGANAPTFINFAAPDAATDIESNQKESASQSSDVDQ-----------L 320
Query: 342 LQQHKQ---KTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHP 398
LQ +Q A + L ++ NA +L P+++ + L+ HP
Sbjct: 321 LQSESDDPGNSQLVEPGDRPATSSLLKKPASKINA--------DLPPAQLTLRGLK--HP 370
Query: 399 --------------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
VP+D+ IA + V+VITGPNTGGKT LKT GLA +MAKSG+ + +
Sbjct: 371 LLVWQQQHEQGREVVPVDVLIAPEISVVVITGPNTGGKTATLKTFGLAALMAKSGMFVPA 430
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++PWFD V ADIGDEQSL Q+LSTFSGH+K+IG I++ +T++SL+LLDE+GAGT+P
Sbjct: 431 REPVELPWFDLVLADIGDEQSLQQNLSTFSGHIKRIGRILTAATAESLILLDEVGAGTDP 490
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG+A+ +LLE A + + LT+ATTH GELKTLKY++ FENA +EFD+VKL PTY++
Sbjct: 491 TEGSAIAKALLEYLA-THACLTVATTHFGELKTLKYNHACFENAAVEFDDVKLAPTYRLQ 549
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
WG+PGRS+A+ IA RLG P +++ A+ G SAE+N VI ++E + + + + +A
Sbjct: 550 WGIPGRSNALAIAARLGFPAEILEQAQDHVGFGSAELNTVIADLEGQRRKHEDKLKQASK 609
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI--ARSLVHKSAQQLCPSAS- 681
L + +L+ + + K+ E + + R+ Q+I AI A+ + + ++L S
Sbjct: 610 LLAQTEHLYVEISKKAAKLKE--SERELRQNQEIEVTEAIKQAKKEIARVIRKLQKGDSP 667
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +R Q+L +H+ + Q P T S + K +
Sbjct: 668 EAVHFAERRVQEL--------------SKRHLPSQQPQ---------PKTQSQAQQKYV- 703
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
P VGD V V G+ V+ + +E+ V++G MK + DI
Sbjct: 704 ----------PKVGDRVRVPKLGQVVQVLSEPTNADELSVRLGQMKMTVALRDI 747
>gi|86609812|ref|YP_478574.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558354|gb|ABD03311.1| MutS2 family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 805
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 250/797 (31%), Positives = 367/797 (46%), Gaps = 185/797 (23%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLT-QLWSINQTYQDSLRLLDETNAAIEMQKHG 110
E+L +LEW +LC +++FA T LGR A L W Q+ DS L++T AI + +
Sbjct: 25 ETLELLEWPRLCQHLATFAATPLGRRACLELDPW---QSRADSEAYLEQTEEAIRLDRTQ 81
Query: 111 SCSLDLTG----------------------VDLSLVKSAIREVRR---ASPLRPNEALAV 145
+ L + G V ++ A R +RR P V
Sbjct: 82 AGGLSMAGIHNLLPALERAERGGILSGEELVQIATTLGAARRIRRLIDDHDHLPRLQTWV 141
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-------------------LTQMLYQ---- 182
L + E Q R ++E ++ P L Q++ Q
Sbjct: 142 STLRTYPELEQEIFRC-LEEHGEVRDSASPTLADLRQQQRRQRSQIQEQLQQLMSQYPQA 200
Query: 183 LMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPL 240
L D LI + L V + H L +G++ SS G+ +EP + V L
Sbjct: 201 LQDTLI-GQRQGRFVLMVKATHRDL----------IRGIVHDSSASGATLYVEPYAVVEL 249
Query: 241 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 300
+ ++ + + EE +L AL+ ++ ++E + ++ LDV AR YSL G
Sbjct: 250 GNRWRETQVQIQAEEERILAALSAQVAAVATDLEHLQGVMVGLDVALARGRYSLWLEGNR 309
Query: 301 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 360
P VS+ R L +A HPLLL W+ +A
Sbjct: 310 PQF------------------VSAGLR-----LRQAKHPLLL----------WQSRAAA- 335
Query: 361 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 420
PSE Q SA+ VPID +A RV+VITGPNTG
Sbjct: 336 ------------------------PSEGQGSAV-----VPIDFTLADSIRVVVITGPNTG 366
Query: 421 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 480
GKT+ LKT+GL V+MAK+G+ + + + ++PWFD V+ADIGDEQSL Q+LSTFSGH+++I
Sbjct: 367 GKTVALKTLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQNLSTFSGHIRRI 426
Query: 481 GNIIS--QSTSQ-SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
I+ QS + +LVLLDE+GAGT+P EG AL LLE +E +LLT+ATTH+GELK
Sbjct: 427 SRIVQALQSAPEPALVLLDEVGAGTDPTEGAALAAGLLEYLSER-ALLTLATTHYGELKA 485
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGA 596
LKY + FENA +EFDEV L PTY++LWG+PGRS+A+ IA+RL L P I+ + R L G
Sbjct: 486 LKYQHPCFENASVEFDEVTLAPTYRLLWGIPGRSNALAIAQRLQLDPEILRRAQRHLQG- 544
Query: 597 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ 656
++++ VI +E + Q E + +L++ + + R+I E A ++ Q
Sbjct: 545 -ESQVDRVIAGLEAQRAQLEERAAQVGSLHRELESLYQQMQQRSRQIAEREARLEQKQNQ 603
Query: 657 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 716
++ Q L +A Q + +R QQ G++ +T+
Sbjct: 604 EL---------------QALLAAARQEVAAAIRRLQQ--------------GEDPQRITA 634
Query: 717 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSK 776
Q P P V +P VGD V + G+ G VI +E
Sbjct: 635 ELAQIQQRYSPPP--------------PPVDMEFVPEVGDRVRLRGLGQTGEVIAIE--G 678
Query: 777 EEIVVQVGNMKWIMKFT 793
+ VV+ G I+KFT
Sbjct: 679 DVYVVRSG----ILKFT 691
>gi|427417145|ref|ZP_18907328.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
gi|425759858|gb|EKV00711.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
Length = 818
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 242/804 (30%), Positives = 365/804 (45%), Gaps = 165/804 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC ++FA T LG A + I + +S +LL +T A +++
Sbjct: 5 ETLDLLEWPRLCQQWATFAATKLG--ALAARHGRIPEHQSESEQLLAQTREAYRLEE--K 60
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEAL----AV 145
L+ GV+ ++ + R++RR + EA A+
Sbjct: 61 SPLNFRGVEDMGDALERAKRQAILSGDELLHIATTLAGARQLRRTIDAQEEEAFPVLQAL 120
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP--------LTQMLYQLMDMLIRNENNESLF 197
V L+ L+ + I + + R P L QL L R S
Sbjct: 121 VGQLRTYPELEKEIHHCIDDRGKVTDRANPKLAGIRKNLKNTHDQLHAKLQRIMQRHSGV 180
Query: 198 LE---VSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASV 251
L+ ++ GR I A Q S G++ +S+SG IEP V + L+Q
Sbjct: 181 LQETLITQRAGRFVIPVKAPQKESIPGIVHDVSTSGATLYIEPQGVVEFGNRLRQLERQE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
T+ EE V LTE++ +++E+++ + LD+ ARA YSL P
Sbjct: 241 TREEELVRQRLTEQVAAVSEDLEQLMAIVTTLDLATARARYSLWLEANPPRF-------- 292
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGG 371
SE L + HP+L+ Q + +
Sbjct: 293 -------------SEANERTVLRQLRHPILVWQQRHE----------------------- 316
Query: 372 NAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
E VP DI + RV+ ITGPNTGGKT+ LKT+GL
Sbjct: 317 ----------------------EGPTVVPTDITMRPDIRVVAITGPNTGGKTVTLKTLGL 354
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII------- 484
A +MAK GL + + E ++PWFD V ADIGDEQS+ QSLSTFSGH+++IG I+
Sbjct: 355 AALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIRRIGRILDAIGADG 414
Query: 485 -----------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHG 533
+ + SLVLLDE+GAGT+P EG+AL +SLL+ A + LT+ATTH G
Sbjct: 415 VDDAGNTASMGTAHPTNSLVLLDEVGAGTDPTEGSALAISLLQHLANH-TRLTVATTHFG 473
Query: 534 ELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQL 593
ELK LKY ++ FENA +EFD+V L PTY++LWG+PGRS+A+ IA RLGL V+ A+
Sbjct: 474 ELKALKYQDERFENASVEFDDVSLSPTYRLLWGIPGRSNALTIARRLGLNPNVIDTAQTY 533
Query: 594 YGAASA-EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRF 652
G + ++N+VI +E + + + +A + + L ++ R I E SQ+
Sbjct: 534 VGVSKQDDVNQVIAGLEAQRKRQEDQAKQAAGIVAQAEALKTDIERKAAAIKEWERSQKL 593
Query: 653 RKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQH 712
+ + I A A A++ + +QL Q+ P+A + T+
Sbjct: 594 EQEKAIQAAVAEAKAEIATVIRQL---------------QKGNPTAQAAQRATE------ 632
Query: 713 VLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKV 772
++ QQ V K HPA V+ D K P +G+ V + G + +
Sbjct: 633 LVEDIAQQQQVPKGNHPA---KKVITDYK----------PKLGEKVRLIGLGGQTAEVVG 679
Query: 773 EP-SKEEIVVQVGNMKWIMKFTDI 795
EP S ++ V+ G MK I+ +DI
Sbjct: 680 EPDSDGKVAVRFGLMKTIVDLSDI 703
>gi|356521351|ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
Length = 902
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 259/829 (31%), Positives = 399/829 (48%), Gaps = 127/829 (15%)
Query: 33 FCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQD 92
FCS +S+ ++ E+L+ LEW +C +S+F TS+G A L I +T +D
Sbjct: 24 FCSNPNSPESNSLQA----ETLKTLEWGSVCKQLSAFTSTSMGSAAALNARLPIGRTRRD 79
Query: 93 SLRLLDETNAAIEMQKHGSCSLDLTGV-------------------DLSLVK-------- 125
S RLLD+T+AA + + LD +GV +L V+
Sbjct: 80 SQRLLDQTSAARLVAE----PLDFSGVHDLTEILGVATSGHLLTIRELCTVRHTLAAARE 135
Query: 126 --SAIREVRRASPLRPNEALAVVALLQ---FSETLQLSLRAAIKEDADLYIRFMPLTQML 180
A++ V AS P L ++ +LQ F L+ + I D L I ++ L
Sbjct: 136 LFDALKRVASASN-HPQRYLPLLDILQNCNFQVGLERKIEFCI--DCKLSIILDRASEDL 192
Query: 181 YQLMDMLIRN-ENNESLFLEVSSI---------------HGRLC--IRTGADQLSFKGLL 222
+ RN E +SL EVSS R+C IR L G++
Sbjct: 193 EIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVV 252
Query: 223 L--SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNG 279
L SSSG +EP A+ LN+ L+ +S KAEE V+L+ L ++ +I +L+
Sbjct: 253 LNVSSSGATYFMEPKDAIDLNN-LEVRLSSSEKAEESVILSMLASEIANSESDINHLLDK 311
Query: 280 IIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHP 339
I+++D+ ARA Y+ G P L R + + V+ + + T+ + HP
Sbjct: 312 ILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDIVGIRHP 371
Query: 340 LLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV 399
LLL+ LE+ + L L GNAA G + ++ M + PV
Sbjct: 372 LLLE----------SSLENISDNL---TLRSGNAAEFGNGNGTMASKYMPQGISDF--PV 416
Query: 400 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFAD 459
P+D I TRV+VI+GPNTGGKT +KT+GLA +M+K+G+H+ + + K+PWFD + AD
Sbjct: 417 PVDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILAD 476
Query: 460 IGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA 519
IGD QSL Q+LSTFSGH+ +I I+ +++QSLVL+DEIG GT+P EG AL S+L+
Sbjct: 477 IGDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLK 536
Query: 520 ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAER 579
+ + L + TTH+ +L ++K + F+NA MEF L+PTY+ILWG G S+A++IA+
Sbjct: 537 DRVN-LAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQS 595
Query: 580 LGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRT 639
+G ++ A++ +E+FK E E R L S +N L+
Sbjct: 596 IGFDRNIIDRAQKW--------------VEKFKP---EQQQERRGMLYQSLQEERNQLKA 638
Query: 640 RRKILEHCASQR------FRKVQ-KISDAAAIARSLVHKSAQQ----LCPSASQARSLVH 688
+ E AS + ++Q + D L+ K QQ L + SQ +++
Sbjct: 639 Q---AEKAASVHAEIMSVYNEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQ 695
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
K +QLR S L N + S ++ K PA + I ++ R
Sbjct: 696 KFEKQLRISGRDQL-------NYLIRESESAIASIVKAHTPADSFP-----INEADRALY 743
Query: 749 TELPNVGDLVHVSSFGKK-GTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
T P +G+ VHV G K TV++ I+VQ G +K +K ++I+
Sbjct: 744 T--PQIGEQVHVKGLGGKLATVVESPGDDGTIMVQYGKVKVRVKKSNII 790
>gi|356521349|ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
Length = 914
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 259/829 (31%), Positives = 399/829 (48%), Gaps = 127/829 (15%)
Query: 33 FCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQD 92
FCS +S+ ++ E+L+ LEW +C +S+F TS+G A L I +T +D
Sbjct: 24 FCSNPNSPESNSLQA----ETLKTLEWGSVCKQLSAFTSTSMGSAAALNARLPIGRTRRD 79
Query: 93 SLRLLDETNAAIEMQKHGSCSLDLTGV-------------------DLSLVK-------- 125
S RLLD+T+AA + + LD +GV +L V+
Sbjct: 80 SQRLLDQTSAARLVAE----PLDFSGVHDLTEILGVATSGHLLTIRELCTVRHTLAAARE 135
Query: 126 --SAIREVRRASPLRPNEALAVVALLQ---FSETLQLSLRAAIKEDADLYIRFMPLTQML 180
A++ V AS P L ++ +LQ F L+ + I D L I ++ L
Sbjct: 136 LFDALKRVASASN-HPQRYLPLLDILQNCNFQVGLERKIEFCI--DCKLSIILDRASEDL 192
Query: 181 YQLMDMLIRN-ENNESLFLEVSSI---------------HGRLC--IRTGADQLSFKGLL 222
+ RN E +SL EVSS R+C IR L G++
Sbjct: 193 EIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVV 252
Query: 223 L--SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNG 279
L SSSG +EP A+ LN+ L+ +S KAEE V+L+ L ++ +I +L+
Sbjct: 253 LNVSSSGATYFMEPKDAIDLNN-LEVRLSSSEKAEESVILSMLASEIANSESDINHLLDK 311
Query: 280 IIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHP 339
I+++D+ ARA Y+ G P L R + + V+ + + T+ + HP
Sbjct: 312 ILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDIVGIRHP 371
Query: 340 LLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV 399
LLL+ LE+ + L L GNAA G + ++ M + PV
Sbjct: 372 LLLE----------SSLENISDNL---TLRSGNAAEFGNGNGTMASKYMPQGISDF--PV 416
Query: 400 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFAD 459
P+D I TRV+VI+GPNTGGKT +KT+GLA +M+K+G+H+ + + K+PWFD + AD
Sbjct: 417 PVDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILAD 476
Query: 460 IGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA 519
IGD QSL Q+LSTFSGH+ +I I+ +++QSLVL+DEIG GT+P EG AL S+L+
Sbjct: 477 IGDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLK 536
Query: 520 ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAER 579
+ + L + TTH+ +L ++K + F+NA MEF L+PTY+ILWG G S+A++IA+
Sbjct: 537 DRVN-LAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQS 595
Query: 580 LGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRT 639
+G ++ A++ +E+FK E E R L S +N L+
Sbjct: 596 IGFDRNIIDRAQKW--------------VEKFKP---EQQQERRGMLYQSLQEERNQLKA 638
Query: 640 RRKILEHCASQR------FRKVQ-KISDAAAIARSLVHKSAQQ----LCPSASQARSLVH 688
+ E AS + ++Q + D L+ K QQ L + SQ +++
Sbjct: 639 Q---AEKAASVHAEIMSVYNEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQ 695
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
K +QLR S L N + S ++ K PA + I ++ R
Sbjct: 696 KFEKQLRISGRDQL-------NYLIRESESAIASIVKAHTPADSFP-----INEADRALY 743
Query: 749 TELPNVGDLVHVSSFGKK-GTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
T P +G+ VHV G K TV++ I+VQ G +K +K ++I+
Sbjct: 744 T--PQIGEQVHVKGLGGKLATVVESPGDDGTIMVQYGKVKVRVKKSNII 790
>gi|428776360|ref|YP_007168147.1| MutS2 family protein [Halothece sp. PCC 7418]
gi|428690639|gb|AFZ43933.1| MutS2 family protein [Halothece sp. PCC 7418]
Length = 812
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 237/801 (29%), Positives = 372/801 (46%), Gaps = 162/801 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +L +++F T LG A + I + SL LL ET ++++ +
Sbjct: 5 ETLDLLEWRRLGEHLATFTSTKLG--AYAARHLPIPDNRETSLTLLTETKEVYALEENLT 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRA-SPLRPNEALA-VVA 147
G+ ++ + +R +RR L + L +++
Sbjct: 63 SGWKFDGIYDFSSALERAEYKGILEGETLLQIATTLAGMRRLRRVIDELEDSPRLKELIS 122
Query: 148 LLQFSETLQLSLRAAIKEDADLYIRFMP----LTQMLYQLMDMLIRNENN----ESLFLE 199
++ L+ + + + + R P + Q L + D + + N +S ++
Sbjct: 123 QIRTYPELEKEINRCLDDKGKVTERASPKLGEIRQNLKERRDRIYQKLQNIMQQQSGAIQ 182
Query: 200 VSSIHGR-----LCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
I R L ++ G + S +G++ SSG G+ IEP S V L ++ +Q
Sbjct: 183 EPVITQRGERFVLPVKAGHKE-SIRGIVHDSSGSGATLYIEPNSIVELGNQQRQYLRQEK 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ EE +L ALTE++ +++E +L +LD+ AR+ YSL P S
Sbjct: 242 REEERILQALTEEVAEVKEDLELLLAIATKLDLATARSRYSLWLEANPPQFV------ES 295
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
+ EP+T L + HPLL+ QH
Sbjct: 296 NSREPIT-------------LRRLRHPLLVWQHHH------------------------- 317
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
E+ T + VPID+ I +TRV+ ITGPNTGGKT+ LKTVGLA
Sbjct: 318 -----EQGTPV---------------VPIDVQIDPETRVVAITGPNTGGKTVTLKTVGLA 357
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII-------- 484
+MAK GL I + E ++PWF+ V ADIGDEQS+ QSLSTFSGH+++I II
Sbjct: 358 ALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRITRIIDALHPSSI 417
Query: 485 ----------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 534
++ SLVLLDE+GAGT+P EG+A+ ++LL+ A + LTIATTH+GE
Sbjct: 418 DHPEANEDADGETIKLSLVLLDEVGAGTDPAEGSAIAIALLQYLA-ARVRLTIATTHYGE 476
Query: 535 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 594
LK LKY ++ FENA +EFD+ L PTY++LWG+PGRS+A+ IA RLGL ++ A+
Sbjct: 477 LKALKYQDERFENASVEFDDETLSPTYRLLWGIPGRSNALTIARRLGLDPEILDLAKNKM 536
Query: 595 GAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRK 654
G S +IN+VI +E+ + + E EAR L + ++ + +R K LE
Sbjct: 537 GGYSEDINQVISGLEKQRREQEEKAREARQLLEQAEKFYQE-VSSRAKALE--------- 586
Query: 655 VQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVL 714
+ A + RS Q + + S+AR + + +QL+ K G+
Sbjct: 587 ----AREADLKRS----QEQAVNEAVSEARQEIAQVIKQLQ-------QGQKTGQAAQKA 631
Query: 715 TSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEP 774
T+ + P T P+ K P VG+ V + F + G V+
Sbjct: 632 TATVNEIAGRHRPQPET------------PKPKPQYQPQVGEQVRLPKFNQTGEVLTAPN 679
Query: 775 SKEEIVVQVGNMKWIMKFTDI 795
++ ++ ++ G MK + DI
Sbjct: 680 AEGKLTIRFGLMKMTVSLADI 700
>gi|427733731|ref|YP_007053275.1| MutS2 family protein [Rivularia sp. PCC 7116]
gi|427368772|gb|AFY52728.1| MutS2 family protein [Rivularia sp. PCC 7116]
Length = 817
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 245/814 (30%), Positives = 360/814 (44%), Gaps = 183/814 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A + +I + +S LL +T E++
Sbjct: 5 ETLELLEWSRLCQHLSTFAATKLG--AIAARNIAIPDSQVESEYLLAQTKEVYELENRLD 62
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEAL--AVVA 147
+ G+ ++ + IR +RR P+ + +VA
Sbjct: 63 NGISFEGIQDFGDSLERAELKGILAGDELLAIATTLAGIRNLRRLIDNHPDLEILNELVA 122
Query: 148 LLQFSETLQLSLRAAIKEDADLYIR----FMPLTQMLYQLMDMLIRNENN---------- 193
L+ L+ + I E + R + L Q + R N
Sbjct: 123 DLRTYPELEKEIHRCIDERGQVTDRASEKLGDIRNSLRQSRSQITRKLQNIIQVKANALQ 182
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARAS 250
E++ + S R I A Q + G++ S+SG +EP S VP+ ++L+Q
Sbjct: 183 ETIITQRSD---RFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPNSIVPMGNQLRQLLRR 239
Query: 251 VTKAEEDVLLALTEKM-QVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
EE + L+E++ +V LD +EK+L LD+ A+A YS P P
Sbjct: 240 EQVEEEAIRRKLSEQVAEVKLD-LEKLLAVATTLDLATAKARYSFWLKANPPRFIQPS-- 296
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRK 367
E I L + HPLL+ QQH+Q
Sbjct: 297 ------------------EENITLRELRHPLLVWQQQHEQ-------------------- 318
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICL 426
H V P+++ I RV+ ITGPNTGGKT+ L
Sbjct: 319 ----------------------------GHEVIPVNLVIHPYIRVVTITGPNTGGKTVTL 350
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS- 485
KT+G A +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 351 KTLGFATLMAKIGLFVPAREPVELPWFDRVLADIGDEQSLEQSLSTFSGHIRRISRILDA 410
Query: 486 ------------------------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
T SLVLLDE+GAGT+P+EG+AL ++LL A++
Sbjct: 411 VSHVKVEEAQTAEKAEQEENTSLPSPTPSSLVLLDEVGAGTDPVEGSALAIALLRYLADN 470
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S+LTIATTH GELK LKY ++ FENA +EFDE L PTY++LWG+PGRS+A+ IA RLG
Sbjct: 471 -SMLTIATTHFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLG 529
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L VV+ A+ G A+ E+N+VI +E + + E +A+ L + +K +
Sbjct: 530 LKPEVVEKAKDEMGGATDEVNQVIAGLEAQRRRQEEKATQAQDLLQQAERFYKEVSAKAA 589
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
+ E S R Q+I + QQ SA + V KR QQ P+A +
Sbjct: 590 DLEEREKS--LRASQEI-------------AVQQAIASAKGEIAAVIKRLQQGNPTAQDA 634
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
T + + L F + K E P+ K +P VG+ + +
Sbjct: 635 KKAT---DSINKLADRF----IPKAE----------------PKPKAGFMPKVGERIRIP 671
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ V+ E V+ G MK +K D+
Sbjct: 672 KLGQTAEVLTAPDEDGEFNVRFGIMKMTVKLKDV 705
>gi|434391179|ref|YP_007126126.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
gi|428263020|gb|AFZ28966.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
Length = 804
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 371/794 (46%), Gaps = 161/794 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKH-- 109
E+L +LEW +LC +S+FA T LG AT + I Q+ + S LL +T A +++
Sbjct: 5 ETLELLEWSRLCQHLSTFAATKLG--ATAARNLQIPQSQKQSEALLAQTQEAYQLENSLT 62
Query: 110 GSCSLD-----------------LTGVDLSLVKSAI---REVRRASPLRPNEAL--AVVA 147
G S D LTG +L + + + R++RRA +P+ + A+V
Sbjct: 63 GGLSFDGIQDIGDALTRVQRQGILTGEELLAIATTLAGTRQLRRAIDNQPDVPVLSALVE 122
Query: 148 LLQFSETLQLSLRAAIKEDADLYIRFMPL------------TQMLYQLMDMLIRNEN--N 193
++ ++ + I E + R +Q+ +L ++L R N
Sbjct: 123 DIRTYPEIEQEIHRCIDERGQVSDRASTTLSNIRSSLRQIRSQITQKLQNILQRQANAVQ 182
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARAS 250
E L ++ R I A Q + G++ S+SG +EP S VPL ++L+Q
Sbjct: 183 EQL---ITKRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPNSVVPLGNQLRQLTVK 239
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
E + L+E++ ++E +L+ LD+ ARA YS P
Sbjct: 240 EQAEETAIRRQLSEQIAAVTPDLEHLLSVATILDLACARARYSYWLKANPPRF------- 292
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQ--HKQKTQQAWKDLESANTELRRRKL 368
+ E E TI L + +HPLL+ Q H+Q
Sbjct: 293 -----------IQRGEGE-TITLRQLHHPLLVWQFAHEQ--------------------- 319
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
G A VP+D+ I + RV+ ITGPNTGGKT+ LKT
Sbjct: 320 --GTAV------------------------VPVDLVIKPQIRVVTITGPNTGGKTVTLKT 353
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ-S 487
+GLA +MAK GL + + E ++PWFD V ADIGDEQSL QSLSTFSGH+++I II S
Sbjct: 354 LGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRIIDALS 413
Query: 488 TSQ------SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
+Q SLVLLDE+GAGT+P EG+AL ++LL+ A+ + L+IATTH GELK LKY
Sbjct: 414 NTQALTPHSSLVLLDEVGAGTDPAEGSALAIALLQYLADH-TQLSIATTHFGELKALKYQ 472
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
++ FENA +EFDE L PTY++LWG+PGRS+A+ IA RLGL VV+ A+ G A+ ++
Sbjct: 473 DERFENASVEFDEESLSPTYRLLWGIPGRSNALTIARRLGLNAEVVEQAKTKIGGATEDV 532
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
N+VI +E + EA L + L+ + + ++ E A R ++ Q I A
Sbjct: 533 NQVIAGLEAQRRLQETKAAEAEQLLQQVQRLYTEVSQKAAQLQEREAHLRQQQEQSIQQA 592
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
A+S + + ++L Q S + AQQ A+ +L T++ KN
Sbjct: 593 LVQAKSEIAQVIRRL-----QQGSTTAQDAQQ----ATNAL--TQIAKN----------- 630
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
H Q VGD + + + VI E+ V
Sbjct: 631 ------HLPPPPKPKPGFKPQ-----------VGDRIRIPRLEQTAEVISAPDEDGELSV 673
Query: 782 QVGNMKWIMKFTDI 795
+ G MK +K DI
Sbjct: 674 RFGIMKMNVKLEDI 687
>gi|172036803|ref|YP_001803304.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. ATCC 51142]
gi|354554613|ref|ZP_08973917.1| MutS2 protein [Cyanothece sp. ATCC 51472]
gi|171698257|gb|ACB51238.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353553422|gb|EHC22814.1| MutS2 protein [Cyanothece sp. ATCC 51472]
Length = 817
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 230/810 (28%), Positives = 372/810 (45%), Gaps = 171/810 (21%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +++FA T +G AT + I + Q+S LL +T +++
Sbjct: 2 IYKETLNLLEWHRLCQQLATFAATKMG--ATAARNLPIPTSLQESKELLAQTQEIYGLEQ 59
Query: 109 H-------------------GSCSLDLTGVDLSLVKSAIREVRRASPLRPN-EALAV--- 145
+ + +L+G +L + + + +RR + + E L V
Sbjct: 60 NLEIKWTFEGITDVGDSLTRATLKGNLSGQELLNIATTLAGMRRLRRIIDDCEDLPVLTD 119
Query: 146 -VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENN 193
VA ++ L+ ++ I E + R P + +Y+ + +++ +
Sbjct: 120 LVADIRTYPELEKAIHHCIDEAGKVADRASPKLGEIRHNLKEIRDRIYEKLQNIMQQKGG 179
Query: 194 ESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARAS 250
++ R + A Q G++ +SG G IEP S V + ++ +Q
Sbjct: 180 AIQETVITQRGDRFVLPVKAGQKEQIPGIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQ 239
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ EE +L +LTE++ +++E +L LD+ ARA YS GG +P
Sbjct: 240 EEREEEAILRSLTEQVAEVAEDLEYLLAIATVLDLATARARYSFWLGGNAPRFI------ 293
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYG 370
E TI L + +HPLL+ W+
Sbjct: 294 ---------------EDTETITLRQLHHPLLV----------WQ---------------- 312
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
E+ SP VPI++ I RV+ ITGPNTGGKT+ LKTVG
Sbjct: 313 -------ERHEQGSPV------------VPINVQINPDIRVIAITGPNTGGKTVTLKTVG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS----- 485
LA +MAK GL + + E ++PWF+ + ADIGDEQS+ Q+LSTFSGH+++I I+
Sbjct: 354 LAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSIEQNLSTFSGHIRRIVRILEALEGT 413
Query: 486 --------------------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLL 525
+ SL+LLDE+GAGT+P EG+AL ++LL A+ L
Sbjct: 414 GDPPLTNGGGEQKTVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLADHAQ-L 472
Query: 526 TIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGI 585
TIATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A++IA+RLGL
Sbjct: 473 TIATTHYGELKALKYEDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALSIAQRLGLDVD 532
Query: 586 VVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILE 645
++ A+ G S ++N+VI +E + + E EA+ L + + + + +
Sbjct: 533 IIDEAKTRIGGLSQDVNDVIAGLEAQRREQEEKAQEAQKLLQETEKFYTEVSEKATALQQ 592
Query: 646 HCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCT 705
+ + Q++ A A A+ + A RSL Q+ + S+ ++ T
Sbjct: 593 REQDLKRYQEQEVQKAIAEAKEEI----------AQVIRSL-----QKGKKSSQKAQQAT 637
Query: 706 KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGK 765
+ +N Q + K K P+V P VG+ + +S+ G+
Sbjct: 638 EA-------ITNISQRQLPK---------------KAKPKVSYQ--PQVGEKIRLSNLGQ 673
Query: 766 KGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+ V P EE++V+ G MK + F DI
Sbjct: 674 TAEVLAVSPEDEEVMVRFGLMKMTVSFKDI 703
>gi|86607201|ref|YP_475964.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-3-3Ab]
gi|86555743|gb|ABD00701.1| MutS2 family protein [Synechococcus sp. JA-3-3Ab]
Length = 799
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 325/657 (49%), Gaps = 130/657 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLT-QLWSINQTYQDSLRLLDETNAAIEMQKHG 110
E+L +LEW +LC ++SFA T LGR A L W ++ +S LD+T AI +
Sbjct: 23 ETLELLEWPRLCQHLASFAATPLGRRACLELDPW---RSRAESEVCLDQTEEAIRLDCSQ 79
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLS--LRAAIKEDAD 168
+ L G+ L A+ R L E L+Q + TL + LR I D
Sbjct: 80 PGGISLDGIHNLL--PALERAERGGILSGEE------LVQIATTLGAARRLRRLIDADER 131
Query: 169 L--------YIRFMP-LTQMLYQLMDML--IRNENNESL-----------------FLEV 200
L +R P L Q +++ +D +R+ + +L +V
Sbjct: 132 LPRLQEWVSNLRTYPELEQEIFRCLDEHGEVRDSASAALADLRRQHRQYRSQIQERLQQV 191
Query: 201 SSIH-------------GRLCIRTGADQLSF-KGLLLSSSGIGSV--IEPLSAVPLNDEL 244
S H GR + A +G++ SS G+ +EP + V L + L
Sbjct: 192 MSQHPQALQDTLIGQRQGRFVLMVKATHRDLIRGIVHDSSASGATLYVEPYAVVELGNRL 251
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
++ +A + EE +L AL+ ++ +++E + ++ L+V ARA YSL GG P F
Sbjct: 252 RETQAQIQAEEERILAALSAQVGSVAEDLEHLQAVMVGLEVALARARYSLWLGGNRPQ-F 310
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
+P ++ L +A HPLLL Q ++ E E+
Sbjct: 311 VPAGLR----------------------LRQARHPLLLWQSRE---------EGKGPEV- 338
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
+PID ++ R +VITGPNTGGKT+
Sbjct: 339 ----------------------------------IPIDFTLSESIRAVVITGPNTGGKTV 364
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GL V+MAK+G+ + + + ++PWFD V+ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 365 ALKTLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQSLSTFSGHIRRISRIV 424
Query: 485 SQSTSQ---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
S+ +LVLLDE+GAGT+P EG AL LLE AE +LLT+ATTH+GELK LKY
Sbjct: 425 QALQSEPAPALVLLDEVGAGTDPSEGAALAAGLLEYLAEK-ALLTLATTHYGELKALKYQ 483
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
+ FENA +EFDE L PTY++LWG+PGRS+A+ IA RL L +++ A+Q + +++
Sbjct: 484 HPGFENASVEFDEATLAPTYRLLWGIPGRSNALAIARRLHLEPEILRRAQQ-HLQGESQV 542
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 658
++VI +E + Q E + L++ + + R++ E A +R+ Q +
Sbjct: 543 DKVIAGLEAQRAQLEERAAQVGSLHQELETLYRQMQQRSRQMAEREAQLEYRQQQGL 599
>gi|67923383|ref|ZP_00516863.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
gi|67854764|gb|EAM50043.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
Length = 806
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 231/801 (28%), Positives = 363/801 (45%), Gaps = 165/801 (20%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW++L +++F T +G A + I + DS LL +T +++
Sbjct: 2 IYRETLNLLEWERLGQHLATFTATKMG--AIAARNLPIPTSLADSKELLAQTQEIYGLEQ 59
Query: 109 HGSCSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAV- 145
+ G+ +++ + +R +RR + E L V
Sbjct: 60 NLEIRWTFEGITDVGDSLKRATLKGILSGKELLNIATTLAGMRRLRRI--IDDCEELPVL 117
Query: 146 ---VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNE 191
VA ++ L+ ++ I E + R P + +YQ + +I+ +
Sbjct: 118 KELVADIRTYPELEKAIHHCIDEAGKVTDRASPKLESIRHNLKEVRDRIYQKLQNIIQQK 177
Query: 192 NNESLFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
++ R I A Q G+ +SG G IEP S V + ++ +Q
Sbjct: 178 GGAIQEPVITQRGDRFVIPVKAGQKEQIPGITHDTSGTGGTFYIEPNSVVQMGNKRRQYL 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
+ EE +L LTEK+ +++E +L + LD+ ARA YS G P QD
Sbjct: 238 RQEEREEETILRQLTEKIAEVAEDLEYLLAIAMVLDLATARARYSFWLGANPPRFI--QD 295
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
+ TI L + +HPLL+ Q K
Sbjct: 296 KE-------------------TITLRQLHHPLLVWQEKH--------------------- 315
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICLK 427
E PV PI++ I RV+ ITGPNTGGKT+ LK
Sbjct: 316 -------------------------EQGSPVIPINVQIKPDIRVIAITGPNTGGKTVTLK 350
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS-- 485
T+GLA +MAK GL + + E ++PWF+ + ADIGDEQS+ Q+LSTFSGH+++I I+
Sbjct: 351 TLGLAALMAKVGLFVPAKEPVEIPWFEKILADIGDEQSIEQNLSTFSGHIRRIVRILEAL 410
Query: 486 -----------QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 534
S S SL+LLDE+GAGT+P EG+AL M+LL A+ LTIATTH+GE
Sbjct: 411 EQATLSPETLPHSPSPSLILLDEVGAGTDPAEGSALAMALLNRLADQAR-LTIATTHYGE 469
Query: 535 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 594
LK LKY + FENA +EFD+ PTY++LWG+PGRS+A++IA+RLGL V+ A+
Sbjct: 470 LKALKYEDSRFENASVEFDDRTFSPTYRLLWGIPGRSNALSIAQRLGLDVDVIDEAKTRI 529
Query: 595 GAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRK 654
G S ++N+VI +E + + E EA+ L + + + + + E Q ++
Sbjct: 530 GGLSQDVNDVIAGLEAQRRKQEEKAQEAQKLLQQTEKFYGEVTQKATALQER--EQDLKR 587
Query: 655 VQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVL 714
Q++ AIA A + + V + Q+ S+ + T+
Sbjct: 588 YQELEVQKAIA-------------DAKEEIAKVIRNLQKGNKSSQNAQKATEA------- 627
Query: 715 TSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEP 774
+N Q + K K P+V + P VG+ + +S+ G+ V++V
Sbjct: 628 INNISQRQLPK---------------KVKPKV--SYQPKVGEKIRLSNLGQTAEVLEVSA 670
Query: 775 SKEEIVVQVGNMKWIMKFTDI 795
EE++V+ G MK + F DI
Sbjct: 671 EDEEVMVRFGLMKMTVAFRDI 691
>gi|428309185|ref|YP_007120162.1| MutS2 family protein [Microcoleus sp. PCC 7113]
gi|428250797|gb|AFZ16756.1| MutS2 family protein [Microcoleus sp. PCC 7113]
Length = 839
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 239/829 (28%), Positives = 373/829 (44%), Gaps = 191/829 (23%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L++LEW +LC +++FA T LG A T +SL LL +T +++ +
Sbjct: 5 ETLQLLEWSRLCQHLATFAATKLG--AIAAHHLQPPATLSESLDLLTQTKEVYQLEARLT 62
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEAL--AVVA 147
L G+ ++ S +R +RR + + + +VA
Sbjct: 63 SGLSFEGIQDIGESLERAELQGLLSGEELLAIATTLSGVRRLRRVIDDQEDVPILNELVA 122
Query: 148 LLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNESL 196
++ L+ + +I E D+ R P L +YQ++ +++ +
Sbjct: 123 EVRTYPELEQEIHHSIDERGDVADRASPKLAGIRLKLKSLRDRIYQVLQGILQRQGGAVQ 182
Query: 197 FLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTK 253
++ R I A Q + G++ SS+G +EP + V L+++L+ R
Sbjct: 183 QQVITQRGDRFVIPVKAPQKDAIPGIVHDTSSTGATVYVEPNAIVGLSNQLRIHRRQEQT 242
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
EE +L ALT+++ ++EK+L LD+ A+A YSL P Q +
Sbjct: 243 EEEAILRALTQQVAAVKPDLEKLLAVATALDLATAKARYSLWLQANPPRFIDRQAGE--- 299
Query: 314 THEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKLYGG 371
TI L + HPLL+ QQH+Q T
Sbjct: 300 ----------------TITLRELRHPLLVWQQQHEQGT---------------------- 321
Query: 372 NAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
P VPI++ I RV+ ITGPNTGGKT+ LKT+GL
Sbjct: 322 -------------PV------------VPINVQIQPSIRVVAITGPNTGGKTVTLKTLGL 356
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII------- 484
A +MAK GL + + E ++PWFD V ADIGDEQS+ QSLSTFSGH+++I I+
Sbjct: 357 AALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIRRISRILEAIRGES 416
Query: 485 --------------------------------------SQSTSQSLVLLDEIGAGTNPLE 506
+ + S SLVLLDE+GAGT+P E
Sbjct: 417 EALQVDTLLAPRQNSDEDAAQVESWEDDAQTSNLLQPSTPAPSPSLVLLDEVGAGTDPAE 476
Query: 507 GTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWG 566
G+AL ++LL+ A + L T+ATTH+GELK LKY ++ FENA +EFD+ L+PTY++LWG
Sbjct: 477 GSALAIALLQHLANTAQL-TVATTHYGELKALKYQDERFENASVEFDDSTLQPTYRLLWG 535
Query: 567 VPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL 626
+PGRS+A+ +A RLGL VV A+ L G AS +IN+VI +E + + EA L
Sbjct: 536 IPGRSNALAVARRLGLNPNVVDQAQSLIGGASEDINQVIAGLEAQRRRQETKAKEATQLL 595
Query: 627 MLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
+ LH+ + R ++L ++R R + K+S A+ +LV QA+
Sbjct: 596 QQAERLHQE-VSDRARLL----NERERTL-KLSQERAVQEALV------------QAKEE 637
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
+ + + L+ K +N T Q+ ++ PA + KQ P
Sbjct: 638 IAQVIRTLQ-------QGPKSAQNAQKATDALQEIAQRRL--PAKLPA------KQKPSF 682
Query: 747 KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ P VGD + + + V+ E+ V+ G MK + +D+
Sbjct: 683 R----PKVGDRIRIPRLNQTAEVLSAPDEDGELTVRFGLMKMTVLLSDV 727
>gi|126657853|ref|ZP_01729006.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
gi|126620793|gb|EAZ91509.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
Length = 818
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 231/819 (28%), Positives = 378/819 (46%), Gaps = 188/819 (22%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +LC +++FA T +G AT + I + ++S LL++T +++
Sbjct: 2 IYKETLNLLEWPRLCQQLATFAATKMG--ATAARNLPIPTSLEESKELLEQTKEIYRLEQ 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETL--QLSLRAAIKED 166
+ G+ + + + + + L+ N L+ LL + TL LR I++
Sbjct: 60 NLEIKWTFEGI------TDVGDSLKRATLKGN--LSGKELLNIATTLAGMRRLRRIIEDY 111
Query: 167 ADLY--------IRFMP-LTQMLYQLMDML-------------IRN---ENNESLFLEVS 201
+L IR P L + ++ +D IR+ EN + ++ ++
Sbjct: 112 EELPTLTELVADIRTYPELEKTIHHCIDEAGKVADRASTKLGEIRHNLKENRDRIYQKLQ 171
Query: 202 SI----------------HGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLND 242
+I R + A Q G++ +SG G IEP S V + +
Sbjct: 172 NIMQQKGGAIQETVITQRGDRFVLPVKAAQKEQIPGIIHDTSGTGGTFYIEPNSVVQMGN 231
Query: 243 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
+ +Q + EE +L L+E++ +++E +L LD+ AR+ YS GG +P
Sbjct: 232 KRRQYLRQEEREEEAILRQLSEQVAEVAEDLEYLLAIATILDLATARSRYSFWLGGNAPR 291
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
E + TI L + +HPLL+ W+
Sbjct: 292 FI---------------------EDKETITLRQLHHPLLV----------WQ-------- 312
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
E+ SP VPI++ I + RV+ ITGPNTGGK
Sbjct: 313 ---------------ERHEQGSPV------------VPINVQINPEIRVIAITGPNTGGK 345
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI-- 480
T+ LKTVGLA +MAK GL + + E ++PWF + ADIGDEQS+ Q+LSTFSGH+++I
Sbjct: 346 TVTLKTVGLAALMAKVGLFVPAKEPVELPWFKQILADIGDEQSIEQNLSTFSGHIRRIVR 405
Query: 481 ---------------------GNIISQSTSQ---SLVLLDEIGAGTNPLEGTALGMSLLE 516
G+++S++ SL+LLDE+GAGT+P EG+AL ++LL
Sbjct: 406 ILEALDQGTESREQEAGIRDQGSVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLH 465
Query: 517 AFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINI 576
A+ L TIATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A++I
Sbjct: 466 HLADHARL-TIATTHYGELKALKYEDSRFENASVEFDDRSLSPTYRLLWGIPGRSNALSI 524
Query: 577 AERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
A+RLGL +V+ A+ G S ++N+VI +E + + E EA+ L + + +
Sbjct: 525 AQRLGLDHEIVEEAKTRIGGLSQDVNDVIAGLEAQRREQEEKALEAQKLLQETEKFYTEV 584
Query: 637 LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+ + + + Q++ A A A+ + + + L QQ +
Sbjct: 585 TEKATALQQREQDLKRHQEQEVQKAIAEAKEEIAQVIRNL---------------QQGKK 629
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
S+ ++ T+ +N Q + K P + P VG+
Sbjct: 630 SSQKAQQATEA-------ITNIGQKQLPKKAKPTVSYQ-----------------PKVGE 665
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ +S+ G+ V+ V P EE++V+ G MK + F DI
Sbjct: 666 KIRLSNLGQTAEVLDVSPEDEEVMVRFGLMKMTVSFRDI 704
>gi|284929397|ref|YP_003421919.1| MutS2 family protein [cyanobacterium UCYN-A]
gi|284809841|gb|ADB95538.1| MutS2 family protein [cyanobacterium UCYN-A]
Length = 810
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 241/809 (29%), Positives = 373/809 (46%), Gaps = 182/809 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L++LEW +LC +++FA T +G T Q I + +S LL +T +++
Sbjct: 5 ETLKLLEWSRLCSHLATFATTKMG--ITAAQNPDIPELLTESQELLSQTEEVYYLEQDPK 62
Query: 112 CSL-------------------DLTGVDLSLVKSAIREVRRASPL-RPNEALAVVALLQF 151
L L+G DL + + +VRR + E L + L +
Sbjct: 63 IKLIFEGIVDIRDVVKIAALGGYLSGKDLLGIAITLDKVRRLRKIVNSYEKLPLFNLKKL 122
Query: 152 SET------LQLSLRAAIKEDADLY---------IRFM--PLTQMLYQLMDMLIRNENN- 193
L+ ++R + E+ D+ IR + L +YQ + +I +
Sbjct: 123 VNNIKTYPELEQTIRYCVDENGDITEHASSKLSKIRLLLRELRNEIYQKLQSIINKKAGA 182
Query: 194 --ESLFLEVSSIHGRLCIRTGA---DQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQAR 248
ESL ++ + R I DQ+ S++G+ IEP V + ++ Q
Sbjct: 183 IQESL---ITQRNNRFVIPVKTLQKDQIPGIVHDTSNTGMTVYIEPSYIVDIGNKYCQYL 239
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
T E +L LTEK+ + ++ ++ I +LD+ ARA YSL GG P
Sbjct: 240 RQETIEEIVILRQLTEKIAEVAESLKYLVEAIQKLDLATARARYSLWLGGNIPQFI---- 295
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
E TI L K YHPLL+ Q QK +Q
Sbjct: 296 -----------------EEGETIILRKLYHPLLIWQ--QKKEQG---------------- 320
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
+QV VPIDI I K V+ ITGPNTGGKT+ LKT
Sbjct: 321 -------------------VQV--------VPIDIQINSKINVVSITGPNTGGKTVTLKT 353
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ-- 486
+GLA +MAK GL I + K+PWF +V ADIGDEQS++Q+LSTFS H+++I I+
Sbjct: 354 LGLAALMAKVGLFIPAVSPVKLPWFKNVLADIGDEQSITQNLSTFSSHIRRIILILKAVS 413
Query: 487 --------------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHH 532
SLVLLDE+GAGT+P EG+AL +SLL A + +LLTIATTH+
Sbjct: 414 NSSKSNSSKILNKFKNCSSLVLLDEVGAGTDPTEGSALAISLLSHLA-NHALLTIATTHY 472
Query: 533 GELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
GE+K LKY + FENA +EF++ P+Y++LWG+PGRS+AI+IA+ LGL ++Q AR
Sbjct: 473 GEIKALKYRDSRFENASVEFNDQTFSPSYRLLWGIPGRSNAISIAQNLGLDLNILQAARN 532
Query: 593 LYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN------LLRTRRKILEH 646
+ G S ++N++I+ +E + + +EA+ L ++N + +L+ R + L+H
Sbjct: 533 IVGEQSKDVNDIILGLEEQRNKQELKANEAQELLKQAKNFYTEVSDKAVILKEREQELKH 592
Query: 647 CASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTK 706
K Q+ SA + + V + QQ ++ ++L TK
Sbjct: 593 FQ---------------------EKEIQKAISSAKEEIAQVIRHLQQGDKTSQKALQATK 631
Query: 707 VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKK 766
+L + ++ K E+ + P++ G+ V ++ FG+
Sbjct: 632 -----EILNISKEKLPQVKKEYSSYC-----------PKI--------GEKVKITKFGQN 667
Query: 767 GTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+ V +E+VV+ G M + FTDI
Sbjct: 668 AQVLDVIADSQEVVVRFGLMTMKILFTDI 696
>gi|443312975|ref|ZP_21042589.1| MutS2 family protein [Synechocystis sp. PCC 7509]
gi|442777125|gb|ELR87404.1| MutS2 family protein [Synechocystis sp. PCC 7509]
Length = 792
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 229/788 (29%), Positives = 368/788 (46%), Gaps = 154/788 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A I + S LL +T +++ +
Sbjct: 5 ETLELLEWSRLCQHLSTFAATKLGSIAARN--LQIPASQLQSEELLAQTKEVYDLETRLT 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEAL--AVVA 147
L G+ +++ R++RR +P+ + +V+
Sbjct: 63 TGLAFDGIQDIGDSVERAQLQGILAGNELLEIATTLFGARQLRRFIDNQPDIPVLTQLVS 122
Query: 148 LLQFSETLQLSLRAAIKEDADLYIRFMPL------------TQMLYQLMDMLIRNENNES 195
L+ L+ + I E + R P+ TQ+ L ++L R N +
Sbjct: 123 ELRTYPELEQEIHRCIDERGQVTDRSSPILGDLRTQIKQLRTQINRSLQNILQRQAN--A 180
Query: 196 LFLEVSSIHG-RLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASV 251
+ ++ + G R I A Q + G++ S+SG +EP VPL ++L+Q
Sbjct: 181 VQEQIITQRGDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPSGVVPLGNQLRQLVRKE 240
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
EE + LT+ + +++E++L +D+ ARA YS P D +
Sbjct: 241 QVEEEAIRRTLTKLVAEVSEDLERLLAIATTIDLATARARYSFWLKANPPRFINRNDGE- 299
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGG 371
I L + HPLL+ Q +
Sbjct: 300 ------------------MINLRQLRHPLLVWQQQH------------------------ 317
Query: 372 NAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
E+D N+ VP+D+FI RV+ ITGPNTGGKT+ LKT+GL
Sbjct: 318 ------EQDRNV---------------VPVDLFIQPNIRVVTITGPNTGGKTVTLKTLGL 356
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS--QSTS 489
A +MAK GL I + E ++PWF+ V DIGDEQSL QSLSTFSGH+++I I++ +
Sbjct: 357 AALMAKVGLFIPAREPVEMPWFEQVLTDIGDEQSLEQSLSTFSGHIRRISRILTAIDKSG 416
Query: 490 QSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENAC 549
SLVLLDE+GAGT+P+EG+AL +SLL A + L+IATTH GELK LKY +D FENA
Sbjct: 417 SSLVLLDEVGAGTDPVEGSALAISLLHYLANNAQ-LSIATTHFGELKALKYQDDRFENAS 475
Query: 550 MEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
+EFDE+ L PTY++LWG+PGRS+A+ IAERLGL V++ A++ G A+ ++N+VI +E
Sbjct: 476 VEFDEISLSPTYRLLWGIPGRSNALTIAERLGLKLEVIEEAKKHLGGANDDVNQVIAGLE 535
Query: 610 RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLV 669
+ + EA +K+LE ++RF + AA AR
Sbjct: 536 AQRKRQETKATEA------------------QKLLEQ--AERFYQEVSAKAAALQARERD 575
Query: 670 HKSAQQLC--PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVE 727
+++Q + + S+A+ + + ++L+ ++ + + + +N+
Sbjct: 576 LRASQDVVVQKAISEAKGEIAQVIRRLQKGTVTAMDAQQATNELNQIAANY--------- 626
Query: 728 HPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
+ P+ K P +GD + + G+ V+ + + +++V+ G MK
Sbjct: 627 ------------VAPPPKPKPGFKPQIGDRLRIPKLGQTAEVLSIPSDEGDLIVRFGIMK 674
Query: 788 WIMKFTDI 795
+ DI
Sbjct: 675 MTVNLEDI 682
>gi|16330262|ref|NP_440990.1| recombination and DNA strand exchange inhibitor protein
[Synechocystis sp. PCC 6803]
gi|383322003|ref|YP_005382856.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325172|ref|YP_005386025.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491056|ref|YP_005408732.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436323|ref|YP_005651047.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|451814420|ref|YP_007450872.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|3914083|sp|P73625.1|MUTS2_SYNY3 RecName: Full=MutS2 protein
gi|1652751|dbj|BAA17670.1| DNA mismatch repair protein; MutS [Synechocystis sp. PCC 6803]
gi|339273355|dbj|BAK49842.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|359271322|dbj|BAL28841.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274492|dbj|BAL32010.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277662|dbj|BAL35179.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407958177|dbj|BAM51417.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|451780389|gb|AGF51358.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
Length = 822
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 237/814 (29%), Positives = 380/814 (46%), Gaps = 170/814 (20%)
Query: 42 SDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN 101
SD + E+L +LEW +LC +S+F +T LG A + +++S LL +T
Sbjct: 2 SDSTNLTIAEETLALLEWPRLCQHLSTFTQTPLG--AIAARYLLPPSQWEESRELLAQTQ 59
Query: 102 AAIEMQK------HGSCSLDLT-------------GVDLSLVK---SAIREVRRASPLRP 139
A ++ H D+T G++L + + +R +RR R
Sbjct: 60 AVESIENSPESNWHFKGIADITEPLARVERGGLVTGLELLAIAGTLAGVRRLRRVIEERD 119
Query: 140 NEAL--AVVALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDM 186
+ + +VA ++ L+ ++ + ED + R P + + + Q +
Sbjct: 120 DLEILQTLVAEVRTLPELEQAIHHCLGEDGKVAERASPKLGEIRQKLKAVREQIQQKLQK 179
Query: 187 LIRNENNESLFLEVSSIHGR-----LCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVP 239
+I+ ++N L+ + I R L I+ G + G++ SS G+ +EP + V
Sbjct: 180 IIQRQSN---ALQEAVITQRGDRFVLPIKAGYKE-QMPGIVHDSSASGNTLYVEPQAIVE 235
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
L ++L+QAR EE +L L++++ L ++E +L +LD+ AR YS G
Sbjct: 236 LGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLAIATRLDLATARVRYSFWLGAH 295
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 359
P P D K P+T L + HPLL Q +++
Sbjct: 296 PPQWLTPGDEK------PIT-------------LRQLRHPLLHWQAEKE----------- 325
Query: 360 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 419
GG A VPI + I + RV+ ITGPNT
Sbjct: 326 ----------GGPAV------------------------VPITLTIDSQIRVIAITGPNT 351
Query: 420 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 479
GGKT+ LKT+GL +MAK GL+I + E ++PWF + ADIGDEQSL Q+LSTFSGH+ +
Sbjct: 352 GGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFSGHICR 411
Query: 480 IGNIISQSTS------------------QSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
I I+ S SLVLLDE+GAGT+P EG+AL ++LL A+
Sbjct: 412 IIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLRHLADQ 471
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
LT+ATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A+ IA+RLG
Sbjct: 472 -PCLTVATTHYGELKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLG 530
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP +V+ A+ G S +IN+VI +E + + + A+ L + ++
Sbjct: 531 LPLAIVEQAKDKLGGFSEDINQVIAGLESQRREQEQKAANAQKLLQETEIFYQ------- 583
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
++ + AS + R+ + +S + QQ +A + + V ++ Q+ +PSA ++
Sbjct: 584 QVSQKAASLQARERE--------LKSYQDQEVQQAIAAAKEEIAKVIRQLQRGKPSAQKA 635
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
T++ Q KV +P+ + P VG+ + +
Sbjct: 636 QQATEI-------LGQIQAEQKAKV----------------APKPIGYQ-PTVGERIRIP 671
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
SFG+ V +V + + + V +G MK + DI
Sbjct: 672 SFGQTAEVTQVNATAQTVNVTLGLMKMTVPMADI 705
>gi|254412960|ref|ZP_05026732.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180124|gb|EDX75116.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 820
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 229/813 (28%), Positives = 362/813 (44%), Gaps = 178/813 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A ++ T +SL LL +T +++
Sbjct: 5 ETLELLEWQRLCQHLATFAATKLG--AIASRHLHPPATLAESLHLLAQTKEVYQLE---- 58
Query: 112 CSLD-----------------------LTGVDLSLVKSAIREVRRASPL-RPNEALAV-- 145
C L L+G DL + + + VRR L E + V
Sbjct: 59 CQLTSGWTFEGIQDIGDALERAERQGILSGEDLLAIATTLAGVRRLRRLIDDQEDIPVLN 118
Query: 146 --VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNEN 192
VA ++ L+ + I E D+ R P L +YQ + +++ +
Sbjct: 119 QLVADIRTYPELEQEIHRCIDERGDVTDRASPKLAEIRQHSKSLRDRIYQTLQNIVQRQG 178
Query: 193 NESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARA 249
++ R + A Q S G++ +S G+ IEP + V L ++L+ +
Sbjct: 179 GALQQPLITQRGDRFVLPVKAPQKDSVSGIVHDASSTGATLYIEPHAIVGLGNQLKTYQR 238
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
E V LTE++ ++E++L +LD+ A+A YSL P P
Sbjct: 239 REQAEAEAVRRVLTEQVAAVKPDLEQVLAVATRLDLATAKARYSLWLQANPPRFIDP--- 295
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
++RE +I L + HPLL+ Q++ +
Sbjct: 296 ---------------NQRE-SITLRQLRHPLLVWQYQHE--------------------- 318
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
E A VPI I I + +V+ ITGPNTGGKT+ LKT+
Sbjct: 319 ------------------------EDAPVVPITIQIQPQIKVVAITGPNTGGKTVTLKTL 354
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ--- 486
GLA +MAK GL + + E ++PWF+ + ADIGDEQSL QSLSTFSGH+++I I+ +
Sbjct: 355 GLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSLEQSLSTFSGHIRRISRILEELEN 414
Query: 487 ------------------------STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
+ +LVLLDEIGAGT+P EG+AL ++LL A+
Sbjct: 415 CRAPWRVSTDGGEDDLAQREPDTPHPTSALVLLDEIGAGTDPAEGSALAIALLNYLADHA 474
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
L T+ATTH+GELK LKY ++ FENA +EF++V L PTY++LWG+PGRS+A+ IAERLGL
Sbjct: 475 QL-TVATTHYGELKALKYQDERFENASVEFNDVTLSPTYRLLWGIPGRSNALTIAERLGL 533
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
VV A+ L G +S ++N+VI +E + EA L + LH+ + +
Sbjct: 534 KSDVVSLAQTLVGGSSEDVNQVISGLEAQRRDQETKAQEANQLLQQTERLHQEVSSKAKL 593
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
+ E + + Q + DA A A++ + + ++L ++ Q+ +A ++
Sbjct: 594 LQERERELKLSQEQAVQDAIAQAKAEIAQVIRKL------------QQGPQIAQNAKKAT 641
Query: 703 HCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSS 762
K + +H+ + + P VGD + +
Sbjct: 642 DALKEIEQRHIPKPPAKAKPAFQ--------------------------PKVGDRIRIPR 675
Query: 763 FGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ V+ E+ V+ G MK + DI
Sbjct: 676 LNQTAEVLTPADEDGELTVRFGLMKMTVSLADI 708
>gi|119512341|ref|ZP_01631426.1| MutS 2 protein [Nodularia spumigena CCY9414]
gi|119462992|gb|EAW43944.1| MutS 2 protein [Nodularia spumigena CCY9414]
Length = 770
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 288/605 (47%), Gaps = 142/605 (23%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EP S VP ++L+Q EE + +LT+K+ ++E++L + L
Sbjct: 166 STSGATLYVEPNSIVPFGNQLRQTIRREQTEEEAIRRSLTQKVAEVKPDLERLLAIVTTL 225
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D+ ARA YS G P +D + I L + HPLL+
Sbjct: 226 DLATARARYSFWLGANPPRFINREDNE-------------------MITLRQLRHPLLVW 266
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
Q + + QA VP+D+
Sbjct: 267 QQQHEHGQAV---------------------------------------------VPVDL 281
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I+ RV+ ITGPNTGGKT+ LKT+ LA +MAK GL + + E ++PWF+ V ADIGDE
Sbjct: 282 LISPHLRVVTITGPNTGGKTVSLKTLALAALMAKVGLFVPAREPVEIPWFEQVLADIGDE 341
Query: 464 QSLSQSLSTFSGHLKQIGNII--------SQSTSQS-------------------LVLLD 496
QSL QSLSTFSGH+++I I+ S++ S S LVLLD
Sbjct: 342 QSLQQSLSTFSGHIRRISRILNALDQEEESENISLSPDSPHSPHTPHTPHTPHSSLVLLD 401
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
E+GAGT+P+EG+AL ++LL+ A LTIATTH GELK LKY ++ FENA +EFDE
Sbjct: 402 EVGAGTDPVEGSALAIALLQYLANHAQ-LTIATTHFGELKALKYEDERFENASVEFDEST 460
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFL 616
L PTY++LWG+PGRS+A+ IA RLGL V+ A+ G A+ E+N+VI +E + +
Sbjct: 461 LSPTYRLLWGIPGRSNALTIARRLGLKPEVITQAKTQVGGATDEVNQVIAGLEAQRRRQE 520
Query: 617 EHVHEARHFLMLSRNLHKNL------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
EA+ L + L+K + L+ R K L R Q+++ AIA+
Sbjct: 521 TKAAEAQSLLQQAERLYKEVSAKSDALQEREKAL--------RADQEVAVQQAIAQ---- 568
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
A + V +R Q+ P A + T NQ ++ +Q
Sbjct: 569 ---------AKGEIAQVIRRLQKGTPKAQDAQQATD-ALNQ--ISQKYQP---------- 606
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
K +P+ K +P VGD V +S FG+ V+ + E V+ G MK +
Sbjct: 607 ----------KVAPKPKVGFMPKVGDRVRLSQFGQTADVLTSPDADGEFSVRFGIMKMTV 656
Query: 791 KFTDI 795
K DI
Sbjct: 657 KLEDI 661
>gi|218441797|ref|YP_002380126.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7424]
gi|218174525|gb|ACK73258.1| MutS2 family protein [Cyanothece sp. PCC 7424]
Length = 803
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 237/805 (29%), Positives = 375/805 (46%), Gaps = 182/805 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A Q + T ++S +LL +T +++ +
Sbjct: 7 ETLDLLEWHRLCQHLSTFAATKLG--AIAAQYMRLPDTKEESCQLLAQTEEVYDLENRLN 64
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEALAV---- 145
L G+ ++ + +R +RR + E + V
Sbjct: 65 TKLSFDGISDIGDALERADLGGLLSGKELLSIATTLAGVRRLRRI--IEEQEEIPVLKEL 122
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLY-QLMDMLIRNEN- 192
VA ++ ++ + I+ED + R P + + +Y +L D++ R
Sbjct: 123 VADVRTYPEIEQDIHRCIEEDGKVSDRASPRLREIRGQIKVVRERIYRKLQDIMQRQSGA 182
Query: 193 -NESLFLEVSSIHGRLCIRTGA---DQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQ 246
ES+ + R + A DQ+S G++ SS G+ IEP S V ++L+Q
Sbjct: 183 IQESVITQRGD---RFVLPVKAPQKDQIS--GIIHDSSSTGATLYIEPHSVVEQGNQLRQ 237
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
EE +L LT+++ +++E +L LD+ AR+ YS P
Sbjct: 238 HHRQEQIEEEVILRGLTQQIAQVKEDLEYLLAVATTLDLAVARSRYSWWLQANPPRFID- 296
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
+ EP+T L + HPLL+ W+ E+
Sbjct: 297 -------STEPIT-------------LRQLRHPLLV----------WQQNHEQGVEV--- 323
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
VPI++ + K RV+ ITGPNTGGKT+ L
Sbjct: 324 --------------------------------VPINVQVDPKIRVVAITGPNTGGKTVTL 351
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII-- 484
KT+GLA +MAK+G+ I + ++PWF+ + ADIGDEQSL QSLSTFSGH++++ II
Sbjct: 352 KTIGLATLMAKAGIFIPAKVPVELPWFEEILADIGDEQSLQQSLSTFSGHIRRMIRIIEA 411
Query: 485 --------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
++ + SLVLLDE+GAGT+P EG+AL +LL+ A+ LTIATTH+GELK
Sbjct: 412 LNGSSPEETKPPASSLVLLDEVGAGTDPAEGSALATALLKYLADQAQ-LTIATTHYGELK 470
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 596
LKY ++ FENA +EF++ L PTY++LWG+PGRS+A+ IA RLGL +++ AR G
Sbjct: 471 ALKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRLGLRPEIIEEARTRVGG 530
Query: 597 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH------KNLLRTRRKILEHCASQ 650
S +IN+VI +E + + + EA L + + N L+ R K L+ Q
Sbjct: 531 FSEDINQVIAGLEEQRREQEQKAKEASKLLQETERFYAEVSEKANALQQREKDLKQLQEQ 590
Query: 651 RFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN 710
+K A A A++ + + +QL + A++ AQ+ A+ +L T++ +
Sbjct: 591 EIQK------AIAQAKAEIAQVIRQLQQGNTTAQN-----AQK----ATDAL--TQIAER 633
Query: 711 QHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI 770
Q + K +HP + P VG+ V + G+ V+
Sbjct: 634 Q-----------LPKQKHPPISYR-----------------PKVGEKVRIPGLGQTAEVL 665
Query: 771 KVEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE+ V+ G MK + FTDI
Sbjct: 666 SLSEESEEVSVRFGIMKMTVPFTDI 690
>gi|220908146|ref|YP_002483457.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7425]
gi|219864757|gb|ACL45096.1| MutS2 family protein [Cyanothece sp. PCC 7425]
Length = 818
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 248/814 (30%), Positives = 372/814 (45%), Gaps = 180/814 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
++L +LEW +LC +++FA T LG L + I + +S L+ +T ++
Sbjct: 7 KTLELLEWPRLCQHLATFACTKLG--TLLARNLPIPTSEAESQMLMQQTQEVYTLENASP 64
Query: 112 CSLD-------------------LTGVDLSLVKS---AIREVRRASPLRPNEALA---VV 146
SL LT V+LS + S A R +RR +P+ L V
Sbjct: 65 TSLSFEGIYDLTHALERAGLGGLLTAVELSQIASTLAAARNLRRTIERQPDCPLLSQLVT 124
Query: 147 ALLQFSETLQ-----------LSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNEN--N 193
L + E Q ++ RA+ K + Q+ L D+L R N
Sbjct: 125 PLRTYPELEQEIHRCIDDAGEVADRASAKLTDIRDRQRQVRQQIQRILQDILQRKANALQ 184
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQ-ARA 249
E++ + S R I A Q + G++ SS G+ IEP S + LN++L+Q AR
Sbjct: 185 EAVITQRSD---RFVIPVKAPQKDAIPGIVHDSSSSGATLYIEPQSTINLNNQLRQLARQ 241
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
T+ E +L L++++ ++E++L + LD+ AR+ YS G P+
Sbjct: 242 EQTEVEA-ILRQLSQQVGAVQADLEQLLQIVTHLDLAAARSRYSTWLEGNRPHFI----- 295
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRK 367
KV S+++ I L + HPLL+ Q+H+Q
Sbjct: 296 -----------KVHSNDK---ITLRQLRHPLLVWQQRHEQG------------------- 322
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLK 427
A VPID+ I +TRV+V+TGPNTGGKT LK
Sbjct: 323 ----------------------------APVVPIDLSIHPQTRVVVMTGPNTGGKTASLK 354
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII--- 484
T+GL +MAK+GL I + E ++PWF+ + ADIGDEQSL QSLSTFSGH++ I I+
Sbjct: 355 TLGLTALMAKAGLFIPAREPVELPWFEQILADIGDEQSLQQSLSTFSGHIRCISQILDAL 414
Query: 485 --------------------SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSL 524
S S +Q+LVLLDE+GAGT+P EGTAL ++LL A+ +
Sbjct: 415 DDPNADPSASLMENGHDHISSDSLAQALVLLDEVGAGTDPTEGTALAIALLHYLADH-TY 473
Query: 525 LTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPG 584
LT+ATTH GELK LKY + FENA +EFDE L PTY++LWG+PGRS+A+ IA RLGL
Sbjct: 474 LTVATTHFGELKALKYQDQRFENASVEFDEASLAPTYRLLWGIPGRSNALAIARRLGLNE 533
Query: 585 IVVQNAR-QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V+ A +L G + ++N+VI +E + Q A L + LH+ L + ++
Sbjct: 534 RVLTAAETELGGRKTEDVNQVIAGLEAQRKQQETRSQAAAELLAQTERLHRELEQKAAQL 593
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+ R ++ Q + A A A++ V + +QL +
Sbjct: 594 QAREQTLRQQQEQTVQQAIATAKAEVARIIRQLQQGQTAQ-------------------- 633
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ--SPRVKRTELPNVGDLVHVS 761
+ +D+V ++ + KQ SP K P +GD V +
Sbjct: 634 -----------DAQQASQALDQV------ATEYLPSRKQPTSPPPKPGFRPQLGDRVRIP 676
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
S G+ VI E+ V+ G MK + T+I
Sbjct: 677 SLGQTAEVITAPNVDGELTVRFGLMKMNLNLTEI 710
>gi|257061571|ref|YP_003139459.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8802]
gi|256591737|gb|ACV02624.1| MutS2 family protein [Cyanothece sp. PCC 8802]
Length = 830
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 238/821 (28%), Positives = 375/821 (45%), Gaps = 185/821 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG + Q SI ++S +LL +T ++++
Sbjct: 5 ETLELLEWSRLCQHLATFAATKLG--SLSAQKLSIPTNIEESKQLLAQTQEIYRLEQNLD 62
Query: 112 C--SLD-----------------LTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQ- 150
S D L+G +L + + + VRR + N E ++A L
Sbjct: 63 IKWSFDGINDIGDSLERAQLGGMLSGQELLNIATTLAGVRRLRRIIENQEDFPILAELVE 122
Query: 151 ---------------FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNES 195
E +++ RA++K ++ + + Q + +I+ +
Sbjct: 123 DVRTYPEIEQNIYHCIDEAGKVADRASVKL-GEIRRHLKDIRDRIVQKLQNIIQRQGGAI 181
Query: 196 LFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
++ R I A Q G++ SS G+ IEP S V ++ +Q
Sbjct: 182 QEPVITQRGDRFVIPVKAPQKDQIPGIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQ 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
EE +L L+ ++ D+++ +L LD+ A+A YSL G +P F+ D
Sbjct: 242 VEEEAILRKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAPR-FINFDQT-- 298
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
EP+T L + HPLL+ Q K
Sbjct: 299 ---EPIT-------------LRQLRHPLLVWQQKH------------------------- 317
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
E PV PI++ + K RV+ ITGPNTGGKT+ LKT+GL
Sbjct: 318 ---------------------EQGVPVVPINVQVDPKIRVVAITGPNTGGKTVTLKTIGL 356
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI----------- 480
A +MAK GL I + E ++PWF+ V ADIGDEQS+ QSLSTFSGH+++I
Sbjct: 357 AALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRIVRITEGLGNQE 416
Query: 481 ---------GNIISQSTSQ-----------------SLVLLDEIGAGTNPLEGTALGMSL 514
GN Q +S+ +LVLLDE+GAGT+P EG+AL ++L
Sbjct: 417 DQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLVLLDEVGAGTDPAEGSALAIAL 476
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L A+ +LLTIATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A+
Sbjct: 477 LNYLADH-ALLTIATTHYGELKALKYQDSRFENASVEFDDQTLSPTYRLLWGIPGRSNAL 535
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA+RLGL +VQ A+ G S EIN+VI +E + + + EA+ L + +
Sbjct: 536 IIAQRLGLNLEIVQEAKTRIGGFSEEINQVIAGLEAQRREQEQKALEAKQLLQKTEKFYT 595
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ + + + + Q++ A A A+ + + +QL Q S ++AQQ
Sbjct: 596 EVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEIAQVIRQL-----QQGSQTAQKAQQ- 649
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
A+++L QH L P T P+ + + P V
Sbjct: 650 ---ATEALDQI----TQHQL--------------PKT------------PKKQASYQPKV 676
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ + +S+ G+ V++++ + + V+ G MK + T+I
Sbjct: 677 GERIRLSNLGQTAEVLEIDEEAQALTVRFGLMKMTVALTEI 717
>gi|81299422|ref|YP_399630.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 7942]
gi|81168303|gb|ABB56643.1| MutS2 family protein [Synechococcus elongatus PCC 7942]
Length = 796
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 241/793 (30%), Positives = 368/793 (46%), Gaps = 158/793 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
V E+L +LEW LC V+SFA T+L R A + + +Q +S LL +T A ++
Sbjct: 7 VEQEALELLEWPLLCQQVASFAATALARRAARSLPLASSQA--ESEYLLSQTAEAQALEL 64
Query: 109 HGSCSLDLTGV----------------------DLSLVKSAIREVRR---ASPLRPNEAL 143
L GV ++ +A+R++RR A+ P
Sbjct: 65 TLPQGLPFAGVFDIGEALARVERQAVLSGEELLQIASTLAAMRQLRRLIDAAEAAPT-LQ 123
Query: 144 AVVALLQFSETLQLSLRAAIKEDADLYIR-----------FMPLTQMLYQLMDMLIRNEN 192
A+VA L+ L+ + I++ ++ R + + ++ L+RN++
Sbjct: 124 AIVADLRTYPELEQQIHFCIEDSGEVADRASDALLGIRQQQRQVRSQILDRLNRLLRNQS 183
Query: 193 NESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARA 249
N L +S R + A Q + G++ SS GS IEP + LN++L+Q +
Sbjct: 184 NLFQELVISRRSDRYVLPVKAGQKEAVPGIVHDSSSSGSTLYIEPRGVIELNNQLRQLQR 243
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
E V L+E + ++E +L LD+ ARA Y L P
Sbjct: 244 REEVECEAVRRRLSEAIASVSGDLETLLAIATTLDLAVARARYGLHLEANRPRF------ 297
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+SSE +I L + HPLLL Q +Q ++
Sbjct: 298 ------------TASSE---SICLRQLRHPLLLWQQRQDPDRSV---------------- 326
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VP+ + +V+ ITGPNTGGKT+ LK++
Sbjct: 327 -----------------------------VPVSFQLQPSLKVVAITGPNTGGKTVTLKSL 357
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ--S 487
GLA +MA++GL + + E +PWF+ + DIGDEQSL QSLSTFSGH+++IG I+
Sbjct: 358 GLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIGRILEALPV 417
Query: 488 TSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 547
SLVLLDE+GAGT+P EG+AL ++LL A+ +L TIATTH+GELK LKY +D FEN
Sbjct: 418 AGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATL-TIATTHYGELKALKYQDDRFEN 476
Query: 548 ACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGAASAEINEVII 606
A +EFD+ L PTY++LWG+PGRS+A+ IAERLGL P +V + QL G +++ VI
Sbjct: 477 ASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGRDRDVDAVIA 536
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI-- 664
+E + E A L + LH L ++ E Q R+ Q+++ + I
Sbjct: 537 GLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELRER--EQSLRQQQEVAIQSEIEQ 594
Query: 665 ARSLVHKSAQQL--CPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
AR V K ++L P A++A +RA+Q AS++L + Q
Sbjct: 595 ARQRVAKVVRRLQQGPKATKA-----ERARQ----ASETLK-------------SLSQPA 632
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
V V P P +GD + + GK G V+ + P ++E+ V+
Sbjct: 633 VTVVAPPPGFQ------------------PQLGDRLRIPRLGKVGEVLAIAPDRQELTVR 674
Query: 783 VGNMKWIMKFTDI 795
G +K + + D+
Sbjct: 675 CGILKLTVSYGDV 687
>gi|318042364|ref|ZP_07974320.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0101]
Length = 861
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 251/808 (31%), Positives = 367/808 (45%), Gaps = 174/808 (21%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW +L V+ FA T+ GR +L + + + + S LL +T + +
Sbjct: 56 IQIEALELLEWRRLGEHVAGFAGTTAGR--SLCRELPLAPSLKASQELLAQTAELLALDG 113
Query: 109 HGSCSLDLTGV----------------------DLSLVKSAIREVRRA---SPLRPNEAL 143
L GV D++ + R +RR + LRP
Sbjct: 114 LTEGGLSFQGVADLRRTVQLCAKGGVAGADELLDVATTLATARRLRRQIDDAELRPVTTA 173
Query: 144 AVVALLQFSETLQLSLRAAIKEDADLYIRFM-PLTQMLYQLMDMLIRNENNESL------ 196
V L E L+ LR I++ + R PL Q+ Q+ R E + L
Sbjct: 174 MVEGLRTLPE-LEQRLRFCIEDGGRVADRASSPLAQLRRQIASA--RQERRDRLNDLLRR 230
Query: 197 ---FLEVSSI---HGR--LCIRTG-ADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQ 245
L+ S I +GR L ++ G A QL GL+ SS GS IEP + +PL + L+
Sbjct: 231 YAALLQDSVIAERNGRPVLAVKAGLAGQLP--GLVHDSSASGSTVFIEPQAVIPLGNRLR 288
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFL 305
Q +AE VL L+ + + +E + ++QLD ARA Y G P
Sbjct: 289 QLEGEAREAERAVLQELSALVGDEQAALEHLQQVLLQLDAALARARYGAWLGAVRPE--- 345
Query: 306 PQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRR 365
L +P+ + L HPLLL Q ++
Sbjct: 346 -------LVADPLAP----------LRLEGLRHPLLLWQERR------------------ 370
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTI 424
E HPV P+ + + RV+ ITGPNTGGKT+
Sbjct: 371 ----------------------------EGTHPVVPVSVRVHEGLRVVAITGPNTGGKTV 402
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI- 483
LK+VGLA +MA++GL + S ++PW V ADIGDEQSL Q+LSTFSGH+++I I
Sbjct: 403 TLKSVGLAALMARAGLFLPCSGTPQLPWCAQVLADIGDEQSLQQNLSTFSGHVRRIARIL 462
Query: 484 ---------ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 534
+ + SLVLLDE+GAGT+P EGTAL ++LL AE + LTIATTH GE
Sbjct: 463 EALPPAAADLGAAPGASLVLLDEVGAGTDPTEGTALAIALLRQLAER-ARLTIATTHFGE 521
Query: 535 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 594
LK LKY++ FENA + FD L PTY + WG+PGRS+A+ IA RLGL G V++ A+QL
Sbjct: 522 LKALKYNDARFENASVAFDVETLSPTYHLQWGIPGRSNALAIASRLGLDGQVLEEAQQLL 581
Query: 595 GA-ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFR 653
E+N+VI +E + + E EA L + LH+ LL QR++
Sbjct: 582 APRGEGEVNQVIAGLENQRQKQQEAAEEAAALLARTELLHEELL------------QRWQ 629
Query: 654 KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHV 713
+ QK A L + QQL S + V + ++LR + V
Sbjct: 630 Q-QKEQSA-----ELQEQRRQQLERSIRDGQKEVRRIIRRLR-------------QGHDV 670
Query: 714 LTSNFQQTTVDKVEHPATASSSVVKDIKQS--PRVKRTE----LPNVGDLVHVSSFGKKG 767
T++ +T A + +K ++Q P+ +R + P +GD V V S GK G
Sbjct: 671 DTTSLGET--------ARRAGQRLKSLEQQHRPQPERRDHKGWRPALGDRVRVLSLGKAG 722
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+ + E+ V+ G M+ ++ + I
Sbjct: 723 EVLALSADGRELTVRCGVMRLNLELSAI 750
>gi|56750922|ref|YP_171623.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 6301]
gi|56685881|dbj|BAD79103.1| DNA mismatch repair protein MutS [Synechococcus elongatus PCC 6301]
Length = 796
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 240/793 (30%), Positives = 368/793 (46%), Gaps = 158/793 (19%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
V E+L +LEW LC V+SFA T+L R A + + +Q +S LL +T A ++
Sbjct: 7 VEQEALELLEWPLLCQQVASFAATALARRAARSLPLASSQA--ESEYLLSQTAEAQALEL 64
Query: 109 HGSCSLDLTGV----------------------DLSLVKSAIREVRR---ASPLRPNEAL 143
L GV ++ +A+R++RR A+ P
Sbjct: 65 TLPQGLPFAGVFDIGEALARVERQAVLSGEELLQIASTLAAMRQLRRLIDAAEAAPT-LQ 123
Query: 144 AVVALLQFSETLQLSLRAAIKEDADLYIR-----------FMPLTQMLYQLMDMLIRNEN 192
A+VA L+ L+ + I++ ++ R + + ++ L+RN++
Sbjct: 124 AIVADLRTYPELEQQIHFCIEDSGEVADRASDALLGIRQQQRQVRSQILDRLNRLLRNQS 183
Query: 193 NESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARA 249
N L +S R + A Q + G++ SS GS IEP + LN++L+Q +
Sbjct: 184 NLFQELVISRRSDRYVLPVKAGQKEAVPGIVHDSSSSGSTLYIEPRGVIELNNQLRQLQR 243
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
E V L+E + ++E +L LD+ ARA Y L P
Sbjct: 244 REEVECEAVRRRLSEAIASVSGDLETLLAIATTLDLAVARARYGLHLEANRPRF------ 297
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+SSE +I L + HPLLL Q +Q ++
Sbjct: 298 ------------TASSE---SICLRQLRHPLLLWQQRQDPDRSV---------------- 326
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VP+ + +V+ ITGPNTGGKT+ LK++
Sbjct: 327 -----------------------------VPVSFQLQPSLKVVAITGPNTGGKTVTLKSL 357
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ--S 487
GLA +MA++GL + + E +PWF+ + DIGDEQSL QSLSTFSGH+++IG I+
Sbjct: 358 GLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIGRILEALPV 417
Query: 488 TSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 547
SLVLLDE+GAGT+P EG+AL ++LL A+ + LTIATTH+GELK LKY +D FEN
Sbjct: 418 AGASLVLLDEVGAGTDPSEGSALAIALLRYLADHAT-LTIATTHYGELKALKYQDDRFEN 476
Query: 548 ACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGAASAEINEVII 606
A +EFD+ L PTY++LWG+PGRS+A+ IAERLGL P +V + QL G +++ VI
Sbjct: 477 ASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGRDRDVDAVIA 536
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI-- 664
+E + E A L + LH L ++ E Q R+ Q+++ + I
Sbjct: 537 GLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELRER--EQGLRQQQEVAIQSEIEQ 594
Query: 665 ARSLVHKSAQQL--CPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
AR V K ++L P A++A +RA+Q AS++L + Q
Sbjct: 595 ARQRVAKVVRRLQQGPKATKA-----ERARQ----ASETLK-------------SLSQPA 632
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
V V P P +GD + + GK G ++ + P ++E+ V+
Sbjct: 633 VTVVAPPPGFQ------------------PQLGDRLRIPRLGKVGEILAIAPDRQELTVR 674
Query: 783 VGNMKWIMKFTDI 795
G +K + + D+
Sbjct: 675 CGILKLTVSYGDV 687
>gi|33866463|ref|NP_898022.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
WH 8102]
gi|33633241|emb|CAE08446.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 8102]
Length = 812
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 230/689 (33%), Positives = 334/689 (48%), Gaps = 124/689 (17%)
Query: 33 FCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQD 92
F T A D + E+L +LEW ++C ++SFA T +GR+A + + +T +
Sbjct: 7 FLPTAA--DPTKGIDQAFQETLELLEWPRVCDHLASFASTRMGRDAARNLV--LPETLEA 62
Query: 93 SLRLLDET--NAAIEMQKHGSCSL----DLTGVDLSLVK----------------SAIRE 130
S + L ET A ++ G S DLT V L K +A R
Sbjct: 63 SRQRLAETVEMAVLDDLTEGGLSFRGVQDLTPVLLRCSKGGVATGEELLAVAETLAAARR 122
Query: 131 VRR---ASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF-MPLTQMLYQLMDM 186
+RR LRP + + ++ E L+ L+ +I+E + R PL + Q +
Sbjct: 123 LRRQIDEPELRPACSALIDTMVTLPE-LEQRLKFSIEEGGRIADRASAPLAWLRQQWHGL 181
Query: 187 LIRNENNESL---------FLEVSSI---HGR--LCIRTGADQLSFKGLLLSSSGIGSVI 232
R E + L FL+ S I HGR L ++ GA G + SS GS +
Sbjct: 182 --RQERRDKLQDLLRRLAPFLQDSVIAQRHGRPVLAVKAGA-VAQVPGQVHDSSASGSTV 238
Query: 233 --EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARA 290
EP S + + + L + E VL+ L+ + D + ++++ ++QLD+ AR
Sbjct: 239 FVEPRSVLTIGNRLTDLEGRIRDEERKVLIELSAVVADDHPVLLQLVSILLQLDLALARG 298
Query: 291 TYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQ 350
Y GGT+P + + ++ R T+ HPLL+ QHK+
Sbjct: 299 RYGRFLGGTAPRM---------------EASAAAPFRFETLR-----HPLLVWQHKR--- 335
Query: 351 QAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTR 410
GG A VPI + ++ R
Sbjct: 336 ------------------AGGPAV------------------------VPISMEVSVDLR 353
Query: 411 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSL 470
V+ ITGPNTGGKT+ LK++GLA +MA++GL + + +PW V ADIGDEQSL QSL
Sbjct: 354 VVAITGPNTGGKTVTLKSIGLASLMARAGLLLPCAGMPTLPWCAQVLADIGDEQSLQQSL 413
Query: 471 STFSGHLKQIGNIIS---QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTI 527
STFSGH+K+IG I+ S +LVLLDE+GAGT+P EGTAL SLL+A A+ + LTI
Sbjct: 414 STFSGHIKRIGRILEALQSGPSPALVLLDEVGAGTDPSEGTALATSLLKALADR-ARLTI 472
Query: 528 ATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVV 587
ATTH GELK LKY++ FENA + F+ L PTY++LWG+PGRS+A+ IA RLGL V+
Sbjct: 473 ATTHFGELKALKYNDARFENASVAFNAETLSPTYELLWGIPGRSNALAIASRLGLDDQVL 532
Query: 588 QNARQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEH 646
+ A QL AA E+N VI +E + + +A L + LH LL+ +K +
Sbjct: 533 EEASQLLAPAADGEVNSVIRGLEEQRQRQQAAAEDAAALLARTELLHDELLQRWQKQKQQ 592
Query: 647 CASQ----RFRKVQKISDAAAIARSLVHK 671
A + R R + I D RSL+ +
Sbjct: 593 SAERQEQGRQRLERSIRDGQKEVRSLIRR 621
>gi|218248506|ref|YP_002373877.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8801]
gi|218168984|gb|ACK67721.1| MutS2 family protein [Cyanothece sp. PCC 8801]
Length = 830
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 236/821 (28%), Positives = 373/821 (45%), Gaps = 185/821 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG + Q SI ++S +LL +T ++++
Sbjct: 5 ETLELLEWSRLCQHLATFAATKLG--SLSAQKLSIPTNIEESKQLLAQTQEIYRLEQNLD 62
Query: 112 C--SLD-----------------LTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQ- 150
S D L+G +L + + + VRR + N E ++A L
Sbjct: 63 IKWSFDGINDIGDSLERAQLGGMLSGQELLNIATTLAGVRRLRRIIENQEDFPILAELVE 122
Query: 151 ---------------FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNES 195
E +++ RA++K ++ + + Q + +I+ +
Sbjct: 123 DVRTYPEIEQNIYHCIDEAGKVADRASVKL-GEIRRHLKDIRDRIVQKLQNIIQRQGGAI 181
Query: 196 LFLEVSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
++ R I A Q G++ SS G+ IEP S V ++ +Q
Sbjct: 182 QEPVITQRGDRFVIPVKAPQKDQIPGIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQ 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
EE +L L+ ++ D+++ +L LD+ A+A YSL G +P F+ D
Sbjct: 242 VEEEAILRKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAPR-FINFDQTEL 300
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
+T L + HPLL+ Q K
Sbjct: 301 IT------------------LRQLRHPLLVWQQKH------------------------- 317
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPV-PIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
E PV PI++ + K RV+ ITGPNTGGKT+ LKT+GL
Sbjct: 318 ---------------------EQGVPVVPINVQVDPKIRVVAITGPNTGGKTVTLKTIGL 356
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI----------- 480
A +MAK GL I + E ++PWF+ V ADIGDEQS+ QSLSTFSGH+++I
Sbjct: 357 AALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRIVRITEGLGNQE 416
Query: 481 ---------GNIISQSTSQ-----------------SLVLLDEIGAGTNPLEGTALGMSL 514
GN Q +S+ +LVLLDE+GAGT+P EG+AL ++L
Sbjct: 417 DQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLVLLDEVGAGTDPAEGSALAIAL 476
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L A+ +LLTIATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS+A+
Sbjct: 477 LNYLADH-ALLTIATTHYGELKALKYQDSRFENASVEFDDQTLSPTYRLLWGIPGRSNAL 535
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA+RLGL +VQ A+ G S EIN+VI +E + + + EA+ L + +
Sbjct: 536 IIAQRLGLNLEIVQEAKTRIGGFSEEINQVIAGLEAQRREQEQKALEAKQLLQKTEKFYT 595
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ + + + + Q++ A A A+ + + +QL Q S ++AQQ
Sbjct: 596 EVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEIAQVIRQL-----QQGSQTAQKAQQ- 649
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
A+++L QH L P T P+ + + P V
Sbjct: 650 ---ATEALDQI----TQHQL--------------PKT------------PKKQASYQPKV 676
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ + +S+ G+ V++++ + + V+ G MK + T+I
Sbjct: 677 GERIRLSNLGQTAEVLEIDEEAQALTVRFGLMKMTVALTEI 717
>gi|317968912|ref|ZP_07970302.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0205]
Length = 811
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 257/803 (32%), Positives = 369/803 (45%), Gaps = 170/803 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK--- 108
E+L +LEW +L VSSFA T+ GR + + T Q S+ L ET + +
Sbjct: 12 EALELLEWPRLAQHVSSFASTAAGR--VVAARLPLATTRQQSVDWLAETTELLALDGLIE 69
Query: 109 -----HGSCSLDLT-----------GVDLSLVKS---AIREVRRA---SPLRPNEALAVV 146
G+ LD T G DL V + A R +RR LRP A+V
Sbjct: 70 GGLSFQGAADLDHTLQLCAKGGVASGDDLLSVATTLAAARRLRRQIDYPELRPVTT-ALV 128
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMP-LTQMLYQL--MDMLIRNENNE-----SLFL 198
L+ L+ LR I++ + R P L+ + QL + M R+ NE + L
Sbjct: 129 EPLRTLPELEQRLRFCIEDGGRVADRASPPLSGLRRQLASVRMERRDRLNELIRRYAALL 188
Query: 199 E---VSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASV 251
+ V+ +GR L ++ GA GL+ SS GS IEP + +PL + ++Q
Sbjct: 189 QDTVVAERNGRPVLAVKAGAGS-QLPGLVHDSSASGSTVFIEPQAVIPLGNRIRQLEGEE 247
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKR 311
+AE VL L+ + + +E + +IQLD+ ARA YS G P
Sbjct: 248 REAERAVLQELSALVGEEQPALEHLQQVLIQLDLALARARYSAWLGAVRPE--------- 298
Query: 312 SLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGG 371
L +P+ + L HPLLL Q +++ GG
Sbjct: 299 -LEADPLAP----------LQLEGLRHPLLLWQERRQ---------------------GG 326
Query: 372 NAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGL 431
VP+ I + RV+ ITGPNTGGKT+ LK+VGL
Sbjct: 327 RTV------------------------VPVTIRVESSLRVVAITGPNTGGKTVTLKSVGL 362
Query: 432 AVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII------- 484
AV+MA++GL + VPW V ADIGDEQSL Q+LSTFSGH+++I I+
Sbjct: 363 AVLMARAGLFVPCKGSPHVPWCQQVLADIGDEQSLQQNLSTFSGHVRRIARILEALPAAG 422
Query: 485 ----SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 540
+Q+ +Q LVLLDE+GAGT+P EGTAL ++LL+ A+ + LTIATTH GELK LKY
Sbjct: 423 SDLATQAGAQ-LVLLDEVGAGTDPTEGTALAIALLKQLADR-ARLTIATTHFGELKALKY 480
Query: 541 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA-ASA 599
+ FENA + FD L PTY + WG+PGRS+A+ IA RLGL G V+ A+ L
Sbjct: 481 DDPRFENASVAFDVESLSPTYHLQWGIPGRSNALAIATRLGLDGAVLDAAQALLAPRGEG 540
Query: 600 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCA---SQRFRKVQ 656
E+N+VI +E + + E EA L + LH+ LL ++ E A QR +++
Sbjct: 541 ELNQVIAGLESQRQRQQEAAEEAAALLARTELLHEELLMRWQQQKEQSAELQEQRREQLE 600
Query: 657 K-ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA---QQLRPSASQSLHCTKVGKNQH 712
+ I D R ++ R L H R +L SA ++ K + QH
Sbjct: 601 RSIRDGQKEVRRII--------------RRLRHGRGTGSSELGESARRAGQQLKQLEQQH 646
Query: 713 VLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKV 772
+ ++ +H + LP VGD V V S GK G V+ +
Sbjct: 647 -------RPLPERRDH-------------------KGWLPKVGDRVRVLSLGKAGEVLSL 680
Query: 773 EPSKEEIVVQVGNMKWIMKFTDI 795
E+ V+ G M+ ++ + I
Sbjct: 681 SEDGRELSVRCGVMRLNLELSAI 703
>gi|411117308|ref|ZP_11389795.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713411|gb|EKQ70912.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
Length = 865
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 237/849 (27%), Positives = 366/849 (43%), Gaps = 219/849 (25%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +S+FA T LG A Q I +L LL +T +++ S
Sbjct: 5 ETLELLEWSRLCQHLSTFAATKLG--AIAAQNLKIPTHRDQTLDLLAQTQEVYDLESRPS 62
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNEALAVVALL 149
L+ G+D ++ + R +RR P E + L+
Sbjct: 63 GGLNFDGIDDIGEPLERAGLGGILTGKELLSIATTLAGARTLRRTIDNYP-EFTVLNNLI 121
Query: 150 QFSET---LQLSLRAAIKEDADLYIR-----------FMPLTQMLYQLMDMLIRNENNES 195
Q T L+ + I + D+ R + +Y ++ +++ + +
Sbjct: 122 QDLRTYPELEQDIHHCIGDHGDVLERASLKLGNIREQLKQVRDRIYSILHSILQRKAHAI 181
Query: 196 LFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
++ GR + A Q + G++ S SG IEP SAV LN++L+Q +
Sbjct: 182 QEHVITQRSGRFVLPVKAPQKDAIPGIVHDTSMSGATLYIEPQSAVNLNNQLRQLQRQEQ 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
EE + L++K+ ++E+++ + LD+ ARA YS G P
Sbjct: 242 VEEEAIRQRLSKKVADVKPDLERLMAIVTTLDLATARARYSDWLGANPPRF--------- 292
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKLYG 370
P +S +I L + HPLL+ +QH+Q
Sbjct: 293 ----PNSSS--------SIVLRQLRHPLLVWQEQHEQ----------------------- 317
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
G A VPID+ I + RV+ ITGPNTGGKT+ LKT G
Sbjct: 318 GKAV------------------------VPIDLVIQPQIRVVAITGPNTGGKTVTLKTFG 353
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII------ 484
+A +MAK GL + + E A++PWFD + ADIGDEQSL QSLSTFSGH+++I I+
Sbjct: 354 IAALMAKVGLFVPAKEPAELPWFDQILADIGDEQSLQQSLSTFSGHIRRISRILEALEGQ 413
Query: 485 ----------------------------------------SQSTSQSLV----------- 493
S + QSL+
Sbjct: 414 KQEQEPEVRSQEPGDSNQGGYRVLGMDSPQPPIPNPYFPSSATKLQSLIPNPQSPVPLSL 473
Query: 494 -LLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
LLDE+GAGT+P EG+AL ++LL+ A+ LTIATTH GELK LKY + FENA +EF
Sbjct: 474 VLLDEVGAGTDPSEGSALAIALLKYLADHAG-LTIATTHFGELKALKYQDPRFENASVEF 532
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D+V L PTY++LWG+PGRS+A+ IA RLGL +++ A+ G A+ ++N VI +E +
Sbjct: 533 DDVSLSPTYRLLWGIPGRSNALAIASRLGLKDTIIEAAKTYVGGATQDVNTVIAGLEEQR 592
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKS 672
Q EA L + L++ + R + E + + Q + +A A A+ + +
Sbjct: 593 RQQETRSQEAEKLLKHAERLYQEVSRKAASLQEREKALHLGQEQAVQEAIAQAKRDIAQV 652
Query: 673 AQQL------CPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKV 726
+QL +A QA +++ ++Q PS Q
Sbjct: 653 IRQLQQGPQTAQAAQQATEALNQISEQYLPSRQQ-------------------------- 686
Query: 727 EHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNM 786
P+ K P VGD + + G+ V+ + + +EI V+ G M
Sbjct: 687 ----------------QPKPKSGFCPQVGDRIRIPRLGQTAEVLSIPDANDEITVRFGLM 730
Query: 787 KWIMKFTDI 795
K + D+
Sbjct: 731 KMTVSLQDV 739
>gi|113476819|ref|YP_722880.1| recombination and DNA strand exchange inhibitor protein
[Trichodesmium erythraeum IMS101]
gi|110167867|gb|ABG52407.1| MutS2 family protein [Trichodesmium erythraeum IMS101]
Length = 857
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 236/844 (27%), Positives = 384/844 (45%), Gaps = 214/844 (25%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A SI T +++ LL +T +++
Sbjct: 5 ETLELLEWPRLCQHLATFTGTKLG--AVTASHLSIPLTRTETIHLLAQTQEVYKLETLLV 62
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRRASPLRPNE-ALAV--- 145
L G++ ++ + +R++RRA +E L+V
Sbjct: 63 QGLSFDGIEDISGSLKRSELGGILSGYELLAIATTLAGVRKLRRAIDSYESEYELSVLPE 122
Query: 146 -VALLQFSETLQLSLRAAIKEDADLYIRFMP----LTQMLYQLMDML-------IRNENN 193
VA ++ L+ + I + D+ R P + + +++L D + ++ + N
Sbjct: 123 LVADMRTYPELEQEIHRCIDDRGDVTDRASPKLAGIREKIHRLRDRIDNILRGILQRKAN 182
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARAS 250
++ R I A Q + G++ +S GS IEP + V LN++++Q +
Sbjct: 183 AIQQPIITQRDDRFVIPVKAPQKDAVPGIVHDTSTTGSTLYIEPNAVVNLNNQMRQLQRQ 242
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ EE + ALT+K+ ++++++L +D+ ARA YSL T P F D +
Sbjct: 243 AQREEEAIRQALTQKVAEVKEDLDQLLAITTIIDLATARARYSLWLEATPPQ-FTDLDSE 301
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL--QQHKQKTQQAWKDLESANTELRRRKL 368
+ +T + + HPLL+ QQ++QK
Sbjct: 302 QPMT------------------MGQLRHPLLVWQQQYEQKN------------------- 324
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
VPID+ + RV+ ITGPNTGGKT+ LKT
Sbjct: 325 ----------------------------SVVPIDVKVRPPVRVVAITGPNTGGKTVTLKT 356
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI-------- 480
+GLA +MAK GL I +++ K+PWF+ + ADIGDEQSL QSLSTFSGH+++I
Sbjct: 357 LGLAALMAKVGLFIPANDPVKLPWFEQILADIGDEQSLEQSLSTFSGHIRRIIRILEAID 416
Query: 481 ---GNIISQ--------------------------------------STSQSLVLLDEIG 499
NIISQ + S +LVLLDE+G
Sbjct: 417 VSKANIISQKLKVKTQNSKVIDSDDFSENENNSEIDNLSGNENLESSNLSSTLVLLDEVG 476
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG+AL +SLL+ A++ +LLT+ATTH GELK LKY ++ FENA +EFD L+P
Sbjct: 477 AGTDPTEGSALAISLLQYLADN-ALLTVATTHFGELKALKYEDERFENASVEFDSNSLQP 535
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TY++LWG+PGRS+A+ IA RLGL ++ A+ G +S ++N+VI +E + +
Sbjct: 536 TYRLLWGIPGRSNAMTIAGRLGLKQDIIDRAQDYVGDSSEDVNQVIAGLEEQRQKQETKA 595
Query: 620 HEARHFLMLSRNLHKNLLRT----RRKILEHCASQRFRKVQKISDAAA-IARSLVHKSAQ 674
EA L + +LH+ + R + + E +Q +KI++A A IAR V ++ Q
Sbjct: 596 KEASALLQETESLHQEVARKASALKERERELKLAQEVAVQEKIAEAKAEIAR--VIRNLQ 653
Query: 675 Q---LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT 731
Q +A +A + +++ +++ PSA+
Sbjct: 654 QGPLTARNAQKATNAINEISEKYLPSAT-------------------------------- 681
Query: 732 ASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P K +P GD + + G+ V+ +E+ V+ G MK +
Sbjct: 682 -----------PPPKKPGFMPKEGDRIRIPKIGQIAEVLSAPNENDELTVKFGVMKMTVN 730
Query: 792 FTDI 795
++
Sbjct: 731 LREV 734
>gi|254425115|ref|ZP_05038833.1| MutS2 family protein [Synechococcus sp. PCC 7335]
gi|196192604|gb|EDX87568.1| MutS2 family protein [Synechococcus sp. PCC 7335]
Length = 798
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 229/801 (28%), Positives = 373/801 (46%), Gaps = 171/801 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T++G A L I+Q ++L L +T A +++ S
Sbjct: 5 ETLTLLEWPRLCRHLATFTATNIGNVAAQRLLIPISQAESEAL--LSQTTEATQLEST-S 61
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAVV-AL 148
L G+ D++ + R +RR + E L V+ AL
Sbjct: 62 AGLQFGGIRDIGVALERSRLQGILSGDELLDIATTLAGARRLRRQ--IDAQEDLPVLQAL 119
Query: 149 LQFSETL---------------QLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENN 193
++ T Q++ RA+ K ++ + + +Y + +I+ +
Sbjct: 120 VEDLRTFPELEQEIHRCIDDRGQVADRASTKL-GNVRQQLKVIRDRIYSKLQRIIQRQGG 178
Query: 194 ESLFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARAS 250
++ + R + A Q + G++ +S+SG +EP S V ++ + R
Sbjct: 179 ALQEALITQRNDRFVLPVKAAQKDAVPGIVHDVSTSGSTLYVEPHSIVDNGNKRRALRKE 238
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
E + LT ++ ++E ++ I++LD+ ARA Y L G +P F+ Q+
Sbjct: 239 EEVESEAIRQMLTYQVAEAFPDLEHLMITIVKLDLAAARARYGLWMEGNAPR-FVNQEQ- 296
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLY 369
I L + HPLLL QQ K++ +
Sbjct: 297 --------------------ITLRQLTHPLLLWQQEKEQKDKV----------------- 319
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
VP D+ + + RV+ ITGPNTGGKT+ LKT+
Sbjct: 320 -----------------------------VPTDLVMRPELRVVAITGPNTGGKTVTLKTL 350
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS---- 485
GL +MAK G+ I + E ++PWFDSV ADIGDEQS+ QSLSTFSGH+K+IG I+
Sbjct: 351 GLTALMAKVGMFIPAKEPVELPWFDSVLADIGDEQSIEQSLSTFSGHVKRIGRILDTIDE 410
Query: 486 ----QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
+ SLVLLDE+GAGT+P EG+AL ++LL+ A + + LT+ATTH+GELK+LKY
Sbjct: 411 LKGENEVANSLVLLDEVGAGTDPSEGSALAIALLKHLA-NNTRLTVATTHYGELKSLKYE 469
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
++ FENA +EFD+ KL PTY++LWG+PGRS+A++IA RLGL V++ A+ G + +
Sbjct: 470 DERFENASVEFDDEKLAPTYRLLWGIPGRSNALSIARRLGLKHSVLEQAKAQMGGTNDNV 529
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL------LRTRRKILEHCASQRFRKV 655
N VI +E + + + EA + + +K + LR R Q+ ++
Sbjct: 530 NTVIEGLEAQRQKQEKRAAEAEKLVARAEKFYKEVEARAQSLRDR--------EQKLKRQ 581
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLT 715
Q+ S + SL+H AR+ V K + L+ + +
Sbjct: 582 QEKS----VETSLLH------------ARAEVAKVIRDLQKGGLTGQDAQRATEE----L 621
Query: 716 SNFQQTTVDKVEHPATASSSVVKDIKQSPRV-KRTELPNVGDLVHVSSFGKKGTVIKVEP 774
+ ++ + +HPA S+ D P+V +R L ++G+ V VI+
Sbjct: 622 NRIEEKRLPTGDHPAKVKSA---DTGYRPKVSERVRLASLGNQV--------AEVIEEAD 670
Query: 775 SKEEIVVQVGNMKWIMKFTDI 795
++ V+ G MK + +DI
Sbjct: 671 DDGKVAVRFGLMKMTVDLSDI 691
>gi|148241412|ref|YP_001226569.1| mismatch repair ATPase [Synechococcus sp. RCC307]
gi|147849722|emb|CAK27216.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. RCC307]
Length = 793
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 236/792 (29%), Positives = 354/792 (44%), Gaps = 159/792 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLG------------------REATLTQLWSINQTYQDS 93
E+L +LEW++L V+ FA + LG R+ T+L ++ +
Sbjct: 6 ETLALLEWERLGEQVAGFAGSCLGANLCRPLQLAPTLEEAQRRQTETTELLVLDGLTEGG 65
Query: 94 LRLLDETNAAIEMQ--KHGSCSLDLTGVDLSLVKSAIREVRRA---SPLRPNEALAVVAL 148
L ++ +I +Q G C+ + L+ +A R +RR LRP AL
Sbjct: 66 LSFQGVSDHSITVQLCSKGGCAGADELLQLADTLAAARRLRRQIDDDELRP----VTTAL 121
Query: 149 LQFSETL---QLSLRAAIKEDADLYIRFMP-LTQMLYQL----------MDMLIRNENNE 194
L+ TL + LR AI+E + R P L + QL + L+R N+
Sbjct: 122 LEGLRTLPELEQQLRFAIEEGGRVADRASPPLAGLRRQLQSQRQERQSRLQELMRRWANQ 181
Query: 195 SLFLEVSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARAS 250
++ HGR L ++ GA S +G + SS G+ IEP + V L + + + A
Sbjct: 182 LQDSVIAQRHGRPVLAVKAGAAG-SLQGQVHDSSASGNTLFIEPQAVVGLGNRIAELEAQ 240
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
K E VLL L+ + + D + M + + QLD+ ARA Y G P +
Sbjct: 241 EQKEERRVLLQLSAAVAAEGDSLMAMQDCLAQLDLGLARARYGAWLGAIKPKL------- 293
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYG 370
W L HPLL+ W++ + A T +
Sbjct: 294 --------------GTESW--QLKDLRHPLLV----------WQERQEAGTAV------- 320
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
VP+ + I RV+ ITGPNTGGKT+ LK++G
Sbjct: 321 ----------------------------VPVSLQIEPPLRVVAITGPNTGGKTVTLKSLG 352
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI------I 484
LA +MA+SGL + S ++PW ++V ADIGDEQSL Q+LSTFSGH+++I I +
Sbjct: 353 LATLMARSGLFLPCSGTPQLPWCEAVLADIGDEQSLQQNLSTFSGHVRRIARILEALSRL 412
Query: 485 SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
+ +LVLLDE+GAGT+P EG AL +LL A+ L++ATTH GELK LKY +
Sbjct: 413 GAAPVPALVLLDEVGAGTDPSEGAALATALLRHLADQ-VQLSVATTHFGELKALKYDDSR 471
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA-ASAEINE 603
FENA +EFDEV L+PTY++LWG+PGRS+A+ +A RLGL V+ A QL ++ +N
Sbjct: 472 FENASVEFDEVSLRPTYRLLWGIPGRSNALAVARRLGLSEAVLGGAEQLMDEQGTSSVNT 531
Query: 604 VIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
VI +E + + E EA LM + LH+ L Q+
Sbjct: 532 VISGLEEQRQRQQEAAEEAAALLMRAELLHEEL------------------QQRWQQEQQ 573
Query: 664 IARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTV 723
++ ++ QQL S + R V + ++LR + +VG+ L +
Sbjct: 574 QKQARQGEAQQQLVGSIREGRKEVRQLIRRLRNPKADGEAARQVGQRLRSLEQEHAPESR 633
Query: 724 DKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQV 783
+ +H R P GD V + S GK V+ +E+ V+
Sbjct: 634 PQRQH-------------------RGWSPAAGDRVRLLSLGKAAEVLSCSDDGQELQVRC 674
Query: 784 GNMKWIMKFTDI 795
G M+ + T I
Sbjct: 675 GVMRLTVPLTGI 686
>gi|449457723|ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 890
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 245/808 (30%), Positives = 377/808 (46%), Gaps = 159/808 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+LRVLEW +C +S F TS+G + +T ++S +LLD+T AA E S
Sbjct: 47 ETLRVLEWSSICKQLSKFTSTSMGFDVAQKADVRFGRTREESQKLLDQTTAA-EAVVSTS 105
Query: 112 CSLDLTGV-DLS-LVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
LD +G+ D+S ++ SAI + L + L TL+ + R +E L
Sbjct: 106 RRLDFSGIEDVSGILNSAI----------SGKLLTIAELCSVRRTLKAA-RELFEELQAL 154
Query: 170 YI------RFMPLTQMLYQLMDMLI---------------------------------RN 190
+ RF+PL ++L Q D L+ RN
Sbjct: 155 AVGNHYSDRFLPLIEIL-QNCDFLVELERKIEFCIDCNYSIILDRASEDLELIRLEKKRN 213
Query: 191 -ENNESLFLEVS---------------SIHGRLCI--RTGADQLSFKGLLLSSSGIGSV- 231
E +SL EVS R+C+ R L G+LLS+S G+
Sbjct: 214 MEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMCVAVRATHKNLVSDGILLSTSSSGATY 273
Query: 232 -IEPLSAVPLNDELQQARASVTKAEE-DVLLALTEKMQVDLDEIEKMLNGIIQLDVVNAR 289
+EP +AV LN+ ++ ++ KAEE +L L+ ++ + I +L+ I++LD+ AR
Sbjct: 274 FMEPKNAVDLNN-MEVRLSNSEKAEEISILSMLSTEISESENHIRCLLDKILELDLALAR 332
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y G P + +E + S ++ + ++ + +PLLL + +K
Sbjct: 333 AAYGRWMSGVCPCF-------SAKGYEGLNSSIT--DNTLSVDIDAIQNPLLLSNYLKK- 382
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
+ G S + P+ IDI I +T
Sbjct: 383 -------------------FSG-------------------SVPDFPMPIAIDIKIMHQT 404
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
RV+VI+GPNTGGKT LKT+GLA +MAK+G+++ + + K+PWFD V ADIGD QSL Q+
Sbjct: 405 RVVVISGPNTGGKTASLKTLGLASLMAKAGMYLPAKNHPKLPWFDLVLADIGDHQSLEQN 464
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFSGH+ +I I+ S+ +SLVL+DEIG+GT+P EG AL S+L + ++ L I T
Sbjct: 465 LSTFSGHISRICKILEVSSDESLVLIDEIGSGTDPSEGVALSTSILR-YLKNCVNLAIVT 523
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ +L +K S+ FENA MEF LKPTYKILWG G S+A+ IAE +G ++++
Sbjct: 524 THYADLSRIKDSDSSFENAAMEFSLETLKPTYKILWGSTGDSNALTIAESIGFDPVIIER 583
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+Q + E + ER + F K+L+ R K+ +
Sbjct: 584 AKQWMVNLTPERQD-----ERKGSLF------------------KSLIGERDKL----EA 616
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
QR + +D +A+ + + A+ L +L KRAQQ + +
Sbjct: 617 QRQKVASLHADISALYYE-IQEEAKDLDKRERALMALETKRAQQEAAAIKSKIETVVQEF 675
Query: 710 NQHVLTSNFQQ--TTVDKVEHPATASSSVVKDIKQS-PRVKRTE--LPNVGDLVHVSSFG 764
+ + TS Q + + K E + + S P V T P +G+ V V+ G
Sbjct: 676 EEQLKTSGTDQINSLIKKAESAIASICEAYSPTEHSRPSVANTNSYTPQLGEQVFVTGLG 735
Query: 765 KK-GTVIKVEPSKEEIVVQVGNMKWIMK 791
K TV++V +E I+VQ G +K +K
Sbjct: 736 NKLATVVEVSDDEEMILVQYGKIKARVK 763
>gi|443318566|ref|ZP_21047815.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
gi|442781831|gb|ELR91922.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
Length = 786
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 307/605 (50%), Gaps = 113/605 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++F T LG A + + T +S LL +T A +++
Sbjct: 5 ETLALLEWPRLCQHLATFTATKLG--AIAARQLPLPTTQAESEGLLAQTREATQLETRPP 62
Query: 112 C-----------SLD-------LTGVDLSLVKSAI---REVRRASPLRPNEALAV----V 146
SL+ L G +L + + + R++RRA + +A+ V V
Sbjct: 63 GLKFAGIQDIGESLERAVRQGLLGGEELLAIATTVNGARQLRRA--IDGQDAVPVLQGLV 120
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMP-----LTQM------LYQLMDMLIRNENNES 195
A L+ L+ S+ I + A + R P TQ+ +Y + +++ ++
Sbjct: 121 ADLRTYPELEQSIHHCIDDRAQVTDRASPKLGGLRTQIKQCRSEIYAKLQRILQRQSGAI 180
Query: 196 LFLEVSSIHGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
++ R I A Q + G++ S+SG +EP S V + + L+Q +
Sbjct: 181 QEAVITQRGDRFVIPVKAPQKDAIPGIVHDASTSGATLYVEPHSIVEMGNRLRQLQRQEK 240
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
EE + ALT ++ ++E++L + LD+ ARA Y L G +P P + + +
Sbjct: 241 TEEEAICRALTAQVAAVATDLERLLAIVTALDLAAARARYGLWLQGNAPQFITPGE-QTT 299
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
L H HPLL QH + A E+
Sbjct: 300 LRH--------------------LRHPLLWWQHHHE----------AGPEV--------- 320
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
VPID+ + + RV+ ITGPNTGGKT+ LKT+GLA
Sbjct: 321 --------------------------VPIDVVVNPRLRVVAITGPNTGGKTVTLKTLGLA 354
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS--QSTSQ 490
+MAK+G+++ + E ++PWFD V ADIGDEQS+ QSLSTFSGH+K+I +++ ++
Sbjct: 355 ALMAKAGMYVPAKEPVELPWFDQVLADIGDEQSIEQSLSTFSGHIKRISRVLAALETEGN 414
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
+LVLLDE+GAGT+P EG+AL ++LL A+ + T+ATTH+GELK LKY +D FENA +
Sbjct: 415 ALVLLDEVGAGTDPSEGSALAIALLRYLADQ-ARFTVATTHYGELKALKYQDDRFENASV 473
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA-EINEVIIEME 609
EFDE L PTY++LWG+PGRS+A+ IA RLGL +V A+ G S ++N+VI +E
Sbjct: 474 EFDENTLSPTYRLLWGIPGRSNALTIARRLGLAAEIVDQAQNYVGLGSGQDVNQVIAGLE 533
Query: 610 RFKTQ 614
+ Q
Sbjct: 534 AQRQQ 538
>gi|255556027|ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
gi|223541711|gb|EEF43259.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
Length = 873
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 243/809 (30%), Positives = 379/809 (46%), Gaps = 167/809 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L+ LEW+ LC +S F TS+G A + I ++ Q+S LLD+T AA+ M ++G+
Sbjct: 49 EALKALEWNSLCDRLSPFTSTSMGHSAARSASIPIGESIQESRMLLDQTTAALAMMQYGT 108
Query: 112 CSL----DLTGVDLSLVKSAIREVRRASPLRPN-EALAVV---------------ALLQF 151
D+TG+ S V + V +R EA V LL+
Sbjct: 109 LDFSAIEDITGIVNSAVSGNLLTVSELCAVRRTLEAAKAVLERLKDGGDCLERSYPLLEI 168
Query: 152 --SETLQLSLRAAI---------------KEDADLYIRFM------PLTQMLYQLMDMLI 188
S LQ+ L I ED +L IR+ L +L + +
Sbjct: 169 FRSCNLQIQLEQKIGFCIDCNLLIILDRASEDLEL-IRYERKKTMENLDNLLKGISTRIF 227
Query: 189 RNENNESLFLEVSSIHGRLCI--RTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDEL 244
+ + F V+ RLC+ R L G++L SG G+ +EP AV LN+ L
Sbjct: 228 QAGGIDRPF--VTKRRSRLCVGVRATHRYLIPDGVILDVSGSGATYFVEPGDAVELNN-L 284
Query: 245 QQARASVTKAEEDVLLAL-TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ ++ +AEE +L+L T ++ +I+K+L+GI+++D+ ARA Y+ G P
Sbjct: 285 EVMLSNSERAEEIAILSLLTSEIAESERDIKKLLDGILEVDLAFARAAYARQINGVCP-- 342
Query: 304 FLPQDMKRSLTHEPVTSKVSS-SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
+ T E + SS + +I + HPLLL +QK
Sbjct: 343 --------TFTSEGYEGEPSSRANYALSIDIEGIQHPLLLGSSQQK-------------- 380
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
PVPI+I + TRV+VI+GPNTGGK
Sbjct: 381 ----------------------------------FPVPINIKVECGTRVVVISGPNTGGK 406
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T +KT+G+A +M+K+GL + + K+PWFD V ADIGD QSL Q+LSTFSGH+ +I
Sbjct: 407 TASMKTLGIASLMSKAGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLSTFSGHISRICK 466
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ ++ +SLVL+DEI +GT+P EG AL S+L+ + + L + TTH+ +L LK S+
Sbjct: 467 ILEVTSKESLVLIDEICSGTDPSEGVALSTSILQYLRDRVN-LAVVTTHYADLSLLKDSD 525
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
FENA MEF L+PTY+ILWG G S+A++IA+ +G +++ A
Sbjct: 526 SQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAKSIGFDSNIIERA------------ 573
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCA-------SQRFRKV 655
E++ + + + R L L+K+L+ R K LE A +Q
Sbjct: 574 ------EKWVEKLIPEKQQHRKGL-----LYKSLMDERNK-LEAQAREAASVHAQIMELY 621
Query: 656 QKISDAAAIARS----LVHKSAQQ----LCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
+I D A S L+ K QQ L + SQ ++VH LR ++ + + +
Sbjct: 622 YEIQDEAGNLDSRIMALMAKETQQVQQELKATKSQIETVVHNFENLLRKASPLQFN-SLI 680
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
K++ + S + + +PA ++ S V + P +G+ VH+ FG K
Sbjct: 681 RKSESAIAS------IVEAHYPA-------DNLPASEDVS-SYTPQLGEQVHLKGFGNKV 726
Query: 768 TVIKVEPSKEE-IVVQVGNMKWIMKFTDI 795
+ P K+E I+VQ G ++ +K +DI
Sbjct: 727 ATVVEAPGKDETILVQYGKIRVRVKKSDI 755
>gi|358346679|ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula]
Length = 913
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 246/812 (30%), Positives = 383/812 (47%), Gaps = 136/812 (16%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
+SL+ LEW+ +C +S+F TS+G A + T S +LLD+T+AA + +
Sbjct: 37 DSLKTLEWNSICKQLSAFTSTSMGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQ-- 94
Query: 112 CSLDLTGV-DLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLR--AAIKEDAD 168
LD +G+ DL+ + S L E V L + L +LR A++ +
Sbjct: 95 -QLDFSGIHDLTDILSV---SVSGKLLTVPELCTVRRTLSSARELFDTLRHLASVSNHSH 150
Query: 169 LYIRFMPLTQMLYQLMDM------------------------LIRNENN------ESLFL 198
Y + + Q LM + +IR+E +SL
Sbjct: 151 RYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLK 210
Query: 199 EVSSI---------------HGRLC--IRTGADQLSFKGLLL--SSSGIGSVIEPLSAVP 239
EVSS R+C IR L +G++L SSSG +EP A+
Sbjct: 211 EVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKEAID 270
Query: 240 LNDELQQARASVTKAEED--VLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 297
LN+ + R S ++A E+ +L L ++ EI +L+ I+++D+ ARA Y+
Sbjct: 271 LNN--MEVRLSNSEAAEERAILSMLASEIANSKSEINYLLDKILEVDLAFARAAYAQWMN 328
Query: 298 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
G P IF ++ + E + + T+ + HPLLL+ +
Sbjct: 329 GVCP-IFSLGTLEVCESVEKDNDISVVQDDDLTVNIEGMRHPLLLESSLENI-------- 379
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
S N LR GNAA G + ++ + PVP+D I TRV+VI+GP
Sbjct: 380 SDNVTLR-----SGNAAELGNGNGTMASKSASQGITDF--PVPVDFKIRSGTRVVVISGP 432
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKT +KT+GLA +M+K+G+H+ + + K+PWFD + DIGD QSL Q+LSTFSGH+
Sbjct: 433 NTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILVDIGDHQSLEQNLSTFSGHI 492
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
+I + ++ QSLVL+DEIG+GT+P EG AL S+L+ E + L + TTH+ +L T
Sbjct: 493 SRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVN-LAVVTTHYADLST 551
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
+K + FENA MEF L+PTY++LWG G S+A++IA+ +G ++ +A++
Sbjct: 552 MKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQSIGFDKNIIDHAQKW---- 607
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 657
+E+ K E E R L S KN L+ + + ++ +
Sbjct: 608 ----------VEKLKP---EQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSE 654
Query: 658 I-SDAAAIARS---LVHKSAQQ----LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
I +A + R L+ K AQQ L + SQ ++ K +QL+ +G+
Sbjct: 655 IQGEAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLK----------DLGR 704
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV-------KRTE--LPNVGDLVHV 760
NQ L S +++ TA +S+VK +P V RT P G+ V V
Sbjct: 705 NQ--LNSIIKES--------ETAIASIVK--AHTPAVGFPINDADRTTSYTPQFGEQVRV 752
Query: 761 SSFGKK-GTVIKVEPSKEEIVVQVGNMKWIMK 791
G K TV+++ E I+VQ G +K +K
Sbjct: 753 KGLGGKLATVVELLGDDETILVQYGKVKVRVK 784
>gi|254432766|ref|ZP_05046469.1| MutS2 family protein [Cyanobium sp. PCC 7001]
gi|197627219|gb|EDY39778.1| MutS2 family protein [Cyanobium sp. PCC 7001]
Length = 804
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 368/800 (46%), Gaps = 157/800 (19%)
Query: 47 SRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEM 106
S+V +E+L +LEW +LC +S FA T GR + ++ + + S LL ET + +
Sbjct: 2 SKVEHEALELLEWPRLCDQLSGFASTEAGRRHC--RALALPLSLEHSRALLAETTEMLAL 59
Query: 107 QK--HGSCSL----DLTGVDLSLVKSAIREVRRAS-------------------PLRPNE 141
G S D+T V K LRP
Sbjct: 60 DGLLEGGLSFQGVADITAVVALCAKGGTAAGEALLALATTLAAARRLRRQIDDPALRPVC 119
Query: 142 ALAVVALLQFSETLQLSLRAAIKEDADLYIRF-MPLTQMLYQLMDMLIRNENNESL---- 196
+ A+VA L+ L+ L A++E + R PL + QL + R E E L
Sbjct: 120 S-ALVAELRTLPELEQRLHFALEEGGRVADRASAPLEAVRRQLKGL--RAERRERLQELL 176
Query: 197 -----FLE---VSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDEL 244
L+ ++ +GR L ++ GA GL+ SS GS + EP + + L + L
Sbjct: 177 RRHAPLLQDTVIAERNGRPVLAVKAGAAA-QLPGLVHDSSASGSTVFVEPQAVISLGNRL 235
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
+ + E+ VL L+ + + + ++++ +++LD ARA Y G P++
Sbjct: 236 RDLEGRERELEQAVLAELSALVGAEAEALQQLHAVLLRLDAALARARYGAWLGAVRPDL- 294
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
+ H P + L HPLLL Q +++
Sbjct: 295 ------EADPHAPFS-------------LVDLSHPLLLWQQRREQ--------------- 320
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
G+A VP+ I + + RV+ ITGPNTGGKT+
Sbjct: 321 ------GHAV------------------------VPVSITVGAELRVVAITGPNTGGKTV 350
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LK++GLA +MA++GL + S ++PW +V ADIGDEQSL Q+LSTFSGH+++I I+
Sbjct: 351 TLKSLGLAALMARAGLFLPCSGTPRLPWCGAVLADIGDEQSLQQNLSTFSGHIRRIARIL 410
Query: 485 SQ----STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 540
+ +LVLLDE+GAGT+P+EG+AL +LL A+ + LTIATTH GELK LKY
Sbjct: 411 AALAEPRQGATLVLLDEVGAGTDPVEGSALATALLRHLADR-ARLTIATTHFGELKALKY 469
Query: 541 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY-GAASA 599
++ FENA + FD L PTY++ WG+PGRS+A+ IA+RLGL V++ A+ L
Sbjct: 470 ADPRFENASVAFDVDTLSPTYRLQWGIPGRSNALAIAQRLGLSEAVLEQAQALLEPGGEG 529
Query: 600 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS 659
E+N+VI+ +E + + E EA L + LH+ LL S+ ++ Q+ +
Sbjct: 530 EVNQVIVGLESQRQRQQEAAEEAAALLARTELLHEELL-----------SRWHQQKQQSA 578
Query: 660 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 719
+ L + +QL S + + V + ++LR +S G+ Q T+
Sbjct: 579 E-------LQEQRRRQLERSIREGQQEVRRIIRRLRQGGDRS----AAGRGQLGETARQA 627
Query: 720 QTTVDKVEHPATASSSVVKDIKQSPRVKRTE----LPNVGDLVHVSSFGKKGTVIKVEPS 775
+ ++EH + P +R E +P VGD V V S GK V+ +
Sbjct: 628 GQRLKQLEH------------QHRPAPERREHGGWMPEVGDRVRVLSLGKAAEVLALADG 675
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
E+ V+ G M+ + I
Sbjct: 676 GRELTVRCGVMRLTVPLEGI 695
>gi|224079239|ref|XP_002305805.1| predicted protein [Populus trichocarpa]
gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 238/817 (29%), Positives = 396/817 (48%), Gaps = 150/817 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L++LEW LC+ ++ F TS+G+ T I ++ ++S +LLD+T AA+ + + G
Sbjct: 50 ETLKILEWSSLCNQLTPFTSTSMGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGP 109
Query: 112 CSLDLTGVD--LSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAA------I 163
LD +G++ ++ SA+ + L E AV + +LRAA +
Sbjct: 110 --LDFSGIEDITRILDSAVS----GTLLTVGELCAV----------RRTLRAARAVLERL 153
Query: 164 KEDADLYIRFMPLTQMLY---------------------QLMDM------LIRNE---NN 193
K+ D R+ PL ++L +++D +IR+E N
Sbjct: 154 KDSGDCSERYAPLLEILQNCSFQIELEKKVGFCIDCNLSKILDRASEDLEIIRSERKRNM 213
Query: 194 ESL--FLE----------------VSSIHGRLCI--RTGADQLSFKGLLL--SSSGIGSV 231
E+L L+ V+ RLC+ R L G++L SSSG+
Sbjct: 214 ENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCVGVRASHRYLIPDGVVLNVSSSGVTYF 273
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLAL-TEKMQVDLDEIEKMLNGIIQLDVVNARA 290
+EP AV LN+ L+ + KAEE +L+L T ++ +I+ ML+GII++D+ ARA
Sbjct: 274 MEPGEAVELNN-LEVMLSDSEKAEEIAILSLLTSEIAESARDIKYMLDGIIEVDLSFARA 332
Query: 291 TYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQ 350
Y+ G P I+ + S + +I + HPLL
Sbjct: 333 AYAYWMNGVRP-IWT--------SEGCGGISSSGGDYLLSIDIEGIRHPLL--------- 374
Query: 351 QAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTR 410
+ + R + G N+ E D + + S PVPI+I + TR
Sbjct: 375 -------NGTSRKRLSNILGSNSLNSMEVDEDSMLDTGKPSKNVSEFPVPINIKVECGTR 427
Query: 411 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSL 470
V+VI+GPNTGGKT +KT+G+A +M+K+GL++ + K+PWFD V ADIGD QSL Q+L
Sbjct: 428 VVVISGPNTGGKTASMKTLGVASLMSKAGLYLPAKNTPKLPWFDFVLADIGDHQSLEQNL 487
Query: 471 STFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATT 530
STFSGH+ +I I+ ++++SLVL+DEI +GT+P EG AL S+L + + L + TT
Sbjct: 488 STFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHYLRDHVN-LAVVTT 546
Query: 531 HHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNA 590
H+ +L LK + FENA MEF L+PTY+ILWG G S+A++IA+ +G +++ A
Sbjct: 547 HYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAKSIGFDSNIIERA 606
Query: 591 RQLYGAASAEINEVIIEMERFKTQFL-EHVHEARHFLML----SRNLHKNLLRTRRKILE 645
R+ + +++ E ++ ++ L + + E R+ L +LH ++
Sbjct: 607 RKW-------VEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIM-------- 651
Query: 646 HCASQRFRKVQKIS-DAAAIARSLVHKSAQ----QLCPSASQARSLVHKRAQQLRPSASQ 700
+ + ++Q S D ++L+ K Q +L + SQ ++V QLR ++
Sbjct: 652 ----ELYHEIQAESEDLDGRVKALMAKETQLVQLELKAANSQIETVVQNVETQLRKASPD 707
Query: 701 SLHCTKVGKNQHVLTSNFQ-QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 759
+ + + K++ + S + + D + T +SS P +G+ V
Sbjct: 708 QFN-SLIKKSESAIASIVEAHCSSDSLPASETDTSSYT--------------PQLGEQVL 752
Query: 760 VSSFGKK-GTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V G K TV++ E ++VQ G ++ MK +DI
Sbjct: 753 VKRLGNKLATVVEAPRDDETVLVQYGKIRVRMKKSDI 789
>gi|119483388|ref|ZP_01618802.1| MutS 2 protein [Lyngbya sp. PCC 8106]
gi|119458155|gb|EAW39277.1| MutS 2 protein [Lyngbya sp. PCC 8106]
Length = 879
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 234/854 (27%), Positives = 366/854 (42%), Gaps = 207/854 (24%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LCH +++FA T LG A +T+ I QT ++L LL +T A +++ +
Sbjct: 5 ETLELLEWQRLCHHLATFATTKLG--AVVTRNLPIPQTPSETLELLAQTKEAYQLELQLT 62
Query: 112 CSLDLTGV----------------------DLSLVKSAIREVRRASPLRPNEALAVVAL- 148
L L G+ +++ + R++RR E + L
Sbjct: 63 SGLSLQGIQDIGDALERVERHGILSGEELLNIATTLAGARQLRRQVDAHEEEVPVLAELV 122
Query: 149 --LQFSETLQLSLRAAIKEDADLYIRFMP-LTQM----------LYQLMDMLIRNENNES 195
L+ L+ + I + D+ R P LT + +YQ++ +++ +
Sbjct: 123 SELRTYPELEQEIHRCIDDRGDVTDRANPKLTDIRIKLKSTRDRIYQILQSILQRKAGAI 182
Query: 196 LFLEVSSIHGRLCIRTGADQ-LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
++ R I A Q G++ +S G IEP S + LN++L+Q +
Sbjct: 183 QEQLITQRGDRFVIPVKAPQKYQVPGIVHDTSAKGGTLYIEPKSTIELNNQLRQLQRREQ 242
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI--------- 303
EE V L+E++ ++E++L + +D+ +RA Y L P
Sbjct: 243 LEEEAVRQVLSEQIAEVQPDLERLLVIVTTIDLAVSRARYGLWLEANPPTFTNLKIQAEK 302
Query: 304 ---FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 360
LP D ++ PVT L + HPLL+ W+
Sbjct: 303 VECVLPSDTDQTRFQNPVT-------------LRQLRHPLLV----------WQ------ 333
Query: 361 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 420
++ E+ T + VPID+ I RV+ ITGPNTG
Sbjct: 334 --------------QQNEQGTPV---------------VPIDVTIKPSIRVVAITGPNTG 364
Query: 421 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF----------------------- 457
GKT+ LKT+G+A +MAK GL I + E ++PWFD V
Sbjct: 365 GKTVTLKTIGMAALMAKVGLFIPAREPVELPWFDLVLADIGDEQSIEQSLSTFSGHIRRI 424
Query: 458 ---------ADIGDEQSLS-----QSLSTFSGHLKQIGNII------------------- 484
A+IG LS Q L T ++ + N
Sbjct: 425 SRILNAIPSANIGTVNQLSIPVTHQQLGTDDSEVEPVQNQQEEVEIIEEVDSLETLKAKI 484
Query: 485 ---SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
S SL+LLDEIGAGT+P EG+AL +LL+ A S +++TIATTH GELK LKY
Sbjct: 485 KDPEDQISNSLILLDEIGAGTDPTEGSALATALLQYLANS-AVVTIATTHFGELKALKYQ 543
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
+D FEN+ +EFDE L+PTY++LWG+PGRS+A+ IA+RLGL +++ A G S ++
Sbjct: 544 DDRFENSSVEFDEKTLQPTYRLLWGIPGRSNALKIAQRLGLKSEILETAASYLGGTSQDV 603
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
N+VI +E + Q EA L + LH+ L+R + E Q ++ Q+
Sbjct: 604 NDVIAGLEAQRKQQETKAEEASKLLKETERLHQELIRKTALLKER--EQELKREQE---- 657
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
AI +L+ A + V +R QQ +P A + T+
Sbjct: 658 QAIKETLIQ---------AKGEIAQVIRRLQQGQPKAQDAQKATE--------------- 693
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
T+DK+ S +Q P K P VGD + + S G+ V+ +++V
Sbjct: 694 TLDKIAEQRLPSR------QQKPPEKPKFKPKVGDRIRIPSIGQTAEVMNEPDENGQLMV 747
Query: 782 QVGNMKWIMKFTDI 795
+ G MK + +I
Sbjct: 748 RFGIMKMSIGLAEI 761
>gi|22300014|ref|NP_683261.1| recombination and DNA strand exchange inhibitor protein
[Thermosynechococcus elongatus BP-1]
gi|22296199|dbj|BAC10023.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
Length = 811
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 217/390 (55%), Gaps = 73/390 (18%)
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
LS+SG IEP + L + LQQ + E + AL++++ D++ +L+ +
Sbjct: 238 LSASGATLYIEPQETIDLQNRLQQLAHQEAEVERAICQALSDQLATISDDLWYLLDVLTT 297
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LDV ARA YSL G P F+ Q ++L HPLL+
Sbjct: 298 LDVAVARARYSLWLQGNPPQ-FVSQTR---------------------LHLKALRHPLLV 335
Query: 343 -QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPI 401
Q+H ++ Q VPI
Sbjct: 336 WQEHHEQGQPV----------------------------------------------VPI 349
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + T+V+ ITGPNTGGKT LKT+GLA +MAK+GL++ ++ ++PWF ++ADIG
Sbjct: 350 DIELQPATKVVTITGPNTGGKTATLKTLGLAALMAKAGLYVPAAAPVELPWFTGIWADIG 409
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQ---STSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DEQSL+Q+LSTFS H+ I +I+++ + +LVLLDE+GAGT+P EGTAL ++LL
Sbjct: 410 DEQSLTQNLSTFSSHICNIRDILTELEVTGGNTLVLLDEVGAGTDPSEGTALAIALLRYL 469
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
AE S LT ATTH+GELK LKY + FENA +EFDE L PTY++LWG+PG+S+A+ IA+
Sbjct: 470 AEHAS-LTFATTHYGELKALKYQDSRFENASVEFDEETLAPTYRLLWGIPGQSNALAIAQ 528
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEM 608
RLGL +V+ A+ L S +NE+I+ +
Sbjct: 529 RLGLYPSIVEEAKALLSKDSNSVNEMIMGL 558
>gi|168030914|ref|XP_001767967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680809|gb|EDQ67242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 964
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 258/855 (30%), Positives = 399/855 (46%), Gaps = 135/855 (15%)
Query: 20 SFAITNKNRRGRLFCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREAT 79
S+ ++N++ F S +D DD + V E+L++LEW ++C VS FA T +
Sbjct: 50 SYEVSNES-----FLSDDVKADIDDGNN-VETETLKLLEWPRVCIQVSEFASTPMAVAVA 103
Query: 80 LTQLWSINQTYQDSLRLLDETNAA------------------IEMQKHGS-CSLDLTGVD 120
I +T +S L +T AA IE + G+ C L+ +
Sbjct: 104 RKGDLPIGRTVVESEELQAQTVAAQLLSSPLEFSGIEDLRKFIEDAQSGNVCQLE----E 159
Query: 121 LSLVKSAIREVRRA---------SPLRPNEALAVVAL--LQFSETLQLSLRAAIKEDADL 169
L LV+ + VRR S L + A ++ L + L L +AI+ D
Sbjct: 160 LCLVRKTLAAVRRLHNQVVGQSHSSLHVSGAASIGPLQAVMLGCNLCSELESAIEYCLDC 219
Query: 170 YIRFMPLTQMLYQLMDM-LIRNENN---ESLFLEVSSI---------------HGRLCIR 210
R L + +L + L+R EN+ ESL E +++ GR+C+
Sbjct: 220 S-RSTILDRASSKLASVRLMRQENSMALESLIKETAAMVFSAGGMDSQLVTKRRGRMCVA 278
Query: 211 TGADQLSFKGLL-------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALT 263
A Q KGLL +S++G +EP SA+ N+E Q A K EE +L
Sbjct: 279 VRASQ---KGLLKGGVTLDVSNTGATYFMEPESAIHFNNEEIQL-AEEEKLEEIAVLRQL 334
Query: 264 EKMQVDL-DEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
M +D D++ +L + LD+ ARA +S G P +F+ + ++
Sbjct: 335 TFMLLDTSDDVIDLLERVTTLDLACARAGHSAWLNGARP-VFVNSMADSMSSSHSSSALD 393
Query: 323 SSSERE--WTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
++ +E + + HPLLL LES R G R+ EK
Sbjct: 394 TTPAKEDLLLVDIKGVRHPLLL----------GSALESPVNSPRY-----GIYIRQKEKS 438
Query: 381 TNLSPS---EMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ S ++ PVPIDI I +V+ ITGPNTGGKT LKT+G+ +MAK
Sbjct: 439 RRSSSGLKGAVESSNVDRMLPVPIDINIRTGVKVVTITGPNTGGKTAALKTLGVVALMAK 498
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
+GL + ++ ++PWFDS+ ADIGD+QSL ++LSTFSGH++++ I+ T+QSL+LLDE
Sbjct: 499 AGLCLPATGVPRLPWFDSILADIGDDQSLERNLSTFSGHIRRVRQILEAGTAQSLILLDE 558
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
IG GT+P EG AL ++L A S LT+ATTH EL+TLK + FENA +EFD L
Sbjct: 559 IGGGTDPSEGAALATAILRNLAASVQ-LTLATTHCAELRTLKDHDPEFENASVEFDVKTL 617
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY-----GAASAEINEVIIEMERFK 612
+PTY++LWG+ G+S+A+NIA LG V+ AR+L + A E+++ + + +
Sbjct: 618 RPTYRVLWGIAGQSNALNIAASLGFDSEVLTRARELVTKLVPASLGARSTELMVPLVKQR 677
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKS 672
+ LE A L + L+ L + + A + R++Q+ A + + H +
Sbjct: 678 NEQLERSAAAASALAIISKLYNKLQSEAENLAQKEA--KLRRLQE----EATNKKVAHAN 731
Query: 673 AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATA 732
A + + + + SA Q K +++ + Q + VE AT
Sbjct: 732 AS------------LEEILLKFQESAHQ-----KAKEDEGFSMRDAQAAIIAVVEEHATK 774
Query: 733 SSSVVKDIKQSP--------RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE--IVVQ 782
V I +P + E VGD V + GK I P E + VQ
Sbjct: 775 P---VASITSNPASITEPEGKEGEGEQLRVGDEVIIKRLGKLPATIVDIPQAENDYLTVQ 831
Query: 783 VGNMKWIMKFTDIVT 797
VG MK +K +I++
Sbjct: 832 VGTMKMRVKLNEILS 846
>gi|314936676|ref|ZP_07844023.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
gi|313655295|gb|EFS19040.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
Length = 783
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 232/792 (29%), Positives = 366/792 (46%), Gaps = 161/792 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREAT---------------LTQLWSINQTYQD---- 92
++L VLE+DK+ V+S + LGRE + + I+Q Y
Sbjct: 4 KTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLP 63
Query: 93 SLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEAL----AVVAL 148
SL L + + I K G L +L+++K I +V+ N+ L VV
Sbjct: 64 SLSGLSKVSPLIHRAKIGGV---LNVTELNVIKRLI-QVQNQFKTFYNQLLEEDEGVVKY 119
Query: 149 LQFSETL-QL----SLRAAIKEDADLY------------IR--FMPLTQMLYQLMDMLIR 189
+E + QL L I E D Y IR TQ + Q +D +++
Sbjct: 120 PILNERMNQLPVLTDLYQEINEKCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVK 179
Query: 190 NENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDEL 244
++ N+ + ++ + R I A+ + FKG++ S+SG IEP S V +N+++
Sbjct: 180 SQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQI 239
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
+ R E +L LT + D + + + Q+D + A+A Y+ S GT P +
Sbjct: 240 SRLRNDEAVERERILTELTGLVAADDNNCLVAESVMGQIDFLTAKARYARSIKGTKPTFY 299
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
+E T+YLP AYHPLL KD ANT
Sbjct: 300 ----------------------KERTVYLPNAYHPLL-----------NKDTVVANT--- 323
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
I ++ITGPNTGGKT+
Sbjct: 324 --------------------------------------IEFIDDIETVIITGPNTGGKTV 345
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I I+
Sbjct: 346 TLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEIL 405
Query: 485 SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
++ SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH+ ELK Y+ +
Sbjct: 406 KETDKNSLVLFDELGAGTDPSEGAALAMSILDHVRDIGSLV-MATTHYPELKAYSYNREG 464
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV 604
NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+ + G EIN +
Sbjct: 465 VMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQEINSM 524
Query: 605 IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKV-QKISDAAA 663
I +E+ + E E L +R H +L R Q+++ QK+ D A
Sbjct: 525 IESLEKNSKRVDEQRIELEKLLREARTTHDDLER---------QYQQYKNYEQKLMDEAK 575
Query: 664 IARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTV 723
A Q SA++ + K +++R + +H L +
Sbjct: 576 -------DKANQRIKSATKEADDILKDLREMRDKKGADV-------KEHEL--------I 613
Query: 724 DKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQV 783
DK +H + K +KQ+ + ++ + + GD V V S+G+KG V+++ + E +VQ+
Sbjct: 614 DKKKHLEDQYEA--KSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVLEL-SGEHEAIVQM 670
Query: 784 GNMKWIMKFTDI 795
G +K + D+
Sbjct: 671 GIIKMKLPIEDL 682
>gi|145347182|ref|XP_001418054.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578282|gb|ABO96347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 725
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 162/224 (72%), Gaps = 6/224 (2%)
Query: 391 SALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
A +L P+P+DIF +++T+V+VITGPNTGGKT +K VGLA +MAKSG+ I +E A +
Sbjct: 487 GAPKLKGPIPVDIFASKRTKVVVITGPNTGGKTAAMKAVGLAALMAKSGIFI-PAERAVI 545
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
P+FD V DIGD+QSL SLSTFSG L + I+ QST +SLVL+DE+G GT+P EG A+
Sbjct: 546 PFFDKVLVDIGDDQSLLTSLSTFSGRLTRAQAILEQSTPESLVLMDEVGTGTSPAEGAAI 605
Query: 511 GMSLLEAFA-----ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILW 565
G +LL+A A + G+ LT ATTHHG+LK LKY ++ FENA +EFDE L+PTYK+LW
Sbjct: 606 GYALLKALAGIIPGQLGACLTFATTHHGQLKALKYEHEEFENAAVEFDEADLRPTYKLLW 665
Query: 566 GVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
GVPGRSSA+ IA R L VV AR+L G +++ I ++E
Sbjct: 666 GVPGRSSALQIATRYKLDADVVHEARELLGEGLVSLDDTISKLE 709
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 41 DSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET 100
D+D + ++ +SL WD ++ A T+LG+ A T + T +++ + LDET
Sbjct: 66 DADAVRRDLLEKSLASAGWDDARMFLAKRASTALGKAACET--LEASTTSREARKALDET 123
Query: 101 NAAIEMQ-KHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSL 159
AA+ M+ KHG SL+ G+ + V+ + R+ SPL +E A A L+ ++ L+ S+
Sbjct: 124 EAAMAMESKHG-VSLEFGGMLTAEVRRGFYKTRQGSPLGGDELAATAAFLESAKRLKTSI 182
Query: 160 RAAIKEDADLYIRFMPLTQMLYQL-----MDMLIRN--------ENNESLFL-----EVS 201
+ E +PL + ++ + IR +N S L +
Sbjct: 183 E-GVTESGRRPRALVPLRAISGEMITHSELAEKIRGAVEETGEFRDNASPELRRARAQKG 241
Query: 202 SIHGRL--CIRTGADQLSFKG--------------LLLSSSGIGSVI--EPLSAVPLNDE 243
+ G+L ++ + +G L++ + G+++ EP V LN E
Sbjct: 242 AAEGKLKKAMQGKGTPTTHQGRMVLAIPAPAPPDVLVVGTMAGGALVLIEPPGIVTLNRE 301
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP-- 301
L QA + A + + L+ + + ++E+ L +I+LDV+ A+ YS + G P
Sbjct: 302 LAQAVDAEKSAIDAIKRELSNDIALVVEELFACLEIVIKLDVIAAKCRYSQALNGVRPEF 361
Query: 302 NIFLPQD 308
++F D
Sbjct: 362 SVFADDD 368
>gi|414160430|ref|ZP_11416698.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878328|gb|EKS26213.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
Length = 782
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 225/796 (28%), Positives = 371/796 (46%), Gaps = 170/796 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEM-QKHG 110
++L VL++DK+ V A + LGRE + S YQ + +DET+ ++ KH
Sbjct: 4 KTLDVLDFDKIKALVEKEAVSDLGREKAAS--MSPASDYQTVVHQIDETDEISQIYNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQ--------FSETLQ------ 156
SL +G LS V I + S L E + L+Q +S+ L+
Sbjct: 62 LPSL--SG--LSKVSPLIHRAKIGSMLNVRELNQIKRLIQVQNQYKTFYSQLLEEEEAIN 117
Query: 157 -------------LS-LRAAIKEDADLY--------------IRFMPLTQMLYQLMDMLI 188
LS L IK+ D Y R +Q + Q +D ++
Sbjct: 118 YPILDERMTQLPILSDLYQEIKQKCDAYDLFDDASYELQSIRSRIHSTSQRIKQNLDRVV 177
Query: 189 RNENNESLF--LEVSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDE 243
++++N+ L ++ + R I A+ + F G++ SSSG IEP + V +N++
Sbjct: 178 KSQSNQKKLSDLIITVRNDRHVIPVKAEYRQDFNGIVHDQSSSGQTLYIEPSAVVEMNNK 237
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ + R E +L LT ++ + D + + Q+D + A+A Y S GT P
Sbjct: 238 ISRLRNDEKAEVERILTELTLEVAGEADACLIAESVMGQIDFLTAKARYGSSIKGTKPEF 297
Query: 304 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 363
+ ER+ +YLPKA+HPLL
Sbjct: 298 --------------------TEERK--VYLPKAFHPLL---------------------- 313
Query: 364 RRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKT 423
P + + +E + + ++ITGPNTGGKT
Sbjct: 314 --------------------DPKTVVANTIEFVDGI----------QTVIITGPNTGGKT 343
Query: 424 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 483
+ LKT+GL ++MA+SGL I + + +K+ FD+V+ DIGDEQS+ QSLSTFS H+K I I
Sbjct: 344 VTLKTLGLIIVMAQSGLLIPTLDGSKLGVFDNVYCDIGDEQSIEQSLSTFSSHMKNIVEI 403
Query: 484 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
+ + S++L DE+GAGT+P EG AL MS+L+ + G+L+ +ATTH+ ELK Y+ +
Sbjct: 404 LKHADHNSVILFDELGAGTDPSEGAALAMSILDNVQKRGALV-MATTHYPELKAYSYNRE 462
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 603
NA +EFD L PTYK+L GVPGRS+A I+ +LGL G ++++A+ + G EIN
Sbjct: 463 GVMNASVEFDVNTLSPTYKLLMGVPGRSNAFEISSKLGLNGKIIRDAKAMIGQDEQEINN 522
Query: 604 VIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ----KIS 659
+I +E+ + E L +++LH+ L SQ++ + Q ++
Sbjct: 523 MIASLEKNTKRVDNQRIELEQLLREAQDLHRQL------------SQKYDQYQNYEKQLM 570
Query: 660 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 719
D A K+ Q++ + +A ++ +QLR + + ++ + + L ++
Sbjct: 571 DEAKT------KANQRVKVATKEAEEIISD-LRQLRDEKNADVKEHELIEKRKHLDEQYE 623
Query: 720 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 779
T D+KQ+ + K+ + GD V V ++G+KG V+++ EE
Sbjct: 624 AT-----------------DLKQNVKKKKWDEIKAGDEVKVLTYGQKGEVLEI-LDDEEA 665
Query: 780 VVQVGNMKWIMKFTDI 795
VVQ+G +K + D+
Sbjct: 666 VVQMGIIKMKLPIADL 681
>gi|87301320|ref|ZP_01084161.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
gi|87284288|gb|EAQ76241.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
Length = 800
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 240/811 (29%), Positives = 354/811 (43%), Gaps = 190/811 (23%)
Query: 49 VVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK 108
+ E+L +LEW++L ++SFA TS G A + + +SLRLL ET+ + +
Sbjct: 4 IAAEALELLEWERLGQHLASFASTSAG--AAHCRALPLAADRSESLRLLAETSELLGLDG 61
Query: 109 --HGSCSL----DLTGV-------------DLSLVKS---AIREVRR---ASPLRPNEAL 143
G S DLTG DL V S R +RR A LRP +
Sbjct: 62 LIEGGLSFQGAADLTGTLRHCAKGGTAGGEDLLAVASTQAVARRLRRQIEAPELRPVCSQ 121
Query: 144 AVVALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNEN 192
+ L E L+ LR ++E + R P L Q+ + L+R +
Sbjct: 122 LMGDLRTLPE-LEQRLRFCLEEGGRVADRASPELAGLRQQLAGLRQLRRDRLQELMRRQG 180
Query: 193 NESLFLEVSSI---HGR--LCIR-TGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDEL 244
L+ S I +GR L ++ T A QL GL+ SS GS IEP + + L +++
Sbjct: 181 G---LLQDSVIAERNGRPVLAVKVTAASQLP--GLVHDSSASGSTVFIEPKAVITLGNQI 235
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
++ + E VL +L+ + + +E++ ++ LDV ARA Y G P +
Sbjct: 236 RELEGRERQEEWRVLASLSALVAEEAPALEELHRVLVALDVALARARYGQWLGAVRPEL- 294
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
S++ + + L HPLLL Q +
Sbjct: 295 -------------------SADPQAPVLLRDLRHPLLLWQER------------------ 317
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
R GE A VP+ + + + RV+ ITGPNTGGKT+
Sbjct: 318 ----------RGGE-----------------AKVVPVTVSVGAELRVVAITGPNTGGKTV 350
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LK+VGLA +MA++GL + S ++PW V ADIGDEQSL Q+LSTFSGH+++I I+
Sbjct: 351 TLKSVGLAALMARAGLFLPCSGTPQLPWCSLVLADIGDEQSLQQNLSTFSGHVRRIARIL 410
Query: 485 SQ-----STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 539
+ +LVLLDE+GAGT+P EGTAL ++LL AE + LTIATTH GELK LK
Sbjct: 411 EALDAPAAPGATLVLLDEVGAGTDPTEGTALAIALLRHLAER-ARLTIATTHFGELKALK 469
Query: 540 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA-AS 598
Y++ FENA + FD L PTY + WG+PGRS+A+ IA RLGL V+ A L
Sbjct: 470 YADSRFENASVAFDSDTLSPTYHLQWGIPGRSNALAIASRLGLDQAVIAEANGLLAPRGE 529
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK--------------NLLRTRRKIL 644
E+N+VI +E + + E EA L + LH+ L RR+ L
Sbjct: 530 GELNQVIRGLEDQRRRQQEAAEEAAALLARTELLHEELLQRWQQQQEQSAELQEQRRQAL 589
Query: 645 EHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHC 704
EH I D R ++ + LR
Sbjct: 590 EH----------SIRDGQQEVRRIIRR----------------------LRQGGGDGERA 617
Query: 705 TKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFG 764
+ G +Q V+ P ++S + P VG+ + + S G
Sbjct: 618 RQAG-------VRLKQLQVEHTPQPQRRATSGWR-------------PEVGERIRLLSLG 657
Query: 765 KKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K V+++ E+ V+ G ++ + + I
Sbjct: 658 KAAQVLEISADGRELSVRCGVLRLQVDLSGI 688
>gi|452823864|gb|EME30871.1| DNA mismatch repair protein MutS2 [Galdieria sulphuraria]
Length = 902
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 226/741 (30%), Positives = 341/741 (46%), Gaps = 135/741 (18%)
Query: 46 KSRVVYESLRVLEWDKLCHSVSSFARTSLGR----EATLTQLWSINQTYQDSLRLLDETN 101
+ ++ +E+L+ L+W +C V+ F +T R WS QT Q L ETN
Sbjct: 99 REQLEHETLKALDWFPICEKVADFCQTDRVRLFVANGMKVNHWSKEQTQQ----YLMETN 154
Query: 102 AAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVV----ALLQFSETLQ- 156
I + G D V +L+++ + ++ S L P E +V A+ + ++LQ
Sbjct: 155 ECIRFMESGYSPTDWM-VGANLLENIVDRAQKGSLLTPRELYQIVSTTLAISNWKQSLQS 213
Query: 157 ----------------------------LSLRAAIKEDAD--LY-----IR--FMPLTQM 179
+ + I+++A LY IR F+ + ++
Sbjct: 214 QSTNYPLLYRIVENVVSMKDLEDSICRSVDEKEQIRDNASIRLYETRTQIRSTFVHIRKV 273
Query: 180 LYQLMDMLIRNENNESLFLEV-SSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPL 235
L+ L+ ++ ESL + + GR I A + + G++ +SSSG IEP
Sbjct: 274 LHSLL-----QQHEESLQEPIYTERFGRYVIPVKATRRNRVPGIIQDISSSGSTLYIEPN 328
Query: 236 SAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLS 295
S L + +QQ R +A E++L L+ K+ + D + + + I QLD + ARA +S
Sbjct: 329 SIRSLTNRMQQLRHIEEEAIEEILFDLSRKVCENADHLLYISHAIFQLDWILARAQFSQQ 388
Query: 296 FGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKD 355
G P I S ++ ++ KV + W L HPL
Sbjct: 389 INGRFPTIV------ESFSNAALSCKVDA----WK--LRGVRHPL--------------- 421
Query: 356 LESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVIT 415
LE VPID + + IT
Sbjct: 422 -------------------------------------LERNSIVPIDFEVRPGVTAVCIT 444
Query: 416 GPNTGGKTICLKTVGLAVMMAKSGLHILSSEY-AKVPWFDSVFADIGDEQSLSQSLSTFS 474
GPNTGGKT+ LKT G+ ++M K GL + + +P+F+ +FAD+GD QS++QSLSTFS
Sbjct: 445 GPNTGGKTVALKTFGIVILMTKVGLFVPCEQNDVHIPFFEDIFADVGDHQSVTQSLSTFS 504
Query: 475 GHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 534
H+ +I I+ S +SLVLLDEIG GT+P+EG AL MSLL E L +ATTHHGE
Sbjct: 505 SHILRIQRIVQLSHKRSLVLLDEIGTGTDPVEGCALAMSLLLYLVERVGFL-MATTHHGE 563
Query: 535 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 594
LKTLKY + FENA +E D L+PTY+++WGV GRSSAI IA+RLGL + Q+AR +
Sbjct: 564 LKTLKYKDARFENASVELDTFSLRPTYRLIWGVAGRSSAIAIAQRLGLDNWITQSARSIV 623
Query: 595 GAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRK 654
+++ I ++ER K Q +E + L + L+ +I + K
Sbjct: 624 ENGVDKLSLAIEDIERTKQQVIEMKEQIERKERELECLERQLMEREERIQQLENEWIETK 683
Query: 655 VQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL------RPSASQ--SLHCTK 706
Q + A AR + K +++ S A SL+ +R Q+L + SAS S+ TK
Sbjct: 684 KQALEQDFANAREQIAKVIKEVQRCGSDA-SLIMERKQELESLMLEQKSASHHDSVSGTK 742
Query: 707 VGKNQHVLTSNFQQTTVDKVE 727
V K VL + VE
Sbjct: 743 VRKGDWVLVKRLSSEPLQVVE 763
>gi|418620520|ref|ZP_13183324.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
gi|374822650|gb|EHR86670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
Length = 783
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 306/625 (48%), Gaps = 115/625 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++++ N+ + ++ + R I A+ + FKG++ S+SG
Sbjct: 167 TQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + + + + Q+D + A+A
Sbjct: 227 IEPSSIVEMNNQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P + +E T+YLP AYHPLL
Sbjct: 287 YARSIKGTKPTFY----------------------KERTVYLPNAYHPLL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT I
Sbjct: 315 -NKDTVVANT-----------------------------------------IEFIDDIET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 393 TFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSILDHVRDIGSLV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E L +R H +L R Q+
Sbjct: 512 TMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDDLER---------QYQQ 562
Query: 652 FRKV-QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN 710
++ QK+ D A A Q SA++ + K +++R +
Sbjct: 563 YKNYEQKLMDEAK-------DKANQRIKSATKEADDILKDLREMRDKKGADV-------K 608
Query: 711 QHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI 770
+H L +DK +H + K +KQ+ + ++ + + GD V V S+G+KG V+
Sbjct: 609 EHEL--------IDKKKHLEDQYEA--KSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVL 658
Query: 771 KVEPSKEEIVVQVGNMKWIMKFTDI 795
++ + E VVQ+G +K + D+
Sbjct: 659 EL-SGENEAVVQMGIIKMKLPIEDL 682
>gi|228476275|ref|ZP_04060977.1| MutS2 protein [Staphylococcus hominis SK119]
gi|228269678|gb|EEK11180.1| MutS2 protein [Staphylococcus hominis SK119]
Length = 783
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 306/625 (48%), Gaps = 115/625 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++++ N+ + ++ + R I A+ + FKG++ S+SG
Sbjct: 167 TQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + + + + Q+D + A+A
Sbjct: 227 IEPSSIVEMNNQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P + +E T+YLP AYHP+L
Sbjct: 287 YARSIKGTKPTFY----------------------KERTVYLPNAYHPIL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT I
Sbjct: 315 -NKDTVVANT-----------------------------------------IEFIDDIET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 393 TFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSILDHVRDIGSLV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E L +R H +L R Q+
Sbjct: 512 TMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDDLER---------QYQQ 562
Query: 652 FRKV-QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN 710
++ QK+ D A A Q SA++ + K +++R +
Sbjct: 563 YKNYEQKLMDEAK-------DKANQRIKSATKEADDILKDLREMRDKKGADV-------K 608
Query: 711 QHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI 770
+H L +DK +H + K +KQ+ + ++ + + GD V V S+G+KG V+
Sbjct: 609 EHEL--------IDKKKHLEDQYEA--KSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVL 658
Query: 771 KVEPSKEEIVVQVGNMKWIMKFTDI 795
++ + E VVQ+G +K + D+
Sbjct: 659 EL-SGENEAVVQMGIIKMKLPIEDL 682
>gi|33239697|ref|NP_874639.1| mismatch repair ATPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237222|gb|AAP99291.1| Mismatch repair ATPase (MutS family) [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 805
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 229/788 (29%), Positives = 364/788 (46%), Gaps = 158/788 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN--AAIEMQKH 109
E+L +LEW +LC ++SFA TS G++ T SI + + R L ET +I+ +
Sbjct: 19 ETLDLLEWPRLCEQLASFASTSQGQKKCKT--CSIPDDIKTTRRYLSETIEIGSIDEEIE 76
Query: 110 GSCS------LD-----------LTGVDLSLVKSAIREVRR-----ASPL-RPNEALAVV 146
G S LD L+G++L V ++ RR PL RP + +
Sbjct: 77 GGISFLGVNYLDQILLRSSKGGVLSGLELLSVAETLKAARRLRRQIYDPLSRPIISSLLS 136
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIR----FMPLTQMLY-------QLMDMLIRNENNES 195
L E LQ + ++E + R L + +Y L+ LIR N+
Sbjct: 137 DLATLPE-LQRLIEFGLEEGGRVADRASEKLSELRRQVYILRIERRDLLKDLIRKCNS-- 193
Query: 196 LFLEVSSIHGR-----LCIRTGA-DQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARA 249
FL+ + I R L +++GA DQL S+SG +EP + +PL + +++ A
Sbjct: 194 -FLQDTVIAERYNRPVLALKSGAIDQLLGTIHDNSASGNTVFLEPKAVIPLGNRIEEFEA 252
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
+ E+ +L +E++ + +E + +++L+ ARA YS GG +P I
Sbjct: 253 KILVEEQRLLAYWSEEVGTNFQVLESLSQILLRLEFALARARYSNWLGGVAPQI------ 306
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKL 368
E + + + HPLL+ Q+H ++
Sbjct: 307 --------------RDEEDAPFIIQEFRHPLLIWQEHYEQ-------------------- 332
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
G+ +PI ++ RV+ ITGPNTGGKT+ LK+
Sbjct: 333 --GDVV------------------------IPISFEVSSDLRVVAITGPNTGGKTVTLKS 366
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI---IS 485
+GLA++M K GL + +PW + V ADIGDEQSL Q+LSTFSGH+ +I I I+
Sbjct: 367 IGLAILMTKLGLFLPCVGEPSLPWCNQVLADIGDEQSLQQNLSTFSGHVVRIIRILDAIA 426
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
+ S++LLDE+GAGT+P EGTAL ++LL+ FA+ LTIATTH GELK LKY + F
Sbjct: 427 IRSGPSIILLDELGAGTDPTEGTALAIALLKTFADRAR-LTIATTHFGELKALKYHDSRF 485
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE-INEV 604
ENA + FD ++PTY + WG+PG+S+A+ IA RLGL +V A+ L G+ + +N+V
Sbjct: 486 ENASVGFDSETIRPTYHLQWGIPGKSNALAIARRLGLDHLVANRAQDLIGSNGVDNVNQV 545
Query: 605 IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI 664
I +E + + + EA L + LH L+ S+ ++ Q+ D
Sbjct: 546 IQGLEEQRQRQQDAAEEAAALLARTEMLHDELM-----------SRWHKQCQQSED---- 590
Query: 665 ARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVD 724
+ ++L S + + V + ++LR ++ K G+ + + +Q
Sbjct: 591 ---FQERGRKELEISIREGQVEVRELIRRLRDRSADGEIARKTGQRLRRIENIHRQ---- 643
Query: 725 KVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVG 784
++S + +R P GD V + S GK G VI V ++ V G
Sbjct: 644 ----------------QKSFKNERAWSPKAGDRVRLISIGKAGEVISVSADGRQLTVMCG 687
Query: 785 NMKWIMKF 792
+ I+
Sbjct: 688 LFRSIVDL 695
>gi|302391195|ref|YP_003827015.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
gi|302203272|gb|ADL11950.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
Length = 801
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/389 (38%), Positives = 221/389 (56%), Gaps = 28/389 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + K LVITGPNTGGKT+ LKTVGL +MA+SGLHI + +K+ FD +
Sbjct: 319 VPIDIKLGGKFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAVFDEIHG 378
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ +I +I+ + +LVLLDEIGAGT+P EG AL M++LE
Sbjct: 379 DIGDEQSIEQNLSTFSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAMAILEEL 438
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + TIATTH+ +LKT Y + +NA +EFD L+PTY++ G+PGRS+A IA
Sbjct: 439 YSRGRINTIATTHYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRSNAFEIAG 498
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP V++ AR E++ +I +E K +E+ AR ++ L K
Sbjct: 499 RLGLPTEVIEKARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKEL-KEEYE 557
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
T+ + +E Q+ +K DA A A ++ +S +++ ++ + Q++ +
Sbjct: 558 TKLEEVEKL-EQKIKK-----DAYAEAEKIIAESKKKVNEVVTEMKEKAEVNQQEVDRAK 611
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
S K+ + ++ L+S VD + D+KQ + +E VGD V
Sbjct: 612 S------KIDEYKYNLSSE----RVD-----------LESDLKQQRIQQNSEDLEVGDKV 650
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
+ K+G +I++ KEE V+Q G MK
Sbjct: 651 RLKKLNKEGEIIELSEDKEEAVIQAGPMK 679
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 28/115 (24%)
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTE---KMQVDLDEIEKMLNGIIQLDVVNA 288
IEP++ V LN++L R+ + + EE+V LTE +++ +LD I++ L + LD A
Sbjct: 226 IEPMAVVKLNNKL---RSFMAEEEEEVYRILTELTYEVREELDRIKETLKLLAWLDFTFA 282
Query: 289 RATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
+A YS G EPV + +E I L KA HPL+ Q
Sbjct: 283 KAEYSFKIEGA----------------EPVLN------QEEYINLEKARHPLIPQ 315
>gi|116073767|ref|ZP_01471029.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
gi|116069072|gb|EAU74824.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
Length = 804
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 292/599 (48%), Gaps = 110/599 (18%)
Query: 59 WDKLCHSVSSFARTSLGREAT----------LTQLW---SINQTYQD-------SLRLLD 98
W +LC ++SFA T GR A ++ W SI D S + +
Sbjct: 25 WPRLCAHLASFASTQPGRRAAKATALPDDLEASRQWLARSIELAGLDGVTEGGLSFQGVH 84
Query: 99 ETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR--ASP-LRP--NEAL-AVVALLQFS 152
+ +A ++ G + ++++ +A R +RR P LRP E AV +
Sbjct: 85 DLDAVLKRCSKGGVADGEELLEVADTLAAARRLRRQIVDPDLRPLCTELFNAVATFPELE 144
Query: 153 ETLQLSL----RAAIKEDA---DLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHG 205
+ L+ SL R A + A L +++ L Q + ++R + + ++ HG
Sbjct: 145 QRLKFSLEEGGRVADRASAALAGLRLQWQSLRQQRRDRLQDVMRRWSAQLQDTVIAERHG 204
Query: 206 R--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLA 261
R L ++ GA KG++ SS G+ + EP + + L + L + + E+ VL
Sbjct: 205 RPVLAVKAGAVG-HCKGMVHDSSASGNTVFVEPQAVIELGNRLAAQEGRIREEEQRVLAE 263
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L+ + D + K+ ++ LD+ ARA Y GG P + D
Sbjct: 264 LSTAVGEQHDPLTKLGEVLLLLDLTLARARYGQWLGGVPPRLEADPDAP----------- 312
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
L + HPLL+ Q K++ YG +
Sbjct: 313 ---------FALEQLRHPLLVWQQKRE--------------------YGADV-------- 335
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
VPI I +A RV+ ITGPNTGGKT+ LK++GLA +MA++GL
Sbjct: 336 -----------------VPISITVAGDLRVVAITGPNTGGKTVTLKSIGLAALMARAGLW 378
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS---QSTSQSLVLLDEI 498
+ +PW V ADIGDEQSL QSLSTFSGH+K+IG I++ Q + +LVLLDE+
Sbjct: 379 LPCQGTPSLPWCALVLADIGDEQSLQQSLSTFSGHVKRIGRILAALDQGATPALVLLDEV 438
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EGTAL +LL + A+ + LTIATTH GELK LKYS+ FENA + FD L
Sbjct: 439 GAGTDPSEGTALATALLRSLADR-ARLTIATTHFGELKALKYSDSRFENASVAFDSETLS 497
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA-ASAEINEVI--IEMERFKTQ 614
PTY++LWG+PGRS+A+ IA RLGL V++ AR L A ++N VI +E +R + Q
Sbjct: 498 PTYQLLWGIPGRSNALAIATRLGLDPQVIEQARGLLSPQADGDVNAVIRGLEEQRQRQQ 556
>gi|33863813|ref|NP_895373.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9313]
gi|33635396|emb|CAE21721.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9313]
Length = 828
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 228/823 (27%), Positives = 369/823 (44%), Gaps = 150/823 (18%)
Query: 16 FNTKSFAITNKNRRGRLFCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLG 75
+ + +++ R + S V +S S ++L+ LEW +LC ++ FA T G
Sbjct: 6 YGRDDWLLSSSVGRNSVEMSAVVMSSEVSTASLAFQDTLKQLEWPRLCEHLAGFASTLQG 65
Query: 76 REATLTQLWSINQTYQDSLRLLDET--NAAIEMQKHGSCSL----DL------------- 116
R Q S+ S L ET A++ G S DL
Sbjct: 66 RRHC--QTLSLPADLSASRLRLAETLEIGALDGLIDGGLSFQGVHDLGHILARCSKGGVA 123
Query: 117 TGVDLSLVK---SAIREVRRA---SPLRPNEALAVVALLQFSETLQLSLRAAIKED---- 166
+G +L V +A R +RR LRP + ++ + E L+ L+ A++E
Sbjct: 124 SGEELLAVADTLAAARRLRRQINDPELRPTISSLLLDVATMPE-LERRLKFALEEGGRVA 182
Query: 167 -------ADLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLS-F 218
A L ++ L Q + ++R ++ HGR + A +S
Sbjct: 183 DRVSSKLAGLRRQWQGLRQERRDCLQEVVRRHAAMLQDTVIADRHGRPVLAVKAAAVSQL 242
Query: 219 KGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKM 276
GL+ SS GS + EP + L++ L + + + ++ VL L+ + I ++
Sbjct: 243 PGLVHDSSASGSTVFVEPQVVITLSNRLAELDGRIREQQQLVLAELSAAVAEAGVSIGRL 302
Query: 277 LNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKA 336
++QLD+ AR Y GG P + H + S L +
Sbjct: 303 AEVLLQLDLALARGRYGQWLGGVPPTL-----------HAEAAAPFS---------LQEL 342
Query: 337 YHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELA 396
HPLL+ QH++ +A
Sbjct: 343 RHPLLVWQHRRDHGEA-------------------------------------------- 358
Query: 397 HPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSV 456
VPI + ++ +V+ ITGPNTGGKT+ LK+VGLA++MA++GL + + +PW V
Sbjct: 359 -VVPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPWCAQV 417
Query: 457 FADIGDEQSLSQSLSTFSGHLKQIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
ADIGDEQSL Q+LSTFSGH+K+IG I +++ +LVLLDE+GAGT+P EGTAL +
Sbjct: 418 LADIGDEQSLQQNLSTFSGHVKRIGCILEALNEGPGPALVLLDEVGAGTDPSEGTALATA 477
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
LL A+ + LTIATTH G+LK LKY + FENA + FD + PTY++ WG+PGRS+A
Sbjct: 478 LLRTLADR-ARLTIATTHFGKLKALKYGDSRFENASVAFDGETMLPTYRLQWGIPGRSNA 536
Query: 574 INIAERLGLPGIVVQNARQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
++IA RLGL G V+ +A++L G E+NEVI +E ++ +A L + L
Sbjct: 537 LSIAMRLGLDGAVIAHAQELLGPCGDGEVNEVIRGLEEQRSLQQAAAEDAAALLARTELL 596
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
H+ LL R++K +K S A L + Q+L S + + V + +
Sbjct: 597 HEELL------------SRWQKQRKQSAA------LQEQGRQKLESSIREGQKEVRQLIR 638
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+LR + + G+ + ++ + I+ + P
Sbjct: 639 RLREGRADGESARRAGQRLRRIQADHR--------------------IQPQRKQHMGWRP 678
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VG+ + + + GK VI + +++ V+ G M+ ++ + +
Sbjct: 679 EVGERIRLLALGKAAEVIAISEDGKQLTVRCGVMRSTVELSGV 721
>gi|259047143|ref|ZP_05737544.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
gi|259036193|gb|EEW37448.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 200/663 (30%), Positives = 317/663 (47%), Gaps = 141/663 (21%)
Query: 159 LRAAIKEDA-----------DLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSI-HGR 206
L A+I+ED + + Q + + MD + +N + L + +I + R
Sbjct: 136 LEASIREDGYVLDSASPNLHGIRVGIQKTEQEIRRQMDQYLTGKNAQYLSDTIITIRNDR 195
Query: 207 LCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALT 263
+ A+ S F G + SG G + EP + V LN++L++ + + E +L L+
Sbjct: 196 YVLPVKAEYKSVFGGTVHDQSGTGQTLFMEPQAVVNLNNKLREYQVQEKREVERILWELS 255
Query: 264 EKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVS 323
+K+ + + + + +LDVVNA+A Y+ T P I
Sbjct: 256 QKLMPYTNSLHQNHYVLARLDVVNAKALYANEINATEPII-------------------- 295
Query: 324 SSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNL 383
+R+ + L KA+HPLL D E A
Sbjct: 296 --DRQNHVALWKAWHPLL-------------DREKA------------------------ 316
Query: 384 SPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
V DI + + + +VITGPNTGGKTI LKTVG+ +MA+ GL+I
Sbjct: 317 ---------------VSNDIILGEEYQAIVITGPNTGGKTILLKTVGVIQLMAQMGLYIP 361
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ E ++V F +FADIGDEQS+ Q+LSTFS H+ I +I+ Q +SL+L+DEIG+GT+
Sbjct: 362 AGENSRVGIFTEIFADIGDEQSIEQNLSTFSSHMSNIVSILKQINDKSLLLIDEIGSGTD 421
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG++L +++L+ A S + IA+TH+ ELK Y NA MEFD L+PTY++
Sbjct: 422 PQEGSSLAIAILDYIASKQSYV-IASTHYPELKAYGYDRPKTINASMEFDGDTLQPTYQL 480
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
L G+PGRS+A +I++RLGLP I++ AR L ++N +I ++E+ + + + R
Sbjct: 481 LLGIPGRSNAFDISKRLGLPSIIIDQARGLLSEEDQDLNAMISDLEQKRRRAQRDADKMR 540
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFR--KVQKISDAAAIARSLVHKSAQQLCPSAS 681
H L LS L ++L + +++F+ K + + +A A SL+ +S S
Sbjct: 541 HQLELSTQLLEDLQK---------ETEQFKANKARLLEEAKERANSLIEQSKDDADKILS 591
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ R L QLR +QTTV EH + + D+K
Sbjct: 592 EIREL------QLRS----------------------KQTTVK--EHEMIEKKTALTDLK 621
Query: 742 QSP---------RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+VK + VG V V SFG++GT+++ + S EE VVQ+G +K +
Sbjct: 622 HEQALKKNKVLRKVKAKKALQVGQSVEVLSFGQRGTLVE-KVSDEEWVVQMGIIKMKIAI 680
Query: 793 TDI 795
D+
Sbjct: 681 EDL 683
>gi|291521669|emb|CBK79962.1| MutS2 family protein [Coprococcus catus GD/7]
Length = 793
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 212/805 (26%), Positives = 369/805 (45%), Gaps = 184/805 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWS--INQTYQDSLRLLDETNAAIEMQKH 109
++LR+LE+ K+ ++ +A + +G+E + S I++ Q + + ++A + K
Sbjct: 4 KALRILEYPKIIDMLTGYASSPMGKELCRNLMPSSDISEILQGQM---ETSDALTRVMKK 60
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRAS-PLRPNEALAVVALLQFSETLQLSLRA------- 161
GS S S IR++R + L+ + + LL + TL ++LRA
Sbjct: 61 GSLSF-----------SGIRDIRGSLLRLKVGSTVGMAELLNIAATLDVALRAKSYGRRE 109
Query: 162 AIKEDAD----LYIRFMPLTQMLYQLMDMLIRNEN-------------------NESLFL 198
A ED D L+ + PL+ + +++ +I E NE +
Sbjct: 110 ADDEDQDSLEGLFAQIEPLSNLNHEIRRCIIDEETMADDASPTLKSIRRQIKLTNERIHS 169
Query: 199 EVSSI------------------HGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSA 237
+++S+ +GR C+ A+ S +G++ S GS IEP++
Sbjct: 170 QLASMVSSQNIGSKLQDNLVTMRNGRYCLPVKAEYRSQVQGMIHDQSSTGSTLFIEPMAV 229
Query: 238 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 297
V LN++L++ + + E +L L+E +E+ + + +LD + A+A+ S ++
Sbjct: 230 VKLNNDLRELGSKEKEEIEHILDTLSELAGKSAVMLEQDIAVLTRLDFIFAKASLSRTYN 289
Query: 298 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
G+ P +F +E + I++ K HPLL K+K
Sbjct: 290 GSEP-VF--------------------NENGY-IHIKKGRHPLL---DKKKV-------- 316
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
VPID+ + + R+L++TGP
Sbjct: 317 -----------------------------------------VPIDLILGKDYRMLIVTGP 335
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKT+ LKTVGL +M ++GLHI + +++++ FD VFADIGDEQS+ QSLSTFS H+
Sbjct: 336 NTGGKTVSLKTVGLFTLMGQAGLHIPAFDHSELAVFDDVFADIGDEQSIEQSLSTFSSHM 395
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
I I++ + +++LVL DE+ AGT+P EG AL +++L+ + T+ATTH+ ELK
Sbjct: 396 TNIVRILNAADAKTLVLFDELCAGTDPTEGAALAIAILKTLLNR-HVTTMATTHYSELKV 454
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 597
+ + NAC EFD L PTY++L G+PG+S+A I+ +LGLP +++ A++
Sbjct: 455 FALTTEQVCNACCEFDVATLSPTYRLLIGIPGKSNAFAISGKLGLPAHIIEEAKKNIDVQ 514
Query: 598 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL-------HKNLLRTRRKILEHCASQ 650
E+I ++E + + E + +L H N+ + + +IL A++
Sbjct: 515 EQNFEELIADLETSRATIEKEQEELSAYKAQVESLKKRLEEKHDNITKQKERILNE-ANE 573
Query: 651 RFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN 710
+ + + + DA A + ++ +L S + + ++R +QS N
Sbjct: 574 KAQNI--LQDAKDYADHTI-RTMNKLSKSGGVDMKALEQERSRVRDKLNQS-------NN 623
Query: 711 QHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI 770
+ Q+ V D KQ GD VHV S KGTV+
Sbjct: 624 RKKAAPTAQKAKV-----------YAASDFKQ------------GDSVHVRSLDLKGTVV 660
Query: 771 KVEPSKEEIVVQVGNMKWIMKFTDI 795
SK E+ +Q+G +K + F+D+
Sbjct: 661 SQPNSKGELSIQMGILKSRIHFSDL 685
>gi|124022099|ref|YP_001016406.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9303]
gi|123962385|gb|ABM77141.1| putative DNA mismatch repair protein MutS family protein
[Prochlorococcus marinus str. MIT 9303]
Length = 828
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 229/823 (27%), Positives = 366/823 (44%), Gaps = 150/823 (18%)
Query: 16 FNTKSFAITNKNRRGRLFCSTVAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLG 75
+ + +++ R + S V +S S ++L+ LEW +LC ++ FA T G
Sbjct: 6 YGRDDWLLSSSVGRNSVEMSAVVMSSEVSTASLAFQDTLKQLEWPRLCEHLAGFASTLQG 65
Query: 76 REATLTQLWSINQTYQDSLRLLDET--NAAIEMQKHGSCSL----DL------------- 116
R Q S+ DS L ET A++ G S DL
Sbjct: 66 RRHC--QTLSLPADLSDSRLRLAETLEIGALDGLIDGGLSFQGVHDLGHILARCTKGGVA 123
Query: 117 TGVDLSLVK---SAIREVRRA---SPLRPNEALAVVALLQFSETLQLSLRAAIKED---- 166
+G +L V +A R +RR LRP + ++ + E L+ L+ A++E
Sbjct: 124 SGEELLAVADTLAAARRLRRQINDPELRPTISALLLDVATMPE-LERRLKFALEEGGRVA 182
Query: 167 -------ADLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLS-F 218
A L ++ L Q + +IR ++ HGR + A +S
Sbjct: 183 DRVSSKLAGLRRQWQGLRQERRDCLQEVIRRHAAMLQDTVIADRHGRPVLAVKAAAVSQL 242
Query: 219 KGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKM 276
GL+ SS GS + EP + L++ L + + + ++ VL L+ + I ++
Sbjct: 243 PGLVHDSSASGSTVFVEPQVVITLSNRLAELDGHIREQQQLVLAELSAAVAESGVSISRL 302
Query: 277 LNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKA 336
++QLD+ AR Y GG P + H + S L +
Sbjct: 303 GEVLLQLDLALARGRYGQWLGGVPPAL-----------HAEAAAPFS---------LQEL 342
Query: 337 YHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELA 396
HPLL+ QH+++ +A
Sbjct: 343 RHPLLVWQHRREHGEA-------------------------------------------- 358
Query: 397 HPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSV 456
VPI + ++ +V+ ITGPNTGGKT+ LK+VGLA++MA++GL + + +PW V
Sbjct: 359 -VVPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPWCAQV 417
Query: 457 FADIGDEQSLSQSLSTFSGHLKQIGNIIS---QSTSQSLVLLDEIGAGTNPLEGTALGMS 513
ADIGDEQSL Q+LSTFSGH+K+IG I+ + +LVLLDE+GAGT+P EGTAL +
Sbjct: 418 LADIGDEQSLQQNLSTFSGHVKRIGRILEALIEGPGPALVLLDEVGAGTDPSEGTALATA 477
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
LL A+ + LTIATTH G+LK LKY + FENA + FD + PTY++ WG+PGRS+A
Sbjct: 478 LLRTLADR-ARLTIATTHFGKLKALKYGDSRFENASVAFDSETMLPTYRLQWGIPGRSNA 536
Query: 574 INIAERLGLPGIVVQNARQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
++IA RLGL V+ A++L G E+NEVI +E ++ +A L + L
Sbjct: 537 LSIAMRLGLDDAVIAQAQELLGPCGDGEVNEVIRGLEEQRSLQQAAAEDAAALLARTELL 596
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
H+ LL +K + A + + QK+ + + V + ++L + S + Q
Sbjct: 597 HEELLSRWQKQRKQSADLQEQGRQKLESSIREGQKEVRQLIRRLREGRADGES-ARRAGQ 655
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+LR Q+ H + + QH+ P
Sbjct: 656 RLR--RIQADHRIQPQRKQHI-----------------------------------GWRP 678
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VG+ + + + GK VI + +++ V+ G M+ ++ + +
Sbjct: 679 EVGERIRLLALGKAAEVIAISEDGKQLTVRCGVMRSTVELSGV 721
>gi|308804283|ref|XP_003079454.1| DNA mismatch repair MutS family protein (ISS) [Ostreococcus tauri]
gi|116057909|emb|CAL54112.1| DNA mismatch repair MutS family protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 160/221 (72%), Gaps = 6/221 (2%)
Query: 394 ELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
+L PVP+DIF +++T+V+VITGPNTGGKT +K VGL +MAKSG+ I +E A VP+F
Sbjct: 453 KLRGPVPVDIFASKRTKVVVITGPNTGGKTAAMKAVGLVAIMAKSGIFI-PAERAVVPFF 511
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
D V DIGD+QSL SLSTFSG L + I+ Q T +SLVL+DE+G GT+P EG A+G +
Sbjct: 512 DKVLVDIGDDQSLLTSLSTFSGRLTRAQAILEQCTPESLVLMDEVGTGTSPAEGAAIGYA 571
Query: 514 LLEAFA-----ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVP 568
LL+A A + G+ LT ATTHHG+LK LKY ++ FENA +EFDE L+PTYK+LWGVP
Sbjct: 572 LLKALAGIVPGQLGACLTFATTHHGQLKALKYEHEEFENAAVEFDEADLRPTYKLLWGVP 631
Query: 569 GRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
GRSSA+ IA R L V++ AR++ G +++ I ++E
Sbjct: 632 GRSSALQIATRFNLSVDVIEEAREVLGEGLVSLDDTISKLE 672
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 59 WDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTG 118
WD ++ A T+LG+ A T +T + + R LDET AA+ M+ SLD G
Sbjct: 76 WDDARGFLAKRASTALGKAACET--LEPEETARAAERALDETAAAMAMESGFGVSLDFGG 133
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQ 178
+ + V+ A + R+ SPL +E A A L+ ++ L+ S+ + DL PL +
Sbjct: 134 MLTAEVRRAFYKTRQGSPLGGDELAATAAFLESAKRLKSSIE-GVTVSGDLPPALQPLRR 192
Query: 179 MLYQLMDMLIRNENNESL---------FLEVSSIHGRLC-IRTGADQLSFK--------- 219
++ DML E E++ F + +S R + GA + K
Sbjct: 193 IVR---DMLTHGELAETIRGAVDETGEFRDNASPELRRARSQKGAAEGKLKKAVQGKGTP 249
Query: 220 ----------------------GLLLSSSGIGSVIEPLSAVPLNDELQQARASVTKAEED 257
G L+ + + +IEP V LN EL QA + A +
Sbjct: 250 TVHQGRMVLAVAAPPPPEALVVGTLMGGAMV--LIEPPGIVTLNRELAQAVDAEKSAIDA 307
Query: 258 VLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLS 295
+ L+ ++ V +DE+ + ++ +++LDV+ A+ Y+ +
Sbjct: 308 IKRELSNQITVVVDELLECMDTVVKLDVIAAKCRYTFT 345
>gi|87125334|ref|ZP_01081180.1| MutS 2 protein [Synechococcus sp. RS9917]
gi|86167103|gb|EAQ68364.1| MutS 2 protein [Synechococcus sp. RS9917]
Length = 798
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 291/609 (47%), Gaps = 112/609 (18%)
Query: 44 DKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN-- 101
D++ + +++L +LEW +LC ++ FA T+ G+ L + + ++S L +
Sbjct: 5 DRRVDLWHDTLELLEWPRLCQHLAQFASTAAGQRRCLDE--PLPSDLRESRERLARSIEL 62
Query: 102 AAIEMQKHGSCSL----DLTGVDLSLVK----------------SAIREVRRA---SPLR 138
A ++ G S DL V L K +A R +RR LR
Sbjct: 63 AGLDGVVDGGLSFQGVHDLEPVLLRCCKGGTADGEALLAVADTLAAARRLRRQIDDPELR 122
Query: 139 PN-EAL--AVVALLQFSETLQLSL----RAAIKEDA---DLYIRFMPLTQMLYQLMDMLI 188
P AL V L + L+ SL R A + A L ++ + Q + +I
Sbjct: 123 PRCTALLKDVATLPDLEQRLKFSLEEGGRVADRASAVLAGLRGQWQTVRQQRRDRLQEVI 182
Query: 189 RNENNESLFLEVSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDEL 244
R ++ ++ HGR L ++ GA G++ SS GS + EP V L + L
Sbjct: 183 RRWASQLQDTVIAERHGRPVLAVKAGA-VAQCPGMVHDSSASGSTVFVEPRQVVDLGNRL 241
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
+ + E+ VL L+ + + + + ++ ++ LD+ RA Y G P +
Sbjct: 242 ADLEGRIREEEQRVLAELSAAVAAEGEALTRLGAVLLVLDLSLTRARYGQWLGAVPPQL- 300
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
++ E + L HPLL+ Q ++
Sbjct: 301 -------------------EADPEAPLVLHDLRHPLLVWQERR----------------- 324
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
GG A VPI + ++ RV+ ITGPNTGGKT+
Sbjct: 325 ----AGGGAV------------------------VPISVEVSSHLRVVAITGPNTGGKTV 356
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LK++GLA +MA++GL + S +PW V ADIGDEQSL QSLSTFSGH+K+IG I+
Sbjct: 357 TLKSIGLAALMARAGLWLPCSGRPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRIL 416
Query: 485 S---QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
+ +LVLLDE+GAGT+P EGTAL +LL + A+ + LTIATTH GELK LKYS
Sbjct: 417 EALHSGAAPALVLLDEVGAGTDPSEGTALATALLRSLADR-ARLTIATTHFGELKALKYS 475
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA-ASAE 600
+ FENA + FD L PTY++LWG+PGRS+A+ IA RLGL V+ A++L A +
Sbjct: 476 DPRFENASVAFDSDTLSPTYRLLWGIPGRSNALAIATRLGLDADVIAQAQELLAPRAEGD 535
Query: 601 INEVIIEME 609
+N VI +E
Sbjct: 536 VNAVIRGLE 544
>gi|385799733|ref|YP_005836137.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
gi|309389097|gb|ADO76977.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
Length = 791
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 282/595 (47%), Gaps = 135/595 (22%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
SF G++ S+SG+ +EP++ V LN++L++ +A + +L L+ K+ + I+
Sbjct: 214 SFDGIVHGQSASGLTLFMEPMAVVRLNNQLREVQAKENVEIQRILQMLSSKIAQSENIIK 273
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ L I LD + A A +SL F P + I L
Sbjct: 274 RNLMIISNLDSLAAAAKFSLDFDCNQPEV----------------------NESGIIELK 311
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL GE+
Sbjct: 312 KARHPLL-----------------------------------GEE--------------- 321
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
PVPID+ + LVITGPNTGGKT+ LKTVGL +M ++GLHI ++ + + F+
Sbjct: 322 ---PVPIDLKLGNDIATLVITGPNTGGKTVALKTVGLLTLMTQTGLHIPAAANSTISIFN 378
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ +I +++S + +LVL+DE+G GT+P EG ALG+S+
Sbjct: 379 KIFADIGDEQSIEQSLSTFSSHMHRIRKFLAESDNSTLVLMDELGVGTDPEEGAALGISI 438
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE E + TIATTH+ +LK+ Y + ENA +EFD LKPTYK++ GVPG S+A
Sbjct: 439 LEKLQEKKA-TTIATTHYSQLKSYAYGTEEVENASVEFDLDTLKPTYKLIMGVPGGSNAF 497
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEM--ERFKTQFLEHVHEARHFLMLSRNL 632
IA RLG+P ++ AR L ++ ++I E+ ER + Q L H EA
Sbjct: 498 EIALRLGIPEEIIDRARSLLSEEEIKVEDIINELNQERNRYQKLRHEMEA---------- 547
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
R R+ + + + K +++ + +A ++V
Sbjct: 548 -----------------YRNREKELKEKYEKMIKEQQQKHEEEIQAARKEAEAIV----T 586
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+ + A + + K GKN + Q++ VD+ A +S +D+K+ +V E
Sbjct: 587 ETKKEAKRIISNLK-GKNYN------QRSEVDR------AQTSANQDLKELSQVLEAENE 633
Query: 753 -----------NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
VGD V V S G+KG +I ++ K+E +Q G M+ D+V
Sbjct: 634 KEEAKISASKFEVGDQVRVHSIGRKGEIINIDQDKKEAKIQAGIMQVTASLADLV 688
>gi|159902779|ref|YP_001550123.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9211]
gi|159887955|gb|ABX08169.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9211]
Length = 805
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 307/605 (50%), Gaps = 120/605 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLG-REATLTQLWSINQTYQDSLRLLDET---------- 100
E+L +L+W LC+ +S+FA T+ G RE + I Q + + + L ET
Sbjct: 19 ETLELLDWRILCNHLSTFAPTAKGKRECKNIE---IPQDIETTRKRLSETLEIGTLDKNL 75
Query: 101 NAAIEMQK---------HGSCSLDLTGVDLSLVKSAIREVRRASPL------RPNEALAV 145
A I Q H S +G +L + +R VRR + RP
Sbjct: 76 EAGISFQGVNELDGVILHCSKGGIASGEELLSIAETLRAVRRLKKIFEDPVSRPYTTSLF 135
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFM-PLTQMLYQLMDMLIRNEN--------NESL 196
+ L E L+ L I+E + R L+Q+ L D+ I + N S+
Sbjct: 136 IDLATHHE-LEKVLLFGIEEGGRVADRASNQLSQLRRHLQDLRIGRRSILQDLIRRNGSI 194
Query: 197 FLE--VSSIHGR--LCIRTGA-DQLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARA 249
+ ++ +GR + ++ G+ DQ+ G++ SS G+ I EP + L +++ + +
Sbjct: 195 LQDTVIAERYGRPVIAMKVGSVDQVP--GVVHDSSSSGNTIFLEPQIVISLGNQIVEIQT 252
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
++K EE +L ++ + +++ + + + ++QL++ ARA Y GG P I +D
Sbjct: 253 KISKEEERLLSIWSQLVAKNINSLNHLSSVLLQLELGLARARYGDWLGGVLPVITTKED- 311
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAY-HPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
+P +L K + HPLLL WK+ K
Sbjct: 312 ------DP--------------FLIKDFSHPLLL----------WKN-----------KK 330
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
GG+ +PI +++ +V+ ITGPNTGGKTI LK+
Sbjct: 331 LGGHKV------------------------IPITFDVSKGLKVVAITGPNTGGKTIALKS 366
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG---NIIS 485
GLAV+MA+ G+ + S +PW + V ADIGDEQSL Q+LSTFSGH+ +I ++I+
Sbjct: 367 FGLAVLMARCGMLLPCSSEPTLPWCNQVLADIGDEQSLEQNLSTFSGHIARIVRILDVIA 426
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
QS ++VLLDE+GAGT+P EG+A+ +SLL A A+S LTIATTH GELK LKYS+ F
Sbjct: 427 QSPGPTVVLLDEVGAGTDPTEGSAIAISLLRALADSAR-LTIATTHLGELKALKYSDSRF 485
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS-AEINEV 604
ENA + FD ++PTY +LWG+PGRS+A+ IA RLGL + + A++L G ++N+V
Sbjct: 486 ENASVAFDSETIRPTYHLLWGIPGRSNAVAIAIRLGLDSQITETAKKLIGPKGLQDVNQV 545
Query: 605 IIEME 609
I+ +E
Sbjct: 546 ILGLE 550
>gi|73662960|ref|YP_301741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|123642323|sp|Q49WR1.1|MUTS2_STAS1 RecName: Full=MutS2 protein
gi|72495475|dbj|BAE18796.1| MutS-like protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 782
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 194/626 (30%), Positives = 310/626 (49%), Gaps = 117/626 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++++ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIKQNLDKIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNAR 289
IEP S V +++++ + + E +L ALT ++ + D I + + G Q+D + A+
Sbjct: 226 IEPSSIVEMSNQISRLKNDEAIERERILSALTVEVAEEADACLISESIMG--QIDFLTAK 283
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y+ S GT P ++ T+YLPKA+HPLL KQ
Sbjct: 284 ARYASSIKGTKPQFT----------------------KDRTVYLPKAFHPLL---DKQTV 318
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
ANT I A+
Sbjct: 319 --------VANT-----------------------------------------IEFAQDI 329
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QS
Sbjct: 330 ETVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQS 389
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFS H+K I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +AT
Sbjct: 390 LSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MAT 448
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q
Sbjct: 449 THYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQK 508
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+ + G EINE+I +E + E E + L +++ H L + + H
Sbjct: 509 AKSMIGQDEQEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNH--- 565
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
+ Q +++A + A Q SA++ + K ++LR +
Sbjct: 566 ----EKQLMNEAK--------EKANQRVKSATKEADDILKELRELRDQKGADV------- 606
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+H L +Q D+ E K +KQ+ + K+ + N GD V V ++G+KG V
Sbjct: 607 KEHELIDKKKQLD-DQYE---------AKSLKQNVQKKKWDEINAGDEVKVLTYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ E VVQ+G +K + D+
Sbjct: 657 LEL-IDNNEAVVQMGIIKMKLPLEDL 681
>gi|418576544|ref|ZP_13140678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324965|gb|EHY92109.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 782
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/626 (30%), Positives = 310/626 (49%), Gaps = 117/626 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++++ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIKQNLDKIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNAR 289
IEP S V +++++ + + E +L ALT ++ + D I + + G Q+D + A+
Sbjct: 226 IEPSSIVEMSNQISRLKNDEAIERERILSALTVEVAEEADACLISESIMG--QIDFLTAK 283
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y+ S GT P ++ T+YLPKA+HPLL KQ
Sbjct: 284 ARYASSIKGTKPQFT----------------------KDRTVYLPKAFHPLL---DKQTV 318
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
ANT I A+
Sbjct: 319 --------VANT-----------------------------------------IEFAQDI 329
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QS
Sbjct: 330 ETVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQS 389
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFS H+K I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +AT
Sbjct: 390 LSTFSSHMKNIVEILHDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MAT 448
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q
Sbjct: 449 THYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQK 508
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+ + G EINE+I +E + E E + L +++ H L + + H
Sbjct: 509 AKSMIGQDEQEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNH--- 565
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
+ Q +++A + A Q SA++ + K ++LR +
Sbjct: 566 ----EKQLMNEAK--------EKANQRVKSATKEADDILKELRELRDQKGADV------- 606
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+H L +Q D+ E K +KQ+ + K+ + N GD V V ++G+KG V
Sbjct: 607 KEHELIDKKKQLD-DQYE---------AKSLKQNVQKKKWDEINAGDEVKVLTYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ E VVQ+G +K + D+
Sbjct: 657 LEL-IDHNEAVVQMGIIKMKLPLEDL 681
>gi|406669612|ref|ZP_11076880.1| MutS2 family protein [Facklamia ignava CCUG 37419]
gi|405582954|gb|EKB56928.1| MutS2 family protein [Facklamia ignava CCUG 37419]
Length = 786
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 325/687 (47%), Gaps = 146/687 (21%)
Query: 105 EMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIK 164
E+++ ++D G+ L S + +RRA L+ ++++ +L IK
Sbjct: 132 EIEQRIDQTVDSDGIILDTASSELNRIRRAQ-------------LRTEQSIRETLNTIIK 178
Query: 165 EDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGAD-QLSFKGLLL 223
A+L L D LI N R I D + FKG +
Sbjct: 179 SKANL-------------LSDTLITIRNQ------------RYVIPVKTDYRAQFKGTVY 213
Query: 224 SSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGII 281
S G IEP S LN++L R+ + +L +TE++ L EI + +
Sbjct: 214 DQSSTGQTLFIEPQSVTNLNNQLAALRSEEKVEVDRILDEVTEQLLPYLSEINQNHYALG 273
Query: 282 QLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLL 341
LD V ARA YSL+ GT P + S ERE I+ +A HPL
Sbjct: 274 YLDYVQARAEYSLAIEGTKPTL--------------------SPEREVRIW--QARHPL- 310
Query: 342 LQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPI 401
+ P ++ V
Sbjct: 311 -----------------------------------------IDPKQI----------VAN 319
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + L+ITGPNTGGKTI LKT+G+ +M +SGL+I + E +++ FD V+ADIG
Sbjct: 320 DILIGGDYQSLIITGPNTGGKTILLKTLGMLQIMGQSGLYIPAEEASQIGIFDQVYADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +II ++T QSL+LLDE+G+GT+P EG AL M++L+ F
Sbjct: 380 DEQSIEQNLSTFSSHMTNIVSIIQRATYQSLILLDELGSGTDPQEGAALAMAILDYFQSV 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
GS++ +ATTH+ ELK +NA MEF++ L PTY++L G+PGRS+A+ I++RLG
Sbjct: 440 GSIV-LATTHYPELKVYANHAANTQNASMEFNDQTLSPTYRLLIGIPGRSNALEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+ S ++N++++++++ + + E + + +L ++ L
Sbjct: 499 LRSDIIEKAQSGVQQESQQLNDMVMQLDQERREMEEEHQQTQRYLDDAQTL--------- 549
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQ 700
L+ + + + D A A+ ++ Q + +A ++ R QL S+ Q
Sbjct: 550 --LDRLKDEYQQWLNAKEDLMAQAK---REANQYIEAKKEEAEKIISDIRDLQLEQSSQQ 604
Query: 701 SLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ +H N ++ D E + V++ K+ R++ VGD V V
Sbjct: 605 PI-------KEHTFIEN-KKRLGDLTEPERLKKNKVLQRAKKQQRIE------VGDEVEV 650
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMK 787
++ ++GT++++ PS +E +VQ+G MK
Sbjct: 651 LAYQQRGTIVEI-PSSKEYIVQMGVMK 676
>gi|255083879|ref|XP_002508514.1| predicted protein [Micromonas sp. RCC299]
gi|226523791|gb|ACO69772.1| predicted protein [Micromonas sp. RCC299]
Length = 1064
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 213/409 (52%), Gaps = 36/409 (8%)
Query: 398 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 457
P P+D+F+ R +VITGPNTGGKT +K VGLA +MA+SGL + +E A++PWFDSV
Sbjct: 513 PAPVDVFVPLNARCVVITGPNTGGKTAAMKAVGLASLMARSGLFV-PAEMARLPWFDSVL 571
Query: 458 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 517
DIGD Q L QSLSTFS L + I+S + SLVL+DE+G GT+P EG A+G +LLE
Sbjct: 572 VDIGDSQDLMQSLSTFSARLAKQRAILSAAGPDSLVLMDEVGTGTSPAEGAAIGGALLER 631
Query: 518 FAESG--------SLLTIATTHHGELKTLKY--SNDFFENACMEFDEVKLKPTYKILWGV 567
A G + LT+ATTHHGELK LKY +FENA +EFDE L PTY++LWGV
Sbjct: 632 LAGVGAGGTDFNRAGLTLATTHHGELKALKYEHPGGYFENAAVEFDEAALAPTYRLLWGV 691
Query: 568 PGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM 627
PGRS A+ IAER GL VV +AR G A + E I +E + E + A L
Sbjct: 692 PGRSRALQIAERFGLEPAVVDDARAALGEGRATLEETIGALESARRGADEDIKRALSLLW 751
Query: 628 LSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
N+ RT +I + + A+ IAR+ + +L A +A+
Sbjct: 752 -------NVDRTAPRIAAAQARVDAAEEAADVKLASGIARAGRERK-TRLAADARRAQVE 803
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
V + + ++ + T + + K+ PA +V
Sbjct: 804 VAREKRGAALASGATDFATAAAAARAAEAEAERAAAAAKLRPPA--------------KV 849
Query: 747 KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
P+VGD V V + G +G V KV S + VQ G M+ + D+
Sbjct: 850 PSGWCPDVGDPVVVLTTGMQGKVRKVAGSA--VTVQAGLMQLKVDVADV 896
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 39/292 (13%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
+SL W +L ++ +A T LG+EA +Q + LLDET AA+ M+ H
Sbjct: 61 QSLEACGWGELLEDLAEYASTRLGQEAVRVMQPPEGGAWQSEM-LLDETEAAMVMENHLG 119
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
S+D G+ + V+ A+ + + + L +E A+VA + + L+ ++ + +
Sbjct: 120 ASIDFGGIMSAEVRRALYKAEKYASLGGDELAAMVAFIASAARLKKTVE-NVAVNGVPPP 178
Query: 172 RFMPLTQMLY------QLMDMLIRNENNESLFLE-------------------------- 199
PL ++ ++ D + + +++ F +
Sbjct: 179 ELAPLRNIVAAMAPRPEVADAIKQCVDDQGGFKDGASPELRRARSQRAAAEAKLRRALQN 238
Query: 200 ----VSSIHGRLCIRTGADQLSFKGLLLSSSGIGSV-IEPLSAVPLNDELQQARASVTKA 254
V++ GR+ + + ++ ++G G V IEP V LN +L Q AS A
Sbjct: 239 ANGQVTTHQGRVVLAVTPPAPAGALVVGVAAGGGLVLIEPPGVVLLNGQLAQCVASEESA 298
Query: 255 EEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+ + LT + ++ L+ + +LDV+ ARA + + P +P
Sbjct: 299 IDAIRRRLTNTVAAATPDLFVALDVVTRLDVIAARARQASAMNACRPTFVIP 350
>gi|334118052|ref|ZP_08492142.1| MutS2 protein [Microcoleus vaginatus FGP-2]
gi|333460037|gb|EGK88647.1| MutS2 protein [Microcoleus vaginatus FGP-2]
Length = 909
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 232/461 (50%), Gaps = 107/461 (23%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ I RV+ ITGPNTGGKT+ LKT+GLA +MAK+G+ + + E ++PWFD++ A
Sbjct: 367 VPVDLTIGPHIRVVAITGPNTGGKTVTLKTLGLAALMAKAGMFVAAREPVELPWFDNILA 426
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNII-------------------------------SQS 487
DIGDEQSL QSLSTFSGH+++I I+ +Q+
Sbjct: 427 DIGDEQSLQQSLSTFSGHIRRISRILEVLGNKSQAEGEETSNLPITNSQQQDQEVTDTQN 486
Query: 488 TSQSLVLL---------------------------DEIGAGTNPLEGTALGMSLLEAFAE 520
T +L +L DE+GAGT+P EG+AL ++LL+ A+
Sbjct: 487 TVSALPILKPKLQIPKAQSPISNSQLAIPKSLVLLDEVGAGTDPSEGSALAIALLQYLAQ 546
Query: 521 SGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERL 580
SLLT+ATTH GELK LKY + FENA +EFD+ ++PTY++LWG+PGRS+A+ IA+RL
Sbjct: 547 H-SLLTVATTHFGELKALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRL 605
Query: 581 GLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTR 640
GL +V+ A+ G AS ++N+VI +E + + EA L + LH+ + +
Sbjct: 606 GLLASIVEEAQTYVGGASQDVNQVIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKA 665
Query: 641 RKILEHCASQRFRKVQKISDAAAIARSLVH------KSAQQLCPSASQARSLVHKRAQQL 694
+ E + + +++A A+S + +S Q +A QA +++ +++
Sbjct: 666 AALQERERELKIAQEVAVNEAIGSAKSEIAQIIRRLQSGNQTAQNAQQATDTLNQISEKH 725
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
PS Q PA S +P V
Sbjct: 726 LPSRQQ----------------------------PAKPKPSF--------------MPKV 743
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD + + S G+ V+ + EE+ V+ G MK +K +I
Sbjct: 744 GDRIRIPSLGQTAEVLSGPDANEELSVRFGIMKMTVKLGEI 784
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 42/292 (14%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+L +LEW +LC +++FA T LG A L I T + LL +T+ A +++
Sbjct: 14 ETLELLEWPRLCQHLATFAATKLGVAAALD--LPIPATQAQTAELLAQTHEAYQLESRAG 71
Query: 112 CSLDLTGVD----------------------LSLVKSAIREVRR--------------AS 135
+L G+ ++ + R++RR A+
Sbjct: 72 GALSFEGIQDIGTSLQRAELQGLLSGEELLAIATTLAGARQLRRIIDSQADVPTLKELAA 131
Query: 136 PLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNES 195
LR L + Q++ RA K A + ++ L +YQ++ +++ ++N
Sbjct: 132 QLRTYPELEQEIHRCIDDRAQVADRATPKL-AGIRVQMRQLRDRIYQILQGILQRQSNAV 190
Query: 196 LFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVT 252
++ GR I A Q + G++ SS G+ +EP S V LN++++Q
Sbjct: 191 QEQLITQRSGRFVIPVKAPQKDAIPGIVHDSSASGATLYVEPHSTVNLNNQMRQFLRQEQ 250
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
EE V ALTE++ ++++++ + LD+ A+A YS P
Sbjct: 251 AEEEAVRRALTEQVAAVKPDLDRLVVVVTTLDLAAAKARYSFWLQANPPKFI 302
>gi|223043809|ref|ZP_03613852.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|417907533|ref|ZP_12551304.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
gi|222442906|gb|EEE49008.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|341595562|gb|EGS38205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
Length = 782
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 307/624 (49%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D ++++++N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT ++ V+ D I + + Q+D + A+A
Sbjct: 226 IEPSSVVEMNNQISRLRNDEAVERERILTELTGQVAVEADSILIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P ++E T+YLP A+HPLL
Sbjct: 286 YARSIKGTKPTF----------------------KKERTVYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
+K+T +S + +E V
Sbjct: 314 --------------------------DKETVVS------NTIEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSILDYVRNLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EF+ L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +ER + E E + ++ H L + ++ + S
Sbjct: 511 TMIGTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQETHDALAKQYQQYQNYEQSLM 570
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+K A Q SA++ + K + LR + + +
Sbjct: 571 NEAKEK---------------ANQRVKSATKEADTILKELRDLRDNKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K IKQS + K+ + N GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------AKSIKQSVQKKKYDKINAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ ++E VVQ+G +K + D+
Sbjct: 659 L-VGEDEAVVQMGIIKMKLPIEDL 681
>gi|242373376|ref|ZP_04818950.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
gi|242348739|gb|EES40341.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
Length = 782
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 186/624 (29%), Positives = 306/624 (49%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D ++++++N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT ++ + D + + + Q+D + A+A
Sbjct: 226 IEPSSVVEMNNQISRLRNDEAVERERILTELTGQVAAEADALLIAESVMGQIDFLTAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P ++E T+YLP A+HPLL
Sbjct: 286 YARSIKGTKPTF----------------------KKERTVYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
K+ ANT +E V
Sbjct: 314 -NKETVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL + + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSVFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSILDYVRNLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +ER + E E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQETHDALSK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K + LR + + ++ +
Sbjct: 565 YEK--SLMDEA-------KEKANQRVKSATKEADSILKELRDLRDNKGVEVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + K+ + N GD V V S+G+KG V++
Sbjct: 616 KQLDEQYEE-----------------KSIKQNVQKKKYDKINAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ ++E VVQ+G +K + D+
Sbjct: 659 L-VGEDEAVVQMGIIKMKLPIEDL 681
>gi|427712156|ref|YP_007060780.1| MutS2 family protein [Synechococcus sp. PCC 6312]
gi|427376285|gb|AFY60237.1| MutS2 family protein [Synechococcus sp. PCC 6312]
Length = 817
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 231/445 (51%), Gaps = 73/445 (16%)
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
+S +G IEP + V LN+ L+Q + E + L++++ + E+++ L I Q
Sbjct: 236 VSVTGATLYIEPQAIVELNNRLRQLARQGGQEEYRIREVLSQQVTEVVLELQQGLELITQ 295
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LD+ ARA Y L P F+ D EP I+L HPLL+
Sbjct: 296 LDLAVARARYGLWLNANIPR-FVELD-------EP-------------IHLRNLRHPLLI 334
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
QH Q+ P+ VPI
Sbjct: 335 WQHHQEQ----------------------------------GPTV-----------VPIT 349
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
+ IA T+V+ ITGPNTGGKT LKT+GL +MAK+GL I ++E ++PWF V ADIGD
Sbjct: 350 VDIAPPTKVVTITGPNTGGKTATLKTLGLVALMAKAGLMIPAAEPVELPWFRQVLADIGD 409
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQ------SLVLLDEIGAGTNPLEGTALGMSLLE 516
EQSL +LSTFSGH++ I I+ T++ +LVLLDE+GAGT+P EGTAL ++LL
Sbjct: 410 EQSLQHNLSTFSGHIRTISEILEALTTEANPDNAALVLLDEVGAGTDPSEGTALAIALLT 469
Query: 517 AFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINI 576
A+ +TIATTH+GELK LKY + FENA +EFD L PTY++LWG+PGRS+A+ I
Sbjct: 470 HLADQAQ-ITIATTHYGELKALKYQDPRFENASVEFDSETLAPTYRLLWGIPGRSNALAI 528
Query: 577 AERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
A+RLGL V+ A Q A ++N+VI +E + A L + LH+ L
Sbjct: 529 AQRLGLNPDVIAAAAQALPADQDQVNQVIAGLEAQRRHQEAKASTASQLLSATEKLHQEL 588
Query: 637 LRTRRKILEHCASQRFRKVQKISDA 661
L ++ + R + Q ++ A
Sbjct: 589 LTKTEQLRQRELHLRQHQAQAVNTA 613
>gi|70726818|ref|YP_253732.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus haemolyticus JCSC1435]
gi|82592981|sp|Q4L5E9.1|MUTS2_STAHJ RecName: Full=MutS2 protein
gi|68447542|dbj|BAE05126.1| MutS-like protein [Staphylococcus haemolyticus JCSC1435]
Length = 783
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 300/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++++ N+ + ++ + R I A+ + FKG++ S+SG
Sbjct: 167 NQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + Q+D + A+A
Sbjct: 227 IEPSSIVEMNNQISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P + ++ T+YLP AYHPLL
Sbjct: 287 YARSIKGTKPTFY----------------------KDRTVYLPNAYHPLL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT I
Sbjct: 315 -NKDTVVANT-----------------------------------------IEFVDDIET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SLVL DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH
Sbjct: 393 TFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+ +LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E L +R H + LEH Q
Sbjct: 512 TMIGTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEARKTHDD--------LEHQYEQY 563
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+K+ D A + A Q SA++ + K + LR + +
Sbjct: 564 KSYEKKLMDEAK-------EKANQRVKSATKEADSILKELRTLRDQKGADV-------KE 609
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K +KQ+ + ++ + + GD V V S+G+KG V
Sbjct: 610 HELIDKKKQLD-DQYE---------AKSLKQNVQKQKYDEIHAGDEVKVLSYGQKGEV-L 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
S+EE VVQ+G +K + D+
Sbjct: 659 ELVSEEEAVVQMGIIKMKLPIEDL 682
>gi|224476251|ref|YP_002633857.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus carnosus subsp. carnosus TM300]
gi|254766600|sp|B9DPU2.1|MUTS2_STACT RecName: Full=MutS2 protein
gi|222420858|emb|CAL27672.1| MutS2-like protein [Staphylococcus carnosus subsp. carnosus TM300]
Length = 782
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 305/629 (48%), Gaps = 113/629 (17%)
Query: 172 RFMPLTQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSS 226
R +Q + Q +D ++++++N+ + ++ + R I A+ + F G++ SSS
Sbjct: 161 RIHSTSQRIKQNLDRIVKSQSNQKKLSDAIITVRNDRHVIPVKAEYRQDFNGIVHDQSSS 220
Query: 227 GIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVV 286
G IEP + V +N+++ + R E +L L+ ++ + D + + Q+D +
Sbjct: 221 GQTLYIEPSAVVEMNNKISRLRNDEKVEVERILSVLSGEVAAEADACLIAESVMGQIDFL 280
Query: 287 NARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHK 346
A+A Y S GT P E +YLPKA+HPL
Sbjct: 281 TAKARYGQSIKGTKPEFT----------------------EERNVYLPKAFHPL------ 312
Query: 347 QKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIA 406
L+ A V I A
Sbjct: 313 ----------------------------------------------LDRATVVANTIEFA 326
Query: 407 RKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSL 466
+ ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +K+ FD+V+ DIGDEQS+
Sbjct: 327 EDIQTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVFDNVYCDIGDEQSI 386
Query: 467 SQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLT 526
QSLSTFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ + GSL+
Sbjct: 387 EQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGAALAMSILDHVQKLGSLV- 445
Query: 527 IATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIV 586
+ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I+ +LGL G +
Sbjct: 446 MATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAFEISSKLGLSGNI 505
Query: 587 VQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEH 646
++ A+ L G EIN +I +E + + E L ++ +H +L + ++
Sbjct: 506 IREAKSLIGQDEQEINNMIASLETNAKKVEDQRIELDRLLREAKQVHGDLNK------KY 559
Query: 647 CASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTK 706
Q + K Q + DA K+ Q++ + +A ++ K + +R + + +
Sbjct: 560 EQYQNYEK-QLMDDAKV-------KANQRVKAATKEADDII-KDLRHMRDEKNAEVKEHE 610
Query: 707 VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKK 766
+ + + L ++ T DIKQ+ + ++ + GD V V ++G+K
Sbjct: 611 LIEKRKHLDEQYEGT-----------------DIKQNVKKQKWDEIQAGDEVKVLTYGQK 653
Query: 767 GTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G V+++ +E VVQ+G +K + D+
Sbjct: 654 GEVLEI-LDDDEAVVQMGIIKMKLPIADL 681
>gi|375084730|ref|ZP_09731589.1| MutS2 family protein [Megamonas funiformis YIT 11815]
gi|374567865|gb|EHR39064.1| MutS2 family protein [Megamonas funiformis YIT 11815]
Length = 789
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 183/576 (31%), Positives = 270/576 (46%), Gaps = 114/576 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP+S V LN++++Q + E +L ++EK+ + D + + QL
Sbjct: 213 SSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQL 272
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D A+A + T P I E + L KA HPLL
Sbjct: 273 DFAFAKAKLARKMHATMPEI----------------------NDEGIVNLAKARHPLL-- 308
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
KD + VPIDI
Sbjct: 309 ----------------------------------NKD----------------NVVPIDI 318
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ R L+ITGPNTGGKT+ +KT+GL V+M +SGL I +K+ F +V+ADIGDE
Sbjct: 319 RLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDE 378
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H++ I NI++ L+LLDE+G+GT+P EG AL MS+LE + G+
Sbjct: 379 QSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMDIGA 438
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
T+ATTH+ ELKT YS + ENAC+EFD L+PTY++L G PG S+A I++RLGL
Sbjct: 439 -CTVATTHYNELKTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLS 497
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++ A+QL A A+ V+ +E K + E ++ + R
Sbjct: 498 DTLILRAQQLIKADHAQFENVLNTLENEKLMY-----EQKNADIAER------------- 539
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
QR K++K A + + + K Q L + Q SL+ + R + + +
Sbjct: 540 -----QQRIEKLEK--QLADMKQEMAKKKEQTLRKTKEQCASLLRR----TRRESEEIIK 588
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN-----VGDLV 758
K N + +Q T+D H V P K E + VGD+V
Sbjct: 589 ELKAQFNDQGMKK--RQETIDAARHKLRGRLDKVSQQNDDPN-KPGEAVDIKTIAVGDIV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
+V+ +KGT+ + S +E+ VQ+G++K +K D
Sbjct: 646 YVNKLRQKGTITDI--SGKELTVQLGSLKMNVKAKD 679
>gi|314933341|ref|ZP_07840706.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
gi|313653491|gb|EFS17248.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
Length = 782
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 304/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D ++++++N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT ++ VD D I + + Q+D + A+A
Sbjct: 226 IEPTSVVEMNNQISRLRNDEAVERERILTELTGQVAVDADSILIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ S GT P ++E T+YLP A+HPLL
Sbjct: 286 YARSIKGTKPTF----------------------KKERTVYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
K+ ANT +E V
Sbjct: 314 -DKETVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL + + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSILDYVRNLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EF+ L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNCEGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +ER E E + ++ H L + ++ + S
Sbjct: 511 TMIGTDEQEINSMIESLERNSKCVDEQRIELDRLVREAQETHDALAKQYQQYQNYEQSLM 570
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+K A Q SA++ + K + LR + + +
Sbjct: 571 NEAKEK---------------ANQRVKSATKEADTILKELRDLRDNKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K IKQ+ + K+ + N GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------AKSIKQTVQKKKYDKINAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ ++E VVQ+G +K + D+
Sbjct: 659 L-VGEDEAVVQMGIIKMKLPIEDL 681
>gi|312143799|ref|YP_003995245.1| MutS2 family protein [Halanaerobium hydrogeniformans]
gi|311904450|gb|ADQ14891.1| MutS2 family protein [Halanaerobium hydrogeniformans]
Length = 790
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 216/400 (54%), Gaps = 78/400 (19%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S+SG+ +EP++ V LN++L++ RA + + +L L+ K+ + I+K
Sbjct: 215 FDGIIHGQSASGLTLFMEPMAVVRLNNQLREVRAQESAEIQRILQVLSSKIAEQAEIIKK 274
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
L I LDV++A A +SL +P+I +E I L +
Sbjct: 275 DLKIISHLDVISASARFSLDHDCNAPDI----------------------NQEGLIDLKE 312
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPLL ++
Sbjct: 313 ARHPLLKEE--------------------------------------------------- 321
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
PVPID+ + + LVITGPNTGGKT+ LKTVGL +MA++G+HI + + + F
Sbjct: 322 --PVPIDVQLGDQISTLVITGPNTGGKTVSLKTVGLLTLMAQTGMHIPAKANSTIAVFKK 379
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGDEQS+ QSLSTFS H+ +I +++S S +LVL+DE+G GT+P EG ALG+S+L
Sbjct: 380 VFADIGDEQSIEQSLSTFSSHMTKIKEFLAESDSNTLVLMDELGVGTDPEEGAALGISIL 439
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E + G+ +TIATTH+ +LK+ Y D ENA +EFD L+PTY ++ GVPG S+A
Sbjct: 440 EELQQKGA-VTIATTHYSQLKSYAYGADNVENASVEFDIESLRPTYNLIMGVPGGSNAFE 498
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
IA RLG+P +++ AR L ++ ++I E+ + + ++
Sbjct: 499 IALRLGIPEGIIKRARSLLTEEEIKVEDIINELNQERKRY 538
>gi|365158083|ref|ZP_09354324.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
gi|363621912|gb|EHL73094.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
Length = 784
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 187/573 (32%), Positives = 281/573 (49%), Gaps = 109/573 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP S V LN++L+Q + + E +L L+ K+Q + DE+ ++ + L
Sbjct: 217 SSSGQTLFIEPESIVQLNNQLKQLKLKEQEEIEKILRELSAKVQENADELLVIVQVMGDL 276
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A + S + P + RE I + +A HPL
Sbjct: 277 DFIFAKAKLAKSMKASKPLM----------------------NREGYIRIHQARHPL--- 311
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L + VP DI
Sbjct: 312 -------------------------------------------------LPIEEAVPNDI 322
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ + +VITGPNTGGKT+ LKT+GL +MA+SGL I + E +++ F SVFADIGDE
Sbjct: 323 ELGKDYTAIVITGPNTGGKTVTLKTIGLLTLMAQSGLQIPAQEGSEMAVFHSVFADIGDE 382
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+ + T +SLVL DE+GAGT+P EG AL +S+L+ E G+
Sbjct: 383 QSIEQSLSTFSSHMVNIVDILKEVTGESLVLFDELGAGTDPQEGAALAISILDEVLEVGA 442
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK Y+ D NA +EF+ L PTY++L GVPGRS+A I+ERLGL
Sbjct: 443 RV-VATTHYPELKAYGYNRDGVINASVEFNVETLSPTYRLLIGVPGRSNAFEISERLGLN 501
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
+++ ARQ GA + E+ +I +ER + + EAR +L + L K+L ++
Sbjct: 502 HKIIERARQYTGADTNEVENMIASLERSRKLAEKEEQEARDYLKSAEKLLKDLQNQMQEF 561
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
E +K + S A A +V K+ ++ R L
Sbjct: 562 YE-------KKEEMYSRAEREASKIVEKAKEEAEEIIRHLRKL----------------- 597
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
++ KN V + ++ + + A + K Q P+ KR+ GD V V SF
Sbjct: 598 --RLEKNAEVK----EHELIEARKRLSDAMPEIDKKTPQ-PKAKRSRSFMPGDEVKVLSF 650
Query: 764 GKKGTVI-KVEPSKEEIVVQVGNMKWIMKFTDI 795
G+KGT++ KV+ + E +VQVG +K + +D+
Sbjct: 651 GQKGTILEKVDGN--EWLVQVGILKMNVNESDL 681
>gi|297840849|ref|XP_002888306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334147|gb|EFH64565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 891
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 233/817 (28%), Positives = 381/817 (46%), Gaps = 155/817 (18%)
Query: 42 SDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLD--- 98
SDD +S V ++L VLEW LC+ ++ FA TS+G AT + + ++S LLD
Sbjct: 48 SDDSQS-VENQTLEVLEWRALCNQLAPFASTSMGLSATKNAEIPVGNSPEESRNLLDETA 106
Query: 99 --------------------ETNAAIEMQKHGS-------CS-----LDLTGVDLSLVKS 126
+ + +E G CS + T V L K+
Sbjct: 107 AALAAMEMMESQRLGLSEIQDLSDIVERAVAGQLLTVRELCSVRSTLMAATSVFQKLRKA 166
Query: 127 AIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDM 186
AI + +R SPL + +V F +TLQ + I D ++ + ++ L +
Sbjct: 167 AISD-KRVSPL-----VGLVQGCDFKDTLQQKIGFCI--DCNMSMILDRASEDLEIIRSE 218
Query: 187 LIRN-ENNESLFLEVSSI---------------HGRLC--IRTGADQLSFKGLLLS--SS 226
RN E +SL ++S+ R+C IR L G++LS SS
Sbjct: 219 RRRNMEKLDSLLKKISTQIFQAGGIDRPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSS 278
Query: 227 GIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDV 285
IEP AV LN+ ++ A+ KAEE +L+ LT ++ + +I +L+ I++LD+
Sbjct: 279 RATCYIEPKEAVELNN-MEVRHANSEKAEEMAILSILTSEVSMAQKDILHLLDRILELDI 337
Query: 286 VNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQH 345
ARA+++ G PN+ + T + + ++ + A HPLLL
Sbjct: 338 AFARASHAKWMNGVYPNV---------TSEHTKTPGLGGDHKSLSVDIDSAQHPLLLGS- 387
Query: 346 KQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFI 405
+ G SP++ V PVPIDI +
Sbjct: 388 ----------------------VLG-------------SPNDGMV------FPVPIDIKV 406
Query: 406 ARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQS 465
+ +V+VI+GPNTGGKT LKT+GL +M+KSG+++ + ++PWFD + ADIGD QS
Sbjct: 407 ESRAKVVVISGPNTGGKTALLKTLGLISLMSKSGMYLPAKNCPRLPWFDFILADIGDPQS 466
Query: 466 LSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLL 525
L QSLSTFSGH+ +I I+ ++ SLVLLDEI +GT+P EG AL S+L+ + ++ +
Sbjct: 467 LEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQ-YIKNRVNV 525
Query: 526 TIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGI 585
+ +TH+G+L LK + F+NA MEF L+PT+++LWG G S+A+ +A+ +G
Sbjct: 526 AVVSTHYGDLSRLKDNEPQFQNAAMEFSMETLQPTFRVLWGSTGLSNALTVAKSIGFNTG 585
Query: 586 VVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLML----SRNLHKNLLRTRR 641
+++NA + + E + +ER K + + E R+ L L + H++L+
Sbjct: 586 ILENAHKWTEKLNPEQD-----VER-KGSLFQSLVEERNKLKLQASKTEAFHRDLMNLYH 639
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
+ LEH S K ++ A+ + K + L + S+ + LV + QL + +
Sbjct: 640 E-LEH-ESHDLEKRER-----ALLKKETQKVQEDLNSAKSKMQKLVAEFKSQLEIAQADQ 692
Query: 702 LHCTKVGKNQHV--LTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 759
+ + + V + +D +E P + S P G+ V
Sbjct: 693 YNSLILKTEEAVAEIIEACCPIDLDSIEEPYSDYS-----------------PQAGEKVL 735
Query: 760 VSSFGKK-GTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+ G K GTV++ E ++VQ G ++ +K DI
Sbjct: 736 VTGLGDKLGTVVEEPGDDETVLVQHGKIRVRIKKKDI 772
>gi|123965482|ref|YP_001010563.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9515]
gi|123199848|gb|ABM71456.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9515]
Length = 803
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 217/792 (27%), Positives = 360/792 (45%), Gaps = 164/792 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L ++SFA T +G+ L + I Y+ S RLL ET E++K+
Sbjct: 19 ESIGLLEWDTLKTQIASFASTKMGKNVVLQ--FEIPTEYEISRRLLKETIEINELEKNLD 76
Query: 112 CSLDLTGV-------------------DLSLVKSAIREVRRASPL------RPNEALAVV 146
S+ +GV DL + I R + RP + +
Sbjct: 77 KSISFSGVFDICKNIEICSKGGVINSSDLLEIAETISASRNLKKILLDFEQRPFISAFLK 136
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE------- 199
L+ ++ ++ L+ I+ + + R +Q L L L+ ++ + +
Sbjct: 137 GLIDHNQIEKI-LKNGIESNGRISDR---ASQKLANLRQELLSKKSERRVLVNKFIQNNL 192
Query: 200 -------VSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQAR 248
V +GR L I+ + FKG++ SS G+ I EP S V +++
Sbjct: 193 PYIQDTIVGDRYGRPVLAIKVQYAE-KFKGIIHDSSASGNTIYLEPESIVLKGNKIASME 251
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
A V E +L + ++ + + +M N +++ + R+ YS GG +P +
Sbjct: 252 ARVAGEEFKLLKEWSHIIRDNNQSLLEMSNILLRAEFSLTRSRYSNWIGGNAPIV----- 306
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
+ P+ S + S HPLL+ ++K+K
Sbjct: 307 -----ENSPIVSLMGFS------------HPLLIWENKKK-------------------- 329
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
+ A PV ID I R T+V+ ITGPNTGGKT+ LK
Sbjct: 330 -------------------------QAAKPVSIDFHIDRNTKVVAITGPNTGGKTVALKG 364
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQST 488
+G+A++MA+SGL I S + +P+ ++F DIGD+QSL +LSTFSGH+ +I NI+
Sbjct: 365 LGIALLMARSGLFIPSIQKPIIPFCPNIFVDIGDDQSLEGNLSTFSGHILRIKNILEALN 424
Query: 489 SQ---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
++ S+VLLDEIG+GT+P EGTAL ++LL+ FA S +T+ATTH+G++K LKYS++ F
Sbjct: 425 NKKGFSVVLLDEIGSGTDPSEGTALAIALLKEFAIV-SDITLATTHYGDIKALKYSDNRF 483
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE-INEV 604
EN + FDE KP Y + WG+PGRS+A++I++R+G+ ++ NA E IN +
Sbjct: 484 ENVSVAFDEESFKPKYTLNWGIPGRSNALSISKRIGINEKILNNASNYLKPKEVENINNI 543
Query: 605 I--IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
I +E ER K Q + EA + + LH E F+K+ +A
Sbjct: 544 IKGLEEERLKQQ--KSAEEAAELIARTEILHD----------EIKNKYEFQKL----NAL 587
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
I + K ++ + + + +L+ K Q L ++ + + T + Q+
Sbjct: 588 KIQEAEKQKLSKHIKEAQKEVINLIKKLKDQNATGEDARLIGIRL---KEIETDHLTQSN 644
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
V++ T S S P +GD + + S G +I ++ + V+
Sbjct: 645 VER-----TTSWS----------------PKIGDFIKIKSLNSSGQIIDIDEKAKSYEVK 683
Query: 783 VGNMKWIMKFTD 794
G+ + + D
Sbjct: 684 CGSFRSTLSIND 695
>gi|416124432|ref|ZP_11595428.1| mutS2 protein [Staphylococcus epidermidis FRI909]
gi|319401542|gb|EFV89752.1| mutS2 protein [Staphylococcus epidermidis FRI909]
Length = 782
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 311/628 (49%), Gaps = 121/628 (19%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCA-SQ 650
+ G EIN +I +E Q L+ V + R + L R L+R ++ H A S+
Sbjct: 511 TMIGTDEQEINAMIESLE----QNLKRVDQQR--IELDR-----LVREAQQT--HDALSK 557
Query: 651 RFRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
++++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 558 QYQQYQNYE------KSLMDEAKEKANQRVKSATKEADEILKELRNLRDYKGAEV----- 606
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 --KEHELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 655 EVLEL-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|403046921|ref|ZP_10902390.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
gi|402763617|gb|EJX17710.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
Length = 782
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 307/626 (49%), Gaps = 117/626 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++++ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 TQRIKQNLDKIVKHQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNAR 289
IEP S V +++++ R E +L LT ++ + D I + + G Q+D + A+
Sbjct: 226 IEPSSIVEMSNQISSFRNDEAVERERILTELTVQVAEEADACLISESIMG--QIDFLTAK 283
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y+ S GT P +++R T+YLPKA+HPL
Sbjct: 284 ARYARSIKGTKPEF--------------------TTDR--TVYLPKAFHPL--------- 312
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
L + + + +E A +
Sbjct: 313 ---------------------------------LDRTSVVANTIEFAQDI---------- 329
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
++ITGPNTGGKT+ LKT+GL + MA+SG+ I + + +K+ F++V+ DIGDEQS+ QS
Sbjct: 330 ETVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVYCDIGDEQSIEQS 389
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFS H+K I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +AT
Sbjct: 390 LSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MAT 448
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q
Sbjct: 449 THYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMQVIQK 508
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+ + G EINE+I +E + E E + ++ L + ++
Sbjct: 509 AKSMIGQDEQEINEMIASLEHNSKRVDEQRIELDQLVREAQEARDALAK------QYAQY 562
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
Q + K Q +S+A + A Q SA++ + K + LR +
Sbjct: 563 QNYEK-QLLSEA--------KEKANQRVKSATREADDILKELRDLRDKKGADV------- 606
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+H L +Q D+ E K +KQ+ + ++ + GD V V ++G+KG V
Sbjct: 607 KEHELIDKKKQLE-DQYE---------AKSLKQNVQKQKWDEIKAGDEVKVLTYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ K E VVQ+G +K + D+
Sbjct: 657 LELIGDK-EAVVQMGIIKMKLPLEDL 681
>gi|392971758|ref|ZP_10337151.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
gi|392510297|emb|CCI60439.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
Length = 782
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 307/626 (49%), Gaps = 117/626 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++++ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 TQRIKQNLDKIVKHQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNAR 289
IEP S V +++++ R E +L LT ++ + D I + + G Q+D + A+
Sbjct: 226 IEPSSIVEMSNQISSFRNDEAVERERILTELTVQVAEEADACLISESIMG--QIDFLTAK 283
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y+ S GT P +++R T+YLPKA+HPL
Sbjct: 284 ARYARSIKGTKPEF--------------------TTDR--TVYLPKAFHPL--------- 312
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
L + + + +E A +
Sbjct: 313 ---------------------------------LDRTSVVANTIEFAQDI---------- 329
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
++ITGPNTGGKT+ LKT+GL + MA+SG+ I + + +K+ F++V+ DIGDEQS+ QS
Sbjct: 330 ETVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVYCDIGDEQSIEQS 389
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFS H+K I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +AT
Sbjct: 390 LSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MAT 448
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q
Sbjct: 449 THYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMQVIQK 508
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
A+ + G EINE+I +E + E E + ++ L + ++
Sbjct: 509 AKSMIGQDEQEINEMIASLEHNSKRVDEQRIELDQLVREAQEARDALAK------QYAQY 562
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
Q + K Q +S+A + A Q SA++ + K + LR +
Sbjct: 563 QNYEK-QLLSEAK--------EKANQRVKSATREADDILKELRDLRDKKGADV------- 606
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+H L +Q D+ E K +KQ+ + ++ + GD V V ++G+KG V
Sbjct: 607 KEHELIDKKKQLE-DQYE---------AKSLKQNVQKQKWDEIKAGDEVKVLTYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ K E VVQ+G +K + D+
Sbjct: 657 LELIGDK-EAVVQMGIIKMKLPLEDL 681
>gi|333978122|ref|YP_004516067.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821603|gb|AEG14266.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 785
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 215/397 (54%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I + + LVITGPNTGGKT+ LKTVGL +MA+SGLHI + E +++ FD VFA
Sbjct: 314 VPISIHVGYQFDTLVITGPNTGGKTVTLKTVGLLALMAQSGLHIPAGEGSELGVFDEVFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS HL I I++Q SLVLLDE+GAGT+P EG AL ++LE
Sbjct: 374 DIGDEQSIEQSLSTFSSHLTNIVQILNQVGQGSLVLLDELGAGTDPAEGAALAQAILERL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G+ T+ATTH+ ELK Y+ + ENA +EFD + LKPTY++L G PG S+A IA
Sbjct: 434 HEMGA-KTVATTHYSELKNFAYARERVENASVEFDAITLKPTYRLLIGKPGSSNAFEIAR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V+ AR A ++ +++ ++ER + Q + EAR + L +
Sbjct: 493 RLGLAPDLVERARSFMTAEQVQVADLMQQLERARQQAERELEEARRMRQEAEGLKERYQA 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R ++ R+ ++ A AR LV ++ Q+ + + R+ + A ++R A
Sbjct: 553 LRDELA-------ARRESILARAREEARQLVKRARQESEEAIRELRARLADEAARVREEA 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ + V+ Q P SV +VG V
Sbjct: 606 -----IREAREKLAVMQERLQVGAPRPKPEPGVIPESV----------------SVGQTV 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ F ++GTV+ + P E+ VQVG +K + ++
Sbjct: 645 FLPRFNQRGTVVAL-PEAGEVQVQVGMIKINVPLAEL 680
>gi|78212059|ref|YP_380838.1| MutS2 family protein [Synechococcus sp. CC9605]
gi|78196518|gb|ABB34283.1| MutS2 family protein [Synechococcus sp. CC9605]
Length = 799
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 228/793 (28%), Positives = 352/793 (44%), Gaps = 153/793 (19%)
Query: 48 RVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQ 107
R E+L +LEW ++C +S FA T +GR+A Q + + +S + L ET +
Sbjct: 7 RAQKETLELLEWHRVCDHLSGFASTGMGRDAARVQ--PLPASLDESKQRLAETVEMAVLN 64
Query: 108 KHGSCSLDLTGVD--------------------LSLVKS--AIREVRRA---SPLRPNEA 142
L GV L++ ++ A R +RR LRP
Sbjct: 65 DLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVAETLAAARRLRRQIDDPELRPVCT 124
Query: 143 LAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESL------ 196
+ ++ E L+ L+ A++E + R L + L R E + L
Sbjct: 125 ALIETMVTLPE-LEQRLKFALEEGGRVADRASSALSALRHQWNGL-RQERRDKLQELLRR 182
Query: 197 ---FLEVSSI---HGR--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQ 246
L+ S I HGR L ++ GA G + SS GS I EP S + + ++L +
Sbjct: 183 LAPSLQDSVIAERHGRPVLAVKAGAVS-QVPGQVHDSSASGSTIFVEPRSVLTMGNKLAE 241
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+ + E VL L+ + + + +++ + LD+ AR Y GG P +
Sbjct: 242 LESRIRDEERKVLAELSALVAEEASALNQVVAVLRTLDLALARGRYGRWLGGVEPQL--- 298
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
EP E HPLL+ QHK+
Sbjct: 299 ---------EPAA--------EAPFRFSGLRHPLLVWQHKR------------------- 322
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
+ P VPI + ++ + RV+ ITGPNTGGKT+ L
Sbjct: 323 --------------ADGPPV------------VPISVEVSPELRVVAITGPNTGGKTVTL 356
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS- 485
K++GLA +MA++G+ + S +PW V ADIGDEQSL QSLSTFSGH+K+IG I+
Sbjct: 357 KSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRILEA 416
Query: 486 --QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
+ ++ +LVLLDE+GAGT+P EGTAL +LL+A A+ + LTIATTH GELK LKY +
Sbjct: 417 LQRGSAPALVLLDEVGAGTDPSEGTALATALLKALADR-ARLTIATTHFGELKALKYDDA 475
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AASAEIN 602
FENA + F+ L PTY++LWG+PGRS+A+ IA RLGL V+ A+QL E+N
Sbjct: 476 RFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQLLAPGGDGEVN 535
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
VI +E + + +A L + LH+ LL+ +K + A ++ + Q++
Sbjct: 536 SVIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGRQRLE--- 592
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
Q + + R+L+ + LR + + G+ L + + T
Sbjct: 593 -----------QSIRQGQKEVRTLIRR----LRDERADGETARRAGQRLRSLEDHHRPTP 637
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
+ P P VGD V + + GK V+ + ++ V+
Sbjct: 638 ERRAPKPGWR-------------------PAVGDHVRLLALGKAADVLAITDDGLQLTVR 678
Query: 783 VGNMKWIMKFTDI 795
G M+ + T +
Sbjct: 679 CGVMRTTVDLTAV 691
>gi|37523206|ref|NP_926583.1| recombination and DNA strand exchange inhibitor protein
[Gloeobacter violaceus PCC 7421]
gi|35214209|dbj|BAC91578.1| glr3637 [Gloeobacter violaceus PCC 7421]
Length = 790
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 175/271 (64%), Gaps = 1/271 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + R +VITGPNTGGKT+ LKT+GL V+MA++GL + + + A +PWFD V A
Sbjct: 325 VPVDLPVDPAVRAVVITGPNTGGKTVTLKTLGLVVLMAQAGLFVPARDPAVLPWFDRVLA 384
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFSGH+++I I++ T +LVLLDE+GAGT+P EG AL +LL
Sbjct: 385 DIGDEQSIEQNLSTFSGHIRRIVRILAALTPDALVLLDEVGAGTDPQEGAALARALLVHL 444
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
AE L+ +ATTH+GELK LKY+ FENA +EFD L PTY++LWG+PGRS+A+ IAE
Sbjct: 445 AERAGLV-LATTHYGELKALKYTQSHFENASVEFDLATLSPTYRLLWGIPGRSNALTIAE 503
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL VV A+ E++ VI ++ E V L +LLR
Sbjct: 504 RLGLDAQVVAVAQASLSEGDVELDRVIGALQEQLQIQEEQVRSTTRLRGEVERLQSDLLR 563
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLV 669
+ + A+ R R+ Q++ + A AR+ V
Sbjct: 564 QQVLLDAREAALRARQDQQVREVVAEARAEV 594
>gi|339448753|ref|ZP_08652309.1| MutS2 protein [Lactobacillus fructivorans KCTC 3543]
Length = 785
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 293/594 (49%), Gaps = 108/594 (18%)
Query: 205 GRLCIRTGA-DQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR I + D+ F G++ S+SG+ IEP S V N++L++++ K +L
Sbjct: 194 GRYVIPVKSEDKQKFGGIVHDQSTSGLTLYIEPQSVVSSNNDLRRSQLDERKEIHKILSE 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L++ ++ +E+ + + D++NA+A ++ T P++
Sbjct: 254 LSDMIRPYQEELMENAAQLGHFDLINAKAKFADQMHATKPSV------------------ 295
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
+E + L HPL+ Q +K+ G
Sbjct: 296 ----SKENHVNLKNVRHPLIDQ----------------------KKVVGN---------- 319
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
DI I R ++ITGPNTGGKTI +KT+G+ +MA+SG+
Sbjct: 320 --------------------DIQIGSDFRQIIITGPNTGGKTITIKTLGINQLMAQSGIF 359
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
++++E ++V FD+VFADIGDEQS+ +LSTFS H+ + NI+ T+QSL+L+DE+GAG
Sbjct: 360 VMANEGSQVGVFDNVFADIGDEQSIEANLSTFSSHMDNLINILKHITNQSLILIDELGAG 419
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL MS+L+ ESGS + +ATTH+ ELK Y+ N+ MEFDE LKPTY
Sbjct: 420 TDPKEGAALAMSILDKMGESGSEV-LATTHYPELKVYGYNRPETINSSMEFDEKTLKPTY 478
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
++L GVPG+S+A+NIA+RLGLP ++ A L + S +IN +I ++ + E +
Sbjct: 479 RLLLGVPGQSNALNIAKRLGLPDTIISEASSLMDSDSQDINRMIKQLTKQTKDADERARK 538
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L + LH +L K ++ S ++DA A +V K+ +Q +
Sbjct: 539 LKVELAENERLHADLNDKLTKFTDNKDSM-------VNDAKRQANQIVSKTRRQANEIIN 591
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
V KR Q P L K GK ++ +Q HP ++ V+K K
Sbjct: 592 NLHQ-VQKRTNQ--PIKENELIDAK-GK-----INSLEQ-------HPELKNNRVLKREK 635
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K GD V V S+G++G ++K + K+ VQ+G +K + +D+
Sbjct: 636 AKHHFKE------GDDVLVKSYGQRGVLLK-KMGKDNWEVQLGILKMKVSESDL 682
>gi|414584744|tpg|DAA35315.1| TPA: hypothetical protein ZEAMMB73_219783 [Zea mays]
Length = 901
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/595 (31%), Positives = 284/595 (47%), Gaps = 115/595 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+ LEW +C ++ F T+ GR A + ++ ++S RL+D+T AA+ +
Sbjct: 67 ETESALEWGGVCERLAHFTATAAGRAACEGGRVPVGRSREESERLIDQTAAAVLL----P 122
Query: 112 CSLDLTGVD-------------------LSLVKSAIREVRR--------ASPLRPNEALA 144
LD GV+ L V +IR VR A + +
Sbjct: 123 TPLDFGGVEDVSALVAAAVAGRALAVRELCAVGRSIRAVRAVFHQLKRLADEMPDGRYSS 182
Query: 145 VVALLQ---------------FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIR 189
+V +LQ TL L L A K+ + +ML L+
Sbjct: 183 LVDILQGCDFLTELVQRIEFCLDSTLSLVLDRASKKLEIIRRERRRNIEMLESLL----- 237
Query: 190 NENNESLFLE-------VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAV 238
+ +FL V+ R+C+ A L G++LSSSG G+ +EP AV
Sbjct: 238 KDTAAKIFLAGGIDNPLVTKRRSRMCVGVKASHKHLMPGGIVLSSSGSGATYFMEPQDAV 297
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFG 297
LN+ + + +AEE V+L+L M D +I +++ +++LD+ AR +Y+L
Sbjct: 298 ELNNR-EVKLSGEERAEELVVLSLLTSMIADSQLKIRNLMDNVLELDLACARGSYALWTN 356
Query: 298 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
P + T S +++IY+ HPLLL+Q E
Sbjct: 357 SVRPTF-----------TDSYTISQSDQCNDYSIYIEGIRHPLLLEQSLMA--------E 397
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
+ TE SEM PVP+D+++ + R++VI+GP
Sbjct: 398 ESTTE----------------------ASEM---------PVPLDMWVKKNARIVVISGP 426
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKT +KT+GL+ +M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+
Sbjct: 427 NTGGKTATMKTLGLSSLMSKAGIFFPAKGRPRIPWFDQVLADIGDHQSLEHSLSTFSGHI 486
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
++ I+ + SLVL+DEIG+GT+P EG AL S+L+ A S L I TTH+ +L
Sbjct: 487 SRLRKIVEMVSKDSLVLIDEIGSGTDPAEGVALSTSILKYLA-SRVNLAIVTTHYADLSR 545
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
L+ ++ FENA MEF L+PTY+ILWG G S+A++IA+ +G V+ A++
Sbjct: 546 LQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQE 600
>gi|418329211|ref|ZP_12940290.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418631982|ref|ZP_13194426.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|420192813|ref|ZP_14698670.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
gi|365230873|gb|EHM71948.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374833651|gb|EHR97326.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|394260629|gb|EJE05438.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
Length = 782
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 301/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K + LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|420177446|ref|ZP_14683782.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|420180254|ref|ZP_14686509.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
gi|394247830|gb|EJD93072.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|394251293|gb|EJD96392.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
Length = 782
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 301/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K + LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|373494347|ref|ZP_09584952.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
gi|371968844|gb|EHO86298.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
Length = 796
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 223/404 (55%), Gaps = 27/404 (6%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
+E VP+DI I R L+ITGPNTGGKT+ LKT GL VMMA+SGLHI +S + +P
Sbjct: 310 IEYKKAVPVDIRIGGDYRTLIITGPNTGGKTVSLKTAGLLVMMAQSGLHIPASHASTLPV 369
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F VFADIGDEQS+ QSLSTFS H+K I ++I +++ SLVL+DE+GAGT+P EG AL +
Sbjct: 370 FGDVFADIGDEQSIEQSLSTFSSHMKNIVSVIDKASYDSLVLVDELGAGTDPTEGAALAI 429
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
++LE F +SG+ LT+ATTH+ ELK + ENA MEFD L PTY++L GVPG+S+
Sbjct: 430 AILERFYDSGA-LTMATTHYNELKKYALATSGVENAAMEFDVETLTPTYRLLIGVPGKSN 488
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+++LGL V++ A + E VI +E K + +A
Sbjct: 489 AFEISKKLGLSESVIERASEHIKHGDMEFENVISSIEDDKRKAAADRLDAEEM------- 541
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
++ + R + LE K + IS+ A + + A++L A V K +
Sbjct: 542 -RDEIEERLRKLEE-------KEKAISEKRADIIAEAKREARELLRETKSAVKDVQKDLR 593
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+L+ S +++ G N L + ++ E S VVK + P T
Sbjct: 594 KLQKSGART-----NGFNTGALEKSRRKLN----EAENLVSEKVVKQVNSEPVSADT--I 642
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+GD V + + G+ GT++ + K ++V +G +K + D++
Sbjct: 643 KIGDRVKLLTLGQNGTILSLPDEKGNLMVNIGVLKVKARLEDLM 686
>gi|89098890|ref|ZP_01171770.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
gi|89086294|gb|EAR65415.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
Length = 784
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 217/785 (27%), Positives = 375/785 (47%), Gaps = 152/785 (19%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGSC 112
L+VLE++K+ + +SLGR L S + Y++ +RL +ET+ A+++ + G+
Sbjct: 6 LKVLEFNKVREQLLEHVSSSLGRSKAEVLLPSAD--YEEVVRLQEETDEAVKVLRIKGNI 63
Query: 113 SLD-----------------LTGVDLSLVKSAI---REVRRASPLRPNEALAVVALLQFS 152
L L+ +L + S + R+++R NE + L ++
Sbjct: 64 PLGGIFDIRPHVKRSVIGGMLSPQELVQIASTVHASRQLKRFVDDFSNEESELPILTEYM 123
Query: 153 E------TLQLSLRAAIKEDADLY---------IRFMPLTQ--MLYQLMDMLIRNENNES 195
+ L+ ++R AI E+ ++ IR T+ + + ++ +IR+ N
Sbjct: 124 DRVIVLAELEEAIRMAIDENGEMLDSASDALRSIRTQLRTRESRVRERLESMIRSSNAAK 183
Query: 196 LFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARAS 250
+ + ++ + R I + G ++ SSSG IEP + V LN+ELQ R
Sbjct: 184 MLSDAIITIRNDRFVIPVKQEYRGHYGGIIHDQSSSGQTLFIEPQAIVQLNNELQSIRVK 243
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ E +L+ L+ + E++ ++ + ++D + A+ YS + P +
Sbjct: 244 EQQEIERILVELSGRAAAYQPELDMIVEVLAEVDFMFAKGRYSRRLKASKPEV------- 296
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYG 370
++ER ++ KA HPL
Sbjct: 297 -------------NNERRINLF--KARHPL------------------------------ 311
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
L++ V DI + R +VITGPNTGGKT+ LKTVG
Sbjct: 312 ----------------------LQIDEAVANDISLGRDYTTIVITGPNTGGKTVTLKTVG 349
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
L +MA++GL I + + ++V F +V+ADIGDEQS+ QSLSTFS H+ I +I++++ +
Sbjct: 350 LCTLMAQAGLQIPALDGSEVSVFGAVYADIGDEQSIEQSLSTFSSHMVNIVDILAKADFE 409
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVL DE+GAGT+P EG AL +S+L+ + GS + IATTH+ ELK Y+ + NA +
Sbjct: 410 SLVLFDELGAGTDPQEGAALAISILDEVYKRGSRV-IATTHYPELKAYGYNREGVINASV 468
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EFD L PTYK+L GVPGRS+A I+ RLGL V+++AR S++I +I +E
Sbjct: 469 EFDIETLSPTYKLLIGVPGRSNAFEISRRLGLDNSVIESARSHVSEDSSQIENMIASLED 528
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVH 670
+ Q + + EA L + LHK++ +++++E+ +K + AAA A +V
Sbjct: 529 SRRQAEKELEEAHELLRGADMLHKDM---QKQMMEYYE----QKDEMQEKAAAKAADIVE 581
Query: 671 KSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA 730
K + ++A ++ + L ++ K+ V + +D +
Sbjct: 582 K-------AKAEAEEII------------RDLRKMRIEKHAEVK----EHELIDARKKLE 618
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
A+ V K K++ + + + GD V V +FG+KG +++ S++E VQ+G +K +
Sbjct: 619 DAAPKVSKSKKEARKSDKHDFA-AGDEVKVLTFGQKGHLLE-RASEDEWQVQIGILKMKV 676
Query: 791 KFTDI 795
K D+
Sbjct: 677 KERDL 681
>gi|420198949|ref|ZP_14704633.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
gi|394272635|gb|EJE17085.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
Length = 782
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 301/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K + LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|227510203|ref|ZP_03940252.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190408|gb|EEI70475.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 283/598 (47%), Gaps = 121/598 (20%)
Query: 207 LCIRTGADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTE 264
L IR Q F G++ S+SG +EP + V +N++L++ + + E +L LT+
Sbjct: 199 LPIRADYKQ-HFGGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEERRILAELTD 257
Query: 265 KMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSS 324
++ E+ +N + QLD VNA+A ++ G P I
Sbjct: 258 LIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIGAVQPEI--------------------- 296
Query: 325 SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLS 384
RE + L +A HPL+ +D AN
Sbjct: 297 -SRENVVNLRRARHPLI-----------ARDKAVAN------------------------ 320
Query: 385 PSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
DI I R ++ITGPNTGGKTI LKTVGL +M +SGL I +
Sbjct: 321 -----------------DIQIGDGYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITA 363
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+E +++ FD VFADIGD+QS+ +LSTFS H+ I +I++ +SQSL+LLDE+GAGT+P
Sbjct: 364 NEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDP 423
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++++A +SG L IATTH+ ELK Y+ NA MEFD L+PTY+ L
Sbjct: 424 KEGAALAMAIIDAIHQSGCEL-IATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFL 482
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
G+PG+S+A+NIA +LGL +++ AR + + +IN +I E+ + + +
Sbjct: 483 MGIPGQSNALNIASKLGLSKEIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDE 542
Query: 625 FLMLSRNLHKNLLRT-------RRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
L S LH +L + +LE Q + V+K +A + +HK QQ+
Sbjct: 543 QLTDSTKLHDDLQNQFTQYQNQKDHLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG 602
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
SA + L+ + R + +L KV + + +F HP
Sbjct: 603 QSAIKENELIDAKGALNRLEVTPNLKKNKVLRKEKA-KHDF---------HP-------- 644
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S+G++GT+I+ E + VQ+G +K + D+
Sbjct: 645 -----------------GDEVLVKSYGQQGTLIRQEKNG-AWEVQLGILKMQIDENDL 684
>gi|418411583|ref|ZP_12984850.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
gi|420167521|ref|ZP_14674174.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|394238147|gb|EJD83630.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|410892309|gb|EKS40103.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
Length = 782
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + D D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSADSDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|418634564|ref|ZP_13196957.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
gi|374836787|gb|EHS00364.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
Length = 782
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 300/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ + S
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETS-- 568
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ D A + A Q SA++ + K + LR + +
Sbjct: 569 ------LMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|420189663|ref|ZP_14695631.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|420204084|ref|ZP_14709644.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
gi|394260998|gb|EJE05800.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|394274098|gb|EJE18523.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
Length = 782
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 300/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ + S
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETS-- 568
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ D A + A Q SA++ + K + LR + +
Sbjct: 569 ------LMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|377556922|ref|ZP_09786596.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
gi|376166998|gb|EHS85865.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
Length = 789
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 286/573 (49%), Gaps = 106/573 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP S V LN+ L+QA+ + VL+ L++ ++ DEI + + L
Sbjct: 216 SASGQTLYIEPGSVVELNNRLRQAQIEEVQEMRRVLIELSDLIRPYQDEIAQNEAILGHL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D++NA+A L MK SL P+ + + + L +A HPL+ Q
Sbjct: 276 DLINAKAK-------------LAAQMKASL---PIVND------QLVVNLRQARHPLIPQ 313
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
D AN DI
Sbjct: 314 -----------DQVVAN-----------------------------------------DI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ + + LVITGPNTGGKTI LKT+G+ +MA+SG+ I ++E ++V FD+VFADIGDE
Sbjct: 322 QLGKDYQALVITGPNTGGKTITLKTLGIIQLMAQSGMFIPANENSQVTVFDNVFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QSL Q+LSTFSGH++ + I+ Q T SL+LLDE+GAGT+P EG AL M++L+A G+
Sbjct: 382 QSLEQNLSTFSGHMENVKTILEQMTDHSLILLDELGAGTDPKEGAALAMAILDAIGTCGA 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL- 582
+ + TTH+ ELK Y NA MEFD+ L+PTY++L G+PG+S+ I IA RLGL
Sbjct: 442 RVMV-TTHYPELKVYAYDRQATINASMEFDQATLQPTYRLLIGIPGQSNGIAIANRLGLD 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
PGI +Q A+ L A S ++N++I ++ + Q E AR + N K T++
Sbjct: 501 PGI-IQTAQSLVQADSQDLNQMIGDLVEQRKQARE--ENARLVELREANEAKEAELTQK- 556
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
L QR R + ARS K+ ++ + QA ++H LR Q
Sbjct: 557 -LTRFDEQRDRLYDE-------ARS---KANHEVAQAKKQADKIIH----HLRQLQVQQG 601
Query: 703 HCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSS 762
K +H L + Q ++P A +SV++ R K + GD V V S
Sbjct: 602 ANVK----EHELINAKGQLNALHQDNPRLAHNSVLR------RAKAKQALKPGDTVQVKS 651
Query: 763 FGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+G++GT++ + + + VQ+G +K + D+
Sbjct: 652 YGQQGTLV-AKRGRHQWEVQLGILKMAIDEADL 683
>gi|57866654|ref|YP_188310.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis RP62A]
gi|242242444|ref|ZP_04796889.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|418612985|ref|ZP_13176006.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|418626824|ref|ZP_13189420.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|420175070|ref|ZP_14681515.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|420234319|ref|ZP_14738884.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
gi|81674957|sp|Q5HQ30.1|MUTS2_STAEQ RecName: Full=MutS2 protein
gi|57637312|gb|AAW54100.1| MutS2 family protein [Staphylococcus epidermidis RP62A]
gi|242234094|gb|EES36406.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|374817295|gb|EHR81480.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|374831368|gb|EHR95110.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|394244356|gb|EJD89701.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|394304373|gb|EJE47778.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
Length = 782
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 300/624 (48%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ + S
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETS-- 568
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ D A + A Q SA++ + K + LR + +
Sbjct: 569 ------LMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGIIKMKLPIEDL 681
>gi|417645954|ref|ZP_12295839.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
gi|329729966|gb|EGG66357.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
Length = 782
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 300/627 (47%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEHRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + E TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEERTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT I
Sbjct: 314 -DKDTVVANT-----------------------------------------IEFIDDVET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|27467755|ref|NP_764392.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis ATCC 12228]
gi|293366874|ref|ZP_06613550.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656654|ref|ZP_12306337.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|417660105|ref|ZP_12309696.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|417909781|ref|ZP_12553514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|418603410|ref|ZP_13166795.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|418606840|ref|ZP_13170105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|418609778|ref|ZP_13172912.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|418628985|ref|ZP_13191501.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|418663768|ref|ZP_13225276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|419772619|ref|ZP_14298650.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|420202124|ref|ZP_14707719.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|420206519|ref|ZP_14712029.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|420210956|ref|ZP_14716345.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|420219527|ref|ZP_14724543.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|420222048|ref|ZP_14726973.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|420224910|ref|ZP_14729748.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|420229273|ref|ZP_14733979.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|420231637|ref|ZP_14736282.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
gi|38604826|sp|Q8CPL6.1|MUTS2_STAES RecName: Full=MutS2 protein
gi|27315299|gb|AAO04434.1|AE016746_224 MutS-like protein [Staphylococcus epidermidis ATCC 12228]
gi|291319175|gb|EFE59545.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329734429|gb|EGG70742.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|329736315|gb|EGG72587.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|341652390|gb|EGS76178.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|374406114|gb|EHQ77017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|374406846|gb|EHQ77724.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|374407579|gb|EHQ78432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|374411187|gb|EHQ81905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|374834979|gb|EHR98610.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|383359246|gb|EID36676.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|394270097|gb|EJE14620.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|394278358|gb|EJE22675.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|394282893|gb|EJE27075.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|394288952|gb|EJE32849.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|394290079|gb|EJE33949.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|394294313|gb|EJE37999.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|394299039|gb|EJE42590.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|394302179|gb|EJE45627.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
Length = 782
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + E TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEERTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|260434383|ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109]
gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Length = 799
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 229/785 (29%), Positives = 352/785 (44%), Gaps = 153/785 (19%)
Query: 48 RVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET--NAAIE 105
R E+L +LEW ++C +S FA T +GR+A Q + + ++S + L ET A ++
Sbjct: 7 RAQQETLELLEWHRVCDHLSGFASTGMGRDAARVQ--PLPASLEESKQRLAETVEMAVLD 64
Query: 106 MQKHGSCSL----DLTGVDLSLVK----------------SAIREVRRAS---PLRPNEA 142
G S +L V L K +A R +RR + LRP
Sbjct: 65 DLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVAETLAAARRLRRQTDDPELRPVCT 124
Query: 143 LAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESL------ 196
+ ++ E L+ L+ A++E + R L + L R E + L
Sbjct: 125 ALIETMVTLPE-LEQRLKFALEEGGRVADRASSALSALRHQWNGL-RQERRDKLQELLRR 182
Query: 197 ---FLEVSSI---HGR--LCIRTGADQLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQ 246
L+ S I HGR L ++ GA G + SS GS +EP S + + ++L +
Sbjct: 183 LAPSLQDSVIAERHGRPVLAVKAGAVS-QVPGQVHDSSASGSTLFVEPRSVLTMGNKLVE 241
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+ + E VL L+ + + + +++ + LD+ AR Y GG P +
Sbjct: 242 LESRIRDEERKVLAELSALVAEEASVLNQVVAVLRALDLALARGRYGRWLGGVEPQL--- 298
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
+ E HPLL+ QHK+
Sbjct: 299 -----------------EAASEAPFRFSGLRHPLLVWQHKR------------------- 322
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
+ P VPI + ++ + RV+ ITGPNTGGKT+ L
Sbjct: 323 --------------ADGPPV------------VPISLEVSPELRVVAITGPNTGGKTVTL 356
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS- 485
K++GLA +MA++G+ + S +PW V ADIGDEQSL QSLSTFSGH+K+IG I+
Sbjct: 357 KSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRILEA 416
Query: 486 --QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
+ S +LVLLDE+GAGT+P EGTAL +LL+A A+ + LTIATTH GELK LKY +
Sbjct: 417 LHRGGSPALVLLDEVGAGTDPSEGTALATALLKALADR-ARLTIATTHFGELKALKYDDA 475
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AASAEIN 602
FENA + F+ L PTY++LWG+PGRS+A+ IA RLGL V+ A+QL E+N
Sbjct: 476 RFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQLLAPGGDGEVN 535
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
VI +E + + +A L + LH+ LL+ +K + A ++ + Q++
Sbjct: 536 SVIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGRQRLE--- 592
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
Q + + R+L+ + LR + K G+ L + + T
Sbjct: 593 -----------QSIRQGQKEVRTLIRR----LRDERADGETARKAGQRLRSLEDHHRPTP 637
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
+ P P+VGD V + + GK V+ + ++ V+
Sbjct: 638 ERRAPKPGWR-------------------PSVGDRVRLLALGKAADVLAITDDGLQLTVR 678
Query: 783 VGNMK 787
G M+
Sbjct: 679 CGVMR 683
>gi|419768706|ref|ZP_14294822.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
gi|383359532|gb|EID36955.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
Length = 694
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 300/627 (47%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + E TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEERTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT I
Sbjct: 314 -DKDTVVANT-----------------------------------------IEFIDDVET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|418324592|ref|ZP_12935826.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
gi|365225279|gb|EHM66524.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
Length = 783
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 306/622 (49%), Gaps = 123/622 (19%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
+Q + Q +D ++++++N+ + V+ + R I A+ + F G++ SSSG
Sbjct: 167 SQRIRQNLDRIVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSSSGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNAR 289
IEP S V +N+++ + R E +L LT ++ D D I + + G Q+D + A+
Sbjct: 227 IEPSSVVEMNNQISRLRNDEAVERERILTELTAEVAADADGCLIAEQIMG--QIDFLTAK 284
Query: 290 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 349
A Y+ T P + ++YLPKA+HPLL Q
Sbjct: 285 ARYARKIKATKPEFT----------------------EDRSVYLPKAFHPLLDQ------ 316
Query: 350 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 409
+ ANT I A
Sbjct: 317 -----ETVVANT-----------------------------------------IEFAEDV 330
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
++ITGPNTGGKT+ LKT+GL ++MA++GL I + + +K+ F++V+ DIGDEQS+ QS
Sbjct: 331 ETVIITGPNTGGKTVTLKTLGLIIIMAQAGLLIPTLDGSKLGIFENVYCDIGDEQSIEQS 390
Query: 470 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 529
LSTFS H+K I +I+ ++T SL+L DE+GAGT+P EG AL MS+L+ + GSL+ +AT
Sbjct: 391 LSTFSSHMKNIVSILEEATQNSLILFDELGAGTDPSEGAALAMSILDYVHDIGSLV-MAT 449
Query: 530 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 589
TH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++
Sbjct: 450 THYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGMKIISK 509
Query: 590 ARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKIL---EH 646
A+ + G EIN +I +E+ + E E L +++ H +L + +K +H
Sbjct: 510 AKTMIGHDEQEINNMIESLEKNSKRVDEQRIELDRLLREAQDTHDDLEQHYKKFKNYEQH 569
Query: 647 CASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTK 706
++ K + AA K A Q+ + L H R ++ L
Sbjct: 570 LMNEARDKANQRVKAAT-------KEADQIL------KDLRHMRDKKGADVKEHEL---- 612
Query: 707 VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKK 766
+ K +H L +++ S+ KD+K+ ++ + + GD V V ++G+K
Sbjct: 613 IDKKKH-LEDQYEE-------------KSLKKDVKK----QKWDEIHAGDEVKVLTYGQK 654
Query: 767 GTVIKVEPSKEEIVVQVGNMKW 788
G V+++ +E VVQ+G +K
Sbjct: 655 GEVLEL-VGDDEAVVQMGIIKM 675
>gi|435854741|ref|YP_007316060.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
gi|433671152|gb|AGB41967.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
Length = 788
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 284/589 (48%), Gaps = 115/589 (19%)
Query: 212 GADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVD 269
A Q F G++ S+SG IEP+ V +N++LQQ R+ + + +L L+ +++
Sbjct: 203 AAKQSDFPGIIHDKSASGQTVFIEPMPVVEINNKLQQLRSEEEEEIKRILQELSIEVEKR 262
Query: 270 LDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREW 329
L I++ + + LD + A+A YS+ + P + SK
Sbjct: 263 LQPIKETIKVLAVLDFIFAKAKYSIELEASEP---------------ILNSK-------G 300
Query: 330 TIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQ 389
I L KA HPLL + ++ P ++Q
Sbjct: 301 QINLIKARHPLLTE--------------------------------------DVVPIDVQ 322
Query: 390 VSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAK 449
+ D F + LVITGPNTGGKT+ LKT+GL +M ++GLH+ + +K
Sbjct: 323 LG----------DNFAS-----LVITGPNTGGKTVSLKTIGLLTIMGQAGLHVPALSGSK 367
Query: 450 VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTA 509
+ F+ V+ADIGDEQS+ Q+LSTFS H+ QI I+ +++ SLVLLDE+GAGT+P+EG+A
Sbjct: 368 LAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASINSLVLLDELGAGTDPVEGSA 427
Query: 510 LGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPG 569
L +L+ + G+ T+ATTH+ ELKT Y+ D ENA +EFD L PTY + G+PG
Sbjct: 428 LARGILDYLHQQGA-KTVATTHYSELKTYAYNQDGVENASVEFDVETLAPTYNLQMGLPG 486
Query: 570 RSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLS 629
RS+A IA RLGL ++ A Q E++ +I ++E K ++ + A+ +
Sbjct: 487 RSNAFQIASRLGLSDEIIDKASQFLDQEDIELDNIIKQIEEDKREYQQKKESAQENKRQA 546
Query: 630 RNLHKNLLRTRRKI---LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
R L + +K+ E + +R+ KI I R+ + A ++ + R L
Sbjct: 547 RELREEYEAKLKKLEAQKEREMKEAYREANKI-----IKRA--QQKANKIIDELKEQRQL 599
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
++ + R + K + Q ++ + +Q K+ P +
Sbjct: 600 NDRKIEGARSELREERKDLK-EERQELIEAKREQ--------------------KEVPDI 638
Query: 747 KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K VGD V +S+ +KG V+++ KEE +VQ G MK + ++
Sbjct: 639 K------VGDKVKLSNLNQKGKVLEIHSGKEEALVQAGIMKVTVDLREL 681
>gi|289551051|ref|YP_003471955.1| recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|385784672|ref|YP_005760845.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|418414347|ref|ZP_12987562.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180583|gb|ADC87828.1| Recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|339894928|emb|CCB54231.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|410876954|gb|EKS24851.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 783
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 298/624 (47%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++N++N+ + V+ + R I A+ + FKG++ S+SG
Sbjct: 167 TQRIRQNLDRIVKNQSNQKKLSDAIVTVRNERNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + ++ + LD + A+A
Sbjct: 227 IEPSSIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + TIYLP A+HPLL
Sbjct: 287 YASAIKGTKPTFY----------------------EARTIYLPNAFHPLL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
K+ ANT +E A V
Sbjct: 315 -DKETVVANT-------------------------------IEFADDV----------ET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F VF DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFHDVFCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ Q+ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 393 TFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMSILDYTRALGALV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLNLSIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E H L ++ H +L + ++ Q
Sbjct: 512 TMIGTDEQEINLMIESLEKNAKRVDTQRIELDHLLKEAQQTHDDLEK------QYNQFQA 565
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K Q I DA A Q +A++ + K + LR + ++ +
Sbjct: 566 YEK-QLIEDAK--------DKANQRVKAATKEADEILKELRTLRDQKGADVKEHELIDKK 616
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L + ++ K IKQ + ++ + GD V V S+G+KG V++
Sbjct: 617 KQLDNQYE-----------------AKSIKQQVQKQKYDKIVAGDEVKVLSYGQKGEVLE 659
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ +E VVQ+G +K + D+
Sbjct: 660 L-VGNDEAVVQMGIIKMKLPIEDL 682
>gi|315658547|ref|ZP_07911419.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
gi|315496876|gb|EFU85199.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
Length = 783
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 298/624 (47%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++N++N+ + V+ + R I A+ + FKG++ S+SG
Sbjct: 167 TQRIRQNLDRIVKNQSNQKKLSDAIVTVRNERNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + ++ + LD + A+A
Sbjct: 227 IEPSSIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + TIYLP A+HPLL
Sbjct: 287 YASAIKGTKPTFY----------------------EARTIYLPNAFHPLL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
K+ ANT +E A V
Sbjct: 315 -DKETVVANT-------------------------------IEFADDV----------ET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F VF DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFHDVFCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ Q+ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 393 TFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMSILDYTRALGALV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLNLSIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E H L ++ H +L + ++ Q
Sbjct: 512 TMIGTDEQEINLMIESLEKNAKRVDTQRIELDHLLKEAQQTHDDLEK------QYNQFQA 565
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K Q I DA A Q +A++ + K + LR + ++ +
Sbjct: 566 YEK-QLIEDAK--------DKANQRVKAATKEADEILKELRTLRDQKGADVKEHELIDKK 616
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L + ++ K IKQ + ++ + GD V V S+G+KG V++
Sbjct: 617 KQLDNQYE-----------------AKSIKQQVQKQKYDKIVAGDEVKVLSYGQKGEVLE 659
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ +E VVQ+G +K + D+
Sbjct: 660 L-VGNDEAVVQMGIIKMKLPIEDL 682
>gi|317059473|ref|ZP_07923958.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
gi|313685149|gb|EFS21984.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
Length = 778
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 199/687 (28%), Positives = 322/687 (46%), Gaps = 128/687 (18%)
Query: 120 DLSLVKSAIREVRRASPLRPNEAL---AVVALLQFSETLQLSLRAAIKEDADLYIRFMPL 176
DL K+ +++ SPLR E L A+ A Q + L LR D+ I L
Sbjct: 109 DLGKYKALRDYMKQVSPLRLIEDLISKAIDAEKQIKDDASLDLR-------DIRIHKKVL 161
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLL------LSSSGI 228
Q + + D L + + F E ++ GR+ + +L FKGL+ SSSG
Sbjct: 162 AQNIRRKFDELFEEPSVSAAFQERIITERDGRMVVPV---KLDFKGLIKGIEHDRSSSGQ 218
Query: 229 GSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNA 288
IEPLS V LN+++++ + +LL L+E+++ DEI K+ N I+ +D + A
Sbjct: 219 TVFIEPLSIVSLNNKMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQA 278
Query: 289 RATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQK 348
+A + L H P+ V E +YL KA HP +
Sbjct: 279 KANFGLE----------------EACHVPM---VQGKE---ILYLEKARHPFI------- 309
Query: 349 TQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARK 408
P E VP+ I +
Sbjct: 310 ------------------------------------PKE---------KVVPLTFEIGKD 324
Query: 409 TRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQ 468
++L+ITGPNTGGKT+ LKT GL +MA SG+ I +S+ +++ +F VFADIGDEQS+ Q
Sbjct: 325 YKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQGVFADIGDEQSIEQ 384
Query: 469 SLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIA 528
SLS+FS H+ + +I+ Q LVLLDE+G+GT+P EG+A MS+++ E +I
Sbjct: 385 SLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSIIDYLKEK-KCNSII 443
Query: 529 TTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQ 588
TTH+ E+K Y+ + E A MEFD L PTY++L G+PG S+A+ IA+RLG+P +++
Sbjct: 444 TTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTIAKRLGIPQEIIE 503
Query: 589 NARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCA 648
A+ + +I E++I + K++ L+ + L + +++ RK LE
Sbjct: 504 KAQSYISEDNKKI-ELMINNIKNKSESLDKMQAELTGLREAAKMNQEKWEEERKALEREK 562
Query: 649 SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
++ +K S + + ++A +L+ K Q+ S Q+ ++
Sbjct: 563 NEILKKA-------------YEDSEKMMNEMRAKASALIEK-IQKEEHSKEQA---KQIQ 605
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
KN ++L+S ++ + ++ K +K+ K GD V V + + T
Sbjct: 606 KNLNMLSSALKE--------EKNKTITLNKTMKKKAHFKE------GDRVFVKNINQFAT 651
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+K+ KE VQ G +K + F +I
Sbjct: 652 VLKINAMKESAQVQAGILKLEVPFEEI 678
>gi|338814182|ref|ZP_08626216.1| MutS2 family protein [Acetonema longum DSM 6540]
gi|337273787|gb|EGO62390.1| MutS2 family protein [Acetonema longum DSM 6540]
Length = 786
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 231/444 (52%), Gaps = 80/444 (18%)
Query: 178 QMLYQLMDMLIRNENNESLFLEV-SSIHG-RLCIRTGADQL-SFKGLL--LSSSGIGSVI 232
Q + + +D ++ + + F +V ++ G R CI + F G++ S+SG I
Sbjct: 163 QRIREKVDSILHSSEYQKYFQDVLVTVRGDRYCIPVKQEHRHQFPGIIHDQSASGATVFI 222
Query: 233 EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATY 292
EP++ V LN++L+QA A+ E +L L+ ++ + + + +D A+A
Sbjct: 223 EPMAVVQLNNDLKQAMAAEKNEIERILTLLSLQVAKSASLLTQSCETMAHIDFAFAKARL 282
Query: 293 SLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQA 352
+L D+K HEP+ ++ E L +A HPL+
Sbjct: 283 AL-------------DLK---AHEPLFNQTGQVE------LRQARHPLI----------- 309
Query: 353 WKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVL 412
PSE VPID+ I +L
Sbjct: 310 --------------------------------PSE---------DVVPIDVRIGNDFHIL 328
Query: 413 VITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLST 472
VITGPNTGGKT+ LKTVG+ +MA++GL I ++ ++ F ++FADIGDEQS+ QSLST
Sbjct: 329 VITGPNTGGKTVALKTVGIFALMAQAGLFIPAANECQLTVFHNIFADIGDEQSIEQSLST 388
Query: 473 FSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHH 532
FS H+ + I++Q T + LVLLDEIG GT+P EG AL M++LE G+ TIATTH+
Sbjct: 389 FSAHMTNLVRILNQVTGKDLVLLDEIGIGTDPDEGAALAMAILEYLHSIGA-RTIATTHY 447
Query: 533 GELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
ELKT YS ENAC+EFD+ L+PTY++L GVPG S+A I++RLGLP ++ ARQ
Sbjct: 448 SELKTFAYSRSGIENACVEFDQQTLRPTYRLLIGVPGSSNAFQISKRLGLPVKIIDRARQ 507
Query: 593 LYGAASAEINEVIIEMERFKTQFL 616
L E+ V+ +E KT ++
Sbjct: 508 LLDKGHVEMESVLSSLEEEKTSYI 531
>gi|242074804|ref|XP_002447338.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
gi|241938521|gb|EES11666.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
Length = 912
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 225/806 (27%), Positives = 354/806 (43%), Gaps = 152/806 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
E+ LEW +C ++ FA T+ GR A + + ++ ++S R +D+T AA+ +
Sbjct: 69 ETESALEWGGVCERLAHFASTAAGRAACEGRRVPVGRSREESERFIDQTAAAVLL----P 124
Query: 112 CSLDLTGVD-------------------LSLVKSAIREVRR--------ASPLRPNEALA 144
LD GV+ L V +IR VR A + +
Sbjct: 125 TPLDFGGVEDVSALVAAAASGRALAVRELCAVGRSIRAVRAVFDQLKRLADEMPDGRYSS 184
Query: 145 VVALLQ---------------FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIR 189
+V +LQ TL L L A K+ + +ML L+
Sbjct: 185 LVDILQGCDFLTELVQRIEFCLDSTLSLVLDRASKKLEIIRRERRRNIEMLESLL----- 239
Query: 190 NENNESLFLE-------VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAV 238
+ +F V+ R+C+ A L G++LSSSG G+ +EP AV
Sbjct: 240 KDTAAKIFQAGGIDSPLVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFVEPRDAV 299
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFG 297
LN+ + + +AEE +L+L M D +I +++ +++LD+ AR +Y+
Sbjct: 300 ELNNR-EVKLSGDERAEELAILSLLTSMIADSQLKIRNLMDKVLELDLACARGSYARWTN 358
Query: 298 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 357
G P + T S ++++Y+ HPLLL+Q
Sbjct: 359 GVKPTF-----------SDSYTISQSDQCTDYSVYIEGIRHPLLLEQ------------- 394
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
+L E A E+ PVP+D+++ + R++VI+GP
Sbjct: 395 ------------------------SLMAEESTTRASEM--PVPLDMWVKKHARIVVISGP 428
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKT +KT+GL+ +M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+
Sbjct: 429 NTGGKTATMKTLGLSSLMSKAGMFFPAKGSPRIPWFDQVLADIGDHQSLEHSLSTFSGHI 488
Query: 478 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 537
++ I+ + SLVL+DEIG+GT+P EG AL S+L+ A S L I TTH+ +L
Sbjct: 489 SRLRKIVEIVSKDSLVLIDEIGSGTDPSEGVALSTSILKYLA-SKVNLAIVTTHYADLSR 547
Query: 538 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ----L 593
L+ ++ FENA MEF L+PTY+ILWG G S+A++IA+ +G V+ A++ L
Sbjct: 548 LQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVEKL 607
Query: 594 YGAASAEINEVIIEMERFKTQFLE-HVHEARHFLMLSRNLHKNLLRTRRKILE-HCASQR 651
E ++ + + + LE +EA L L+ N +R LE A R
Sbjct: 608 LPDKQKERQGLLYDSLLDEKKLLESQANEAASVLSQVEGLY-NEIRLEADDLESRVAGLR 666
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
R+ QK+ Q+L SQ +++ QL+ S + +
Sbjct: 667 ARETQKVQ--------------QELKVVKSQMDTIIKNFEAQLKNSKLEQYNS------- 705
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKK--GTV 769
L + T V + D QS V P +GD V++ G TV
Sbjct: 706 --LMRKAEAATASVVAAHQPNEITFDDDENQSSFV-----PQIGDKVYIQGLGGGTMATV 758
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
++ E +VQ G +K +K I
Sbjct: 759 VETFGEDESCMVQYGKIKVRVKRNKI 784
>gi|315917841|ref|ZP_07914081.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
gi|313691716|gb|EFS28551.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
Length = 778
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 199/687 (28%), Positives = 322/687 (46%), Gaps = 128/687 (18%)
Query: 120 DLSLVKSAIREVRRASPLRPNEAL---AVVALLQFSETLQLSLRAAIKEDADLYIRFMPL 176
DL K+ +++ SPLR E L A+ A Q + L LR D+ I L
Sbjct: 109 DLGKYKALRDYMKQVSPLRLIEDLISKAIDAEKQIKDDASLDLR-------DIRIHKKVL 161
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLL------LSSSGI 228
Q + + D L + + F E ++ GR+ + +L FKGL+ SSSG
Sbjct: 162 AQNIRRKFDELFEEPSVSAAFQERIITERDGRMVVPV---KLDFKGLIKGIEHDRSSSGQ 218
Query: 229 GSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNA 288
IEPLS V LN+++++ + +LL L+E+++ DEI K+ N I+ +D + A
Sbjct: 219 TVFIEPLSIVSLNNKMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQA 278
Query: 289 RATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQK 348
+A + L H P+ V E +YL KA HP +
Sbjct: 279 KANFGLE----------------EACHVPM---VQGKE---ILYLEKARHPFI------- 309
Query: 349 TQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARK 408
P E VP+ I +
Sbjct: 310 ------------------------------------PKE---------KVVPLTFEIGKD 324
Query: 409 TRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQ 468
++L+ITGPNTGGKT+ LKT GL +MA SG+ I +S+ +++ +F VFADIGDEQS+ Q
Sbjct: 325 YKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQGVFADIGDEQSIEQ 384
Query: 469 SLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIA 528
SLS+FS H+ + +I+ Q LVLLDE+G+GT+P EG+A MS+++ E +I
Sbjct: 385 SLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSIIDYLKEK-KCNSII 443
Query: 529 TTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQ 588
TTH+ E+K Y+ + E A MEFD L PTY++L G+PG S+A+ IA+RLG+P +++
Sbjct: 444 TTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTIAKRLGIPQEIIE 503
Query: 589 NARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCA 648
A+ + +I E++I + K++ L+ + L + +++ RK LE
Sbjct: 504 KAQSYISEDNKKI-ELMINNIKNKSESLDKMQTELTGLREAAKMNQEKWEEERKALEREK 562
Query: 649 SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
++ +K S + + ++A +L+ K Q+ S Q+ ++
Sbjct: 563 NEILKKA-------------YEDSEKMMNEMRAKASALIEK-IQKEEHSKEQA---KQIQ 605
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
KN ++L+S ++ + ++ K +K+ K GD V V + + T
Sbjct: 606 KNLNMLSSALKE--------EKNKTITLNKTMKKKAHFKE------GDRVFVKNINQFAT 651
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+K+ KE VQ G +K + F +I
Sbjct: 652 VLKINAMKESAQVQAGILKLEVPFEEI 678
>gi|418325075|ref|ZP_12936285.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|420185530|ref|ZP_14691622.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
gi|365228981|gb|EHM70153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|394254516|gb|EJD99485.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
Length = 782
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|295696872|ref|YP_003590110.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
gi|295412474|gb|ADG06966.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
Length = 783
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 221/394 (56%), Gaps = 42/394 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ I + L+ITGPNTGGKT+ LKT GL MA++GL I ++E +++ F+ +FA
Sbjct: 317 VPVDVLIGDEYHALIITGPNTGGKTVVLKTAGLLTCMAQAGLFIPAAEGSELSVFERIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFSGH+K I I+ Q +SLVLLDEIGAGT+P EG AL ++L+ F
Sbjct: 377 DIGDEQSIEQSLSTFSGHMKHIIEILDQVNERSLVLLDEIGAGTDPAEGAALAEAILQFF 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G + TIATTH+G+LK Y+ NA +EFD L+PTY++L GVPGRS+A+ +A
Sbjct: 437 VDRG-IRTIATTHYGDLKAFAYTTPGVMNASVEFDPETLRPTYRLLIGVPGRSNALAVAA 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ AR GA + ++I ++E + Q E AR L R + R
Sbjct: 496 RLGLGQEILDRARHRLGADDVRVEDMIRQLETARNQAREEADRAR----LDR---EEASR 548
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R++ Q+ + A AR +V ++ +++ + R L + L+
Sbjct: 549 LRQQWESEVRRWEAEADQRTAQAEERARRIVLQAEREVKDVLEELRRLSREDRSSLK--- 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPA-----TASSSVVKDIKQSPRVKRTELPN 753
+H T Q+ +D+V+ PA SS +D P
Sbjct: 606 ------------EHQFTELRQR--LDRVK-PAFRYGRRVPSSTGEDFG---------TPG 641
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
GD V V SFG+KGTV++++ +E +VQ+G +K
Sbjct: 642 PGDAVEVVSFGQKGTVLEIQ--GKEALVQIGALK 673
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 136/338 (40%), Gaps = 58/338 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDS-LRLLDETNAAIEMQKHGS 111
+LRVLE++K+C ++ A+T +G+ L L S ++ S R DE A + G
Sbjct: 5 TLRVLEFEKICQILADHAQTDMGKTLALELLPSSDEEEVRSWCRETDEAQAWDRLA--GG 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSL------------ 159
SL + V ++R R L P + A L++ +Q SL
Sbjct: 63 VSLQ----GATDVTESVRRAARGGVLSPEQLYATAELMRVGRRVQRSLEQVQSKARTPQL 118
Query: 160 -----------------RAAIKED-----------ADLYIRFMPLTQMLYQLMDMLIRNE 191
R ++ ED A L R L + +D LIRN
Sbjct: 119 QALASGIPELPALEKAIRESVGEDGAILDGASSELAALRRRKRALADRIRGALDELIRNP 178
Query: 192 NNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
N + E V+ GR C+ + + SF+G++ S+SG IEP + VPL +EL+
Sbjct: 179 NTQKYLQEPLVTVRDGRYCVPVRVEFKNSFRGIVHDQSASGQTWFIEPAAIVPLGNELRG 238
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
A + E +L+ L+ + + + K + + +LD A++ + SP+
Sbjct: 239 LEAQEEREIERILVRLSALVGQEESGLSKAVECLGRLDFALAKSRLAQQMDAVSPHFVGG 298
Query: 307 QDMKRSLTHEPVTSKVSSSER--EWTIYLPKAYHPLLL 342
++ P+ K ER + + YH L++
Sbjct: 299 GKLRLRRCRHPLIPK----ERVVPVDVLIGDEYHALII 332
>gi|418616514|ref|ZP_13179438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|420182831|ref|ZP_14688964.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|420214358|ref|ZP_14719637.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|420217164|ref|ZP_14722348.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
gi|374820592|gb|EHR84668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|394249294|gb|EJD94507.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|394283723|gb|EJE27888.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|394290520|gb|EJE34375.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
Length = 782
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|418637528|ref|ZP_13199847.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
gi|374838774|gb|EHS02309.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
Length = 783
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 298/624 (47%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
TQ + Q +D +++N++N+ + V+ + R I A+ + FKG++ S+SG
Sbjct: 167 TQRIRQNLDRIVKNQSNQKKLSDAIVTVRNERNVIPVKAEYRQDFKGIVHDQSASGQTLY 226
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + ++ + LD + A+A
Sbjct: 227 IEPSSIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKAR 286
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + TIYLP A+HPLL
Sbjct: 287 YASAIKGTKPTFY----------------------EARTIYLPNAFHPLL---------- 314
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
K+ ANT +E A V
Sbjct: 315 -DKETVVANT-------------------------------IEFADDV----------ET 332
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F VF DIGDEQS+ QSLS
Sbjct: 333 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFHDVFCDIGDEQSIEQSLS 392
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ Q+ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 393 TFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMSILDYTRALGALV-MATTH 451
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 452 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLNLSIINKAK 511
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E H L ++ H +L + ++ Q
Sbjct: 512 TMIGTDEQEINLMIESLEKNAKRVDTQRIELDHLLKEAQQTHDDLEK------QYNQFQA 565
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K Q I DA A Q +A++ + K + LR + ++ +
Sbjct: 566 YEK-QLIEDAK--------DKANQRVKAATKEADEILKELRTLRDQKGADVKEHELIDKK 616
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L + ++ K IKQ + ++ + GD V V S+G+KG V++
Sbjct: 617 KQLDNQYE-----------------AKSIKQQVQKQKYDKIVAGDEVKVLSYGQKGEVLE 659
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ +E VVQ+G +K + D+
Sbjct: 660 L-VGNDEAVVQMGIIKMKLPIEDL 682
>gi|113953514|ref|YP_731592.1| MutS2 family protein [Synechococcus sp. CC9311]
gi|113880865|gb|ABI45823.1| MutS2 family protein [Synechococcus sp. CC9311]
Length = 805
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 221/733 (30%), Positives = 333/733 (45%), Gaps = 142/733 (19%)
Query: 59 WDKLCHSVSSFARTSLGR------------EATLT------QLWSINQTYQDSLR---LL 97
W +LC S+FA T GR E TLT +L S++ L +
Sbjct: 26 WPRLCQHFSTFASTPQGRQQCLKGQLPADLETTLTYQARSMELASLDGLLDGGLSFQGVY 85
Query: 98 DETNAAIEMQKHGSCS-LDLTGVDLSLVKSAIREVRRA---SPLRPNEALAVVALLQFSE 153
D + K G+ S +L V +L +A R +RR LRP ALL+
Sbjct: 86 DLEMVLLRCYKGGTASGEELLSVAHTL--AAARRLRRQIDDPDLRPR----CSALLENVA 139
Query: 154 TL---QLSLRAAIKEDA-----------DLYIRFMPLTQMLYQLMDMLIRNENNESLFLE 199
TL + L+ A++E DL +++ Q + ++R +
Sbjct: 140 TLPELEQRLKFALEEGGRVANRASESLEDLRLQWQVARQERRDRLQAVVRRWSTLLQDTV 199
Query: 200 VSSIHGR--LCIRTGADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAE 255
++ HGR L ++ GA G++ SSSG +EP + + L + L + E
Sbjct: 200 IAERHGRPVLAVKAGAAS-QCPGMVHDSSSSGNTVFVEPKTVIGLGNRLAALDGRIRDEE 258
Query: 256 EDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTH 315
VL L+ + D I++++ +++LD+ AR Y G P +
Sbjct: 259 RRVLAELSAAVAEQNDVIDRLMAVLLKLDLALARGRYGQWLGAVPPRL------------ 306
Query: 316 EPVTSKVSSSEREWTIYLPKAYHPLLL-QQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+E + ++ + HPLL+ QQ K+ + +LR
Sbjct: 307 --------EAEADSPFHILELRHPLLVWQQRKEGGAPVVPVSVEVSEQLR---------- 348
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
V+ ITGPNTGGKT+ LK++GLA +
Sbjct: 349 ------------------------------------VVAITGPNTGGKTVTLKSIGLAAL 372
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI---ISQSTSQS 491
MA++G+ I + +PW V ADIGDEQSL QSLSTFSGH+K+IG+I I+ + +
Sbjct: 373 MARAGMWIPCNGSPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPAPA 432
Query: 492 LVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACME 551
LVLLDE+GAGT+P EGTAL ++LL A + LTIATTH GELK LKYS+ FENA +
Sbjct: 433 LVLLDEVGAGTDPSEGTALAIALLRNLANC-ARLTIATTHFGELKALKYSDSRFENASVS 491
Query: 552 FDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG-AASAEINEVIIEMER 610
FD L PTY++LWG+PGRS+A+ IA RLG V++ ARQL + ++N VI +E
Sbjct: 492 FDSDSLSPTYQLLWGIPGRSNALAIATRLGFDSGVIEQARQLLKPSGDGDVNAVIRGLEE 551
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQ----RFRKVQKISDAAAIAR 666
+ + +A L + LH+ LL+ + ++ A Q R R I D R
Sbjct: 552 QRQRQQAAAEDAAALLARTELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVR 611
Query: 667 SLVHK-------------SAQQLCPSASQARSLVHKRAQ-QLRPSASQSLHCTKVGKNQH 712
L+ + + Q+L S+ RS+ +R + RPS + + + K
Sbjct: 612 HLIRRLRDQKADGETARSAGQRLRKLESKHRSVPERRLHPEWRPSVGERIRLLALDKAAE 671
Query: 713 VL--TSNFQQTTV 723
VL + + QQ +V
Sbjct: 672 VLEVSDDGQQLSV 684
>gi|303275984|ref|XP_003057286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461638|gb|EEH58931.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1075
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 165/268 (61%), Gaps = 19/268 (7%)
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLK 427
L GG AR D N + +++ PVP+D+F+ R +VITGPNTGGKT +K
Sbjct: 490 LLGGRLARN---DPN------RPGVVKIKGPVPVDVFVPLNARCVVITGPNTGGKTAAMK 540
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQS 487
VGLA +MA++GL I +E AK+PWFDSV DIGD Q L SLSTFS L + I+S +
Sbjct: 541 AVGLAALMARAGLFI-PAETAKLPWFDSVLVDIGDSQDLMTSLSTFSARLAKQRAILSAA 599
Query: 488 TSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA-------ESGSLLTIATTHHGELKTLKY 540
+ SLVL+DE+G GT+P EG+A+G +LLE A + + LT+ATTHHGELK LKY
Sbjct: 600 SPTSLVLMDEVGTGTSPAEGSAIGAALLERLAGVAGGNSANAAGLTLATTHHGELKALKY 659
Query: 541 --SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 598
FENA +EFDE L PTY++LWGVPGRS A+ IAER GL VV +AR + G
Sbjct: 660 EHPGGVFENAAVEFDEALLAPTYRLLWGVPGRSRALQIAERFGLEPDVVDDARSMLGEGR 719
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFL 626
+ I +E + E + AR L
Sbjct: 720 VTLESTISALEIARRGADEDIATARRLL 747
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ESL W +LC ++ +A T+LG+EA T L ++ S LLDET+AA+ M+ H
Sbjct: 66 ESLVACGWHELCEHLAGYASTALGQEACRT-LPLPSEGPWASEALLDETSAAVAMESHHG 124
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
SLD G+ + V+ A+ + + + L +E A+++ + + L S+ +K +
Sbjct: 125 VSLDFGGILSAEVRRALYKSEKYASLGGDELAAMMSFIAAVKRLTKSVE-GVKVNGAPPP 183
Query: 172 RFMPL------TQMLYQLMDMLIRNENNESLFLEVSSI---------------------- 203
PL T ++ D + +++ F + +S
Sbjct: 184 ELEPLRLLTSTTIAHGEVADAIRACVDDQGGFKDGASPELRRARSQKSAAESKLRRALQS 243
Query: 204 --------HGRLCIRTGADQLSFKGLLLSSSGIGS--VIEPLSAVPLNDELQQARASVTK 253
GR+ + D+ L++ + G+ ++EP S V LN L QA A+
Sbjct: 244 FGGSTVSHQGRMVLAV--DKAPPGALVVGVAAGGALVLVEPPSVVLLNGTLAQANAAEET 301
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
A + V LT ++ ++ L+ + +LDVV A+A + + P LP
Sbjct: 302 AIDAVRRRLTYEVAAVCVDLLAALDVVTRLDVVAAKARQAAALNAIRPTFVLP 354
>gi|420194100|ref|ZP_14699929.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
gi|394266798|gb|EJE11423.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
Length = 782
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + E TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEERTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRCLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|308068160|ref|YP_003869765.1| MutS2 protein [Paenibacillus polymyxa E681]
gi|305857439|gb|ADM69227.1| MutS2 protein [Paenibacillus polymyxa E681]
Length = 789
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 221/411 (53%), Gaps = 51/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHIHAMGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLPG ++ AR + AS E N + E ER K + L EA
Sbjct: 492 AIAERLGLPGRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRKEMEA--- 548
Query: 626 LMLSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LR+R + L+ SQR R ++K D AR LV K AR
Sbjct: 549 -----------LRSRHQTELDKLESQRDRMLEKAEDE---ARVLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K LR A + K +H L + ++ +D+ E P S VK P
Sbjct: 584 SEAEKIITDLRKLAQEEGASVK----EHKLIAARKE--LDEAE-PKQRKKSTVK----RP 632
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ +K E VVQ+G MK + D+
Sbjct: 633 AATRTRSIMAGDEVSVHSLNKKGHVVELSGTK-EAVVQLGIMKMKVSLDDL 682
>gi|226311231|ref|YP_002771125.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
gi|254766594|sp|C0Z9F1.1|MUTS2_BREBN RecName: Full=MutS2 protein
gi|226094179|dbj|BAH42621.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
Length = 785
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 197/660 (29%), Positives = 318/660 (48%), Gaps = 128/660 (19%)
Query: 155 LQLSLRAAIKEDADLY----IRFMPLTQMLYQL-------MDMLIRNENNESLFLE-VSS 202
L+ +R + E+ D+ + + Q + QL +D + R+ + + +E + +
Sbjct: 131 LETEIRRCVDENGDILDSASLELRQVRQEIRQLESRIREKLDQMTRSSTYQKMLMENIVT 190
Query: 203 IHG-RLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDV 258
I G R I + S G ++ S+SG IEP V +N++L++ R + E +
Sbjct: 191 IRGDRFVIPVKQEYRSVFGGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERI 250
Query: 259 LLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
L LTE++ ++ + + + +LD + A+A + S P I
Sbjct: 251 LYVLTEQVSFAVEALVENTEALTELDFMFAKAQLAWSMKAICPRI--------------- 295
Query: 319 TSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGE 378
++R + + + KA HPL+
Sbjct: 296 ------NDRGY-VNMRKARHPLI------------------------------------- 311
Query: 379 KDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
P E+ V P+D+ + + + +V+TGPNTGGKT+ LKT+GL +M +
Sbjct: 312 ------PREVVV---------PVDVELGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMTMA 356
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GLHI + E +++ F S+FADIGDEQS+ QSLSTFS H+ I I+++ +SLVL DE+
Sbjct: 357 GLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNIIQILAKMDDKSLVLFDEL 416
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL MS+++ +SG+ L +ATTH+ ELK Y NA +EFD L+
Sbjct: 417 GAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSELKAYAYDRPEVINASVEFDVQTLR 475
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV---IIEMERFKTQF 615
PTY++L GVPGRS+A IA RLGLP ++ AR G+ S E N+V I +ER +
Sbjct: 476 PTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR---GSISEEDNQVESMIASLERNRKSA 532
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
A+ + L L R + A ++ +++++ D A IA L + A+
Sbjct: 533 EADRLAAKAARQEAEELRTQLEEERAQF----AEEKNKRMERAEDEARIAVQLAKEEAET 588
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ R L A+ + + + K L + + +KV+ PA A
Sbjct: 589 II------RELREMMAEGMEIKEHRLIDAKK------RLGNAVLELEKEKVKKPAKA--- 633
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+ T++ VGD V V+SFG+KGTV++ + + EE +VQ+G MK +K D+
Sbjct: 634 ----------VRATQI-KVGDEVMVTSFGQKGTVLE-KVNNEEFLVQIGIMKMKVKRDDM 681
>gi|357237673|ref|ZP_09125014.1| MutS2 family protein [Streptococcus ictaluri 707-05]
gi|356753863|gb|EHI70966.1| MutS2 family protein [Streptococcus ictaluri 707-05]
Length = 778
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 238/408 (58%), Gaps = 50/408 (12%)
Query: 393 LELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEY 447
L + HP VP D+ +++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ +
Sbjct: 300 LSVRHPLLTEAVPNDLQFSKELAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKG 359
Query: 448 AKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEG 507
++V F+ ++ADIGDEQS+ Q+LSTFS H+ I +I+ Q+ SLVL DE+GAGT+P EG
Sbjct: 360 SRVALFNEIYADIGDEQSIEQNLSTFSSHMTHIVSILDQADQDSLVLFDELGAGTDPQEG 419
Query: 508 TALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGV 567
+L M++LE + S+ T+ATTH+ ELK DF ENA MEFD +LKPTY+ + GV
Sbjct: 420 ASLAMAILEQLRLT-SIKTMATTHYPELKAYGIETDFVENASMEFDSTRLKPTYRFMQGV 478
Query: 568 PGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM 627
PGRS+A IA RLGL +V+ A+++ S ++N +I E+ + Q LE H
Sbjct: 479 PGRSNAFEIASRLGLAPHIVKEAQEMTDTDS-DVNRII---EQLEAQTLESRKRLEHIKS 534
Query: 628 LSR-NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARS 685
+ + NL N R +K+ + + ++++K S + AQ++ A +++ +
Sbjct: 535 VEQDNLKFN--RAVKKLYNEFSHAKDKELEKAS-----------QEAQEIVDMALTESEA 581
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK-VEHPATASSSVVKDIKQSP 744
++ K LH K ++ + +T + K V P + + V+K
Sbjct: 582 ILEK------------LHDKAELKPHQIIEA---KTELKKLVPEPNLSQNKVLK------ 620
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIK-VEPSKEEIVVQVGNMKWIMK 791
+ K+ P VGD + V+++G++GT++K V+ K E QVG +K +K
Sbjct: 621 KAKKLRAPRVGDGILVTAYGQRGTLVKQVKDKKWE--AQVGLIKMTLK 666
>gi|251810592|ref|ZP_04825065.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876408|ref|ZP_06285275.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|417913383|ref|ZP_12557050.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|418624906|ref|ZP_13187566.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|420172837|ref|ZP_14679335.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|420198524|ref|ZP_14704232.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|420226953|ref|ZP_14731726.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|421607338|ref|ZP_16048584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
gi|251805752|gb|EES58409.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295433|gb|EFA87960.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|341655665|gb|EGS79389.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|374826171|gb|EHR90079.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|394241514|gb|EJD86928.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|394264219|gb|EJE08915.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|394297454|gb|EJE41051.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|406657130|gb|EKC83523.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
Length = 782
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 302/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A + SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANKRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|220931412|ref|YP_002508320.1| MutS2 family protein [Halothermothrix orenii H 168]
gi|254766598|sp|B8D298.1|MUTS2_HALOH RecName: Full=MutS2 protein
gi|219992722|gb|ACL69325.1| MutS2 family protein [Halothermothrix orenii H 168]
Length = 791
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 225/395 (56%), Gaps = 42/395 (10%)
Query: 398 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 457
PVPIDI + + + LVITGPNTGGKT+ LKTVGL V+M ++GLHI + E + F+ V+
Sbjct: 321 PVPIDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVY 380
Query: 458 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 517
ADIGDEQS+ Q+LSTFS H+ +I + ++ ++SLVLLDEIG GT+P EG ALG+++LE
Sbjct: 381 ADIGDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEH 440
Query: 518 FAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIA 577
E G + TIATTH+ E+K+ YS D ENA +EFD L+PTY++L G+PG S+A IA
Sbjct: 441 LRERG-VTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIA 499
Query: 578 ERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLL 637
+LGLP ++++ ++L ++ +I ++ E + + L + + L
Sbjct: 500 LKLGLPHDIIKDGKELMSGDDIKVENIISDLN----------EERKKYEQLKIEIEERLE 549
Query: 638 RTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 697
++K Q++ + ++D + L+ ++ ++ Q ++ +
Sbjct: 550 AVKKK------EQKYDSL--LTDLEKRKKKLITEAREEAL--------------QIIKKT 587
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS-SSVVKDI--KQSPRVKRTELPNV 754
+S + KN+ + ++ +D+VE+ + K+I K+ + RT + +
Sbjct: 588 RKESKEILRRLKNKEFAS----RSDIDRVENEINLNLKETEKEISEKRQNKDGRTRVKEI 643
Query: 755 --GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
GD V + G+KG VI V+ K E V+Q G MK
Sbjct: 644 SCGDQVRLKKTGQKGEVISVDREKGEAVIQAGIMK 678
>gi|457094647|gb|EMG25166.1| Recombination inhibitory protein MutS2 [Streptococcus parauberis
KRS-02083]
Length = 781
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 234/402 (58%), Gaps = 47/402 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PVP D+ ++ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ +K+ F+
Sbjct: 310 LQKPVPNDLHFSKDLTVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADYGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ Q+T+ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 GIFADIGDEQSIEQSLSTFSSHMTHIVSILDQATADSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK ++F ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 430 LEEL-RLKEIKTMATTHYPELKAYGIESEFVENASMEFDSNSLQPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL G +V +A Q + +++N +I E+ ++Q LE H + + NL
Sbjct: 489 EIARRLGLAGHIVTDA-QNFTDTDSDVNRII---EKLESQTLESRKRLEHIKEVEQDNLK 544
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHK--R 690
N R +K+ + +R ++++K++ K AQ++ A +++ S++ K
Sbjct: 545 FN--RAVKKLYNEFSHERDKEMEKVT-----------KEAQEIVDLALAESESILAKLHD 591
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q L QT + K + V+K + K+
Sbjct: 592 KSQLKP------HEVIEAKTQ--LKKLVPQTDLSK--------NKVLK------QAKKLR 629
Query: 751 LPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
VGD + VS++G++GT+I +++ K E QVG +K +K
Sbjct: 630 AARVGDDIIVSAYGQRGTLINQLKDQKWE--AQVGLIKMTLK 669
>gi|417910746|ref|ZP_12554462.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|418622194|ref|ZP_13184950.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|420187633|ref|ZP_14693653.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
gi|341654934|gb|EGS78670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|374827569|gb|EHR91431.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|394256075|gb|EJE01011.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
Length = 782
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 301/627 (48%), Gaps = 119/627 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP +HPLL
Sbjct: 286 YAHTIKGTKPTF----------------------KEDRTIYLPNTFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|374322955|ref|YP_005076084.1| MutS2 protein [Paenibacillus terrae HPL-003]
gi|357201964|gb|AET59861.1| MutS2 protein [Paenibacillus terrae HPL-003]
Length = 789
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 221/411 (53%), Gaps = 51/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHMHALGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLPG ++ AR + AS E N + E ER K + L E
Sbjct: 492 AIAERLGLPGRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRGEMEE--- 548
Query: 626 LMLSRNLHKNLLRTRRK-ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LRTR + LE +QR R ++K +D ARSLV K AR
Sbjct: 549 -----------LRTRHQNELEKLEAQRERLLEKAADE---ARSLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S LR A + K +H L + ++ +D+ E P S VK P
Sbjct: 584 SEAEIIIADLRKLAQEEGASVK----EHRLIAARKE--LDEAE-PKQRKKSAVK----RP 632
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ SK E VVQ+G MK + D+
Sbjct: 633 AATRTRSIVAGDEVSVHSLNKKGHVVELSGSK-EAVVQLGIMKMKVSLDDL 682
>gi|386040047|ref|YP_005959001.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|343096085|emb|CCC84294.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 789
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 220/411 (53%), Gaps = 51/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHIHALGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLPG ++ AR + AS E N + E ER K + L EA
Sbjct: 492 AIAERLGLPGRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRKEMEA--- 548
Query: 626 LMLSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LRTR + L+ SQR R ++K D AR LV K AR
Sbjct: 549 -----------LRTRHQTELDKLESQRDRMLEKAEDE---ARVLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K LR A + K +H L + ++ +D+ E S+ + I
Sbjct: 584 SEAEKIITDLRRLAQEEGASVK----EHKLIAARKE--LDEAEPKQRKKSTAKRSI---- 633
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ SKE I VQ+G MK + D+
Sbjct: 634 -TTRTRSIMAGDEVSVHSLNKKGHVVELTGSKEAI-VQLGIMKMKVSLDDL 682
>gi|406837044|ref|ZP_11096638.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
Length = 784
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 217/776 (27%), Positives = 360/776 (46%), Gaps = 148/776 (19%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L LE+DK+ V+ + T G++ L L+ + Q L L +AA ++ G
Sbjct: 6 LTTLEYDKIKQQVAQYLVTPAGKK-LLANLYPSSNYQQVQLDLNRTQDAADILRLKGGIP 64
Query: 114 LD-----------------LTGVDLSLVKSAIREVRRASPLRPNEALAVVAL-------- 148
L L G +L+ + +R A+ V L
Sbjct: 65 LPKLADVHLQLKRLKINAALNGKELAEIAKVLRSAAEVKSFFSQLAIEEVNLHSLNALAN 124
Query: 149 -LQFSETLQLSLRAAIKEDA----DLYIRFMPLTQMLYQL-------MDMLIRNENNESL 196
LQ L L +++ED D ++ + + + QL ++ LIR ++ + L
Sbjct: 125 QLQVFPQLTKQLLRSLEEDGHLSDDASVKLAAIRRSMSQLRLQLRSQLNALIRGKSAKYL 184
Query: 197 FLEVSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
V +I R I + F G++ S+SG +EP +A+ LN+ L+Q +A+
Sbjct: 185 TEPVITIRDDRYVIPVKQEYRGHFGGVVHDQSASGQTLFVEPAAALDLNNRLRQRQANER 244
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ + +L AL+ + + EI + + D NA+A Y+ T P + +
Sbjct: 245 EEIQRILTALSASLAPYVKEIAANAALLGEFDFANAKAKYAQQLKATYPRLSV------- 297
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
+ +YL +A+HPL L +K+
Sbjct: 298 ---------------DNQVYLRQAWHPL----------------------LNEKKV---- 316
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
V DI + + + +VITGPNTGGKTI LKT+GL
Sbjct: 317 --------------------------VRNDIMLGQDYQTMVITGPNTGGKTITLKTLGLI 350
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSL 492
+M +SGL I + E +++ F +FADIGDEQS+ Q+LSTFS HL I I++ SL
Sbjct: 351 QLMGQSGLFIPAFEDSQIGVFKEIFADIGDEQSIEQNLSTFSAHLTNIVEILNNCDQSSL 410
Query: 493 VLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
VLLDE+GAGT+P EG AL +++L+A A GS + +ATTH+ ELK Y NA MEF
Sbjct: 411 VLLDELGAGTDPQEGAALAVAILDALAALGSYV-VATTHYPELKAYGYERLSTINASMEF 469
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D L+PTY++L G+PG+S+A I++RLGL ++ ARQL S ++N++I ++ R +
Sbjct: 470 DSQTLQPTYRLLIGIPGQSNAFAISQRLGLSAEIIAAARQLTSNQSQDLNQMIQDLVRKR 529
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKS 672
Q E +L + LH +L A +F K A + ++ +H
Sbjct: 530 QQAEEERARLAKYLTEGQELHHDL---------QVAFNKFEK----QKAHLLEQAKLH-- 574
Query: 673 AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATA 732
A Q+ ASQ + +Q++ +A+ S+ K ++T+ +T ++++ P +
Sbjct: 575 ANQIIDQASQRSDELISELRQMKLNANASV------KEDQLITA---KTKMNELHQPLLS 625
Query: 733 SSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+ V++ +K + ++K P GD V V + ++GT+++ + K E VQ+G++K
Sbjct: 626 KNRVLRKVKLNQQLK----P--GDDVLVKPYDQQGTLLE-KTGKHEWEVQLGSLKM 674
>gi|310640954|ref|YP_003945712.1| muts2 protein [Paenibacillus polymyxa SC2]
gi|309245904|gb|ADO55471.1| MutS2 protein [Paenibacillus polymyxa SC2]
Length = 733
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 220/411 (53%), Gaps = 51/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHIHALGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLPG ++ AR + AS E N + E ER K + L EA
Sbjct: 492 AIAERLGLPGRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRKEMEA--- 548
Query: 626 LMLSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LRTR + L+ SQR R ++K D AR LV K AR
Sbjct: 549 -----------LRTRHQTELDKLESQRDRMLEKAEDE---ARVLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K LR A + K +H L + ++ +D+ E S+ + I
Sbjct: 584 SEAEKIITDLRRLAQEEGASVK----EHKLIAARKE--LDEAEPKQRKKSTAKRSI---- 633
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ SKE I VQ+G MK + D+
Sbjct: 634 -TTRTRSIMAGDEVSVHSLNKKGHVVELTGSKEAI-VQLGIMKMKVSLDDL 682
>gi|357039259|ref|ZP_09101053.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355358158|gb|EHG05926.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 788
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 223/397 (56%), Gaps = 38/397 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I + +LVITGPNTGGKT+ LKTVGL V+MA SGLH+ + + + FD VFA
Sbjct: 314 VPISIQLGEAFDMLVITGPNTGGKTVSLKTVGLLVLMAHSGLHVPAEDGTLIGMFDQVFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H I NI+ ++ ++SLVLLDE+GAGT+P EG+AL ++L+
Sbjct: 374 DIGDEQSIEQSLSTFSSHTINIVNILKKAGNKSLVLLDELGAGTDPTEGSALARAILDQL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ + +ATTH+GELK+ ++N+ ENA +EF+ L+PTY++L G PGRS+A IA
Sbjct: 434 RQQGAKV-VATTHYGELKSYAFANERVENASVEFNSQTLRPTYRLLIGRPGRSNAFEIAL 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+Q AR ++ +++ E+E + Q A + + + +
Sbjct: 493 RLGLNESVIQRARGFLTEEQVQVADLMRELENARVQ-------AEQEQAEAEKIRREAEQ 545
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKS---AQQLCPS--ASQARSLVHKRAQQ 693
R + +E R RK + I+ A A +R +V K+ A+QL A+ H R Q
Sbjct: 546 YREQYMELAEKIRQRKDEIITRAVADSREMVKKARLEAEQLVEELRAALKEQTTHNREQ- 604
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
S S + C K + Q + + Q + EHP A ++V
Sbjct: 605 ---SISNARQCLK--QLQLKIDAKAPQ---NAYEHPTEAVTNV----------------K 640
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
GD V + +G++G V++ +++ VQVG ++ +
Sbjct: 641 PGDEVFIPKYGQRGVVLEAPGQDDQVQVQVGMIRMTI 677
>gi|227524346|ref|ZP_03954395.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
gi|227088577|gb|EEI23889.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
Length = 788
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 283/598 (47%), Gaps = 121/598 (20%)
Query: 207 LCIRTGADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTE 264
L IR Q F G++ S+SG +EP + V +N++L++ + + E +L LT+
Sbjct: 199 LPIRADYKQ-HFGGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEERRILAELTD 257
Query: 265 KMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSS 324
++ E+ +N + QLD VNA+A ++ P I
Sbjct: 258 LIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQPEI--------------------- 296
Query: 325 SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLS 384
R+ + L +A HPL+ +D AN
Sbjct: 297 -SRDNVVNLRQARHPLI-----------ARDKVVAN------------------------ 320
Query: 385 PSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
DI I + R ++ITGPNTGGKTI LKTVGL +M +SGL I +
Sbjct: 321 -----------------DIQIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITA 363
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+E +++ FD VFADIGD+QS+ +LSTFS H+ I +I++ +SQSL+LLDE+GAGT+P
Sbjct: 364 NEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDP 423
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++++A +SG L IATTH+ ELK Y+ NA MEFD L+PTY+ L
Sbjct: 424 KEGAALAMAIIDAIHQSGCEL-IATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFL 482
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
G+PG+S+A+NIA +LGL +++ AR + + +IN +I E+ + + +
Sbjct: 483 MGIPGQSNALNIASKLGLSKGIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDE 542
Query: 625 FLMLSRNLHKNL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
L S LH +L + +LE Q + V+K +A + +HK QQ+
Sbjct: 543 QLTDSTKLHDDLQNQFTQYQNQKDHLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG 602
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
SA + L+ + R + +L KV + + +F HP
Sbjct: 603 QSAIKENELIDAKGALNRLEVTPNLKKNKVLRKEKA-KHDF---------HP-------- 644
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S+G++GT+I+ E + VQ+G +K + D+
Sbjct: 645 -----------------GDEVLVKSYGQQGTLIRQEKNG-AWEVQLGILKMQIDENDL 684
>gi|33860777|ref|NP_892338.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33633719|emb|CAE18676.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 803
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 217/786 (27%), Positives = 352/786 (44%), Gaps = 166/786 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L +SSFA T +G A L I Y+ S RLL ET E++K
Sbjct: 19 ESISLLEWDNLKIQLSSFASTKMGENAILES--EIPTEYEISRRLLQETIEINELEKTLD 76
Query: 112 CSLDLTGV-DLSLVKSAIREVRRASPLRPNEALAVVA-----------LLQFS------- 152
S+ +GV D+S I + + +E L + LL F
Sbjct: 77 KSISFSGVFDIS---KNIEICSKGGVINSSELLEIAETISAAKDLKKILLDFEARPFISS 133
Query: 153 --------ETLQLSLRAAIKEDADLYIRFMPLTQMLYQ-----------LMDMLIRNENN 193
++ L+ I+ + + R L Q L+D I+ N
Sbjct: 134 FLNRLIDHNQIEKILKNGIESNGRISDRASQKLANLRQDLLSKKSERRILVDKFIQKNIN 193
Query: 194 ESLFLEVSSIHGRLCIRTGADQLSF----KGLLLSSSGIGSVI--EPLSAVPLNDELQQA 247
+++ + I R A ++ F KG++ SS G+ I EP S V +++
Sbjct: 194 ---YIQDTIIGDRYGRPVVAIKVQFGEKFKGIIHDSSASGNTIYLEPESIVFKGNKIASM 250
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
A V E +L ++ + + + +M + +++ + R+ YS GG +P +
Sbjct: 251 EARVAGEEFKLLKEWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIGGNAPIV---- 306
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRK 367
+ P+ + + S HPLL+ ++K+K
Sbjct: 307 ------ENNPIVNLIGFS------------HPLLIWENKKK------------------- 329
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLK 427
E PV ID I R T+V+ ITGPNTGGKT+ LK
Sbjct: 330 --------------------------EAPKPVSIDFHINRNTKVVAITGPNTGGKTVALK 363
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQS 487
+G+A++MA+SGL I S + +P+ ++F DIGD+QSL +LSTFSGH+ +I NI+
Sbjct: 364 GLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQSLEGNLSTFSGHILRIRNILESL 423
Query: 488 TSQ---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
++ S+VLLDEIG+GT+P EGTAL ++LL+ FA + S +T+ATTH+G++K LKYS+D
Sbjct: 424 NNKKGLSVVLLDEIGSGTDPSEGTALAIALLKEFA-TLSDITLATTHYGDIKALKYSDDR 482
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE-INE 603
FEN + FDE KP Y + WG+PGRS+A++I+ R+G+ ++ A E IN
Sbjct: 483 FENVSVAFDEESFKPRYTLNWGIPGRSNALSISRRIGIDEKILNEAANYLKPKEVENINS 542
Query: 604 VI--IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
+I +E ER K Q EA + + LH E ++ F+K ++A
Sbjct: 543 IIKGLEDERIKQQ--NSAEEAAELIARTEILHD----------EIKSNYEFQK----NNA 586
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
I S K ++ + + + +L+ K Q N + S
Sbjct: 587 EKIQESEKQKLSKYIRAAKKEVINLIKKLKDQ----------------NANGEDSRLIGI 630
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
+ ++E +++ K+I SP+ +GD + + S G +I ++ V
Sbjct: 631 RLKEIEKEHLTQTNINKEISWSPK--------IGDFIKIKSLNSTGQIIDIDRKARSFEV 682
Query: 782 QVGNMK 787
+ G+ +
Sbjct: 683 KCGSFR 688
>gi|456369565|gb|EMF48465.1| Recombination inhibitory protein [Streptococcus parauberis
KRS-02109]
Length = 778
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 233/402 (57%), Gaps = 47/402 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PVP D+ ++ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ +K+ F+
Sbjct: 307 LQKPVPNDLHFSKDLTVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADYGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +II Q+T+ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVSIIDQATADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK ++F ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEEL-RLKEIKTMATTHYPELKAYGIESEFVENASMEFDSNSLQPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V +A Q + +++N +I E+ ++Q LE H + + NL
Sbjct: 486 EIARRLGLASHIVTDA-QNFTDTDSDVNRII---EKLESQTLESRKRLEHIKEVEQDNLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHK--R 690
N R +K+ + +R ++++K++ K AQ++ A +++ S++ K
Sbjct: 542 FN--RAVKKLYNEFSHERDKEMEKVT-----------KEAQEIVDLALAESESILAKLHD 588
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q L QT + K + V+K + K+
Sbjct: 589 KSQLKP------HEVIEAKTQ--LKKLVPQTDLSK--------NKVLK------QAKKLR 626
Query: 751 LPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
VGD + VS++G++GT+I +++ K E QVG +K +K
Sbjct: 627 AARVGDDIIVSAYGQRGTLINQLKDQKWE--AQVGLIKMTLK 666
>gi|319892134|ref|YP_004149009.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161830|gb|ADV05373.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
Length = 782
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 281/582 (48%), Gaps = 114/582 (19%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--I 273
F G++ S+SG IEP + V LN+++ + R+ + +L LT ++ + + I
Sbjct: 210 FNGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAELTAEVAEEAEACLI 269
Query: 274 EKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYL 333
+ + G LD + +A Y+ GT P + E +YL
Sbjct: 270 SEQVMG--HLDFLIGKARYAAKIKGTKPTFAV----------------------ERQVYL 305
Query: 334 PKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSAL 393
PKA+HPLL +D ANT
Sbjct: 306 PKAFHPLL-----------DRDTVVANT-------------------------------- 322
Query: 394 ELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
I + ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F
Sbjct: 323 ---------IEFESSIQTVIITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVF 373
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
D+VF DIGDEQS+ QSLSTFS H+K I NI+ ++ +SL+L DE+GAGT+P EG AL MS
Sbjct: 374 DNVFCDIGDEQSIEQSLSTFSSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMS 433
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
+L+ G+L+ +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 ILDHVHGMGALV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNA 492
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH 633
+I++RLGL ++ +A+ + G EINE+I +E+ + + E + + +H
Sbjct: 493 FDISKRLGLGLKIINHAKSMIGQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIH 552
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
+L R E + R +++ D A Q +A + + K +
Sbjct: 553 NDLSRA----YEQYQNMESRLIEEAKD-----------KANQRVKAAMEEADDILKSLRD 597
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
+R + ++ + L ++ K IKQ+ + ++ +
Sbjct: 598 MRDQKGAEVKEHELIDQRKRLEDQYE-----------------AKSIKQNVQKQKWDEIK 640
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S+G+KG V++V S EE VVQ+G +K + +D+
Sbjct: 641 AGDEVKVLSYGQKGEVLEV-LSDEEAVVQMGIIKMKLPLSDL 681
>gi|125973529|ref|YP_001037439.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281417732|ref|ZP_06248752.1| MutS2 family protein [Clostridium thermocellum JW20]
gi|229486373|sp|A3DE67.1|MUTS2_CLOTH RecName: Full=MutS2 protein
gi|125713754|gb|ABN52246.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281409134|gb|EFB39392.1| MutS2 family protein [Clostridium thermocellum JW20]
Length = 793
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 216/392 (55%), Gaps = 32/392 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID +I LV+TGPNTGGKT+ LKTVGL +M ++GLHI ++E K+ F V+A
Sbjct: 318 VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I I+ SLVL DE+GAGT+P EG AL MS+LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVLFDELGAGTDPTEGAALAMSILEYL 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
GS T+ATTH+ +LK + F ENAC EF+ L+PTY++L GVPG+S+A I++
Sbjct: 438 RNKGS-TTVATTHYSQLKAYAVTTKFVENACCEFNVETLRPTYRLLIGVPGKSNAFAISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A++ + ++++ +E+ Q +A + + + L K L
Sbjct: 497 RLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEE 556
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+RK+ E+ R R +Q +A A AR ++ ++ ++ S+ R L
Sbjct: 557 QKRKLAEN----RERLIQ---EARAEARKILLEARKEAEEIISKMRRL------------ 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR---VKRTELPNVG 755
Q +H + K L ++ VD +E ++ +P+ VK E G
Sbjct: 598 EQEVHNAQRQKEAEELRLKLKR-KVDSIEETL--------ELPLAPKNALVKPPENLKPG 648
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
D V + + +KGTVI E+VVQ G MK
Sbjct: 649 DSVLIVNLDQKGTVITPPDKDGEVVVQAGIMK 680
>gi|386319584|ref|YP_006015747.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
gi|323464755|gb|ADX76908.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
Length = 782
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 281/582 (48%), Gaps = 114/582 (19%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDE--I 273
F G++ S+SG IEP + V LN+++ + R+ + +L LT ++ + + I
Sbjct: 210 FNGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAELTAEVAEEAEACLI 269
Query: 274 EKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYL 333
+ + G LD + +A Y+ GT P + E +YL
Sbjct: 270 SEQVMG--HLDFLIGKARYAAKIKGTKPTFAV----------------------ERQVYL 305
Query: 334 PKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSAL 393
PKA+HPLL +D ANT
Sbjct: 306 PKAFHPLL-----------DRDTVVANT-------------------------------- 322
Query: 394 ELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
I + ++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F
Sbjct: 323 ---------IEFESSIQTVIITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVF 373
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
D+VF DIGDEQS+ QSLSTFS H+K I NI+ ++ +SL+L DE+GAGT+P EG AL MS
Sbjct: 374 DNVFCDIGDEQSIEQSLSTFSSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMS 433
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
+L+ G+L+ +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 ILDHVHGMGALV-MATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNA 492
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH 633
+I++RLGL ++ +A+ + G EINE+I +E+ + + E + + +H
Sbjct: 493 FDISKRLGLGLKIINHAKSMIGQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIH 552
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
+L R E + R +++ D A Q +A + + K +
Sbjct: 553 NDLSRA----YEQYQNMESRLIEEAKD-----------KANQRVKAAMEEADDILKSLRD 597
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
+R + ++ + L ++ K IKQ+ + ++ +
Sbjct: 598 MRDQKGAEVKEHELIDQRKRLEDQYE-----------------AKSIKQNVQKQKWDEIK 640
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S+G+KG V++V S EE VVQ+G +K + +D+
Sbjct: 641 AGDEVKVLSYGQKGEVLEV-LSDEEAVVQMGIIKMKLPLSDL 681
>gi|374604257|ref|ZP_09677223.1| MutS2 family protein [Paenibacillus dendritiformis C454]
gi|374390142|gb|EHQ61498.1| MutS2 family protein [Paenibacillus dendritiformis C454]
Length = 785
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 110/580 (18%)
Query: 218 FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
+ G++ SG G+ IEP + V +N++L++ + + E +L LTE++ + D +E
Sbjct: 208 YGGIVHDQSGSGATLFIEPEAIVAMNNKLRETKLREEREIERILSRLTEQVGLLADVLEY 267
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ LD + A+A L ++MK SL ++R + + L K
Sbjct: 268 DTGAVETLDFMFAKAR-------------LAREMKASLPR--------MNDRGF-LKLRK 305
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ P++ QV
Sbjct: 306 ARHPLI-------------------------------------------PAD-QV----- 316
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL I + + +++ FD+
Sbjct: 317 ---VPIDVELGNSYTSILVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEDGSQMCVFDA 373
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
++ADIGDEQS+ QSLSTFS HL I I+ Q T +SLVLLDE+GAGT+P EG+AL +++L
Sbjct: 374 IYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAEGSALAIAIL 433
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A
Sbjct: 434 EHIHRLGCRM-VATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVGVPGRSNAFA 492
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
IAERLGLP ++ +AR E+ E + +E ++ +A + L
Sbjct: 493 IAERLGLPKPIIDHAR-------GEVTEEDMRVETMIASLEDNRLKAEAERETASKLRME 545
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L R+K+ Q + ++ A A AR++V K AR + +LR
Sbjct: 546 LEAMRQKLSRELEKQEAEREKRQEQAEAKARAIVDK-----------ARREAQEIIAELR 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
A + + +H+LT + +++ A + K + + V+R E G
Sbjct: 595 QLAMEGVQV-----KEHMLTEARK-----RLDEAAPEAKLAAKPKRDAKPVRRIE---AG 641
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V S +KG+V VE + EE VVQ+G MK + D+
Sbjct: 642 DDVRVYSLNQKGSV--VELAGEEAVVQLGIMKMKVPLDDL 679
>gi|256003347|ref|ZP_05428338.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|385778551|ref|YP_005687716.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|419723621|ref|ZP_14250736.1| MutS2 protein [Clostridium thermocellum AD2]
gi|419724554|ref|ZP_14251616.1| MutS2 protein [Clostridium thermocellum YS]
gi|255992637|gb|EEU02728.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|316940231|gb|ADU74265.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|380772101|gb|EIC05959.1| MutS2 protein [Clostridium thermocellum YS]
gi|380780303|gb|EIC09986.1| MutS2 protein [Clostridium thermocellum AD2]
Length = 793
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 216/392 (55%), Gaps = 32/392 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID +I LV+TGPNTGGKT+ LKTVGL +M ++GLHI ++E K+ F V+A
Sbjct: 318 VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I I+ SLVL DE+GAGT+P EG AL MS+LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVLFDELGAGTDPTEGAALAMSILEYL 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
GS T+ATTH+ +LK + F ENAC EF+ L+PTY++L GVPG+S+A I++
Sbjct: 438 RNKGS-TTVATTHYSQLKAYAVTTKFVENACCEFNVETLRPTYRLLIGVPGKSNAFAISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A++ + ++++ +E+ Q +A + + + L K L
Sbjct: 497 RLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEE 556
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+RK+ E+ R R +Q +A A AR ++ ++ ++ S+ R L
Sbjct: 557 QKRKLAEN----RERLIQ---EARAEARKILLEARKEAEEIISKMRRL------------ 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR---VKRTELPNVG 755
Q +H + K L ++ VD +E ++ +P+ VK E G
Sbjct: 598 EQEVHNAQRQKEAEELRLKLKR-KVDSIEETL--------ELPLAPKNALVKPPENLKPG 648
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
D V + + +KGT+I E+VVQ G MK
Sbjct: 649 DSVLIVNLDQKGTIITPPDKDGEVVVQAGIMK 680
>gi|72383421|ref|YP_292776.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
gi|72003271|gb|AAZ59073.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
Length = 804
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 231/807 (28%), Positives = 357/807 (44%), Gaps = 172/807 (21%)
Query: 43 DDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET-- 100
D KK++++ ESL +LEW +C +S+FA T GR+ + + + + S LL +T
Sbjct: 9 DSKKTQIISESLDLLEWPTVCSHLSTFALTQQGRKKC--ESFDLPRNLSLSQELLSQTLE 66
Query: 101 NAAIEMQKHGSCSLD-----------------LTGVDLSLVKSAIREVRRASPL------ 137
+++ + S D G DL V +R R+ L
Sbjct: 67 IGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTLRAARKLRKLIFDQVI 126
Query: 138 RP--NEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQML--------YQLMDML 187
RP +E L VA L LQ L + E + R P L Q D+L
Sbjct: 127 RPRLSELLKDVATL---PDLQKLLEFGLDEGGRIADRASPKLSELRRYRNSVRLQRKDIL 183
Query: 188 ---IRNENNESLFLEVSSIHGR--LCIRTG-ADQLSFKGLLLSSSGIGSVI--EPLSAVP 239
IR +S +GR L + G +DQ+ KG++ SS G+ I EP +
Sbjct: 184 QDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQI--KGMVHDSSASGNTIYVEPQVVIS 241
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
+ + L + + ++ E +L ++++ ++ I ++ ++Q++ +RA YS G
Sbjct: 242 IGNRLAKIDSEISDEERRLLADWSKEVGLNAIVIAHLVEILLQIEFALSRARYSKWLNGV 301
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDL-ES 358
P I ++ H P K HPLL+ W D E
Sbjct: 302 -PAILDQEE------HSPFEIK-------------DFRHPLLV----------WNDFYEK 331
Query: 359 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 418
NT VP +A +V+ ITGPN
Sbjct: 332 KNT------------------------------------VVPTSFDVAPDLKVVAITGPN 355
Query: 419 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 478
TGGKT+ LK++GLAV+MAK+GL + + ++PW +VFADIGDEQSL Q+LSTFSGH+
Sbjct: 356 TGGKTVALKSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHIL 415
Query: 479 QIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 535
+I I I +LVLLDE+GAGT+P EGTAL M+LL+ A LTIATTH G+L
Sbjct: 416 RISRILDAIDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRAR-LTIATTHFGQL 474
Query: 536 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 595
K LKYS+ FENA + FD ++PT+ + WG+PGRS+AI I++RLGL V+ +A++
Sbjct: 475 KALKYSDSRFENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN 534
Query: 596 AASAE-INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLL----RTRRKILEHCASQ 650
+ +N+VI +E+ + + +A L + LH+ LL + R++ E
Sbjct: 535 PERVDNVNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQG 594
Query: 651 RFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN 710
RF+ I + R L+ + Q S AR + +R +Q+
Sbjct: 595 RFKLESSIREGQKEVRHLIKRLRDQ-NASGETAR-IAGQRLRQIE--------------- 637
Query: 711 QHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE--LPNVGDLVHVSSFGKKGT 768
K + R+ T+ P +G+ V +SS GK G
Sbjct: 638 ---------------------------KGYRNDKRINHTQSWTPKIGEKVRLSSIGKAGE 670
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+I ++ V G + + T++
Sbjct: 671 IISFSDDGMQLTVLCGVFRSKVNLTEV 697
>gi|296133368|ref|YP_003640615.1| MutS2 family protein [Thermincola potens JR]
gi|296031946|gb|ADG82714.1| MutS2 family protein [Thermincola potens JR]
Length = 782
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 174/282 (61%), Gaps = 5/282 (1%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
H VPIDI++ R VLVITGPNTGGKT+ LKTVGL MA++GLHI ++VP F
Sbjct: 307 GHVVPIDIYLGRDFHVLVITGPNTGGKTVSLKTVGLTAAMAQAGLHIPCEPGSQVPVFHD 366
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+F DIGDEQS+ QSLSTFSGHLK I +I+++ +LVLLDE+GAGT+P+EG AL M++L
Sbjct: 367 IFVDIGDEQSIEQSLSTFSGHLKNIIHILAKVNESALVLLDELGAGTDPVEGAALAMAIL 426
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E + + T+ATTH+ ELK + ENA +EFD L+PTYK+L G PGRSSA
Sbjct: 427 EYLYQKKA-RTVATTHYSELKVFAFERQGVENASVEFDSKTLRPTYKLLIGQPGRSSAFE 485
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
IA RLGLP +V AR + ++ +++ E+E + + E E R L R L +
Sbjct: 486 IALRLGLPEALVTRARSFLTSEEIQVADLVEELETNRRKAEE---ERRKAERLRRELDE- 541
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ R LE ++R V+K + AA K A +L
Sbjct: 542 MRRDYAAKLEALENRRKELVEKAREEAASIVRQARKEADELV 583
>gi|333904393|ref|YP_004478264.1| DNA mismatch repair protein [Streptococcus parauberis KCTC 11537]
gi|333119658|gb|AEF24592.1| DNA mismatch repair protein [Streptococcus parauberis KCTC 11537]
Length = 778
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 233/402 (57%), Gaps = 47/402 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PVP D+ ++ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ +K+ F+
Sbjct: 307 LQKPVPNDLHFSKDLTVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADYGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ Q+T+ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVSILDQATADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK ++F ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEEL-RLKEIKTMATTHYPELKAYGIESEFVENASMEFDSNSLQPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V +A Q + +++N +I E+ ++Q LE H + + NL
Sbjct: 486 EIARRLGLASHIVTDA-QNFTDTDSDVNRII---EKLESQTLESRKRLEHIKEVEQDNLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHK--R 690
N R +K+ + +R ++++K++ K AQ++ A +++ S++ K
Sbjct: 542 FN--RAVKKLYNEFSHERDKEMEKVT-----------KEAQEIVDLALAESESILAKLHD 588
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q L QT + K + V+K + K+
Sbjct: 589 KSQLKP------HEVIEAKTQ--LKKLVPQTDLSK--------NKVLK------QAKKLR 626
Query: 751 LPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
VGD + VS++G++GT+I +++ K E QVG +K +K
Sbjct: 627 AARVGDDIIVSAYGQRGTLINQLKDQKWE--AQVGLIKMTLK 666
>gi|329116617|ref|ZP_08245334.1| MutS2 family protein [Streptococcus parauberis NCFD 2020]
gi|326907022|gb|EGE53936.1| MutS2 family protein [Streptococcus parauberis NCFD 2020]
Length = 778
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 233/402 (57%), Gaps = 47/402 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PVP D+ ++ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ +K+ F+
Sbjct: 307 LQKPVPNDLHFSKDLTVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADYGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ Q+T+ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVSILDQATADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK ++F ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEEL-RLKEIKTMATTHYPELKAYGIESEFVENASMEFDSNSLQPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V +A Q + +++N +I E+ ++Q LE H + + NL
Sbjct: 486 EIARRLGLASHIVTDA-QNFTDTDSDVNRII---EKLESQTLESRKRLEHIKEVEQDNLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHK--R 690
N R +K+ + +R ++++K++ K AQ++ A +++ S++ K
Sbjct: 542 FN--RAVKKLYNEFSHERDKEMEKVT-----------KEAQEIVDLALAESESILAKLHD 588
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q L QT + K + V+K + K+
Sbjct: 589 KSQLKP------HEVIEAKTQ--LKKLVPQTDLSK--------NKVLK------QAKKLR 626
Query: 751 LPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
VGD + VS++G++GT+I +++ K E QVG +K +K
Sbjct: 627 AARVGDDIIVSAYGQRGTLINQLKDQKWE--AQVGLIKMTLK 666
>gi|398818390|ref|ZP_10576981.1| MutS2 family protein [Brevibacillus sp. BC25]
gi|398027832|gb|EJL21362.1| MutS2 family protein [Brevibacillus sp. BC25]
Length = 785
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 203/679 (29%), Positives = 326/679 (48%), Gaps = 132/679 (19%)
Query: 136 PLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY----IRFMPLTQMLYQL-------M 184
PL EA + L + L+ +R I E+ D+ + + Q + QL +
Sbjct: 116 PLLQQEAERIEGLRE----LETEIRRCIDENGDILDSASLELRQVRQEIRQLESRIREKL 171
Query: 185 DMLIRNENNESLFLE-VSSIHG-RLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVP 239
D + R+ + + +E + +I G R I + S G ++ S+SG IEP V
Sbjct: 172 DQMTRSSTYQKMLMENIVTIRGDRFVIPVKQEYRSVFGGIVHDQSASGATLFIEPEVIVE 231
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
+N++L++ R + E +L LTE++ ++ + + + +LD + A+A + S
Sbjct: 232 MNNKLRELRLREEREVERILYVLTEQVSFAVEALIENTEALTELDFMFAKAQLAWSMKAI 291
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 359
P I ++R + + + KA HPL+
Sbjct: 292 CPRI---------------------NDRGY-VNMRKARHPLI------------------ 311
Query: 360 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 419
P E+ V P+D+ + + + +V+TGPNT
Sbjct: 312 -------------------------PREVVV---------PVDVELGGEYQAIVVTGPNT 337
Query: 420 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 479
GGKT+ LKT+GL +M +GLHI + E +++ F S+FADIGDEQS+ QSLSTFS H+
Sbjct: 338 GGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTN 397
Query: 480 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 539
I I+++ +SLVL DE+GAGT+P EG AL MS+++ +SG+ L +ATTH+ ELK
Sbjct: 398 IIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSELKAYA 456
Query: 540 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 599
Y NA +EFD L+PTY++L GVPGRS+A IA RLGLP ++ AR G+ S
Sbjct: 457 YDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR---GSISE 513
Query: 600 EINEV---IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ 656
E N+V I +ER + A+ +R + L R + A ++ ++++
Sbjct: 514 EDNQVESMIASLERNRKSAEADSLAAKA----ARQEAEELRRQLEEERAQFAEEKNKRME 569
Query: 657 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 716
+ D A IA L + A+ + R L A+ + + + K L +
Sbjct: 570 RAEDEARIAVQLAKEEAETII------RELREMMAEGMEIKEHRLIDAKK------RLGN 617
Query: 717 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSK 776
+ +KV+ PA A V+ T++ VGD V V+SFG+KGTV++ + +
Sbjct: 618 AVLELEKEKVKKPAKA-------------VRATQI-KVGDEVMVTSFGQKGTVLE-KVNN 662
Query: 777 EEIVVQVGNMKWIMKFTDI 795
EE +VQ+G MK +K D+
Sbjct: 663 EEFLVQIGIMKMKVKRDDM 681
>gi|312793836|ref|YP_004026759.1| muts2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180976|gb|ADQ41146.1| MutS2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 786
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 287/594 (48%), Gaps = 131/594 (22%)
Query: 217 SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S KG++ S GS +EP V ++++++ AR+ + E +L L++ + +EI+
Sbjct: 203 SIKGIIHDQSATGSTLFVEPFVCVEISNQIRVARSEEKEEIERILQELSQLISDSYNEIK 262
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + +LD++ +A ++ F + +P+ + I L
Sbjct: 263 QNFESLSELDILFTKARWAHQFRAS----------------KPILNTAG------YINLK 300
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL+ K+K
Sbjct: 301 KARHPLI---EKEKV--------------------------------------------- 312
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
VPID+ + ++ VLVITGPNTGGKT+ LKT+GL ++A+SG+ + + E ++V F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+K I I + S +LVLLDEIG+GT+P EG AL ++
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + GS + +ATTH+GELKT + FENA EFD LKPTY++L G+PG S+A+
Sbjct: 429 LKFLFKKGSKV-VATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNAL 487
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ LGL +V+ A+ + E+ ++I EMER + + E + A + + NL K
Sbjct: 488 YISSNLGLKEEIVELAKSYMSKKTLELTDIINEMERKRKELEETLENANKLKIEAENLKK 547
Query: 635 NL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
L +++I E + + VQ++ D V
Sbjct: 548 TLEEERRRFEAEKQRIKERASREAREFVQRVEDE-------------------------V 582
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
K ++LR A +SL ++ + ++E ++VK I+Q+ + +
Sbjct: 583 EKLFKELRKIA-ESLK---------------EKEMLKQLEEKKREYENLVKSIEQASQKE 626
Query: 748 ---RTELPN---VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++LP +G V+V SF +G V + SK + V++G MK + +D+
Sbjct: 627 EKLQSKLPENLRLGQKVYVKSFDAEGFVESLPDSKGNLTVRIGIMKLSVNISDV 680
>gi|222153669|ref|YP_002562846.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766604|sp|B9DVK7.1|MUTS2_STRU0 RecName: Full=MutS2 protein
gi|222114482|emb|CAR43343.1| putative DNA mismatch repair protein [Streptococcus uberis 0140J]
Length = 777
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 232/401 (57%), Gaps = 45/401 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ A V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ E +K+ FD
Sbjct: 307 LKNPVANDLHFADDLAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFD 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ QSLSTFS H+ I +I+ +S S SLVL DE+GAGT+P EG +L M++
Sbjct: 367 AIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNSNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK +D+ ENA MEFD LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER---FKTQFLEHVHEARHFLMLSRN 631
IA RLGL +V+ A Q+ S ++N +I E+ER + L+H+ E N
Sbjct: 486 EIARRLGLAETIVKEAEQMTDTDS-DVNRIIEELERQTLSSRRRLDHIREVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+ N R +K+ + + ++++K S A L ++++ S +H++A
Sbjct: 540 IKFN--RAVKKLYNEFSLAKDKEIEKASQEAQAIVELALTESEEIL-------SKLHEKA 590
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
+L+P H K++ ++ V + + K +++
Sbjct: 591 -ELKP------HEIIEAKSK-------LKSLVPQRDLSKNKVLKKAKKLRE--------- 627
Query: 752 PNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
P +GD + VS++G++GT+I +V+ +K E QVG +K +K
Sbjct: 628 PRIGDDIIVSAYGQRGTLIGQVKGNKWE--AQVGLIKMTLK 666
>gi|304440485|ref|ZP_07400372.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370963|gb|EFM24582.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 786
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 212/792 (26%), Positives = 375/792 (47%), Gaps = 161/792 (20%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQT-YQDSLRLLDETNAAIEMQ---- 107
+++ LE+DK+ ++ + + LGRE + SI++T + L+ DE I+ +
Sbjct: 6 AIKTLEFDKILENLKTKCESDLGREVADSTDISISETEINNRLKETDEAVDIIDKKGTPP 65
Query: 108 -------KHGSCSLDLTGV----------DL----SLVKSAIREVRRASPLRPNEALAVV 146
K + LDL G D L+K I E + +E + +
Sbjct: 66 LFGIHDIKEATARLDLGGTLGARSLLNVADFLRVSRLLKKYIEE--EDDEGKSHEIIEDM 123
Query: 147 ALLQF-SETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNE----------NNES 195
A L F S+ ++ + I + ++ P + + + ++ ++N+ N+ S
Sbjct: 124 ASLLFTSKQIEDRISECIISEEEISDSASPKLRQIRR--NIFVKNKQIREKLDSIVNSGS 181
Query: 196 LFLE---VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARA 249
+L+ V+ GR I ++ + KGL+ +S++G + IEP++ V LN+EL+
Sbjct: 182 KYLQDNIVTMREGRYVIPVKSENKNKIKGLVHDMSATGQTAYIEPIAVVNLNNELKTLEI 241
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
+ E +L L+ + +I+ + + +LD + A+A + T P I
Sbjct: 242 EEREEIERILAELSAYVADYSLQIKGNQDILSRLDFIFAKAKLAFEMEATKPKI------ 295
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
+ ++ L KA HPLL
Sbjct: 296 ----------------NNDLSLKLYKARHPLL---------------------------- 311
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
+K E VPIDI + ++ L+ITGPNTGGKT+ LKTV
Sbjct: 312 -----KKNE-------------------VVPIDISLGKEFTSLIITGPNTGGKTVTLKTV 347
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GL +MA+ GL I + E ++V FD +F+DIGDEQS+ QSLSTFS H+ I NI+ +
Sbjct: 348 GLLNIMAQYGLFIPAEEGSQVGIFDKIFSDIGDEQSIEQSLSTFSSHMVNIVNILENADE 407
Query: 490 QSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENAC 549
+SLVL DE+GAGT+P EG AL S+++ E + I+TTH+ +LKT + + +NA
Sbjct: 408 RSLVLFDELGAGTDPTEGAALARSIMDFMLER-KIRCISTTHYNQLKTYALTTEGVQNAS 466
Query: 550 MEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
MEFD L+PTY+++ G+PG+S+A I++RLGL ++++A++ S E +V+ +E
Sbjct: 467 MEFDVDTLRPTYRLIIGIPGKSNAFLISKRLGLRDDIIEDAKKQMSQDSIEFEKVLENIE 526
Query: 610 RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLV 669
+ + + +H EA + + +L + +++ E AS + ++ + A AR ++
Sbjct: 527 KDRWEIEKHRSEAELYKI-------DLEKQNKRLEEELASMKEKREDILEKARREARQII 579
Query: 670 HKSAQQLCPSASQARSLVHK--RAQQLRPSASQSL---HCTKVGKNQHVLTSNFQQTTVD 724
+++ ++ + S+ + +V + + Q R SQ L + K K +L ++
Sbjct: 580 NRAKEESELALSEIKDVVSEVSKDQARRLQESQDLIRENLNKASKKDKIL--------IE 631
Query: 725 KVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVG 784
V++PA ++IK G+ V ++S KGTV+++ S +++VQ G
Sbjct: 632 AVKNPA-------ENIKP------------GETVMIASLNAKGTVLELPDSNGDVLVQAG 672
Query: 785 NMKWIMKFTDIV 796
MK +K I+
Sbjct: 673 MMKMKVKKEAII 684
>gi|78185392|ref|YP_377827.1| MutS 2 protein [Synechococcus sp. CC9902]
gi|78169686|gb|ABB26783.1| MutS 2 protein [Synechococcus sp. CC9902]
Length = 814
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 210/614 (34%), Positives = 305/614 (49%), Gaps = 126/614 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGRE-ATLTQLWSINQTYQDSLRLLDET--NAAIEMQK 108
E+L +LEW +C +++FA T +G E A TQL Q+ ++L+ ET A ++
Sbjct: 26 ETLELLEWPVVCEHLATFASTRMGLESARATQL---PQSLAETLQRQAETVEMAVLDDLT 82
Query: 109 HGSCSL----DLTGVDLSLVKSAI----------------REVRRA---SPLRPNEALAV 145
G S DL V L +K + R++RR LRP A+
Sbjct: 83 EGGLSFRGVNDLRPVLLRCLKGGVASGEELLAVAGTLAAARKLRRQIDDQELRPV-CTAL 141
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESL--------- 196
+ + L+ L+ +++E + R P L Q + +R E + L
Sbjct: 142 IETMVTLPDLEQRLKFSLEEGGRVADRASPPLAGLRQQWNG-VRQERRDKLQELTRRYAS 200
Query: 197 FLEVSSI---HGR--LCIRTGA-DQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARAS 250
FL+ S I HGR L ++ GA Q+S + S+SG IEP S + + ++L A
Sbjct: 201 FLQDSVIAQRHGRPVLAVKAGAVGQVSGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEAR 260
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNA----RATYSLSFGGTSPNIFLP 306
+ K E+ VL L++ + D E++LN ++++ + R Y G P++
Sbjct: 261 IRKEEQRVLAELSDLVAQD----ERVLNSLVEILLALDLALARGRYGRWLGAVPPHLL-- 314
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
+P E L HPLL+ QHK+ +
Sbjct: 315 --------EDP----------EAPFLLRDLRHPLLIWQHKRSSG---------------- 340
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
SP VPI + ++ + RV+ ITGPNTGGKT+ L
Sbjct: 341 -----------------SPV------------VPISVDVSAQLRVVAITGPNTGGKTVSL 371
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
K++GL +MA++G+ I S +PW V ADIGDEQSL QSLSTFSGH+K+IG I+
Sbjct: 372 KSLGLVALMARAGMLIPCSGRPSLPWCAQVLADIGDEQSLQQSLSTFSGHIKRIGRILQA 431
Query: 487 STS---QSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
S +LVLLDE+GAGT+P EGTAL +LL+A A+ + LTIATTH GELK LKY++D
Sbjct: 432 LESGPVPALVLLDEVGAGTDPSEGTALATALLKALADR-ARLTIATTHFGELKALKYTDD 490
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGAASAEIN 602
FENA + F+ L PTY++LWG+PGRS+A+ IA RLGL G++ Q L AA E+N
Sbjct: 491 RFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQAQALLALAAEGEVN 550
Query: 603 EVI--IEMERFKTQ 614
VI +E +R + Q
Sbjct: 551 TVIQGLEEQRQRQQ 564
>gi|124025008|ref|YP_001014124.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. NATL1A]
gi|123960076|gb|ABM74859.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. NATL1A]
Length = 804
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 230/808 (28%), Positives = 359/808 (44%), Gaps = 174/808 (21%)
Query: 43 DDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET-- 100
D KK++++ ESL +LEW +C +S+FA T GR+ + + + + S LL +T
Sbjct: 9 DSKKAQIISESLDLLEWPTVCSHLSTFALTQQGRKKC--ESFDLPRNLSLSQELLSQTLE 66
Query: 101 NAAIEMQKHGSCSLD-----------------LTGVDLSLVKSAIREVRRASPL------ 137
+++ + S D G DL V +R R+ L
Sbjct: 67 IGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTLRAARKLRKLIFDQVI 126
Query: 138 RP--NEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQML--------YQLMDML 187
RP +E L VA L LQ L + E + R P L Q D+L
Sbjct: 127 RPRLSELLKDVATL---PDLQKLLEFGLDEGGRIADRASPKLSELRRYRNSVRLQRKDIL 183
Query: 188 ---IRNENNESLFLEVSSIHGR--LCIRTG-ADQLSFKGLLLSSSGIGSVI--EPLSAVP 239
IR +S +GR L + G +DQ+ KG++ SS G+ I EP +
Sbjct: 184 QDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQI--KGMVHDSSASGNTIYVEPQVVIS 241
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
+ + L + + ++ E +L ++++ ++ I ++ ++Q++ +RA YS G
Sbjct: 242 IGNRLAKIDSEISDEERRLLADWSKEVGLNAIVIAHLVEILLQIEFALSRARYSKWLNGV 301
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAY-HPLLLQQHKQKTQQAWKDL-E 357
P I + E +++ K + HPLL+ W D E
Sbjct: 302 -PAIL--------------------DQEEHSLFEIKDFRHPLLV----------WNDFHE 330
Query: 358 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 417
NT VP +A +V+ ITGP
Sbjct: 331 KKNT------------------------------------VVPTSFDVAPDLKVVAITGP 354
Query: 418 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 477
NTGGKT+ LK++GLAV+MAK+GL + + ++PW +VFADIGDEQSL Q+LSTFSGH+
Sbjct: 355 NTGGKTVALKSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHI 414
Query: 478 KQIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 534
+I I I +LVLLDE+GAGT+P EGTAL M+LL+ A LTIATTH G+
Sbjct: 415 LRISRILDAIDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRAR-LTIATTHFGQ 473
Query: 535 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 594
LK LKYS+ FENA + FD ++PT+ + WG+PGRS+AI I++RLGL V+ +A++
Sbjct: 474 LKALKYSDSRFENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFI 533
Query: 595 GAASAE-INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLL----RTRRKILEHCAS 649
+ +N+VI +E+ + + +A L + LH+ LL + R++ E
Sbjct: 534 NPERVDNVNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQ 593
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
RF+ I + R L+ + Q S AR + +R +Q+
Sbjct: 594 GRFKLESSIREGQKEVRHLIKRLRDQ-NASGETAR-IAGQRLRQIE-------------- 637
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE--LPNVGDLVHVSSFGKKG 767
K + R+ T+ P +G+ V +SS GK G
Sbjct: 638 ----------------------------KGYRNDKRINHTQSWTPKIGEKVRLSSIGKAG 669
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+I ++ V G + + T++
Sbjct: 670 EIISFSDDGMQLTVLCGVFRSKVNLTEV 697
>gi|300856601|ref|YP_003781585.1| DNA mismatch repair MutS-like protein [Clostridium ljungdahlii DSM
13528]
gi|300436716|gb|ADK16483.1| DNA mismatch repair MutS related protein [Clostridium ljungdahlii
DSM 13528]
Length = 786
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 225/413 (54%), Gaps = 36/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V+ +E HP VP+D++I R LVITGPNTGGKT+ LKT+GL +MA SGL I
Sbjct: 299 VNIIEGRHPLINKKTVVPMDVYIGRNFSCLVITGPNTGGKTVTLKTIGLLHIMALSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + V +F VFADIGDEQS+ Q+LSTFS H+ I NII +SLVL DE+GAGT
Sbjct: 359 PARENSTVGFFTEVFADIGDEQSIEQNLSTFSSHMTNIVNIIENFDEKSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G + +ATTH+ ELK N+ ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAVSILENLRKRGCTI-VATTHYSELKVYALKNEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
++ GVPG+S+A I++RLGLP ++++AR+ + + + ++I ++ K++ EA
Sbjct: 478 LMIGVPGKSNAFEISKRLGLPEFIIEDARENIASDALQFEDLIQSLQEKKSKAETFAREA 537
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+L++ ++ ++ K+Q I D A I + A+++ ++ +
Sbjct: 538 E------------ILKSEAAKIKEKYEEKASKLQNIRDKAIIG---AQREAKEIIRNSKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K ++L S K+ +N+ L ++T +K+ +K +K+
Sbjct: 583 EADKILKDMRELERMGYTSSVRHKLEENRKKLKDRLEKTE-EKLYDNKNDVGEELKSVKE 641
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G V + S +K V+ SK E+ VQ G MK +K ++
Sbjct: 642 ------------GQEVFIPSLNQKAVVLSKPDSKGEVQVQAGIMKISVKLKEL 682
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 52/297 (17%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
+SL+VLE+ K+ + +A T ++ + +L + Y+ L + A + G+
Sbjct: 4 KSLKVLEFYKVKERLKDYANTGAAKD-LIEKLSPYDNLYEVREHLQETREALKLLVTKGN 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKED----- 166
+ GV V+ I+ + S L P + L + A+L+ + +Q + + E+
Sbjct: 63 PPFE--GV--YDVRQGIKMAGKGSTLMPGQILKIGAILRAARRIQKYITVSEDEEHFKII 118
Query: 167 ADLYIRFMPLTQMLYQLMDMLIRNENN-------------ESLFLEVSSIHGRL--CIRT 211
D+ +PL + ++ + I +E+ +SL + +S+ R+ IR+
Sbjct: 119 EDICAGIVPLKNLEDEIF-IAIESEDEISDKASSLLYNIRKSLKDKNASVRDRVNSLIRS 177
Query: 212 GADQL----------------------SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
+D L S GL+ SSSG IEP+ V LN+E+++
Sbjct: 178 YSDYLQDNLYTMRGDRYVLPVKAENKSSVPGLVHDQSSSGATLYIEPMGLVNLNNEIKEL 237
Query: 248 RASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ KAE D +LA L++++ ++ +E+ + I +LD + A+A + G PN+
Sbjct: 238 KLK-EKAEIDRILAELSQQIYDNITVVERDADIIWELDFIFAKAKFGNELNGNIPNV 293
>gi|345017977|ref|YP_004820330.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033320|gb|AEM79046.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 791
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 291/624 (46%), Gaps = 139/624 (22%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGS 111
+++ LE+DK+ + + + LG++ I + ++ R LD N AI + +G
Sbjct: 9 AIKSLEFDKIVEFIVGYCDSDLGKQKASN--IVIKKDIEEIERELDLLNEAISFISSYGG 66
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
S + + I++ + S L E L + L ++ + +++D ++
Sbjct: 67 ISFAFEDI-----RDYIKKAQIDSVLYNQELLKIKKFLNLVSQIKGYFKNL--QESDRFV 119
Query: 172 RFMPLTQMLYQLMDMLIRNEN--------------------------NESLFLEVSSI-- 203
R + + + D+ R EN NE + ++SI
Sbjct: 120 RLKEYDKKVLPIKDLEKRIENIIISEDEIADDASPMLKSLRRQKSSINEKIRATLNSIIS 179
Query: 204 --------------HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
GR + + S FKG++ SSSG IEP+ V LN+EL+Q
Sbjct: 180 TRQKELQEPIITVRQGRYVVPVKQEYRSTFKGIVHDQSSSGATLFIEPMQVVDLNNELRQ 239
Query: 247 ARASVTKAEEDVLLALTEKM----QVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
+ + +LL L++++ Q+ D+IE + + LD + A+A YSL P
Sbjct: 240 VELKERQEIQRILLELSQEVKKYSQILFDDIEIVSD----LDFIFAKAKYSLKLKAVRPE 295
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
+ ++ + I L KA HPL+ Q
Sbjct: 296 L-------NTMGY---------------INLKKARHPLINQ------------------- 314
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
E+ P+ DI+I + LVITGPNTGGK
Sbjct: 315 -------------------------------EVIVPI--DIYIGDQFNTLVITGPNTGGK 341
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKTVGL +MA +GL+I + E ++V F+ VF DIGDEQS+ QSLSTFS H+ I +
Sbjct: 342 TVTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+GAGT+P+EG AL MS+L+ + G+ TIATTH+ ELK
Sbjct: 402 ILQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGA-KTIATTHYSELKQYALKA 460
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
ENA +EFD LKPTYK++ G+PG+S+A I++RLGLP +++NAR+ + +
Sbjct: 461 PGVENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE 520
Query: 603 EVIIEMERFKTQFLEHVHEARHFL 626
++I ++E K + LE ++ FL
Sbjct: 521 DIIADVES-KRRELEKANQEIAFL 543
>gi|253579597|ref|ZP_04856866.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849098|gb|EES77059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 793
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 274/601 (45%), Gaps = 117/601 (19%)
Query: 204 HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLL 260
+GR CI A+ + G++ S GS IEP++ V LN+++++ K E +L
Sbjct: 192 NGRYCIPVKAEYKGQVPGMVHDQSSTGSTLFIEPMAIVKLNNDIRELELEEQKEIEVILS 251
Query: 261 ALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
L+++ D I LN ++QLDV+ ARA+ ++ T P IF
Sbjct: 252 TLSQQTAEQTDSIRADLNIMVQLDVIFARASLAMDMNATEP-IF---------------- 294
Query: 321 KVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
E I L +A HPL
Sbjct: 295 -----NDEGRIRLKQARHPL---------------------------------------- 309
Query: 381 TNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
++ VPIDI + +LVITGPNTGGKT+ LKTVGL +M +SGL
Sbjct: 310 ------------IDKKKAVPIDIRLGDDFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGL 357
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + + +++ F+ V+ADIGDEQS+ QSLSTFS H+ + + + ++ SLVL DE+GA
Sbjct: 358 HIPTLDRSELALFEEVYADIGDEQSIEQSLSTFSSHMTNVVSFLKKANRHSLVLFDELGA 417
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL +++L E G + T+ATTH+ ELK S ENAC EFD L+PT
Sbjct: 418 GTDPTEGAALAIAILSHLHEQG-IRTMATTHYSELKVYALSTSGVENACCEFDVETLRPT 476
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L GVPG+S+A I+ +LGLP ++ A++ +V+ +E +
Sbjct: 477 YRLLIGVPGKSNAFAISSKLGLPDYIIDKAKEQISEQDESFEDVLSSLESSRITIENERR 536
Query: 621 EARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
E + +L + + K+ E QR R +++ ++ A + A Q
Sbjct: 537 EIEQYKQEIASLKSEMESKQEKLNE----QRDRIIRQANEEAHAVLREAKEYADQTMKMF 592
Query: 681 SQAR------SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS 734
+ + S V K Q LR H K K Q+T K + TA
Sbjct: 593 HKFQKDHVDLSAVEKERQNLRK------HMNKAEKGM------TQKTAAKKPKKELTA-- 638
Query: 735 SVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
KDI ++GD V V S KGTV +K + VQ+G ++ + +D
Sbjct: 639 ---KDI------------SLGDAVKVLSMNLKGTVSSRPDNKGFLFVQMGIIRSKVHISD 683
Query: 795 I 795
+
Sbjct: 684 L 684
>gi|402838646|ref|ZP_10887149.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
gi|402272206|gb|EJU21427.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
Length = 785
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 282/582 (48%), Gaps = 105/582 (18%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ SSSG IEP++ V +N+ L + K E +L LT + ++I
Sbjct: 205 FPGIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCEDISH 264
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ + QLD + A+ S+ P I ++R++ I L
Sbjct: 265 NCDILEQLDFIMAKGKLSVEMNAIEPKI---------------------NDRKY-IKLIN 302
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ EKD +S +
Sbjct: 303 ARHPLI------------------------------------EKDKVVSST--------- 317
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
I + + L+ITGPNTGGKT+ LKT+GL +M ++GLHI + + FD+
Sbjct: 318 -------IILGGEYSTLIITGPNTGGKTVTLKTLGLCSLMFQAGLHIPCDLESTICIFDN 370
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGDEQS+ QSLSTFS H+ I I+ + SLVL DE+GAGT+P+EG L +S+L
Sbjct: 371 VFADIGDEQSIQQSLSTFSAHMTNIVYIMDNVGNNSLVLFDELGAGTDPIEGAGLAVSIL 430
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E +S ++LT+ATTH+ ELK + + NA +EFD L PTYK+L GVPG+S+A
Sbjct: 431 ETL-KSKNILTVATTHYSELKNYALTQENVTNASVEFDINTLSPTYKLLIGVPGKSNAFE 489
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+++LGL ++ +A++ S ++ +VI ++E+ +T + + E + L ++
Sbjct: 490 ISKKLGLSEEIINSAKEHIKTDSIQMEDVISKLEKIRTDYEKKQEELQKEL-------ED 542
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ R K+ Q+ + + I DA AR L+ A ++ K +++
Sbjct: 543 VKYIRLKLENKEQRQKEQNKKLIEDAKEKARKLIE--------DAKSEADIISKNLNKIK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
S+ + + + L +N + E A + ++ + K E NVG
Sbjct: 595 NSSDYK----NIDRQMNELKTNINKYK----EKYAKSKEELI-----AKSSKPLENINVG 641
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVT 797
D+V+V+SF K V+ V+ +K+E+++++G +K +K ++ T
Sbjct: 642 DIVYVNSFAKNAKVLSVDDAKDEVLIELGAIKMTVKKENLST 683
>gi|363892244|ref|ZP_09319412.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
gi|361964194|gb|EHL17238.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
Length = 785
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 282/582 (48%), Gaps = 105/582 (18%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ SSSG IEP++ V +N+ L + K E +L LT + ++I
Sbjct: 205 FPGIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCEDISH 264
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ + QLD + A+ S+ P I ++R++ I L
Sbjct: 265 NCDILEQLDFIMAKGKLSVEMNAIEPKI---------------------NDRKY-IKLIN 302
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ EKD +S +
Sbjct: 303 ARHPLI------------------------------------EKDKVVSST--------- 317
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
I + + L+ITGPNTGGKT+ LKT+GL +M ++GLHI + + FD+
Sbjct: 318 -------IILGGEYSTLIITGPNTGGKTVTLKTLGLCSLMFQAGLHIPCDLESTICIFDN 370
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGDEQS+ QSLSTFS H+ I I+ + SLVL DE+GAGT+P+EG L +S+L
Sbjct: 371 VFADIGDEQSIQQSLSTFSAHMTNIVYIMDNVGNNSLVLFDELGAGTDPIEGAGLAVSIL 430
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E +S ++LT+ATTH+ ELK + + NA +EFD L PTYK+L GVPG+S+A
Sbjct: 431 ETL-KSKNILTVATTHYSELKNYALTQENVTNASVEFDINTLSPTYKLLIGVPGKSNAFE 489
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+++LGL ++ +A++ S ++ +VI ++E+ +T + + E + L ++
Sbjct: 490 ISKKLGLSEEIINSAKEHIKTDSIQMEDVISKLEKIRTDYEKKQEELQKEL-------ED 542
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ R K+ Q+ + + I DA AR L+ A ++ K +++
Sbjct: 543 VKYIRLKLENKEQRQKEQNKKLIEDAKEKARKLIE--------DAKSEADIISKNLNKIK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
S+ + + + L +N + E A + ++ + K E NVG
Sbjct: 595 NSSDYK----NIDRQMNELKTNINKYK----EKYAKSKEELI-----AKSSKPLENINVG 641
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVT 797
D+V+V+SF K V+ V+ +K+E+++++G +K +K ++ T
Sbjct: 642 DIVYVNSFAKNAKVLSVDDAKDEVLIELGAIKMTVKKENLST 683
>gi|302389949|ref|YP_003825770.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
gi|302200577|gb|ADL08147.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
Length = 790
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 229/414 (55%), Gaps = 50/414 (12%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VPIDI++ + VLVITGPNTGGKT+ LKTVGL +MA++GLH+ + E ++
Sbjct: 307 HPLLRGEVVPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALMAQAGLHLPAEEGTEL 366
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
F+ VFADIGDEQS+ QSLSTFS H+K I +I+ ++ S+SLVLLDE+GAGT+P EG AL
Sbjct: 367 SVFNEVFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLLDELGAGTDPTEGAAL 426
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M++L+ F E G+ + +ATTH+ ELK YS + ENA +EFD L PTY++ G+PG+
Sbjct: 427 AMAILDYFCEKGTRV-VATTHYSELKAFAYSMERMENASVEFDVETLSPTYRLTIGIPGK 485
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQFLEHVHEARHFLML 628
S+A IA+RLGL +++ AR + ++ +++ +E ER + +
Sbjct: 486 SNAFEIAKRLGLKREIIELARSFLNRENIQLEDLLKGLEQERERAK-------------- 531
Query: 629 SRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
R + +I E Q +++++ D L ++ + L + +ARS++
Sbjct: 532 ---------REKEEIQE-LKKQYMMRLKELEDE---KEKLRNREEKILAKAREKARSIIE 578
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
K + A + L K + Q T + +++V +S + P +K+
Sbjct: 579 K----VNKEAEKILERLKEVEAQD--TRQVRDRIIEEVRRRLKKASDDYS--PKEPLIKK 630
Query: 749 TELP------NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
N GD V V S ++G ++ V+ ++ VQ+G MK + + +V
Sbjct: 631 AGAKVVAGPINPGDKVRVESLNQEGYIVSVDEREKTAQVQIGIMKVNLPLSSLV 684
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EP+ + +N+EL++ K E +L +EK+ + + +E G+++L
Sbjct: 215 SASGATLYLEPMPVLQINNELRRLEIEEQKEMEQILREFSEKIAENREYLEVTFEGLVRL 274
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A YS+ G P +
Sbjct: 275 DFILAKAKYSMDIKGVEPGL 294
>gi|363893691|ref|ZP_09320786.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
gi|361963493|gb|EHL16565.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
Length = 785
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 282/582 (48%), Gaps = 105/582 (18%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ SSSG IEP++ V +N+ L + K E +L LT + ++I
Sbjct: 205 FPGIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCEDISH 264
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ + QLD + A+ S+ P I ++R++ I L
Sbjct: 265 NCDILEQLDFIMAKGKLSVEMNAIEPKI---------------------NDRKY-IKLIN 302
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ EKD +S +
Sbjct: 303 ARHPLI------------------------------------EKDKVVSST--------- 317
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
I + + L+ITGPNTGGKT+ LKT+GL +M ++GLHI + + FD+
Sbjct: 318 -------IILGGEYSTLIITGPNTGGKTVTLKTLGLCSLMFQAGLHIPCDLESTICIFDN 370
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGDEQS+ QSLSTFS H+ I I+ + SLVL DE+GAGT+P+EG L +S+L
Sbjct: 371 VFADIGDEQSIQQSLSTFSAHMTNIVYIMDNVGNNSLVLFDELGAGTDPIEGAGLAVSIL 430
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E +S ++LT+ATTH+ ELK + + NA +EFD L PTYK+L GVPG+S+A
Sbjct: 431 EKL-KSKNILTVATTHYSELKNYALTQENVTNASVEFDINTLSPTYKLLIGVPGKSNAFE 489
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+++LGL ++ +A++ S ++ +VI ++E+ +T + + E + L ++
Sbjct: 490 ISKKLGLSEEIINSAKEHIKTDSIQMEDVISKLEKIRTDYEKKQEELQKEL-------ED 542
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ R K+ Q+ + + I DA AR L+ A ++ K +++
Sbjct: 543 VKYIRLKLENKEQRQKEQNKKLIEDAKEKARKLIE--------DAKSEADIISKNLNKIK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
S+ + + + L +N + E A + ++ + K E NVG
Sbjct: 595 NSSDYK----NIDRQMNELKTNINKYK----EKYAKSKEELI-----AKSSKPLENINVG 641
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVT 797
D+V+V+SF K V+ V+ +K+E+++++G +K +K ++ T
Sbjct: 642 DIVYVNSFAKNAKVLSVDDAKDEVLIELGAIKMTVKKENLST 683
>gi|291533994|emb|CBL07107.1| Mismatch repair ATPase (MutS family) [Megamonas hypermegale
ART12/1]
Length = 611
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 215/437 (49%), Gaps = 86/437 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP+S V LN++++Q + E +L ++EK+ + D + + QL
Sbjct: 213 SSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQL 272
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D A+A + T P I E + L KA HPLL
Sbjct: 273 DFAFAKAKLARKMHATMPEI----------------------NDEGIVNLAKARHPLL-- 308
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
KD + VPIDI
Sbjct: 309 ----------------------------------NKD----------------NVVPIDI 318
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ R L+ITGPNTGGKT+ +KT+GL V+M +SGL I +K+ F +V+ADIGDE
Sbjct: 319 RLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDE 378
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H++ I NI++ L+LLDE+G+GT+P EG AL MS+LE E G+
Sbjct: 379 QSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMEIGA 438
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
T+ATTH+ ELKT YS + ENAC+EFD L+PTY++L G PG S+A I++RLGL
Sbjct: 439 -CTVATTHYNELKTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLS 497
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE-----------ARHFLMLSRNL 632
++ A+QL A A+ V+ +E K + + + + + + +
Sbjct: 498 DTLILRAQQLIKADHAQFENVLNTLENEKLMYEQKNADIAERQQRIEKLEKQLADMKQEM 557
Query: 633 HKNLLRTRRKILEHCAS 649
K +T RK E CAS
Sbjct: 558 AKKKEQTLRKTKEQCAS 574
>gi|384245629|gb|EIE19122.1| hypothetical protein COCSUDRAFT_38365 [Coccomyxa subellipsoidea
C-169]
Length = 624
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 301/624 (48%), Gaps = 93/624 (14%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
+ LEW +LC V+ FA T+LGR+ L L+LL ET A ++ +
Sbjct: 1 MATLEWPRLCSHVAQFASTTLGRQEAL------------QLQLLAETRAVNVLEAEYAAD 48
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAA------IKEDA 167
LD G+ S+ + I+ R L + AV LL + LQ ++ +A + E++
Sbjct: 49 LDFGGISTSVAQEGIKRASRGGMLTAAQLAAVAGLLAGAVRLQRAILSAAGQEGRLTEES 108
Query: 168 DLY-----IRFMPL-TQMLYQLMDML-------------IRNENNESLFLE--------- 199
L+ ++ +P +++ + L +R LE
Sbjct: 109 ALWPVVSTVKGLPGHAEIVAGVNSALDEGAKVREGASEDVRRTRGRCRTLEGRLRSLLKG 168
Query: 200 ----VSSIHGR-----LCIRTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARAS 250
VS GR LC+ A + +G+LL S+ +EP +AVPLN+EL AR
Sbjct: 169 FQGEVSEQSGRLCCGRLCVAVAAAEKPPRGVLLGSAAGIIYLEPPAAVPLNNELAAARGE 228
Query: 251 VTKAEEDVLLALTEKMQVDLDE-IEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
AEE VL LT + VD +E + + L ++ LD+ A+A Y G P +
Sbjct: 229 AYAAEEAVLWRLT-GLVVDAEEDVRRALEIVLWLDLTAAKARYGRWINGELPTF---AEF 284
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQA------WKDLESANTEL 363
R+ K + + + T +A L++ + + WK+ + N
Sbjct: 285 ARTTKARTSRQKEAQALQRATASPKEADDEFLIRLRRLRHPLLHADYLIWKEAAARNQPQ 344
Query: 364 RRRKLYGGNAAR-KGEKDTNLSPSEMQVS--------ALELAH------PVPIDIFIARK 408
R G R KD S M V A E H PVPIDI +
Sbjct: 345 SSRAASAGPLRRLSNRKDVMARNSGMLVEDEPSEEEAASEEGHEGTPKPPVPIDICMKPD 404
Query: 409 TRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQ 468
TR ++ITGPNTGGKT LK GLAV+MAK+GL + ++ ++ F V ADIGDEQSL+
Sbjct: 405 TRCVIITGPNTGGKTATLKAFGLAVLMAKAGLPVPAAAPVRLAPFSGVLADIGDEQSLAA 464
Query: 469 SLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIA 528
+LSTFSGHL++I + ++ +SLVLLDE+G GT+P EG ALG++LL A A G+
Sbjct: 465 NLSTFSGHLRRIQALRREADGRSLVLLDEVGTGTDPAEGAALGIALLRALAAGGARGAAI 524
Query: 529 TTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQ 588
T FENA +EFDE L PTY+++WG+PGRS+A+NIA RLGL ++
Sbjct: 525 TDGR------------FENASVEFDEAALAPTYRLMWGIPGRSNALNIASRLGLNADIIA 572
Query: 589 NARQLYGAASAEINEVIIEMERFK 612
+AR G A AE+++ I E+E +
Sbjct: 573 DARDRMGTAQAEVDDAIAELEGLR 596
>gi|344996322|ref|YP_004798665.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|343964541|gb|AEM73688.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 786
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 174/594 (29%), Positives = 287/594 (48%), Gaps = 131/594 (22%)
Query: 217 SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S KG++ S G+ +EP V ++++++ AR+ + E +L L++ + +EI+
Sbjct: 203 SIKGIIHDQSATGATLFVEPFVCVEISNQIRVARSEEKEEIERILQELSQLISDSYNEIK 262
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + +LD++ +A ++ F + +P+ + I L
Sbjct: 263 QNFESLSELDILFTKAQWAHQFRAS----------------KPILNTAG------YINLK 300
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL+ K+K
Sbjct: 301 KARHPLI---EKEKV--------------------------------------------- 312
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
VPID+ + ++ VLVITGPNTGGKT+ LKT+GL ++A+SG+ + + E ++V F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGIFLPADEGSEVCVFS 368
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+K I I + S +LVLLDEIG+GT+P EG AL ++
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + GS + +ATTH+GELKT + FENA EFD LKPTY++L G+PG S+A+
Sbjct: 429 LKFLFKKGSKV-VATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNAL 487
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ LGL +V+ A+ + E+ ++I EMER + + E + A + + NL K
Sbjct: 488 YISSNLGLKEEIVELAKSYMSKKTLELTDIINEMERKRKELEETLENANKLKIEAENLKK 547
Query: 635 NL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
L +++I E + + VQ++ D V
Sbjct: 548 TLEEERRRFEAEKQRIKERASREAREFVQRVEDE-------------------------V 582
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
K ++LR A +SL ++ + ++E ++VK I+Q+ + +
Sbjct: 583 EKLFKELRKIA-ESLK---------------EKEMLKQLEEKKREYENLVKSIEQASQKE 626
Query: 748 ---RTELPN---VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++LP +G V+V SF +G V + SK + V++G MK + +D+
Sbjct: 627 EKLQSKLPENLRLGQKVYVKSFDAEGFVESLPDSKGNLTVRIGIMKLSVNISDV 680
>gi|340755208|ref|ZP_08691905.1| MutS2 protein [Fusobacterium sp. D12]
gi|419840320|ref|ZP_14363712.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421499445|ref|ZP_15946489.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685859|gb|EFS22694.1| MutS2 protein [Fusobacterium sp. D12]
gi|386908352|gb|EIJ73049.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402269698|gb|EJU19022.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 778
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 208/733 (28%), Positives = 330/733 (45%), Gaps = 146/733 (19%)
Query: 74 LGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR 133
+G + +LW IN +LR A +E DL K+ +R+
Sbjct: 81 IGTYLEVDELWDINM----NLRFFRIFQAQLE--------------DLGKYKALRDYMRQ 122
Query: 134 ASPLRPNEAL---AVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRN 190
SPLR E L AV + Q + L LR D+ I L Q + + D L
Sbjct: 123 VSPLRLIEDLISKAVDSEKQIKDEASLDLR-------DIRIHKKMLAQNIRRKFDELFEE 175
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLL------LSSSGIGSVIEPLSAVPLND 242
+ F E V+ GR+ + D FKGL+ SSSG IEPLS V LN+
Sbjct: 176 ASIAVAFQERIVTERDGRMVVPVKVD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 243 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
++++ + +LL L+E+++ DE+ K+ I+ LD + A+A + L P
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFGLEEACHVPT 292
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
I + + +YL KA HP +
Sbjct: 293 I----------------------QGKEILYLEKARHPFI--------------------- 309
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
P E VP+ I + R+L+ITGPNTGGK
Sbjct: 310 ----------------------PKE---------KVVPLTFEIGKDYRILLITGPNTGGK 338
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKT GL +MA SG+ I +SE++K+ +F VFADIGDEQS+ QSLS+FS H+ +
Sbjct: 339 TVALKTAGLLTLMALSGIPIPASEHSKIGFFQGVFADIGDEQSIEQSLSSFSAHVTNLQE 398
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+G+GT+P EG+A MS+++ E I TTH+ E+K Y+
Sbjct: 399 ILREVHRNCLVLLDELGSGTDPTEGSAFAMSIIDYLKEK-KCNAIITTHYSEVKAHGYNE 457
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
+ E A MEFD L PTY++L G+PG S+A+ IA+RLG+P ++ A+ + +I
Sbjct: 458 EGIETASMEFDTATLSPTYRLLMGIPGESNALTIAKRLGVPQDIIDKAQSYISEDNKKI- 516
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
E++I + K++ L+ + L + +++ R+ LE ++ +K
Sbjct: 517 ELMINNIKNKSESLDRMQAELEGLREAARMNQQKWEEERRNLEREKNEILKKA------- 569
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
S + + ++A +L+ K Q+ S Q+ ++ KN ++L+S ++
Sbjct: 570 ------YEDSEKMMNEMRAKASALIEK-IQKEENSKEQA---KQIQKNLNMLSSALKE-- 617
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
+ S+ K +K+ K GD V V + + +V+K+ KE VQ
Sbjct: 618 ------EKNKTISITKTMKKKANFKE------GDRVFVKNINQFASVLKINAMKESAQVQ 665
Query: 783 VGNMKWIMKFTDI 795
G +K + F +I
Sbjct: 666 AGILKLEVPFDEI 678
>gi|334183641|ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2
from Synechocystis sp. and is a member of PF|00488 Muts
family of mismatch repair proteins [Arabidopsis
thaliana]
gi|332196205|gb|AEE34326.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 876
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 239/817 (29%), Positives = 391/817 (47%), Gaps = 151/817 (18%)
Query: 37 VAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRL 96
+ + SDD +S V ++L VLEW LC+ +S FA T++G AT + + ++S L
Sbjct: 35 IRAASSDDSQS-VENQTLEVLEWRALCNQLSPFASTTMGLSATKNAEIPVGNSPEESRNL 93
Query: 97 LDETNAAI---EMQKHGSCSL----DLTGV--------------------DLSLVKSAIR 129
L+ET+AA+ EM K L DL+ + L+ S +
Sbjct: 94 LNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSGQLLTVRELCTVRSTLTAATSTFQ 153
Query: 130 EVRRASPLRPNEALAVVALLQ---FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDM 186
++R+A+ + N +V +LQ F +TLQ + I D ++ + ++ L +
Sbjct: 154 KLRKAA-ISDNRVTPLVDILQGCDFKDTLQQKISFCI--DCNMTMILDRASEDLEIIRSE 210
Query: 187 LIRN-ENNESLFLEVSSI---------------HGRLC--IRTGADQLSFKGLLLS--SS 226
RN EN +SL ++S+ R+C IR L G++LS SS
Sbjct: 211 RRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSS 270
Query: 227 GIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDV 285
IEP AV LN+ ++ A+ KAEE +L+ LT ++ + EI +L+ I++LD+
Sbjct: 271 RATCFIEPKEAVELNN-MEVRHANSEKAEEMAILSILTSEVVMAQREILHLLDRILELDI 329
Query: 286 VNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQH 345
ARA+++ G PN VTS+ + + + + A HPLLL
Sbjct: 330 AFARASHANWINGVYPN---------------VTSEHTKTP-GLAVDIDSAQHPLLL--- 370
Query: 346 KQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFI 405
L S N GG+ PVP+DI +
Sbjct: 371 -------GSVLGSPN---------GGDI-----------------------FPVPVDIKV 391
Query: 406 ARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQS 465
+V+VI+GPNTGGKT LKT+GL +M+KSG+++ + ++PWFD + ADIGD QS
Sbjct: 392 ESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQS 451
Query: 466 LSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLL 525
L QSLSTFSGH+ +I I+ ++ SLVLLDEI +GT+P EG AL S+L+ + ++ +
Sbjct: 452 LEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQ-YIKNRVNV 510
Query: 526 TIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGI 585
+ +TH+G+L LK + F+NA MEF L+PT+++LWG G S+A+ +A+ +G
Sbjct: 511 AVVSTHYGDLSRLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKR 570
Query: 586 VVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLML----SRNLHKNLLRTRR 641
+++NA + + E ++ER K + + E R+ L L + H++L+
Sbjct: 571 ILENAHKWTEKLNPE-----QDVER-KGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYH 624
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
+ LEH + D R+L+ K Q++ + A+S + ++L
Sbjct: 625 E-LEH----------ESHDLDKRERALLKKETQKVQEDLNSAKS----KMERLVAEFESQ 669
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
L T+ + ++ T + V A + D + + P G+ V V+
Sbjct: 670 LEITQADQYNSLILK-----TEEAVAEIIEACCPMDPDSLEEEYSDYS--PQAGEKVLVT 722
Query: 762 SFGKK-GTVIKVEPSKEE--IVVQVGNMKWIMKFTDI 795
G K GTV++ EP ++ ++VQ G ++ +K DI
Sbjct: 723 GLGDKLGTVVE-EPGDDDDTVLVQHGKIRVRIKKKDI 758
>gi|363890216|ref|ZP_09317557.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
gi|361965897|gb|EHL18859.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
Length = 785
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 170/576 (29%), Positives = 279/576 (48%), Gaps = 105/576 (18%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ SSSG IEP++ V +N+ L + K E +L LT + ++I
Sbjct: 205 FPGIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCEDISH 264
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ + QLD + A+ S+ P I ++R++ I L
Sbjct: 265 NCDILEQLDFIMAKGKLSVEMNAIEPKI---------------------NDRKY-IKLIN 302
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ EKD +S +
Sbjct: 303 ARHPLI------------------------------------EKDKVVSST--------- 317
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
I + + L+ITGPNTGGKT+ LKT+GL +M ++GLHI + + FD+
Sbjct: 318 -------IILGGEYSTLIITGPNTGGKTVTLKTLGLCSLMFQAGLHIPCDLESTICIFDN 370
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGDEQS+ QSLSTFS H+ I I+ + SLVL DE+GAGT+P+EG L +S+L
Sbjct: 371 VFADIGDEQSIQQSLSTFSAHMTNIVYIMDNVGNNSLVLFDELGAGTDPIEGAGLAVSIL 430
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E +S ++LT+ATTH+ ELK + + NA +EFD L PTYK+L GVPG+S+A
Sbjct: 431 ETL-KSKNILTVATTHYSELKNYALTQENVTNASVEFDINTLSPTYKLLIGVPGKSNAFE 489
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+++LGL ++ +A++ S ++ +VI ++E+ +T + + E + L ++
Sbjct: 490 ISKKLGLSEEIINSAKEHIKTDSIQMEDVISKLEKIRTDYEKKQEELQKEL-------ED 542
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ R K+ Q+ + + I DA AR L+ A ++ K +++
Sbjct: 543 VKYIRLKLENKEQRQKEQNKKLIEDAKEKARKLIE--------DAKSEADIISKNLNKIK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
S+ + + + L +N + E A + ++ + K E NVG
Sbjct: 595 NSSDYK----NIDRQMNELKTNINKYK----EKYAKSKEELI-----AKSSKPLENINVG 641
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
D+V+V+SF K V+ V+ +K+E+++++G +K +K
Sbjct: 642 DIVYVNSFAKNAKVLSVDDAKDEVLIELGAIKMTVK 677
>gi|15217840|ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|332196204|gb|AEE34325.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 857
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 239/817 (29%), Positives = 391/817 (47%), Gaps = 151/817 (18%)
Query: 37 VAVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRL 96
+ + SDD +S V ++L VLEW LC+ +S FA T++G AT + + ++S L
Sbjct: 35 IRAASSDDSQS-VENQTLEVLEWRALCNQLSPFASTTMGLSATKNAEIPVGNSPEESRNL 93
Query: 97 LDETNAAI---EMQKHGSCSL----DLTGV--------------------DLSLVKSAIR 129
L+ET+AA+ EM K L DL+ + L+ S +
Sbjct: 94 LNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSGQLLTVRELCTVRSTLTAATSTFQ 153
Query: 130 EVRRASPLRPNEALAVVALLQ---FSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDM 186
++R+A+ + N +V +LQ F +TLQ + I D ++ + ++ L +
Sbjct: 154 KLRKAA-ISDNRVTPLVDILQGCDFKDTLQQKISFCI--DCNMTMILDRASEDLEIIRSE 210
Query: 187 LIRN-ENNESLFLEVSSI---------------HGRLC--IRTGADQLSFKGLLLS--SS 226
RN EN +SL ++S+ R+C IR L G++LS SS
Sbjct: 211 RRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSS 270
Query: 227 GIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDV 285
IEP AV LN+ ++ A+ KAEE +L+ LT ++ + EI +L+ I++LD+
Sbjct: 271 RATCFIEPKEAVELNN-MEVRHANSEKAEEMAILSILTSEVVMAQREILHLLDRILELDI 329
Query: 286 VNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQH 345
ARA+++ G PN VTS+ + + + + A HPLLL
Sbjct: 330 AFARASHANWINGVYPN---------------VTSEHTKTP-GLAVDIDSAQHPLLLGSV 373
Query: 346 KQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFI 405
L S N GG+ PVP+DI +
Sbjct: 374 ----------LGSPN---------GGDI-----------------------FPVPVDIKV 391
Query: 406 ARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQS 465
+V+VI+GPNTGGKT LKT+GL +M+KSG+++ + ++PWFD + ADIGD QS
Sbjct: 392 ESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQS 451
Query: 466 LSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLL 525
L QSLSTFSGH+ +I I+ ++ SLVLLDEI +GT+P EG AL S+L+ + ++ +
Sbjct: 452 LEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQ-YIKNRVNV 510
Query: 526 TIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGI 585
+ +TH+G+L LK + F+NA MEF L+PT+++LWG G S+A+ +A+ +G
Sbjct: 511 AVVSTHYGDLSRLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKR 570
Query: 586 VVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLML----SRNLHKNLLRTRR 641
+++NA + + E ++ER K + + E R+ L L + H++L+
Sbjct: 571 ILENAHKWTEKLNPE-----QDVER-KGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYH 624
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
+ LEH + D R+L+ K Q++ + A+S + ++L
Sbjct: 625 E-LEH----------ESHDLDKRERALLKKETQKVQEDLNSAKS----KMERLVAEFESQ 669
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
L T+ + ++ T + V A + D + + P G+ V V+
Sbjct: 670 LEITQADQYNSLILK-----TEEAVAEIIEACCPMDPDSLEEEYSDYS--PQAGEKVLVT 722
Query: 762 SFGKK-GTVIKVEPSKEE--IVVQVGNMKWIMKFTDI 795
G K GTV++ EP ++ ++VQ G ++ +K DI
Sbjct: 723 GLGDKLGTVVE-EPGDDDDTVLVQHGKIRVRIKKKDI 758
>gi|312900671|ref|ZP_07759968.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
gi|311292152|gb|EFQ70708.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
Length = 788
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 228/399 (57%), Gaps = 32/399 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT--ASSSVVKDIKQSPRVKRTELPNVGD 756
Q + G +H L +T + ++ H T A + V+K K+ R+K GD
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEETKLAKNKVLKKAKEQKRLK------AGD 647
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 648 EVIVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|442804258|ref|YP_007372407.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740108|gb|AGC67797.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 794
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 214/796 (26%), Positives = 354/796 (44%), Gaps = 167/796 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
R+LE+D++ + A ++LG+E L + + Y++ R L ET A+ + + GS
Sbjct: 6 FRILEFDRIIEKLKDRASSTLGKE--LAEKLVPSTDYEEIKRTLRETTDAVTCILRKGSP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSE------------------- 153
L + ++ I+ L P E L + +L+ S
Sbjct: 64 PLG----GIHDIRPYIQRAEAGGMLYPGELLKIADVLRVSRNLKNYVSQDKMELEETNTV 119
Query: 154 -----------TLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNE 191
TL+ L AI+ + +L P + + ++ +IR+
Sbjct: 120 YVLCSGLGTDRTLEERLNQAIENEEELSDYASPALAAIRRDIRRMQDAVKDKLNSIIRSA 179
Query: 192 NNESLFLE-VSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
N + + V ++ G R I A+ S F GL+ +S SG +EP++ V LN+E++Q
Sbjct: 180 QNRKIMQDAVVTLRGDRYVIPVKAEYRSQFPGLVHDVSQSGATIFVEPMAVVELNNEIRQ 239
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL----DVVNARATYSLSFGGTSPN 302
+ + E +L LT ++ +I +ML ++L D V A+A SL GT
Sbjct: 240 LKIKEEREVERILTELTGEVA----KISEMLKANVKLLALIDFVFAKARLSLDLKGT--- 292
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
EPV +K E I + K HPL
Sbjct: 293 -------------EPVLNK------ERRIVIKKGRHPL---------------------- 311
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
++ A VP+DI + +VITGPNTGGK
Sbjct: 312 ------------------------------IDPAVVVPVDISLGEDFTTMVITGPNTGGK 341
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKT+GL V+M ++GLHI ++E +++ F VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 342 TVTLKTMGLFVLMTQAGLHIPAAENSEMCVFTKVFADIGDEQSIEQSLSTFSAHMTNIVG 401
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + SLVL DE+GAGT+P EG AL ++L+ + G + T+ATTH+ ELK +
Sbjct: 402 ILREVDENSLVLFDELGAGTDPTEGAALAKAILDRLTKRG-IRTMATTHYSELKIYAMTT 460
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
NAC EFD L+PTY++L G+PGRS+A I+ RLGL +++ A++ +
Sbjct: 461 PGVRNACCEFDVETLRPTYRLLIGIPGRSNAFAISLRLGLDEGIIEEAKRFMRGEDIQFE 520
Query: 603 EVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA 662
E++ ++++ + + + A L K + R R+ A++ RK K D
Sbjct: 521 ELLSDIQKNRLETEKERERAYREL-------KEIERLRQ------AAEEQRK--KTEDEK 565
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
+ K A+ + +A + + +R ++L + Q + + L N ++T
Sbjct: 566 ESILNQARKEARAILANARRQAEEIMERLKELEKAYQQR----NIDREMMELRQNLRKTM 621
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELP---NVGDLVHVSSFGKKGTVIKVEPSKEEI 779
E A + +++ PR + P GD V + + ++GTV++ +
Sbjct: 622 ---NELDAQMAETIL------PRRGDGKPPENLKPGDTVMIINLNQRGTVLEAPDKDGNV 672
Query: 780 VVQVGNMKWIMKFTDI 795
++Q G MK M T +
Sbjct: 673 LIQAGIMKVKMHITQL 688
>gi|153810971|ref|ZP_01963639.1| hypothetical protein RUMOBE_01362 [Ruminococcus obeum ATCC 29174]
gi|149832859|gb|EDM87942.1| MutS2 family protein [Ruminococcus obeum ATCC 29174]
Length = 793
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 179/602 (29%), Positives = 277/602 (46%), Gaps = 119/602 (19%)
Query: 204 HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLL 260
+GR CI A+ + G++ S GS IEP+S V LN+++++ K E +L
Sbjct: 192 NGRYCIPVKAEYKGQVPGMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILA 251
Query: 261 ALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
L++++ + + I L ++QLD + ARAT ++ + P +F
Sbjct: 252 DLSQQIATEQEAISLNLELMVQLDFIFARATLAMEMNASEP-VF---------------- 294
Query: 321 KVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
E I L KA HPL+ +K+K
Sbjct: 295 -----NDEGRINLKKARHPLI---NKKKV------------------------------- 315
Query: 381 TNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
VPIDI + + +LVITGPNTGGKT+ LKTVGL +M +SGL
Sbjct: 316 ------------------VPIDIRLGDEFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGL 357
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + + +++ F V+ADIGDEQS+ QSLSTFS H+ I + + ++ SLVL DE+ +
Sbjct: 358 HIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFLGKADRHSLVLFDELCS 417
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL +S+L E G + T+ATTH+ ELK S ENAC EF+ L PT
Sbjct: 418 GTDPTEGAALAISILSYLHERG-IRTMATTHYSELKVFALSASGIENACCEFNVETLSPT 476
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI-------IEMERFKT 613
Y++L G+PG+S+A I+ +LG+P +++ AR+ +V+ I +E +T
Sbjct: 477 YRLLIGIPGKSNAFAISSKLGIPESIIEKAREQINEQDESFEDVLTSLEESRITIENERT 536
Query: 614 QFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSA 673
+ ++ E N + L + +I+ + + +Q D A L HK
Sbjct: 537 EIAQYKLEIETLKKQLENKQEKLDVQKERIIRQANEEAHKVLQDAKDYADQTMKLFHKFH 596
Query: 674 QQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS 733
+ +A+ R R Q+L + + T K + VLT+
Sbjct: 597 NEYVDTAAVERERQQLR-QRLNKAEQKMAQPTPKKKPKKVLTA----------------- 638
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
KDI ++GD V V S KGTV SK + VQ+G ++ + +
Sbjct: 639 ----KDI------------HLGDTVRVLSMNLKGTVSTRPDSKGYLFVQMGIIRSKVHIS 682
Query: 794 DI 795
D+
Sbjct: 683 DL 684
>gi|375307738|ref|ZP_09773025.1| MutS2 protein [Paenibacillus sp. Aloe-11]
gi|375080069|gb|EHS58290.1| MutS2 protein [Paenibacillus sp. Aloe-11]
Length = 788
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 219/411 (53%), Gaps = 52/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHMHAMGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLP ++ AR + AS E N + E ER K + L EA
Sbjct: 492 AIAERLGLPSRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRREMEA--- 548
Query: 626 LMLSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LR+R + L+ SQR R ++K D AR LV K AR
Sbjct: 549 -----------LRSRHQTELDKLESQRDRMLEKAEDE---ARVLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K LR A + K +H L + ++ +D+ E P + VK
Sbjct: 584 SEAEKIISDLRKLAQEEGASVK----EHKLIAARKE--LDEAE-PKQRKKNTVKRA---- 632
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ SK E VVQ+G MK + D+
Sbjct: 633 -ATRTRSIMAGDEVTVHSLNKKGHVVELSGSK-EAVVQLGIMKMKVSLDDL 681
>gi|332522497|ref|ZP_08398749.1| MutS2 family protein [Streptococcus porcinus str. Jelinkova 176]
gi|332313761|gb|EGJ26746.1| MutS2 family protein [Streptococcus porcinus str. Jelinkova 176]
Length = 777
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 224/398 (56%), Gaps = 41/398 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PVP D+ +R+ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ + + + F
Sbjct: 307 LKNPVPNDLHFSRQLSVIVITGPNTGGKTIMLKTLGLAQIMGQSGLPILADQGSSIAVFT 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTNIVAILDKADQDSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + + T+ATTH+ ELK F ENA MEFD LKPTY + GVPGRS+A
Sbjct: 427 LEQLRLT-EIKTMATTHYPELKAYGIETAFVENASMEFDSRSLKPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V A Q+ + S ++N +I E+E+ Q LE H H + + NL
Sbjct: 486 EIARRLGLADHIVNQAEQMTDSDS-DVNRIIEELEK---QTLESRHRLDHIKEVEQDNLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
N R +K+ A + ++++K S A +L ++++ +A L + Q
Sbjct: 542 FN--RAVKKLYHEFAQAKNKEIEKASLEAQEIVTLALAESEEILAKLHEASVL---KPHQ 596
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
+ + SQ L QT + + V+K + K+ P
Sbjct: 597 IIEAKSQ-------------LKKLIPQTEL--------TQNKVLK------KAKKLRQPQ 629
Query: 754 VGDLVHVSSFGKKGTVIK-VEPSKEEIVVQVGNMKWIM 790
VGD + V+++G++GT++K V+ +K E QVG +K +
Sbjct: 630 VGDDILVTAYGQRGTLLKQVKGNKWE--AQVGLIKMTL 665
>gi|365853718|ref|ZP_09393983.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
gi|363711876|gb|EHL95582.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
Length = 788
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 271/565 (47%), Gaps = 119/565 (21%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S+SG +EP + V +N++L++ + + + +L LTE ++ E+ +
Sbjct: 209 FGGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERTEQRRILAELTEMIRPYRQELLE 268
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+N + QLD VNA+A Y+ G P K+S+ E + L
Sbjct: 269 NMNLVGQLDFVNAKAKYAHQSGAVLP-------------------KIST---ENVVNLRH 306
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ ++ + P+++++ A
Sbjct: 307 ARHPLIAKE-------------------------------------KVVPNDIKIGA--- 326
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
+ +++TGPNTGGKTI +KTVGL +M +SGL I + E +++ FD
Sbjct: 327 ------------DYQTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITADEESQIGVFDD 374
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
VFADIGD+QS+ +LSTFS H+ I I+ Q T +SLVLLDE+GAGT+P EG AL M+++
Sbjct: 375 VFADIGDDQSIEANLSTFSSHMDNIIAIMKQLTDKSLVLLDELGAGTDPKEGAALAMAII 434
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+A SG + IATTH+ ELK Y+ NA MEFD L+PTY++L G+PG+S+A+N
Sbjct: 435 DAIHRSGCEM-IATTHYPELKAFAYNRPGIINASMEFDVETLRPTYRLLLGIPGQSNALN 493
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
IA RLG+P +VQ A+ + + +IN +I E+ + + E L + LH +
Sbjct: 494 IASRLGMPEQIVQQAKSFTDSENQDINNMIAELTSQTKRAHDEADELATELSEATKLHAD 553
Query: 636 LLR-------TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
L + + ++ EH Q V+K A + +H+ +Q+ + + L+
Sbjct: 554 LQKRFDQYQNQKDRLQEHAREQANEIVEKAKHNADKIIADLHRKQRQVGKTTVKENELID 613
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
+ + + SL KV K + K +H A
Sbjct: 614 AKGALNQLEVAPSLKRNKVLKKE-------------KAKHNFKA---------------- 644
Query: 749 TELPNVGDLVHVSSFGKKGTVIKVE 773
GD V V S+G++GT+I+ E
Sbjct: 645 ------GDEVLVKSYGQQGTLIRQE 663
>gi|384165327|ref|YP_005546706.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens LL3]
gi|328912882|gb|AEB64478.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
LL3]
Length = 785
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 281/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIV 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYT-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I +I+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEQSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E A + K+ + A K+A++L +A +A ++ ++L
Sbjct: 553 EL---QQQIIELNAQK-----DKLMEEAE------QKAAEKLEDAAKEAEQII----REL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R S Q K +H L +D + A + K + + ++
Sbjct: 595 R-SIKQEHRSFK----EHEL--------IDAKKRLGDAMPAFEKSKQPERKTEKKRELKP 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + ++E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGALLE-KTGEKEWNVQIGILKMKVKEKDL 681
>gi|225181647|ref|ZP_03735087.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
gi|225167628|gb|EEG76439.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
Length = 775
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 219/404 (54%), Gaps = 47/404 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI + + R LVITGPNTGGKT+ LKTVGL +MA+SGLH+ + E +++ F +FA
Sbjct: 311 VPISLEMGENLRTLVITGPNTGGKTVTLKTVGLFSIMAQSGLHVPAEEGSELAVFPRIFA 370
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQ ++QSLSTFSGHLK I +I+ Q SLVLLDE+GAGT+P EG L M++LE
Sbjct: 371 DIGDEQDITQSLSTFSGHLKNIIDILGQLVPGSLVLLDEVGAGTDPTEGAGLAMAILEYL 430
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G++ T+ TTH+ +LKT Y ENA +EFD L+PTY++L GVPG S+A IA+
Sbjct: 431 HNFGAV-TVGTTHYSQLKTFAYVTQGMENASVEFDVATLRPTYQLLVGVPGVSNAFAIAQ 489
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEM-------ERFKTQFLEHVHEARHFLMLSRN 631
RLGL +++ ++ + EV+ ++ E Q + +++ L+ +
Sbjct: 490 RLGLDQDIIRRGKEFLSQEETRLEEVVADLVADRQRIEVVSRQVEDERQQSKALLLQIQQ 549
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
++L R + +ILE R Q+ +A + K +++ +AS + V A
Sbjct: 550 EKEDLARRKSEILEKAR----RDAQETVISAKREAQQLLKQLRKMAAAASPLQEEVENAA 605
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
++LR L ++F + V + ++ + +
Sbjct: 606 EKLRK-----------------LDTDFTELQVSQSTSKPLSAEELTE------------- 635
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G V+V+S G++GTV+K + +I VQVG M+ ++ D+
Sbjct: 636 ---GSEVYVNSLGQRGTVVKA--GQSQIQVQVGMMRITVEPADL 674
>gi|404328575|ref|ZP_10969023.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 786
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 279/589 (47%), Gaps = 120/589 (20%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ S+SG IEP S V LN++L +ARA E +L L+EK D +
Sbjct: 207 AFGGIVHDQSASGATLFIEPQSIVDLNNQLSEARAKERHEVERILRVLSEKTAEYADGLL 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ G+ QLD + A+A+Y + P + ++R I L
Sbjct: 267 DSVAGLAQLDFIFAKASYGHQMKASRPRL---------------------NDR-GVIRLK 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+A HPL+ SP +
Sbjct: 305 RARHPLI------------------------------------------SPDRV------ 316
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
VPID+ +T L+ITGPNTGGKT+ LKT GL +MA+SGL I + E ++V F
Sbjct: 317 ----VPIDVLFDEQTHALIITGPNTGGKTVSLKTTGLLTLMAQSGLQIPAEEGSEVSVFK 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q QSLVL DE+GAGT+P EG AL +++
Sbjct: 373 KVFADIGDEQSIEQSLSTFSSHMTNIVGILGQVDDQSLVLFDELGAGTDPQEGAALSIAI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G+ + + TTH+ ELK Y NA +EFD L PTY++L G+PGRS+A
Sbjct: 433 LDTVYGRGATI-VCTTHYSELKAYAYERPGVMNASVEFDVETLSPTYRLLLGIPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+++LGLP ++ AR + +I+++I +E+ + AR
Sbjct: 492 EISKKLGLPEEIIDEARLQISHETNQIDKMIASLEQNRKAAETEEENARK---------- 541
Query: 635 NLLRTRRKILEHCASQRFRKV-QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
L+H A R ++ +K++D + ++ +Q+ A + K+A+Q
Sbjct: 542 ---------LKHDAQAREAELTKKLND--------LERNKEQILIQAKEKAERAVKKARQ 584
Query: 694 LRPSASQSLHCTK----VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
+LH K V ++Q + +D +E + S +K Q P+
Sbjct: 585 EADEIIAALHHYKNSGNVKEHQLIDAKTRLSHALDALE---STDSRKIKHRIQVPK---- 637
Query: 750 ELP---NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++P GD V ++SFG+ G ++ + + E +VQ G +K ++ +D+
Sbjct: 638 KMPAGFKSGDHVRMTSFGQDGYIVD-KINDHEYLVQAGVLKMNVQDSDL 685
>gi|326391467|ref|ZP_08213002.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392940299|ref|ZP_10305943.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
gi|325992493|gb|EGD50950.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392292049|gb|EIW00493.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
Length = 791
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 293/624 (46%), Gaps = 139/624 (22%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGS 111
+++ LE+DK+ + + + LG++ I + ++ R LD N AI + +G
Sbjct: 9 AIKSLEFDKIVEFIVGYCDSDLGKQKASD--IVIKKDIEEIERELDLLNEAISFISSYGG 66
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
S + + I++ + S L E L + L ++ + +++D ++
Sbjct: 67 ISFAFEDI-----RDYIKKAQIDSVLYNQELLKIKKFLNLVSQIKGYFKNL--QESDRFV 119
Query: 172 RF-------MPLTQMLYQLMDMLIRNEN-------------------NESLFLEVSSI-- 203
R +P+ + ++ +++I + NE + ++SI
Sbjct: 120 RLKEYDKKVLPIKNLEKRIENIIISEDEIADDASPMLKALRRQKLSINEKIRATLNSIIS 179
Query: 204 --------------HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
GR + + S FKG++ SSSG IEP+ V LN+EL+Q
Sbjct: 180 TRQKELQEPIITVRQGRYVVPVKQEYRSTFKGIVHDQSSSGATLFIEPMQVVDLNNELRQ 239
Query: 247 ARASVTKAEEDVLLALTEKM----QVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
+ + +L L++++ Q+ D+IE + + LD + A+A YSL P
Sbjct: 240 VELKEKQEIQRILFELSQEVKKYSQILFDDIEIVSD----LDFIFAKAKYSLKLKAVRPE 295
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
+ ++ + I L KA HPL+ Q
Sbjct: 296 L-------NTMGY---------------INLKKARHPLINQ------------------- 314
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
E+ P+ DI+I + LVITGPNTGGK
Sbjct: 315 -------------------------------EVIVPI--DIYIGDQFNTLVITGPNTGGK 341
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKTVGL +MA +GL+I + E ++V F+ VF DIGDEQS+ QSLSTFS H+ I +
Sbjct: 342 TVTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+GAGT+P+EG AL MS+L+ + G+ TIATTH+ ELK
Sbjct: 402 ILQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGA-KTIATTHYSELKQYALKA 460
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
ENA +EFD LKPTYK++ G+PG+S+A I++RLGLP +++NAR+ + +
Sbjct: 461 PGVENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE 520
Query: 603 EVIIEMERFKTQFLEHVHEARHFL 626
++I ++E K + LE ++ FL
Sbjct: 521 DIIADVES-KRRELEKANQEIAFL 543
>gi|317129869|ref|YP_004096151.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
gi|315474817|gb|ADU31420.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
Length = 788
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 276/580 (47%), Gaps = 105/580 (18%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S+SG IEP S V +N++L++AR + +LLAL+ + +E+
Sbjct: 209 FGGMVHDQSASGATLFIEPSSVVEINNQLREARMKEKQEISRILLALSVLVSEVAEELLT 268
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
++ + ++D + A+A YSL GGT P + + I++ K
Sbjct: 269 IVEVMSEIDFIFAKALYSLEIGGTQPKL----------------------NEDGYIHMAK 306
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL+ A E+
Sbjct: 307 ARHPLI-----------------AKDEI-------------------------------- 317
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
VPIDI I ++ LVITGPNTGGKT+ LKTVGL +M +SGL I E + F
Sbjct: 318 ---VPIDIEIGKEYSSLVITGPNTGGKTVTLKTVGLLTLMVQSGLQIPCEEGSSAAVFQH 374
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I +I+ +SLVL DE+GAGT+P EG AL +S+L
Sbjct: 375 IFADIGDEQSIEQSLSTFSSHMTNIVDILKHVDHRSLVLFDELGAGTDPTEGAALAISIL 434
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+ G+ + IATTH+ ELK Y+ + NA +EFD L+PTY++L GVPGRS+A
Sbjct: 435 DYVYNVGAKV-IATTHYSELKGYAYNREGVMNASVEFDVETLRPTYRLLIGVPGRSNAFA 493
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+ RLGL ++++A+ A + +I +I +E + + E+ + LH+
Sbjct: 494 ISRRLGLSDTIIEDAKSHITADTNKIENMIASLESSRKNAEREMEESELLRKEAEQLHQQ 553
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L + F K+Q + I + K+ Q L + ++A ++ + + R
Sbjct: 554 L------------EKEFEKLQ--MEREKILQQAEEKAEQSLNKATAEAEKIISELREIQR 599
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ H K + + V+K + +SS K K P G
Sbjct: 600 SNPQIKDHQLIEAKKR---LEEAKPHLVNKKSNEKPKTSSNSKKKKLIP----------G 646
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V SF +KG +++ + + +E VQ+G MK +K DI
Sbjct: 647 DEVKVLSFDQKGHIVE-QVNDKEYFVQLGMMKMKVKADDI 685
>gi|390456779|ref|ZP_10242307.1| MutS2 protein [Paenibacillus peoriae KCTC 3763]
Length = 788
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 219/411 (53%), Gaps = 52/411 (12%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + +++ FD
Sbjct: 313 LEQVVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPVEDESQLCVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+++ADIGDEQS+ Q+LSTFS H+ I +I+ T +SLVLLDE+GAGT+P EG+AL +S+
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGTDPAEGSALAVSI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A
Sbjct: 433 LEHMHAMGCRM-VATTHYSELKAYAYERKGIINASMEFDVATLSPTYRLLVGVPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
IAERLGLP ++ AR + AS E N + E ER K + L EA
Sbjct: 492 AIAERLGLPSRILDYARGEVTEEDQRVEHMIASLEQNRLTAEQEREKAEQLRTEMEA--- 548
Query: 626 LMLSRNLHKNLLRTRRKI-LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
LR+R + L+ SQR R ++K D AR LV K AR
Sbjct: 549 -----------LRSRHQTELDKLESQRDRMLEKAEDE---ARVLVDK-----------AR 583
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S K LR A + K +H L + ++ +D+ E P + VK
Sbjct: 584 SEAEKIISDLRKLAQEEGASVK----EHKLIAARKE--LDEAE-PKQRKKNTVKRA---- 632
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
RT GD V V S KKG V+++ SK E VVQ+G MK + D+
Sbjct: 633 -ATRTRSIMAGDEVSVHSLNKKGHVVELSGSK-EAVVQLGIMKMKVSLDDL 681
>gi|308174555|ref|YP_003921260.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM 7]
gi|307607419|emb|CBI43790.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM
7]
Length = 785
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 281/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIV 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDSIFAKARYAKAMKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYT-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I +I+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E A + K+ + A K+A++L +A +A ++ ++L
Sbjct: 553 EL---QQQIIELNAQK-----DKLMEEAE------QKAAEKLEDAAKEAEQII----REL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R S Q K +H L +D + A + K + + ++
Sbjct: 595 R-SIKQEHRSFK----EHEL--------IDAKKRLGDAMPAFEKSKQPERKTEKKRELKP 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + ++E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGALLE-KTGEKEWNVQIGILKMKVKEKDL 681
>gi|422314862|ref|ZP_16396313.1| MutS2 protein [Fusobacterium periodonticum D10]
gi|404593261|gb|EKA94832.1| MutS2 protein [Fusobacterium periodonticum D10]
Length = 778
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 188/650 (28%), Positives = 309/650 (47%), Gaps = 131/650 (20%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFDEPSLANAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KFD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSS 325
++ + D+I + + + LD++NA++ Y++ P + S
Sbjct: 256 LRNNRDDILAIGDKALYLDILNAKSIYAVDNKCEIPTV---------------------S 294
Query: 326 EREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSP 385
RE + L KA HP + +KD +
Sbjct: 295 NRE-VLSLEKARHPFI------------------------------------DKDKVV-- 315
Query: 386 SEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSS 445
P+ +I + +L+ITGPNTGGKT+ LKT GL +MA SG+ I +S
Sbjct: 316 ------------PLTFEI--GKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIAIPAS 361
Query: 446 EYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPL 505
E +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I++ T SLVLLDE+G+GT+P+
Sbjct: 362 ENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPI 421
Query: 506 EGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILW 565
EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L PTY++L
Sbjct: 422 EGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLV 480
Query: 566 GVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+ + E
Sbjct: 481 GIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELDEMRERFAR 539
Query: 626 LMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS 685
L L + + I+E ++ I ++ ++ + + ++A +
Sbjct: 540 LEEEARLDRERAKQETLIIEKQKNE-------------IIKAAYEEAEKMMNEMRAKASA 586
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR 745
LV K ++ ++ KN ++L++ ++ VE VVK IK
Sbjct: 587 LVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VVKKIKTKVN 634
Query: 746 VKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 635 FK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFEEI 678
>gi|384160390|ref|YP_005542463.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|384169470|ref|YP_005550848.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
gi|328554478|gb|AEB24970.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|341828749|gb|AEK90000.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
Length = 785
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 281/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIV 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYT-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I +I+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEQSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E A + K+ + A K+A++L +A +A ++ ++L
Sbjct: 553 EL---QQQIIELNAQK-----DKLMEEAE------QKAAEKLEDAAKEAEQII----REL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R S Q K +H L +D + A + K + + ++
Sbjct: 595 R-SIKQEHRSFK----EHEL--------IDAKKRLGDAMPAFEKSKQPERKTEKKRELKP 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + ++E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGALLE-KTGEKEWNVQIGILKMKVKEKDL 681
>gi|399046291|ref|ZP_10738749.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|433543508|ref|ZP_20499913.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
gi|398055652|gb|EJL47713.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|432185182|gb|ELK42678.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
Length = 785
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 227/799 (28%), Positives = 370/799 (46%), Gaps = 180/799 (22%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGRE--ATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
L+ LE+DK+ + A + G+E A LT LDE A + + +
Sbjct: 6 LKTLEYDKIIALLVDKASCTYGKEKAAELTPFVR-----------LDEVKIAQQGTEEAA 54
Query: 112 CSLDLTGVDLSLVKSAIREVRRA-SPLRPNEALAVVALLQFSET---------------- 154
L L G S IR++R + R N LA + LL + T
Sbjct: 55 TVLRLKG---SAPLGGIRDIRGSVQRARLNAMLAPMELLDIASTVMAGRRLKTFLLDMCE 111
Query: 155 -------------------LQLSLRAAIKEDADLY----IRFMPLTQMLYQL-------M 184
L++ +R I E+ D+ + + Q + Q+ +
Sbjct: 112 DHEMPLIKQQAERIEGLRELEMEIRRCIDENGDVMDSASMELRQVRQEIRQVESRIREKL 171
Query: 185 DMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVP 239
D + R+ + + + +E + +I G R I + + F G++ S+SG IEP V
Sbjct: 172 DQMTRSSSYQKMLMENIVTIRGDRFVIPVKQEYRHVFGGIVHDQSASGATLFIEPEVIVS 231
Query: 240 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 299
+N++L++ R + E +L LTE++ +D + + ++ + +LD + A+A + S
Sbjct: 232 MNNKLRELRLREEREVERILYLLTEQVAFAVDALVENVDALTELDFMFAKAQLAWSMKAV 291
Query: 300 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 359
P + ++R + + + KA HPL+
Sbjct: 292 CPKL---------------------NDRGY-LNMKKARHPLI------------------ 311
Query: 360 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 419
P E+ V P+D+ + + + +V+TGPNT
Sbjct: 312 -------------------------PREVVV---------PVDVELGGEYQAIVVTGPNT 337
Query: 420 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 479
GGKT+ LKT+GL +MA +GLHI + E +++ F SVFADIGDEQS+ QSLSTFS H+K
Sbjct: 338 GGKTVSLKTIGLLSLMAMAGLHIPAEEESEMTVFSSVFADIGDEQSIEQSLSTFSSHMKN 397
Query: 480 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 539
I +I+ + ++SLVL DE+GAGT+P EG AL MS+++ +SG+ L +ATTH+ ELK
Sbjct: 398 IISILEKMDAKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSELKAYA 456
Query: 540 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 599
Y NA +EFD L+PTY++L GVPGRS+A IA RLGLP +++ AR G+ S
Sbjct: 457 YDRPEVINASVEFDVQTLRPTYRLLVGVPGRSNAFAIARRLGLPEAIIEVAR---GSISE 513
Query: 600 EINEV---IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ 656
E N+V I +ER + + R +R + L R + A ++ + ++
Sbjct: 514 EDNQVESMIASLERNR----KSAEADRLAAAAARKEAEELRRQLEEERARFAEEKNKLME 569
Query: 657 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 716
+ D A IA L + A+ + R L R + + + + K L +
Sbjct: 570 RAEDEARIAVQLAKEEAETII------RELREMRDEGVEIKEHRLIDAKK------RLGN 617
Query: 717 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSK 776
+ +KV+ PA A V+ T++ VGD V V+SFG+KGTV++ + +
Sbjct: 618 AVLELEKEKVKKPAKA-------------VRATQI-KVGDEVMVTSFGQKGTVLE-KVNN 662
Query: 777 EEIVVQVGNMKWIMKFTDI 795
+E +VQ+G MK ++ D+
Sbjct: 663 DEFLVQIGIMKMKVRREDM 681
>gi|423090112|ref|ZP_17078447.1| MutS2 family protein [Clostridium difficile 70-100-2010]
gi|357557023|gb|EHJ38589.1| MutS2 family protein [Clostridium difficile 70-100-2010]
Length = 792
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|291545360|emb|CBL18468.1| MutS2 family protein [Ruminococcus sp. SR1/5]
Length = 793
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 282/597 (47%), Gaps = 111/597 (18%)
Query: 205 GRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR CI A+ + G++ S GS IEP++ V LN+++++ K E +L +
Sbjct: 193 GRYCIPVKAEYKGQVPGMIHDQSATGSTLFIEPMAVVKLNNDIRELELKEQKEIEVILAS 252
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L++++ +L+ I L+ ++QLD + ARA L DM S EPV +
Sbjct: 253 LSQQVAAELEAIHADLSIMVQLDFIFARAA-------------LAMDMNAS---EPVFNT 296
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
E I L +A HPL+ K+K
Sbjct: 297 ------EGRIRLRQARHPLI---DKKKA-------------------------------- 315
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
VPIDI + +LV+TGPNTGGKT+ LKTVGL MM +SGLH
Sbjct: 316 -----------------VPIDIRLGDDFDLLVVTGPNTGGKTVSLKTVGLLTMMGQSGLH 358
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + + +++ F V+ADIGDEQS+ QSLSTFS H+ + + + + SLVL DE+GAG
Sbjct: 359 IPALDRSELALFREVYADIGDEQSIEQSLSTFSSHMTNVVSFLKSADQDSLVLFDELGAG 418
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L E G + T+ATTH+ ELK S ENAC EFD L+PTY
Sbjct: 419 TDPTEGAALAIAILSHLHEQG-IRTMATTHYSELKIYALSTPGVENACCEFDVETLRPTY 477
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
++L GVPG+S+A I+ +LGLP ++ A++ +V+ +E+ + E
Sbjct: 478 RLLIGVPGKSNAFAISSKLGLPDFIIDKAKEQISEQDESFEDVLTSLEQSRVTIENERAE 537
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L K+L K+ E RK + + +A A +++ + + A
Sbjct: 538 IARYKEQVEELKKSLQEKEEKLDE-------RKERILREANEQAHAILRDTKEY----AD 586
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ---QTTVDKVEHPATASSSVVK 738
Q L HK + HV T++ + Q ++ SS +
Sbjct: 587 QTMKLFHKF------------------QKDHVDTASVEKERQNLKKRMSKAENGMSSRQQ 628
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K ++K ++L ++GD V V S KGTV S+ + VQ+G ++ + +D+
Sbjct: 629 KQKPKKQLKPSDL-SLGDTVKVLSLNLKGTVSSHPDSRGYLFVQMGIIRSKVHISDL 684
>gi|126698288|ref|YP_001087185.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|123363473|sp|Q189Q3.1|MUTS2_CLOD6 RecName: Full=MutS2 protein
gi|115249725|emb|CAJ67542.1| DNA mismatch repair protein [Clostridium difficile 630]
Length = 792
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|336394748|ref|ZP_08576147.1| mutS family ATPase [Lactobacillus farciminis KCTC 3681]
Length = 784
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 216/786 (27%), Positives = 359/786 (45%), Gaps = 158/786 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGR-----------EATLTQLWSINQTYQDSLR----- 95
++L+VLE+DK+ ++ + T+ G+ E+ + +L + D +R
Sbjct: 4 KALKVLEFDKIKAEIAKYLITTRGKTLLKKLMPMSVESIVQRLIDQTKDGADIIRIKGEI 63
Query: 96 ----LLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIR---EVRRASPLRPNEALAVVAL 148
L D + A ++K G+ L G +LS + ++ E++ +E L + L
Sbjct: 64 PVRKLADLHDQANRLKKDGN----LNGTELSQIGQVLQNTSELKEFFEDLKDEQLDLRQL 119
Query: 149 LQFSETL----QLSLRAAIKED----------ADL-YIR--FMPLTQMLYQLMDMLIRNE 191
++ L +L+ A D DL YIR L + M+ R +
Sbjct: 120 YDLNDNLIDNPELTKHLARSLDDTGRVLDTASEDLKYIRNQITRLNDQIRHTMEQYTRGK 179
Query: 192 NNESLFLEVSSIHG-RLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQA 247
N + L + ++ R I + + F G++ S+SG IEP + V +N++L +A
Sbjct: 180 NTKYLTENLVTLRDDRFVIPVKTEYKTKFGGVVHDQSASGQTLYIEPQAVVGMNNQLHEA 239
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
+ S E +L L++ ++ +DEI + + Q D++NA+A Y+ T
Sbjct: 240 QVSEKAEEIRILNKLSDLVRPQIDEILENNEVLAQFDLINAKAKYAKEIKAT-------- 291
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRK 367
EP+ SK + + L A HPL+
Sbjct: 292 --------EPIISK------DHIVDLHDAKHPLI-------------------------- 311
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLK 427
P ++ V DI + + ++ITGPNTGGKTI +K
Sbjct: 312 ----------------DPDKV----------VANDIKMGEGYKTMLITGPNTGGKTITMK 345
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQS 487
T+GL +MA++GL I + E +++ FD VF DIGDEQS+ Q+LSTFS H+ I NII +
Sbjct: 346 TLGLIQLMAQAGLFIPAHEESEIAVFDEVFVDIGDEQSIEQNLSTFSSHMDNIINIIRKV 405
Query: 488 TSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 547
+ SLVL+DE+GAGT+P EG A+ +++LE A+S + +ATTH+ ELK Y+ N
Sbjct: 406 SEHSLVLIDELGAGTDPQEGAAIAIAILEKLAQSHCFI-MATTHYPELKIFAYNTPETIN 464
Query: 548 ACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIE 607
A MEFDE LKPTY++L G+PG S+A NIA RLG+ VV + L S ++N +I +
Sbjct: 465 ASMEFDEKSLKPTYRLLIGIPGASNAFNIAARLGMDKGVVNRGQALMDGESQDLNNMIAD 524
Query: 608 MERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARS 667
+E + +F + + + L ++++ K+ + + + S+ I A A
Sbjct: 525 LENRRKEFEQKNDQLKVQLAKNKDVQKDYEKKSDALDKSKNSE-------IQAAKVRANQ 577
Query: 668 LVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG-KNQHVLTSNFQQTTVDKV 726
+V K+ ++ + + +HK Q + K G KN H
Sbjct: 578 IVSKARKE----SDKIIEKLHKLEQDGVAVKEDQIIAAKTGLKNLH-------------- 619
Query: 727 EHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNM 786
+ A + V++ R KR + VGD V + + GT+++ + E VQ+G +
Sbjct: 620 QDEAVKKNRVLR------RNKRRQQLKVGDTVKSLQYDQIGTIVR-KNKNNEFEVQLGIL 672
Query: 787 KWIMKF 792
K MKF
Sbjct: 673 K--MKF 676
>gi|90962080|ref|YP_535996.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227891101|ref|ZP_04008906.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
gi|122448818|sp|Q1WT38.1|MUTS2_LACS1 RecName: Full=MutS2 protein
gi|90821274|gb|ABD99913.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227866975|gb|EEJ74396.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
Length = 786
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 269/565 (47%), Gaps = 114/565 (20%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L++++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D +NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFINAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L++ V DI
Sbjct: 311 -------------------------------------------------LDMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ FD +FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++V ARQL S ++NE+I ++ + E R +L + LH +
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD-------- 552
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
LE Q R+ + + + A + A Q+ + + ++++ SA+ ++
Sbjct: 553 LETNFHQFERQKENMLEQA-------KERANQIVEETKKKSDELISELRKMKMSAASNIE 605
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
+ Q + + Q+T + K + V++ KQ + PN D V V+S+
Sbjct: 606 EGSLIDAQGRVNALHQETNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSY 651
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKW 788
G++G +++ + GN W
Sbjct: 652 GQRGVLLR----------KAGNHAW 666
>gi|301300876|ref|ZP_07207048.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851475|gb|EFK79187.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 786
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 269/565 (47%), Gaps = 114/565 (20%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L++++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D +NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFINAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L++ V DI
Sbjct: 311 -------------------------------------------------LDMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ FD +FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++V ARQL S ++NE+I ++ + E R +L + LH +
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD-------- 552
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
LE Q R+ + + + A + A Q+ + + ++++ SA+ ++
Sbjct: 553 LETNFHQFERQKENMLEQA-------KERANQIVEETKKKSDELISELRKMKMSAASNIE 605
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
+ Q + + Q+T + K + V++ KQ + PN D V V+S+
Sbjct: 606 EGSLIDAQGRVNALHQETNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSY 651
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKW 788
G++G +++ + GN W
Sbjct: 652 GQRGVLLR----------KAGNHAW 666
>gi|418614027|ref|ZP_13177017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
gi|374821896|gb|EHR85937.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
Length = 782
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 298/624 (47%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++N+ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT + + D + + + Q+D + A+A
Sbjct: 226 IEPNSVVEMNNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P + + TIYLP A+HPLL
Sbjct: 286 YARTIKGTKPTF----------------------KEDRTIYLPNAFHPLL---------- 313
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
KD ANT +E V
Sbjct: 314 -DKDTVVANT-------------------------------IEFIDDV----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + + E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K + LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E VK IKQ + K+ + + GD V V S+G+K +
Sbjct: 609 HELIDKKKQLD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQK-GEVL 657
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+EE VVQ+G +K + D+
Sbjct: 658 ELVGEEEAVVQMGIIKMKLPIEDL 681
>gi|366090394|ref|ZP_09456760.1| DNA mismatch repair protein [Lactobacillus acidipiscis KCTC 13900]
Length = 786
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 230/470 (48%), Gaps = 81/470 (17%)
Query: 217 SFKGLLL--SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
SF G + S+SG IEP V LN+ L Q A+ + +L L+E + EIE
Sbjct: 207 SFGGQVYDQSTSGQTLFIEPKQIVALNNRLSQQEAAQKEEVRRILRELSELIAPYTSEIE 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ LD+ NA+A Y+ G + P FL D ++Y
Sbjct: 267 ANAQLLGHLDLANAKAAYAKDLGASEP--FLTDD--------------------DSLYFR 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+A+HPL L P +
Sbjct: 305 QAWHPL------------------------------------------LDPKK------- 315
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + + + ++ITGPNTGGKTI LKT+GL +M +SGL I ++E +++ F
Sbjct: 316 ---AVKNDIMLGKDFKTMLITGPNTGGKTITLKTIGLIQLMGQSGLFIPANEGSRICIFA 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ Q+LSTFS H+ I + + Q + +SLVL DE+G+GT+P EG AL +++
Sbjct: 373 EIFADIGDEQSIEQNLSTFSSHMTNIVDFLDQISPRSLVLFDELGSGTDPQEGAALAIAI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ A GS + +ATTH+ ELK Y NA +EFD LKPTYK+L G+PGRS+A+
Sbjct: 433 LDDVAAKGSYV-VATTHYPELKVYGYERPETVNASVEFDSSTLKPTYKLLIGIPGRSNAL 491
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
+I+ RLGLP ++ +A QL S ++N +I ++ + + E + +L+ S LH
Sbjct: 492 DISRRLGLPQTIIDSATQLVSKDSQDLNNMIGDLVQKRHDAEEEKIQTHKYLVESEQLHS 551
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
+L K QR + ++K A + K A Q+ Q R
Sbjct: 552 DL----EKAYAALNDQRDKLLEKAKQKANDTVAETTKKADQIIADLRQLR 597
>gi|420161043|ref|ZP_14667814.1| MutS family DNA mismatch repair protein [Weissella koreensis KCTC
3621]
gi|394745793|gb|EJF34611.1| MutS family DNA mismatch repair protein [Weissella koreensis KCTC
3621]
Length = 806
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 274/581 (47%), Gaps = 108/581 (18%)
Query: 218 FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S G IEP V LN+ L++A+ E VL L+ +Q DEI +
Sbjct: 217 FGGVVHDQSQTGQTLYIEPAPVVDLNNRLKEAQLKERAEEAQVLHDLSAALQPYQDEILE 276
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ LD VNA+A Y++ P + P E I L +
Sbjct: 277 NAKVLGHLDFVNAKALYAIDLKAVQPE------------YSP----------EQHIRLLQ 314
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPLL Q+
Sbjct: 315 ARHPLLDQK--------------------------------------------------- 323
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
V DI + +++TGPNTGGKTI LKT+GL +MA+SGL I + EY+ V FD+
Sbjct: 324 -QAVANDIILGEDYTAIIVTGPNTGGKTITLKTLGLLQIMAQSGLFIPADEYSTVGIFDN 382
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I +I+ + T SLVL DE+GAGT+P EG AL M++L
Sbjct: 383 IFADIGDEQSIEQSLSTFSSHMVNIVDILDKMTPNSLVLFDELGAGTDPQEGAALAMAIL 442
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+A G+ T+ATTH+ ELK Y+ NA MEFD L+PTY+ + G+PGRS+A+
Sbjct: 443 DAVGAIGA-YTVATTHYPELKVYGYNRVDTINASMEFDVETLRPTYRFMIGIPGRSNALE 501
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I++RLGL ++ A QL S E+N++I ++ + + E L L+R
Sbjct: 502 ISKRLGLSENIIDQASQLTSDDSQELNDMIQDLVDKRNLVTKQKIELEQQLQLNRVKTNQ 561
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L + KI A+ K QK A +V +S Q+ A + +H+ +Q
Sbjct: 562 LDQATEKIAVEQATM-LEKAQK------EANHIVAESRQK----ADRIIDDLHRLQRQ-- 608
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
V +NQ + ++ + TA ++ I + + K+ VG
Sbjct: 609 --------GGNVKENQIIDAKG----ALNALRQEPTAENN---RILRRAKAKKQVNIEVG 653
Query: 756 DLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +G++GT++ K++ K E VQ+G +K ++ +I
Sbjct: 654 DTVLVPEYGQQGTILRKLKDGKYE--VQIGILKMVLPGAEI 692
>gi|258515602|ref|YP_003191824.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779307|gb|ACV63201.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 786
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 221/397 (55%), Gaps = 31/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+ + + ++ L+ITGPNTGGKT+ LKT+GL V+MA+SGLHI + ++ F+ VFA
Sbjct: 315 VPVSVHLGKEFDSLIITGPNTGGKTVTLKTIGLLVLMAQSGLHIPAESSSETGIFEQVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I++QS + SLVL+DE+GAGT+P EG AL ++LE
Sbjct: 375 DIGDEQSIEQSLSTFSSHMSNIVSILNQSGAGSLVLMDELGAGTDPTEGAALAQAILEKL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E + + +ATTH+ ELK Y++ ENA +EFD + LKPTY++L G PGRS+A IA
Sbjct: 435 HEQKAKI-VATTHYSELKNFAYAHRRVENASVEFDPISLKPTYRLLIGKPGRSNAFEIAL 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL VV AR EI+E+++ +E+ + E E R +L ++ K L+
Sbjct: 494 RLGLEPGVVSRARDFLTTEQIEISELMLRLEKERQAAEE---EKRIAELLRQDAEK--LK 548
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R LE ++ + ++ A A V + Q+ + + R ++ + +L+ A
Sbjct: 549 ARYTELEQMLREKREDI--LAKAHEEASKTVKNTRQEAEEAIKEFRGMLQENDNRLKEMA 606
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G + + P + VV PR EL +G+ V
Sbjct: 607 VQEVRNKIKGMQGRLRKA------------PEKSHGGVV------PR----ELL-IGEEV 643
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + ++G V+ V +E +VQVG MK M D+
Sbjct: 644 FIPNLNQQGYVLNVSTDGKEALVQVGIMKLNMPVKDL 680
>gi|255099823|ref|ZP_05328800.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-63q42]
gi|255305708|ref|ZP_05349880.1| putative DNA mismatch repair protein [Clostridium difficile ATCC
43255]
Length = 792
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|339635048|ref|YP_004726689.1| MutS2 family protein [Weissella koreensis KACC 15510]
gi|338854844|gb|AEJ24010.1| MutS2 family protein [Weissella koreensis KACC 15510]
Length = 798
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 274/581 (47%), Gaps = 108/581 (18%)
Query: 218 FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S G IEP V LN+ L++A+ E VL L+ +Q DEI +
Sbjct: 209 FGGVVHDQSQTGQTLYIEPAPVVDLNNRLKEAQLKERAEEAQVLHDLSAALQPYQDEILE 268
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ LD VNA+A Y++ P + P E I L +
Sbjct: 269 NAKVLGHLDFVNAKALYAIDLKAVQPE------------YSP----------EQHIRLLQ 306
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPLL Q+
Sbjct: 307 ARHPLLDQK--------------------------------------------------- 315
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
V DI + +++TGPNTGGKTI LKT+GL +MA+SGL I + EY+ V FD+
Sbjct: 316 -QAVANDIILGEDYTAIIVTGPNTGGKTITLKTLGLLQIMAQSGLFIPADEYSTVGIFDN 374
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I +I+ + T SLVL DE+GAGT+P EG AL M++L
Sbjct: 375 IFADIGDEQSIEQSLSTFSSHMVNIVDILDKMTPNSLVLFDELGAGTDPQEGAALAMAIL 434
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+A G+ T+ATTH+ ELK Y+ NA MEFD L+PTY+ + G+PGRS+A+
Sbjct: 435 DAVGAIGA-YTVATTHYPELKVYGYNRVDTINASMEFDVETLRPTYRFMIGIPGRSNALE 493
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I++RLGL ++ A QL S E+N++I ++ + + E L L+R
Sbjct: 494 ISKRLGLSENIIDQASQLTSDDSQELNDMIQDLVDKRNLVTKQKIELEQQLQLNRVKTNQ 553
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L + KI A+ K QK A +V +S Q+ A + +H+ +Q
Sbjct: 554 LDQATEKIAVEQATM-LEKAQK------EANHIVAESRQK----ADRIIDDLHRLQRQ-- 600
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
V +NQ + ++ + TA ++ I + + K+ VG
Sbjct: 601 --------GGNVKENQIIDAKG----ALNALRQEPTAENN---RILRRAKAKKQVNIEVG 645
Query: 756 DLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +G++GT++ K++ K E VQ+G +K ++ +I
Sbjct: 646 DTVLVPEYGQQGTILRKLKDGKYE--VQIGILKMVLPGAEI 684
>gi|389819500|ref|ZP_10209368.1| MutS2 protein [Planococcus antarcticus DSM 14505]
gi|388463298|gb|EIM05662.1| MutS2 protein [Planococcus antarcticus DSM 14505]
Length = 786
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 277/576 (48%), Gaps = 115/576 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP V N+E+++ + + + +LL L+ ++Q E+ ++ + ++
Sbjct: 219 SSSGQTLFIEPDVVVQANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFLLVEVLGEI 278
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D++ A+A Y + GT P + E I L KA HPL+
Sbjct: 279 DLILAKAKYGAAHKGTKPTM----------------------NTEGYINLQKARHPLI-- 314
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
K + D+E +GG+
Sbjct: 315 ---PKDEVVPNDIE-----------FGGDIT----------------------------- 331
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+VITGPNTGGKT+ LKTVGL+ +MA+SGL + + + +++ FD +FADIGDE
Sbjct: 332 -------AIVITGPNTGGKTVTLKTVGLSTLMAQSGLPVPALDGSELSVFDQIFADIGDE 384
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+++ SLV+ DE+GAGT+P EG AL +SLL+ G+
Sbjct: 385 QSIEQSLSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGA 444
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ IATTH+ ELK Y+ NA +EFD L PTY++L GVPGRS+A I++RLGLP
Sbjct: 445 RV-IATTHYPELKAYGYNRPGVANASVEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLP 503
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++ +A+ G S ++ +I +E+ + + + + + L S L K L K
Sbjct: 504 EHIINHAKSFTGTDSKAVDSMIASLEKSRREAEQDAEQTKKILSESEQLKKELA----KQ 559
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
LE Q+ R +K A AR +V ++ + S R + QL S+S H
Sbjct: 560 LEEYEQQKERLEEK---AKEKARKIVGQARVEAEAVISDLRKM------QLNQSSSVKEH 610
Query: 704 CTKVGKN--QHVLTSN--FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 759
K ++ L N ++ D E P A+ D V
Sbjct: 611 ELIDAKKRLENALPQNRILKKAAKDNAEKPLKAN----------------------DEVK 648
Query: 760 VSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V SFG+KGT+++ + SK E +VQ+G +K + +D+
Sbjct: 649 VISFGQKGTLVE-KVSKNEWIVQIGILKMKLPESDL 683
>gi|365905349|ref|ZP_09443108.1| MutS family DNA mismatch repair protein [Lactobacillus
versmoldensis KCTC 3814]
Length = 784
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 213/785 (27%), Positives = 362/785 (46%), Gaps = 156/785 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGR-----------EATLTQLWSINQTYQDSLRLLDET 100
++L VLE+DK+ ++ + TS G+ E+ + +L + D +RL E
Sbjct: 4 KALSVLEFDKIKDEIAKYLITSRGKTLLKKLMPMSVESIVHRLIDQTKDGMDIVRLKGEI 63
Query: 101 ---------NAAIEMQKHGSCSLDLTGVDLSLVKSAIR---EVRRASPLRPNEALAVVAL 148
+ A ++K G+ L G +L+ + ++ E+++ ++ + + L
Sbjct: 64 PVRKLDDLHDQANRLKKDGN----LNGTELAAIGQVLKNTSELKQFFETMHDDEITLREL 119
Query: 149 LQFSETL----QLSLR--AAIKEDADL---------YIR--FMPLTQMLYQLMDMLIRNE 191
S+ L QL+ R ++ E L YIR L + M+ R +
Sbjct: 120 YNLSDKLIDNPQLTKRINQSVDESGRLLDTASDDLGYIRNQINKLNDQIRHSMEQFTRGK 179
Query: 192 NNESLFLEVSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQA 247
+ L + ++ R + + + F G++ S G IEP S V +N++L A
Sbjct: 180 GTKYLTEAIVTLRDDRFVVPVKTEYRAKFGGVVHDQSASGQTLYIEPQSVVGMNNQLHDA 239
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQ 307
+ S E +L L++ ++ D+ +I + + D++NA+A Y+ T
Sbjct: 240 QTSERLEEIKILGELSDLVRPDISDILNNNEVLAEFDLINAKAKYANQIKAT-------- 291
Query: 308 DMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRK 367
EP+ S R+ + L +A HPL+
Sbjct: 292 --------EPLVS------RDNIVDLKQAKHPLI-------------------------- 311
Query: 368 LYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLK 427
P ++ V DI I + ++ITGPNTGGKTI +K
Sbjct: 312 ----------------DPDKI----------VANDIKIGDDYKTMLITGPNTGGKTITMK 345
Query: 428 TVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQS 487
T+GL +MA++GL I + E + V FD VF DIGDEQS+ Q+LSTFS H+ I NI+
Sbjct: 346 TLGLIQIMAQAGLFIPAHEESHVAVFDEVFVDIGDEQSIEQNLSTFSSHMDNIINIMKNV 405
Query: 488 TSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFEN 547
T +SLVL+DE+GAGT+P EG A+ +++LE ++S + +ATTH+ ELK Y+ N
Sbjct: 406 TDKSLVLIDELGAGTDPQEGAAIAIAILEELSKSDCEI-MATTHYPELKIYAYNTQDTIN 464
Query: 548 ACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIE 607
A MEFD+ LKPTY++L G+PG S+A NIA RLG+ VV+ + L S ++N +I +
Sbjct: 465 ASMEFDDKSLKPTYRLLIGIPGASNAFNIASRLGMNSSVVERGKSLMSGESQDLNNMISD 524
Query: 608 MERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARS 667
+E + +F + + L + L KN +++ E +QR +++K D+ A
Sbjct: 525 LENRRKEFENNNQK------LEQQLAKN-----KEVEEDYENQR-DQLEKSKDSEIKAAK 572
Query: 668 LVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVE 727
+ A Q+ S + + ++L S K+ ++++ + + E
Sbjct: 573 I---RANQIVSSTKKKTEKIIDHLKELERSGVAV-------KDDQIISARTDLKNLHQDE 622
Query: 728 HPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
AT + V++ R K+ + VGD V +G+ GT+I+ + + VQ+G +K
Sbjct: 623 --ATKKNRVLR------RAKKRQQLKVGDEVKAIPYGQIGTIIR-KNKDNQYEVQLGILK 673
Query: 788 WIMKF 792
MKF
Sbjct: 674 --MKF 676
>gi|352095971|ref|ZP_08956918.1| MutS2 protein [Synechococcus sp. WH 8016]
gi|351677327|gb|EHA60476.1| MutS2 protein [Synechococcus sp. WH 8016]
Length = 805
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 197/338 (58%), Gaps = 25/338 (7%)
Query: 410 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 469
RV+ ITGPNTGGKT+ LK++GLA +MA++G+ I +PW V ADIGDEQSL QS
Sbjct: 348 RVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCKGSPSLPWCAQVLADIGDEQSLQQS 407
Query: 470 LSTFSGHLKQIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLT 526
LSTFSGH+K+IG+I I+ S +LVLLDE+GAGT+P EGTAL ++LL A + LT
Sbjct: 408 LSTFSGHVKRIGSILQSIASGPSPALVLLDEVGAGTDPSEGTALAIALLRNLANC-ARLT 466
Query: 527 IATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIV 586
IATTH GELK LKYS+ FENA + FD L PTY++LWG+PGRS+A+ IA RLG V
Sbjct: 467 IATTHFGELKALKYSDSRFENASVAFDSDTLSPTYQLLWGIPGRSNALAIATRLGFDSDV 526
Query: 587 VQNARQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILE 645
++ ARQL + ++N VI +E + + +A L + LH+ LL+ + +
Sbjct: 527 IEQARQLLKPSGDGDVNAVIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWEQQRK 586
Query: 646 HCASQ----RFRKVQKISDAAAIARSLV-------------HKSAQQLCPSASQARSLVH 688
+ A Q R R I D R L+ ++ Q+L S RS+
Sbjct: 587 NSAQQQELGRQRLESSIRDGQKEVRHLIRRLRDQKADGETARRAGQRLRKLESNHRSVPE 646
Query: 689 KRAQ-QLRPSASQSLHCTKVGKNQHVL--TSNFQQTTV 723
+R + RPS + + + K VL + + QQ +V
Sbjct: 647 RRHHPEWRPSVGERIRLLALDKAAEVLEVSDDGQQLSV 684
>gi|241896574|ref|ZP_04783870.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
gi|241870166|gb|EER73917.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
Length = 795
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 272/527 (51%), Gaps = 56/527 (10%)
Query: 285 VVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV-TSKVSSSEREWTIYLPKAYHPLLLQ 343
V+ +ATY FGG I ++L EP +++ RE+T+ + +L++
Sbjct: 198 VLPVKATYRQKFGGV---IHDQSQTGQTLYIEPADVVDMNNRLREYTLKERREEERVLIE 254
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPS---EMQVSALELAHP-- 398
Q +A D N +L + AR + P E V L+ HP
Sbjct: 255 LSAQLEPEA--DSIENNAQLLGHLDFLNAKARYAVVIKAIEPEFSPENHVRLLKARHPLL 312
Query: 399 -----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
VP DI I +++TGPNTGGKTI LKT+GL +MA+SGL I ++EY+ V F
Sbjct: 313 NPDKVVPNDIIIGEDYSAIIVTGPNTGGKTITLKTLGLLQIMAQSGLFIPAAEYSSVGIF 372
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
+FADIGDEQS+ QSLSTFS H+ I +I+S + SLVL DE+GAGT+P EG AL M+
Sbjct: 373 KEIFADIGDEQSIEQSLSTFSAHMVNIIDILSGTDKDSLVLFDELGAGTDPQEGAALAMA 432
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
+L+A E+G+ ++ATTH+ ELK Y+ NA MEFD L+PTYK L GVPGRS+A
Sbjct: 433 ILDAVGETGA-YSVATTHYPELKVYGYNRADTINASMEFDIDSLRPTYKFLIGVPGRSNA 491
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH 633
+ IA++LGL ++ +A L S E+N++I ++ + L E ++ +R L
Sbjct: 492 LEIAKKLGLDKNIIDSASALTTEDSQELNDMIADLVARRNAVLTQQVELTQKVIENRQL- 550
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV----HK 689
KN ++ LE +R + V++ K A + A + + HK
Sbjct: 551 KNDYESK---LESIDKERAKAVEE-----------AKKEANHIVADARRKTDKIIADLHK 596
Query: 690 RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
A+ ++ K+ + L + Q+ P+ ++ +++ KQ+ +V
Sbjct: 597 MARD-----GAAIKENKLIDAKGALNAMHQE--------PSATNNRILRKAKQAKQVPLL 643
Query: 750 ELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFTDI 795
VGD V V +G++GT++ K++ K E VQ+G +K ++ +I
Sbjct: 644 ----VGDTVLVREYGQQGTIVRKLKDHKFE--VQMGILKMVLTSEEI 684
>gi|350269070|ref|YP_004880378.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
gi|348593912|dbj|BAK97872.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
Length = 795
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 218/802 (27%), Positives = 336/802 (41%), Gaps = 169/802 (21%)
Query: 47 SRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTY-QDSLRLLDETNAAIE 105
S + +S+R LE L ++ A ++ EA L +T ++ LRLLD+T+AA E
Sbjct: 2 SELFEKSMRTLE---LPQVLTLLAAQAVSDEAKRRALALTPETEPEEVLRLLDQTDAARE 58
Query: 106 MQK-HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIK 164
M GS S L V+ A+ R L E L + LL + + A
Sbjct: 59 MIGLRGSPSFS----GLKPVREALDRADRGGGLNTRELLTIAGLLTAARRTREYFNADTG 114
Query: 165 EDADLYIRFMPL--TQMLYQLMDMLIRNEN------------------------------ 192
E + + F+ L + L + +I +E+
Sbjct: 115 EKSAIDHLFLSLHGNRFLEDRIKSVILDEDTISDNASPELNDIRRKMRAAQAKSRQVLQR 174
Query: 193 -----------NESLFLEVSSIHGRLCIRTGADQ-LSFKGLL--LSSSGIGSVIEPLSAV 238
ESL ++ GR + A+Q + GL+ +SS+G +EP+ V
Sbjct: 175 IISSPSYSKVLQESL---ITQRDGRFVVPVKAEQKAALPGLVHDVSSTGATLFVEPMGVV 231
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 298
N+E + A K E +L L+ ++I+ + ++ LD++ AR S G
Sbjct: 232 QANNEYIELEAREKKEIERILAELSADAANHREDIQWDYDALVHLDLIFARGQLSYKLDG 291
Query: 299 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 358
P I R+ I L KA HPL
Sbjct: 292 VRPEI----------------------RRDGAIVLRKARHPL------------------ 311
Query: 359 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 418
L+ A VPIDI + LVITGPN
Sbjct: 312 ----------------------------------LDRAKAVPIDIELGDSFDTLVITGPN 337
Query: 419 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 478
TGGKT+ LKT+GL +MA+ GLHI ++ +++ ++ V AD+GDEQS+ QSLSTFS H+
Sbjct: 338 TGGKTVSLKTLGLLTLMAQCGLHIPAASGSQISVYERVLADVGDEQSIEQSLSTFSAHMT 397
Query: 479 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 538
I I+ ++ ++LVL DE+GAGT+P+EG AL +++++ G+ L ATTH+ ELKT
Sbjct: 398 SIVRILQETDQRTLVLFDELGAGTDPVEGAALAIAIIQQVRRFGAKLA-ATTHYAELKTF 456
Query: 539 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 598
+ ENA EFD L+PTY++L G+PG+S+A I+ RLGLP VV++A+ S
Sbjct: 457 AMTTAGVENASCEFDVESLQPTYRLLIGIPGKSNAFAISRRLGLPDDVVEDAKAQMAGDS 516
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 658
+V+ ++E+ K Q LE L R R R +E
Sbjct: 517 VRFEDVLTQLEQ-KRQALEKKQVEVDRLYQQREEDARKGREFRTQMERARDN-------- 567
Query: 659 SDAAAIARSLVHKSAQQLCPSASQA-----RSLVHKRAQQLRPSASQSLHCTKVGKNQHV 713
ARS A+++ A A L R QQ + A+Q+L+ + + +
Sbjct: 568 ------ARSRGEADARRILRDAKAAADQTMNELAELRRQQAKADAAQNLNEAQAAIRRGL 621
Query: 714 LTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVE 773
+ + + + P S ++ Q E+P V L V S GK G
Sbjct: 622 NEAEEKLRSREFAPEPIPRPSRPIQKGDQ------VEIPGVKTLAEVVSVGKDGV----- 670
Query: 774 PSKEEIVVQVGNMKWIMKFTDI 795
+ +Q G MK +K ++
Sbjct: 671 -----LQLQAGRMKMTVKANEV 687
>gi|269926462|ref|YP_003323085.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790122|gb|ACZ42263.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 794
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 221/405 (54%), Gaps = 42/405 (10%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VPI IF+ RVLVITGPNTGGKT+ LKT GL +MA SGLH+ +SE A+V
Sbjct: 315 HPLLGRDVVPITIFLGGDFRVLVITGPNTGGKTVALKTTGLLSLMALSGLHLPTSERARV 374
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
P + ADIGDEQS+ QSLSTFS H+ I ++ + +L+LLDE+GAGT+P EG A+
Sbjct: 375 PVLKYILADIGDEQSIEQSLSTFSSHVINIKKMLEVAGPDTLLLLDELGAGTDPEEGAAI 434
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
++++ E +L+ +ATTH+ E+K + NA +EFD L PTY++ G+PGR
Sbjct: 435 AEAIIDYLLEKRALV-VATTHYPEIKVYAQTTPGVTNAAVEFDLETLSPTYRLTIGLPGR 493
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR 630
S AI+IA+RLGLP +V++ A+ S N+++ ++E K + + EA
Sbjct: 494 SYAIDIAQRLGLPKVVIEAAKSRVSPESRAANDLLEQIEAEKKLADQRLAEAEQI----- 548
Query: 631 NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR 690
RR+ E R R ++ +A I + + QQ R + +
Sbjct: 549 ---------RREAEE----LRSRAAAELQEAERIREQALEEGYQQALRELEDVRREIDEV 595
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
++L SASQ+ +K+G+ L + V+ VE S+ K P V R
Sbjct: 596 RRRL--SASQA--ASKLGEIADALRA------VENVERRVRKSTRGSK----RPSVIR-R 640
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
LP VGD V + SFG +G V+ + S E VQVG+++ + +D+
Sbjct: 641 LPQVGDSVRIKSFGTEGKVLSISDSTAE--VQVGSLRSRVPLSDL 683
>gi|422759830|ref|ZP_16813592.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412665|gb|EFY03573.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 778
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 229/400 (57%), Gaps = 43/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NVKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+ + S ++N +I ++ER + L+H+ E N
Sbjct: 486 EIARRLGLAEHIVKEAQTMTDTDS-DVNRIIEQLERQTLESRKRLDHIREVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K A AR +V + L S S L K A
Sbjct: 540 LKFN--RAVKKLYNEFSQAKDKEIEK---ATLEAREIVDLA---LAESDSILNQLHDKAA 591
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
L+P H K Q +Q +K + + + V+K + K+
Sbjct: 592 --LKP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRA 627
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|261408901|ref|YP_003245142.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
gi|261285364|gb|ACX67335.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
Length = 789
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + +++TGPNTGGKT+ LKT+GL +MA SGL I + E +++ FD+++A
Sbjct: 317 VPLDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+SQ T +SLVLLDE+GAGT+P EG+AL +S+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIIRILSQMTPKSLVLLDEVGAGTDPAEGSALAISILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + IATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRMGCRM-IATTHYSELKAYAYERKGVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLPG +++ AR EV E +R + + + E RH + R + +
Sbjct: 496 RLGLPGSILEFAR----------GEVKEEDQRVE-HMIASLEENRHTAEVEREKAEQV-- 542
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
RK +E + +++QK+ + LV K+ + +ARS + LR A
Sbjct: 543 --RKEMEELRQRHQQELQKLEEQKD---KLVDKARAEARQIVDKARSEAEEIIADLRKIA 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ K +H L + ++ +D E + + KQ +R+ P GD V
Sbjct: 598 QEEGASVK----EHKLIAARKR--LDDAEPQQGKKTGGQRSAKQ----QRSIEP--GDEV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S +KG V+++ SK E VVQ+G MK + D+
Sbjct: 646 RVYSLNQKGHVVEMSGSK-EAVVQLGIMKMKVALDDL 681
>gi|157412576|ref|YP_001483442.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9215]
gi|157387151|gb|ABV49856.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9215]
Length = 810
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 295/624 (47%), Gaps = 148/624 (23%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L +SSF+ T +G+ A L + I Y+ S RLL+ET E++ +
Sbjct: 26 ESISLLEWDSLKVHLSSFSSTEMGKRAILG--FGIPSEYELSKRLLNETVEINELENNLD 83
Query: 112 CSLDLTGV-DLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
S+ + V D+S R E + ++ SE L+++ I +L
Sbjct: 84 KSISFSNVFDIS---------------RNIEICSKGGVISSSELLEIA--KTIAAARNLK 126
Query: 171 IRFMPLTQMLY--QLMDMLIRNENNESLFLEVSSIHGRLC-------------------- 208
F+ Q Y L+ ++N E++F +GR+
Sbjct: 127 KIFLDFEQRPYISSFTKNLLDHQNVETIFKRGIESNGRISDNASNELSVLRKELLSKKLE 186
Query: 209 ----------------------IRTGADQLSFK--------GLLLSSSGIGSVI--EPLS 236
R G L+ K G++ SS G+ + EP S
Sbjct: 187 RKILVEKFIQKNLAYLQDTTIGDRNGRPVLAVKVNYVIKFKGIIHDSSSSGNTVYFEPES 246
Query: 237 AVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSF 296
V +++ A +T E +L ++ + + + + +M + +++L+ R+ YS
Sbjct: 247 VVTKGNKIASLEARITAEEFKLLKKWSQIVSDNSENLIEMASILLRLENALTRSRYSKWI 306
Query: 297 GGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
GG +P + P+ S V S HPLL+ +HK+K
Sbjct: 307 GGKTP----------TFEKNPIISLVGFS------------HPLLIWEHKKKG------- 337
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
+P PV +D I R +V+ ITG
Sbjct: 338 ---------------------------APP-----------PVAVDFHINRNIKVVAITG 359
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKT LK +GL+++MA++GL I S+ +P+ +++ DIGD QSL ++LSTFSGH
Sbjct: 360 PNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSGH 419
Query: 477 LKQIGNIISQSTSQ---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHG 533
+ +I I+ ++ S+VLLDEIG+GT+PLEG+AL M+LL+ FA S +T+ATTH+G
Sbjct: 420 ISRIKEILDSLNNKRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANK-SDITLATTHYG 478
Query: 534 ELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQ 592
++K LKY++ FEN + FDE LKP Y + WG+PGRS+A++I++R+GL I+ + A
Sbjct: 479 DIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENILNEAANY 538
Query: 593 LYGAASAEINEVI--IEMERFKTQ 614
L INE+I +E ER K Q
Sbjct: 539 LRPKEVDNINEIIKGLEEERIKQQ 562
>gi|327475225|gb|AEA77207.1| MutS2 [Bacillus aquimaris]
Length = 786
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 278/572 (48%), Gaps = 105/572 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP + V LN++L++ R E +LLAL+ ++Q +E+ +++ + +
Sbjct: 217 SSSGQTLFIEPEAIVALNNQLRELRLKEQTEIEKILLALSVEVQEAAEELLLIVSILSDV 276
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + +A + S G+ P I E I L KA HPL
Sbjct: 277 DFMFTKAKFGRSIKGSKPII----------------------NNEGRIKLNKARHPL--- 311
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L + V DI
Sbjct: 312 -------------------------------------------------LPIEEAVANDI 322
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ ++ +VITGPNTGGKT+ LKT+GL MMA++GL I + + ++V F S++ADIGDE
Sbjct: 323 ELGKEFSSIVITGPNTGGKTVTLKTLGLTNMMAQAGLPIPALDDSEVGIFRSIYADIGDE 382
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ + +SLVL DE+GAGT+P EG AL +S+L+ G+
Sbjct: 383 QSIEQSLSTFSSHMVNIVEILEKVDHESLVLFDELGAGTDPQEGAALAISILDEVHGKGA 442
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++RLGL
Sbjct: 443 RV-VATTHYPELKAYGYNREGVVNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLS 501
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V+ A+ G + E+ +I +E + Q + + EA L + +HK++ ++++
Sbjct: 502 DSVILRAKSHIGTDTKEVENMIASLEENRRQGEKELEEAHELLRQAEKMHKDM---QKQM 558
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+E+ +K Q A A LV K+ ++ R + +++ Q++ + +H
Sbjct: 559 MEYYE----KKDQLYEKAQLKASDLVEKAKEEADQVIKDLRRMQKEKSAQIKE--HELIH 612
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
K ++ T P SSV K + + ++ GD V V SF
Sbjct: 613 AKK----------QLEEAT------PKLKKSSVQKSKGNNGK----QVLKAGDEVKVLSF 652
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+KG +I+ SK E VQ+G MK +K +D+
Sbjct: 653 DQKGHLIEKVSSK-EWQVQMGIMKMKVKESDL 683
>gi|417927758|ref|ZP_12571146.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
gi|340765632|gb|EGR88158.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
Length = 778
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 226/397 (56%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVTVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL +V+ A+ + S ++N +I ++E+ E+R L R + +
Sbjct: 486 EIARRLGLAEHIVKEAQNMTDTDS-DVNRIIEQLEK-------QTLESRKRLDYIREVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K ++I A AR +V + L S S L K A L
Sbjct: 538 DNLKFNRAVKKLYNEFSQAKDKEIEKATLEAREIVDLA---LAESDSILNQLHDKAA--L 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K Q +Q +K + + + V+K + K+ P V
Sbjct: 593 KP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRAPRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 631 GDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|260437715|ref|ZP_05791531.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292809738|gb|EFF68943.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 791
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 213/399 (53%), Gaps = 32/399 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+DI++ L+ITGPNTGGKT+ LKT+GL +M +SGLHI +S+ +K+ F+ +FA
Sbjct: 315 VPVDIYLGDGYEQLIITGPNTGGKTVTLKTIGLFSLMGQSGLHIPASDNSKLTVFNDIFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I I+ ++ S SLVL DE+ AGT+P EG AL +S+L
Sbjct: 375 DIGDEQSIEQSLSTFSSHMKNIVYILKKADSNSLVLFDELCAGTDPTEGAALAISILRTL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
S + TIATTH+ ELK S D ENAC EFD L PTY++L G+PG+S+A I+
Sbjct: 435 -HSKKITTIATTHYSELKIYALSTDGVENACCEFDVASLAPTYRLLIGIPGKSNAFAISG 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP +++NA+ G ++ +VI ++E+ + + E + L KN L+
Sbjct: 494 KLGLPSEIIENAKANIGTSAKAFEDVISDLEKSRVTIEKEQAEIELYKKEIEEL-KNRLK 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ + L+ + K ++ +A AI R +A+ + + +A
Sbjct: 553 IKTERLDEKSDSIIEKARE--EADAILR---------------EAKETADETIRDFNKAA 595
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEH-PATASSSVVKDIKQSPRVKRTELPNVGDL 757
+ + + + ++T K + P S+ D ++GD
Sbjct: 596 KNGMTIQDLEAGRERIRKQLEKTNAKKAANKPVQTSNHTAADF------------HIGDK 643
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
VHV S GTV + SK + V +G + + D++
Sbjct: 644 VHVISMDLDGTVHTLPDSKGFLTVSMGILNSKVNIKDLI 682
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 142/334 (42%), Gaps = 50/334 (14%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
++L +LE+DK+ +S +A ++ G+ + S + Y +R ++ A +
Sbjct: 4 KALSILEFDKITERLSKYATSAPGKVLCRKLMPSTDLDY---IRKCEQDTTAASSRIFAK 60
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD-LY 170
SL +G L+ ++ I+ + S L +E L+V ALL + + +I+ + D L
Sbjct: 61 GSLGFSG--LTDIRPLIKSLEVGSSLGISELLSVAALLSVTGSAIRYDSNSIETNTDVLS 118
Query: 171 IRFM---PLTQMLYQ------------------LMDMLIRNEN-NESLFLEVSSI----- 203
RF PL+ +L + L D+ + +N NE + E+S +
Sbjct: 119 ERFNMLNPLSDILNEINRCIISETEIADDASTNLKDIRRQQKNVNERIKSELSHMISGSY 178
Query: 204 ------------HGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
GR C+ A+ S G++ S GS IEP+S V LN++L++
Sbjct: 179 RTYLQDAVVTTRDGRYCVPVKAEYRSQVPGMIHDQSNTGSTFFIEPMSIVKLNNDLRELE 238
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
++ +L +L+ E+ + + +LD + A+A +S S+ G+ P +
Sbjct: 239 IKESEEISVILSSLSAMAGNYTTELLTNYDILKELDFIFAKAGFSHSYKGSEPIMDCDGK 298
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
+ P+ SS IYL Y L++
Sbjct: 299 INIKKGRHPLID--SSKVVPVDIYLGDGYEQLII 330
>gi|408402357|ref|YP_006860321.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407968586|dbj|BAM61824.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 778
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 226/397 (56%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL +V+ A+ + S ++N +I ++E+ E+R L R + +
Sbjct: 486 EIARRLGLAEHIVKEAQNMTDTDS-DVNRIIEQLEK-------QTLESRKRLDYIREVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K ++I A AR +V + L S S L K A L
Sbjct: 538 DNLKFNRAVKKLYNEFSQAKDKEIEKATLEAREIVDLA---LAESDSILNQLHDKAA--L 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K Q +Q +K + + + V+K + K+ P V
Sbjct: 593 KP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRAPRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 631 GDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|255654753|ref|ZP_05400162.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-23m63]
gi|296449499|ref|ZP_06891276.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296878178|ref|ZP_06902193.1| exopolyphosphatase [Clostridium difficile NAP07]
gi|296261563|gb|EFH08381.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296430931|gb|EFH16763.1| exopolyphosphatase [Clostridium difficile NAP07]
Length = 792
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTTDSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + + + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIERLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|256751292|ref|ZP_05492172.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749847|gb|EEU62871.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 791
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/624 (28%), Positives = 293/624 (46%), Gaps = 139/624 (22%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGS 111
+++ LE+DK+ + + + LG++ I + ++ R LD N AI + +G
Sbjct: 9 AIKSLEFDKIVEFIVGYCDSDLGKQKASD--IVIKKDIEEIERELDLLNEAISFISSYGG 66
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
S + + I++ + S L E L + L ++ + +++D ++
Sbjct: 67 ISFAFEDI-----RDYIKKAQIDSVLYNQELLKIKKFLNLVSKIKGYFKNL--QESDRFV 119
Query: 172 RF-------MPLTQMLYQLMDMLIRNEN-------------------NESLFLEVSSI-- 203
R +P+ + ++ +++I + NE + ++SI
Sbjct: 120 RLKEYDKKVLPIKNLEKRIENIIISEDEIADDASPMLKSLRRQKLSINEKIRATLNSIIS 179
Query: 204 --------------HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
GR + + S FKG++ SSSG IEP+ V LN+EL+Q
Sbjct: 180 TRQKELQEPIITVRQGRYVVPVKQEYRSTFKGIVHDQSSSGATLFIEPMQVVDLNNELRQ 239
Query: 247 ARASVTKAEEDVLLALTEKM----QVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
+ + +L L++++ Q+ D+IE + + LD + A+A YSL P
Sbjct: 240 VELKEKQEIQRILFELSQEVKKYSQILFDDIEIVSD----LDFIFAKAKYSLKLKAVRPE 295
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
+ ++ + I L KA HPL+ Q
Sbjct: 296 L-------NTMGY---------------INLKKARHPLINQ------------------- 314
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
E+ P+ DI+I + LVITGPNTGGK
Sbjct: 315 -------------------------------EVIVPI--DIYIGDQFNTLVITGPNTGGK 341
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKTVGL +MA +GL+I + E ++V F+ VF DIGDEQS+ QSLSTFS H+ I +
Sbjct: 342 TVTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+GAGT+P+EG AL MS+L+ + G+ TIATTH+ ELK
Sbjct: 402 ILQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGA-KTIATTHYSELKQYALKA 460
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
ENA +EF+ LKPTYK++ G+PG+S+A I++RLGLP +++NAR+ + +
Sbjct: 461 PGVENASVEFNVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE 520
Query: 603 EVIIEMERFKTQFLEHVHEARHFL 626
++I ++E K + LE ++ FL
Sbjct: 521 DIIADVES-KRRELEKANQEIAFL 543
>gi|160878313|ref|YP_001557281.1| MutS2 family protein [Clostridium phytofermentans ISDg]
gi|229486372|sp|A9KR74.1|MUTS2_CLOPH RecName: Full=MutS2 protein
gi|160426979|gb|ABX40542.1| MutS2 family protein [Clostridium phytofermentans ISDg]
Length = 796
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 280/595 (47%), Gaps = 107/595 (17%)
Query: 204 HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLL 260
+GR C+ + + +F+G++ S GS IEP++ V LN+EL + + E +L
Sbjct: 198 NGRYCLPIKQEYKNTFQGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILA 257
Query: 261 ALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
L+ + + ++ + +LD + ARA L ++MK S H
Sbjct: 258 ELSNLVATEKYNLKYNQTTLAELDFIFARAG-------------LSKNMKASQPH----- 299
Query: 321 KVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
+ R + I + K HPL
Sbjct: 300 ---FNNRHY-INIKKGRHPL---------------------------------------- 315
Query: 381 TNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
+ P ++ VPIDI+ K +LVITGPNTGGKT+ LKTVGL +M ++GL
Sbjct: 316 --IDPKKV----------VPIDIYFGDKFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGL 363
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + + +++ F+ V+ADIGDEQS+ QSLSTFS H+ +I+ + SLVL DE+GA
Sbjct: 364 HIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILEHANENSLVLFDELGA 423
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL M++L ++ + T+ATTH+ ELK S D NAC EF L+PT
Sbjct: 424 GTDPTEGAALAMAIL-SYLHQRKIRTMATTHYSELKIFALSTDGVSNACCEFSVETLQPT 482
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG+S+A I+ +LGL +++ AR+ G +VI +E + +
Sbjct: 483 YRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFIGTKDESFEDVISNLEASRIAMEKDKA 542
Query: 621 EARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
EA + K + +RK+ E K KI DA + + + A +
Sbjct: 543 EAEQY-------KKEVEELKRKLAE--------KNSKIDDA----KDRILREANE----- 578
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+AR+++ Q+ + A +++ + E SS+V
Sbjct: 579 -KARTIL----QEAKDYADETIRKYNKWGAGGANNKEMENERAALREKLGDTDSSLVSKA 633
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K++ + + VGD VHV S KG+V + +K ++ VQ+G ++ ++ +D+
Sbjct: 634 KKNRKQHKPSDFKVGDSVHVISLNLKGSVSTLPNAKGDLYVQMGILRSLVNISDL 688
>gi|310658450|ref|YP_003936171.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
gi|308825228|emb|CBH21266.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
Length = 793
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 225/404 (55%), Gaps = 45/404 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I I ++ LVITGPNTGGKT+ LKT+GL +MA+SGLH+ + + FD++FA
Sbjct: 319 VPSNINIGKEFDTLVITGPNTGGKTVTLKTIGLFAIMAQSGLHLPTDYGTSICIFDNIFA 378
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I NI+ + LVL DE+GAGT+PLEG AL +S+L+
Sbjct: 379 DIGDEQSIEQSLSTFSSHMTHIVNILDEVKDNCLVLFDELGAGTDPLEGAALAVSILDRL 438
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E L+T+ATTH+ ELK + + ENA +EFD L PTY++L G+PG+S+A I+
Sbjct: 439 REY-KLITVATTHYSELKHYALTTNRVENASVEFDVQTLSPTYRLLIGIPGKSNAFEISR 497
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGL ++ A+ + S + +V+ E++ + Q +E E SR ++++ +
Sbjct: 498 KLGLKEEIILAAKHHLDSDSISMEDVLKEIDDNRKQ-IETEREQ------SRIIYEDAKK 550
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 690
+ ++ E + +K + I +A AR L+ ++ ++ + + R L ++K
Sbjct: 551 LQTRLKEKESKLDTQKDKIIQEAKNEARKLLQQAKEEADEAIKELRELSKRAEKQNINKE 610
Query: 691 AQQLRPSASQSLHCTKVG-KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
+ R SL K G KNQ ++T KD+ +
Sbjct: 611 IEASRRKIKTSLD--KYGYKNQDLITE---------------------KDV-----INPV 642
Query: 750 ELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
++ GD V+V SF K TV+ V+ K+E +VQ+G MK + F+
Sbjct: 643 DIIVAGDEVYVPSFSKNATVVSVDNDKKEALVQIGIMKLNLPFS 686
>gi|386317717|ref|YP_006013881.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410495667|ref|YP_006905513.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|323128004|gb|ADX25301.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410440827|emb|CCI63455.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 778
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 229/400 (57%), Gaps = 43/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+ + S ++N +I ++E+ + L+H+ E N
Sbjct: 486 EIARRLGLAEHIVKEAQNMTDTDS-DVNRIIEQLEKQTLESRKRLDHIREVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K A AR +V + L S S L K A
Sbjct: 540 LKFN--RAVKKLYNEFSQAKDKEIEK---ATLEAREIVDLA---LAESDSILNQLHDKAA 591
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
L+P H K Q +Q +K + + + V+K + K+
Sbjct: 592 --LKP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRA 627
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|399924139|ref|ZP_10781497.1| MutS2 family protein [Peptoniphilus rhinitidis 1-13]
Length = 790
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 286/610 (46%), Gaps = 125/610 (20%)
Query: 192 NNESLFLE---VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQ 245
NN++ +L+ V+ GR + + S +GL+ +SSSG + IEP+S V N+EL+
Sbjct: 182 NNQANYLQDAIVTLRDGRYVVPVKIENKSRVRGLVHDISSSGQTAYIEPMSVVEANNELK 241
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFL 305
+ E +L L+E + + I+ + +I+LD + A+A + + P I
Sbjct: 242 ELYIKENAEIEKILRELSELVAESSEYIKSNQDKLIELDFIFAKARLGIKYHANMPKI-- 299
Query: 306 PQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRR 365
++ I L +AYHP L
Sbjct: 300 --------------------NKDGRINLIRAYHPFL-----------------------D 316
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTIC 425
RK+ VPIDI + L+ITGPNTGGKT+
Sbjct: 317 RKI-----------------------------AVPIDINLGIDFSSLIITGPNTGGKTVS 347
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKTVGL +M + GL I E +++ F+ VFADIGDEQS+ QSLSTFS H+ I +
Sbjct: 348 LKTVGLLSLMTQYGLLIPCEESSEIAIFEKVFADIGDEQSIEQSLSTFSSHMVNIVYTLK 407
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
T SLVL DE+GAGT+P EG AL +++E+ + ++ I+TTH+ +LK + D
Sbjct: 408 NVTKNSLVLFDELGAGTDPTEGAALARAIMESMLKR-NIRCISTTHYNQLKVFALTTDGV 466
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
NA MEFD L PTY++L GVPG+S+A I+ RLGLP +++ +++L + + E +V+
Sbjct: 467 ANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPNEIIEESKKLLSSENIEFEDVL 526
Query: 606 IEMERFKTQFLEHVH----EARHFLMLSRNLH---KNLLRTRRKILEHCASQRFRKVQKI 658
+++ +T+ E+ E R + ++ L +NL R KILE + R +
Sbjct: 527 QSIDKDRTKIREYKEELEREKRDLEIENKKLEGKIRNLEDQREKILEKSREEAKRILLNA 586
Query: 659 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 718
+ I S ++++ + S K+ Q+ + +SL ++ N
Sbjct: 587 KENVDIILSEINEAKDNINSENS-------KKIQEAQDLLRESLKNSR----------NN 629
Query: 719 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 778
+ + K +P +++IK VGD V +S G TVI++ SK
Sbjct: 630 SELEIKKAVNP-------IREIK------------VGDKVR-TSLGNVATVIELPDSKGN 669
Query: 779 IVVQVGNMKW 788
++VQ G MK
Sbjct: 670 VLVQSGIMKM 679
>gi|81428007|ref|YP_395006.1| MutS family DNA mismatch repair protein [Lactobacillus sakei subsp.
sakei 23K]
gi|123564679|sp|Q38YN3.1|MUTS2_LACSS RecName: Full=MutS2 protein
gi|78609648|emb|CAI54694.1| DNA mismatch repair protein, MutS family [Lactobacillus sakei
subsp. sakei 23K]
Length = 787
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 218/397 (54%), Gaps = 31/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + +V+TGPNTGGKTI LKT+GL +MA+SGL I + E ++V F +FA
Sbjct: 317 VANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSDIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H++ I I+ Q +SLVLLDE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDELGAGTDPQEGAALAIAILDQI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +A+TH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+
Sbjct: 437 GIVGANV-VASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSNAFDIST 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP +V A+QL S ++N +I ++E + RH L + +LH+ L
Sbjct: 496 RLGLPNSIVDQAKQLMNDESQDLNNMITDLENQRKAAETEYQALRHELTEATDLHQQLST 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ E ++ + +K A ++V K+ + ++ R + + Q++ +
Sbjct: 556 AYQQFFEDRETEMTKAKEK-------ANAIVEKAEVKADKVITKLRDMQMNQGAQIKEN- 607
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q K E + +K K R KR + VGD V
Sbjct: 608 ---------------------QLIDAKAELGQLHQETTLKKNKVLQRAKRRQTLKVGDDV 646
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++GT+I+ SK VQ+G +K + D+
Sbjct: 647 LVTSYGQRGTLIRQVDSK-NWEVQMGIIKMKIANDDL 682
>gi|417751918|ref|ZP_12400172.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333772299|gb|EGL49158.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 778
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 229/400 (57%), Gaps = 43/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+ + S ++N +I ++E+ + L+H+ E N
Sbjct: 486 EIARRLGLAEHIVKEAQNMTDTDS-DVNRIIEQLEKQTLESRKRLDHIREVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K A AR +V + L S S L K A
Sbjct: 540 LKFN--RAVKKLYNEFSQAKDKEIEK---ATLEAREIVDLA---LAESDSILNQLHDKAA 591
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
L+P H K Q +Q +K + + + V+K + K+
Sbjct: 592 --LKP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRA 627
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|385840651|ref|YP_005863975.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
gi|300214772|gb|ADJ79188.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
Length = 786
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 268/565 (47%), Gaps = 114/565 (20%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L++++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D +NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFINAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L + V DI
Sbjct: 311 -------------------------------------------------LGMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ FD +FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++V ARQL S ++NE+I ++ + E R +L + LH +
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD-------- 552
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
LE Q R+ + + + A + A Q+ + + ++++ SA+ ++
Sbjct: 553 LETNFHQFERQKENMLEQA-------KERANQIVEETKKKSDELISELRKMKMSAASNIE 605
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
+ Q + + Q+T + K + V++ KQ + PN D V V+S+
Sbjct: 606 EGSLIDAQGRVNALHQETNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSY 651
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKW 788
G++G +++ + GN W
Sbjct: 652 GQRGVLLR----------KAGNHAW 666
>gi|251783280|ref|YP_002997585.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391912|dbj|BAH82371.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 778
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 229/400 (57%), Gaps = 43/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F
Sbjct: 307 LQEPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFS 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+ + S ++N +I ++E+ + L+H+ E N
Sbjct: 486 EIARRLGLAEHIVKEAQNMTDTDS-DVNRIIEQLEKQTLESRKRLDHIREVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K A AR +V + L S S L K A
Sbjct: 540 LKFN--RAVKKLYNEFSQAKDKEIEK---ATLEAREIVDLA---LAESDSILNQLHDKAA 591
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
L+P H K Q +Q +K + + + V+K + K+
Sbjct: 592 --LKP------HEVIEAKGQ------LKQLVPEK----SLSQNKVLK------KAKQLRA 627
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++K E ++ QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLVK-ELKDKKWEAQVGLIKMTLK 666
>gi|188586428|ref|YP_001917973.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351115|gb|ACB85385.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 796
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 227/424 (53%), Gaps = 53/424 (12%)
Query: 387 EMQVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
E ++ ++ HP +P+D+ + + +VITGPNTGGKT+ LK VGL +M +SGL
Sbjct: 295 EKRLEIIKGKHPLLGEDAIPVDVKLGDEFNTMVITGPNTGGKTVSLKMVGLFTLMTQSGL 354
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + ++ F+ VFADIGDEQ + QSLSTFS H+ I I+ + S+SL+LLDE+GA
Sbjct: 355 HIPAERGTEMGVFEQVFADIGDEQDIEQSLSTFSSHMSNIVKIVDHANSESLILLDELGA 414
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG+AL MSLLE F G +IATTH+ +LK+ ++ + ENA +EFDE L+PT
Sbjct: 415 GTDPTEGSALAMSLLEHFHNLGC-RSIATTHYTQLKSFAHAREGVENASVEFDEETLEPT 473
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEM-ERFKTQFLEHV 619
Y +L GVPG+S+A I+ RLGL ++ NA+ E+ E+I + E+ K+
Sbjct: 474 YNLLIGVPGKSNAFVISRRLGLSDKIISNAKSFLADEEIEVEELITSLTEKEKS------ 527
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS--------DAAAIARSLVHK 671
S+ + + L R R K+ E +Q ++ ++IS A A ++
Sbjct: 528 ---------SQKMKEELERERAKV-EQVKAQLEQERKEISRKKDEVLQKARRQAEEIISD 577
Query: 672 SAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT 731
+ + S +AR + K++ + S + G Q ++ +D +
Sbjct: 578 AKRDAEESLKEARKIAEKKSHKEMAEVSSKVRDKLSGHQQ-----KLREELMD------S 626
Query: 732 ASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
A S + K P G V++S+ K+G +++V K E VQVG MK +
Sbjct: 627 ADSVPLSPEKLKP----------GLTVYISNLDKEGQILQVNHDKGEAEVQVGIMKVNVN 676
Query: 792 FTDI 795
F+DI
Sbjct: 677 FSDI 680
>gi|254974324|ref|ZP_05270796.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-66c26]
gi|255091720|ref|ZP_05321198.1| putative DNA mismatch repair protein [Clostridium difficile CIP
107932]
gi|255313448|ref|ZP_05355031.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-76w55]
gi|255516136|ref|ZP_05383812.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-97b34]
gi|255649232|ref|ZP_05396134.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-37x79]
gi|260682406|ref|YP_003213691.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260686005|ref|YP_003217138.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384359986|ref|YP_006197838.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260208569|emb|CBA61251.1| putative DNA mismatch repair protein [Clostridium difficile CD196]
gi|260212021|emb|CBE02571.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
Length = 792
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + R+L +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRNLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|147678274|ref|YP_001212489.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
gi|238686642|sp|A5D0W6.1|MUTS2_PELTS RecName: Full=MutS2 protein
gi|146274371|dbj|BAF60120.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
Length = 785
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 215/390 (55%), Gaps = 30/390 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + LVITGPNTGGKT+ LKT GL V+MA+SGLHI + E +++ F VFA
Sbjct: 314 VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAGEGSRLGIFRQVFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I II ++ SLVLLDE+GAGT+P EG AL S+LE
Sbjct: 374 DIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPAEGAALAQSILEKL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+G+ T+ATTH+GELK + + ENA +EFD + L+PTY++L G PGRS+A IA
Sbjct: 434 HSAGA-KTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIGKPGRSNAFEIAA 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP VV+ AR A + E++ +E+ + + A +R L +
Sbjct: 493 RLGLPEEVVKRARSFLTAEHIQAEELMRSLEKTQQEAEAERRRAAELASEARALKERY-- 550
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
KI AS+R +S AA A++LV + + + + R + + A + R +A
Sbjct: 551 --EKIEADLASKR---ESILSKAAEEAQALVRAARLEAEAAVRELREKMAEEAARERENA 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ K+ K Q + + TV P A + + G+ V
Sbjct: 606 IREAR-EKLRKLQQRVGRAVPEKTV-----PGEAPAGL----------------RPGEEV 643
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
++ + +KG V++ + E++VQVG +K
Sbjct: 644 FLTRYNQKGYVLEPPGAGGEVLVQVGVIKM 673
>gi|431792234|ref|YP_007219139.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782460|gb|AGA67743.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 789
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 219/416 (52%), Gaps = 43/416 (10%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
++S ++ HP VP+ I + + +V+TGPNTGGKT+ LKT+GL MA+ GLHI
Sbjct: 300 EISLVQARHPLLTGKVVPLTIELGTRFDTVVVTGPNTGGKTVALKTLGLLAAMAQCGLHI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ ++V F +FADIGDEQS+ QSLSTFSGH++ I I+ ++ +SL+LLDE+GAGT
Sbjct: 360 PAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMRNIVEIVEKADERSLILLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG+AL M+++ E GS + +ATTH+G LK Y+ ENA +EFD L+PTY+
Sbjct: 420 DPTEGSALAMAIIAQLHERGSRI-VATTHYGALKNFAYNTPRVENASVEFDSETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGLP V+ AR ++ ++I +E + +
Sbjct: 479 LLIGIPGKSNAFYIAGRLGLPEEVLVRARTYVTEREMQVADLIENLEDTQREI------- 531
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ K R R+I+E + K QK+ D + L+ K+ Q +
Sbjct: 532 --------DFEKRRAREERQIIEIESLGLKEKSQKLEDE---YQGLMAKAKDQATEIVRE 580
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
AR + +L+ + + Q VD+ SS V
Sbjct: 581 ARREAERLIDELKLALKE---------------DRKDQQAVDRARQGIRKLSSRVGTSDS 625
Query: 743 SPRVKRTELP---NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
PR P +G +V+++ +KG V+K+ S EI+VQ G +K + ++I
Sbjct: 626 QPRASEGVNPEDLKLGQMVYMTKLRQKGQVLKLPNSSGEILVQAGVIKLNVPLSEI 681
>gi|423082167|ref|ZP_17070762.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
gi|423085790|ref|ZP_17074229.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357548912|gb|EHJ30766.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357549417|gb|EHJ31264.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
Length = 792
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 221/392 (56%), Gaps = 31/392 (7%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPVDYGSSMCVYDNVFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V+ A++ + + +V+ +E+ + + +E EA L + + + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIERLKVEYDEK 557
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 703 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
>gi|423683336|ref|ZP_17658175.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
gi|383440110|gb|EID47885.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
Length = 785
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 217/403 (53%), Gaps = 33/403 (8%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L L VP DI + + +VITGPNTGGKT+ LKT+GL MMA+SGLH+ + E ++
Sbjct: 312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAV 371
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
FD VFADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL +
Sbjct: 372 FDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAI 431
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ ++G+ + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+
Sbjct: 432 SILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSN 490
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I++RLGLP ++ A+ A E++ +I +E K + + E + L
Sbjct: 491 AFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEAL 550
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
H++L Q+ + Q+I D + K+A+++ + +A ++
Sbjct: 551 HRDL------------QQQISEWQEIKD--KLYEEAEQKAAEKVKAAMKEADDII----- 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
QSL K H + + K A S K Q KR P
Sbjct: 592 -------QSLRMI---KEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELKP 641
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 --GDEVKVLTFGQKGTLLE-KTGAAEWNVQIGILKMKVKEKDL 681
>gi|366053748|ref|ZP_09451470.1| MutS2 family protein [Lactobacillus suebicus KCTC 3549]
Length = 790
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 272/575 (47%), Gaps = 110/575 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKM---QVDLDEIEKMLNGI 280
S SG+ IEP + + LN+ L++A+ E +L L+ + ++++ E +L
Sbjct: 216 SQSGLTLFIEPQAVMELNNRLREAQIDERHEERRILAELSSTLAPYRIEIAHNETILG-- 273
Query: 281 IQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPL 340
LD +NA+A + T P + SE+ + L +A HPL
Sbjct: 274 -HLDFLNAKAAIAHEMNATKPIV---------------------SEQNH-VNLKRARHPL 310
Query: 341 LLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVP 400
+ P +M V
Sbjct: 311 I------------------------------------------DPKKM----------VA 318
Query: 401 IDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADI 460
DI I + ++ITGPNTGGKTI LKT+GL +M +SGL+I + E + + F +FADI
Sbjct: 319 NDIEIGDAYKAIIITGPNTGGKTITLKTIGLIQLMGQSGLYIPTEEESSIGVFGDIFADI 378
Query: 461 GDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAE 520
GDEQSL Q+LSTFSGH++ + +I+ S+SLVLLDE+GAGT+P EG AL MS+L+A
Sbjct: 379 GDEQSLEQNLSTFSGHMENVKSILDHIDSRSLVLLDELGAGTDPKEGAALAMSILDAIGV 438
Query: 521 SGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERL 580
S + + TTH+ ELK Y D NA MEFD+ L+PTY++L G+PGRS+A IA+RL
Sbjct: 439 KNSYVMV-TTHYPELKVYGYDRDQTINASMEFDQETLQPTYRLLLGIPGRSNAFEIAQRL 497
Query: 581 GLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTR 640
G+ ++ AR L S ++N++I ++ + + EH E H + + +L L
Sbjct: 498 GISSEIISEARSLTDDDSQDLNKMIGDLVEQRKKAHEHELELEHQVADATDLQTEL---- 553
Query: 641 RKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQ 700
R+ L+ + R ++ D A + Q +QAR + LR Q
Sbjct: 554 RQKLDQFEANR----DQMQDQARV----------QANHEVAQARQKADQIISHLRQLERQ 599
Query: 701 SLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
V +NQ L Q + P + V++ R KR VGD V V
Sbjct: 600 --QGANVKENQ--LIDAKGQLNALHMNDPKLKKNKVLQ------REKRKHDLKVGDAVLV 649
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
S+G+ G + + + K++ VQ+G +K + +D+
Sbjct: 650 KSYGQYGELTR-KMGKDDWEVQLGILKMKVNESDL 683
>gi|341820105|emb|CCC56337.1| mutS2 protein [Weissella thailandensis fsh4-2]
Length = 795
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 225/421 (53%), Gaps = 45/421 (10%)
Query: 386 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
+E V L+ HP VP DI I +++TGPNTGGKTI LKT+GL +MA+S
Sbjct: 298 AENHVRLLKARHPLLDPDKVVPNDITIGEDYSAIIVTGPNTGGKTITLKTLGLLQIMAQS 357
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
G I ++EY+ V F +FADIGDEQS+ QSLSTFS H+ I +I++ SLVL DE+
Sbjct: 358 GFFIPAAEYSSVGIFKEIFADIGDEQSIEQSLSTFSAHMVNITDILAGMDKDSLVLFDEL 417
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL M++L+A E+G+ ++ATTH+ ELK Y+ NA MEFD L+
Sbjct: 418 GAGTDPQEGAALAMAILDAVGETGA-YSVATTHYPELKVYGYNRADTINASMEFDIDSLR 476
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTYK L G+PGRS+A+ IA+RLGL ++ +A L S E+N++I ++ + L
Sbjct: 477 PTYKFLMGIPGRSNALEIAKRLGLSDTIINSASALTSEDSQELNDMIADLVARRNAVLTQ 536
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAA----AIARSLVHKSAQ 674
E ++ +R L KN + LE QR + V+ A A AR K
Sbjct: 537 QVELTQKVVENRQL-KNDYEAK---LEAIDKQRAKTVEDAKKEANHIVADARRKTDKIIG 592
Query: 675 QLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS 734
L A ++ + + A ++H E P+ ++
Sbjct: 593 DLHKMARDGATIKENKLMDAK-GALNAMH-----------------------EEPSPTNN 628
Query: 735 SVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
+++ K++ +V + VGD V V +G++GT+++ + + VQ+G +K ++ +
Sbjct: 629 RILRKAKKAKQVPLS----VGDTVLVREYGQQGTIVR-QLKDNKFEVQMGILKMVLAGEE 683
Query: 795 I 795
I
Sbjct: 684 I 684
>gi|433449627|ref|ZP_20412491.1| MutS2 family protein [Weissella ceti NC36]
gi|429539141|gb|ELA07179.1| MutS2 family protein [Weissella ceti NC36]
Length = 794
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 279/580 (48%), Gaps = 106/580 (18%)
Query: 218 FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S G +EP V +N+ L++ E +L L+E + ++
Sbjct: 209 FGGVVHDQSQTGQTLYVEPADVVDMNNRLRENIVKERHEEARILAELSELLLPVAQDVTA 268
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ + QLD VNA+A Y++ M +SL EP S E I L +
Sbjct: 269 NADILGQLDFVNAKARYAM--------------MSKSL--EPEVSD------ENHIRLLE 306
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPL L+L
Sbjct: 307 ARHPL----------------------------------------------------LDL 314
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
V DI + ++ITGPNTGGKTI LKT+GL +MA+SGL I ++E+A V FD
Sbjct: 315 NKAVANDIVLGEDYTAIIITGPNTGGKTITLKTLGLLQLMAQSGLFIPTAEHATVGMFDQ 374
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL MS+L
Sbjct: 375 IFADIGDEQSIEQSLSTFSSHMVNIVSILDNLTPNSLVLFDELGAGTDPQEGAALAMSIL 434
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+A ++G+ T+ATTH+ ELK ++ NA MEFD LKPTYK L G+PGRS+A+
Sbjct: 435 DAVGQTGAY-TVATTHYPELKVYGFNRADTINASMEFDVETLKPTYKFLLGIPGRSNALE 493
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+ RLGL ++ A L S E+N++I ++ + L E LS + +N
Sbjct: 494 ISRRLGLDNTIIDGAASLADDESQELNDMIADLVARRNAVLTQQIE------LSDQIAEN 547
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
R + + + + Q I A A +V +S ++ A + S +HK ++
Sbjct: 548 R-RMKNEYTDKLEKVDTVRAQTIEKAKQEANHIVAESKKK----ADRIISDLHK----MQ 598
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+Q + K+ + L + Q+ P+ ++ V+K KQ+ T+ G
Sbjct: 599 RDGAQ-IKENKLIDAKGALNALEQK--------PSAENNRVLKRAKQAKDQGITK----G 645
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +G++GTV++V ++ +Q+G +K ++ +I
Sbjct: 646 DTVLVMEYGQQGTVLRV-LKNDQFEIQMGILKMVLSGDEI 684
>gi|392329937|ref|ZP_10274553.1| DNA mismatch repair protein [Streptococcus canis FSL Z3-227]
gi|391419809|gb|EIQ82620.1| DNA mismatch repair protein [Streptococcus canis FSL Z3-227]
Length = 778
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 222/379 (58%), Gaps = 40/379 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ ++ V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LQNPVANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++Q+ ++SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNQADTESLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA MEFD + LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETPYVENASMEFDSISLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL +V A+ + S ++N +I ++E+ Q LE H + + +
Sbjct: 486 EIARRLGLAEHIVNEAQSMTDTDS-DVNRIIEQLEK---QTLESRKRLDHI----KEVEQ 537
Query: 635 NLLRTRR--KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+ L+ R K L H SQ K ++I A AR +V + L S S S +H +A
Sbjct: 538 DNLKFNRAVKKLYHDFSQ--AKDKEIEKARLEAREIVDMA---LAESDS-ILSRLHDKA- 590
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
L+P H K Q +Q ++ A + V+K + K+ P
Sbjct: 591 ALKP------HEVIEAKGQ------LKQLVPER----DLAQNKVLK------KAKQLRAP 628
Query: 753 NVGDLVHVSSFGKKGTVIK 771
VGD + V+++G++GT++K
Sbjct: 629 RVGDDIIVTAYGQRGTLVK 647
>gi|417788685|ref|ZP_12436368.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
gi|334308862|gb|EGL99848.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
Length = 786
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 269/565 (47%), Gaps = 114/565 (20%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L+E++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFTNAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L++ V DI
Sbjct: 311 -------------------------------------------------LDMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ F ++FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++V ARQL S ++NE+I ++ + E R +L + LH +
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD-------- 552
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
LE Q R+ + + + A + A Q+ + + + ++++ SA+ ++
Sbjct: 553 LETNFHQFERQKENMLEQA-------KERANQIVEETKKKSNELISELRKMKMSAASNIE 605
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
+ Q + + Q+T + K + V++ KQ + PN D V V+S+
Sbjct: 606 EGSLIDAQGRVNALHQETNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSY 651
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKW 788
G++G +++ + GN W
Sbjct: 652 GQRGVLLR----------KAGNHAW 666
>gi|312127327|ref|YP_003992201.1| muts2 family protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777346|gb|ADQ06832.1| MutS2 family protein [Caldicellulosiruptor hydrothermalis 108]
Length = 787
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 229/409 (55%), Gaps = 41/409 (10%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
+E VPID+ + ++ VLVITGPNTGGKT+ LKT+GL ++A+SG+ + + E ++V
Sbjct: 307 IEKERVVPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCV 366
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F +FADIGDEQS+ QSLSTFS H+K I I + S +LVLLDEIG+GT+P EG AL
Sbjct: 367 FSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAK 426
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
++L+ GS + +ATTH+GELKT + FENA EFD LKPTY++L G+PG S+
Sbjct: 427 AILKFLYRKGSKV-VATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A+ I+ LGL +V+ A+ + E+ ++I EMER + + E + A + + NL
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLELTDIINEMERKRKELEEALESANKLKIEAENL 545
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
++L RR+ + R V++ AR V + + V K +
Sbjct: 546 KRSLEEERRRFEAEKQRIKERSVKE-------AREFVQRVEDE-----------VEKLFK 587
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR---T 749
+LR A +SL ++ + ++E ++VK I+Q+ + ++ +
Sbjct: 588 ELRKIA-ESLK---------------EKEMLKQLEEKKREYENLVKSIEQASQKEKKLQS 631
Query: 750 ELPN---VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+LP +G V+V SF +G V + SK + V++G MK + +D+
Sbjct: 632 KLPENLRLGQKVYVKSFDAEGFVESLPDSKGNLTVRIGIMKLSVNISDV 680
>gi|418961600|ref|ZP_13513485.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
gi|380343695|gb|EIA32043.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
Length = 786
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 223/450 (49%), Gaps = 91/450 (20%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L+E++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFTNAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L++ V DI
Sbjct: 311 -------------------------------------------------LDMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ F ++FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEM----------ERFKTQFLEHVHEARHFLMLSRNLH 633
++V ARQL S ++NE+I ++ E ++L E H L N H
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHH--DLEANFH 558
Query: 634 KNLLRTRRKILEHC---ASQRFRKVQKISD 660
+ R + +LE A+Q + +K SD
Sbjct: 559 Q-FERQKENMLEQAKEKANQIVEETKKKSD 587
>gi|451345992|ref|YP_007444623.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
gi|449849750|gb|AGF26742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
Length = 785
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 212/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|417810043|ref|ZP_12456724.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
gi|335350967|gb|EGM52463.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
Length = 786
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 223/447 (49%), Gaps = 85/447 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG +EP V LN+ L+Q + + + +L L+E++ E+ + L
Sbjct: 216 SSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGML 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D NA+A Y+ S T EP+ SK E +YL + +HPL
Sbjct: 276 DFTNAKAKYAHSIKAT----------------EPILSK------ENDVYLRQVWHPL--- 310
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L++ V DI
Sbjct: 311 -------------------------------------------------LDMKKAVKNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
I + + +VITGPNTGGKTI LKT+GL +M +SGL+I + E +++ F ++FADIGDE
Sbjct: 322 MIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ +SLVL DE+GAGT+P EG AL +S+L+A GS
Sbjct: 382 QSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGS 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A +I++RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDISQRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL------- 636
++V ARQL S ++NE+I ++ + E R +L + LH +L
Sbjct: 501 KMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEITYRKYLREAEELHHDLEANFHQF 560
Query: 637 LRTRRKILEHC---ASQRFRKVQKISD 660
R + +LE A+Q + +K SD
Sbjct: 561 ERQKENMLEQAKEKANQIVEETKKKSD 587
>gi|116072695|ref|ZP_01469961.1| MutS 2 protein [Synechococcus sp. BL107]
gi|116064582|gb|EAU70342.1| MutS 2 protein [Synechococcus sp. BL107]
Length = 779
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 292/596 (48%), Gaps = 122/596 (20%)
Query: 62 LCHSVSSFARTSLGREAT-LTQL-WSINQTYQDSLRLLDETNAAIEMQKHGSCSL----D 115
+C +++FA T +G EA TQL S+ +T Q ++ A ++ G S D
Sbjct: 1 MCEHLATFASTRMGLEAARATQLPHSLAETLQRQAETVE--MAVLDDLTEGGLSFRSVND 58
Query: 116 LTGVDLSLVKSAI----------------REVRRA---SPLRPNEALAVVALLQFSETLQ 156
L V L +K + R++RR LRP A++ + L+
Sbjct: 59 LRPVLLRCLKGGVASGEELLAVAGTLAAARKLRRQIDDPELRPV-CTALIETMVTLPDLE 117
Query: 157 LSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESL---------FLEVSSI---H 204
L+ +++E + R P L Q L R E + L FL+ S I H
Sbjct: 118 QRLKFSLEEGGRVADRASPPLAGLRQQWHGL-RQERRDKLQELTRRYASFLQDSVIAQRH 176
Query: 205 GR--LCIRTGA-DQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR L ++ GA Q+S + S+SG IEP S + + ++L A + K E+ VL
Sbjct: 177 GRPVLAVKAGAVGQVSGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRVLAE 236
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNA----RATYSLSFGGTSPNIFLPQDMKRSLTHEP 317
L++ + D E +LN ++++ + R Y G PN+
Sbjct: 237 LSDLVAQD----EPVLNSLVEILLALDLALARGRYGRWLGAVPPNL-------------- 278
Query: 318 VTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKG 377
S + E L HPLL+ QHK+ +
Sbjct: 279 ------SEDPEAPFLLRDLRHPLLIWQHKRSSG--------------------------- 305
Query: 378 EKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
SP VPI + ++ + RV+ ITGPNTGGKT+ LK++GLA +MA+
Sbjct: 306 ------SPV------------VPISVDVSAQLRVVAITGPNTGGKTVSLKSLGLAALMAR 347
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI---ISQSTSQSLVL 494
+G+ + S +PW V ADIGDEQSL QSLSTFSGH+K+IG I + + +LVL
Sbjct: 348 AGMLLPCSGQPSLPWCPQVLADIGDEQSLQQSLSTFSGHIKRIGRILHALESGPAPALVL 407
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
LDE+GAGT+P EGTAL +LL+A A+ + LTIATTH GELK LKYS+D FENA + F+
Sbjct: 408 LDEVGAGTDPSEGTALATALLKALADR-ARLTIATTHFGELKALKYSDDRFENASVAFNA 466
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGAASAEINEVIIEME 609
L PTY++LWG+PGRS+A+ IA RLGL G++ Q L AA E+N VI +E
Sbjct: 467 ETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQAQALLAPAAEGEVNTVIQGLE 522
>gi|354580077|ref|ZP_08998982.1| MutS2 family protein [Paenibacillus lactis 154]
gi|353202508|gb|EHB67957.1| MutS2 family protein [Paenibacillus lactis 154]
Length = 789
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 222/404 (54%), Gaps = 46/404 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + +++TGPNTGGKT+ LKT+GL +MA SGL I + E +++ FD+++A
Sbjct: 317 VPLDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++Q T +SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIIRILTQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + IATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HSMGCRM-IATTHYSELKAYAYERKGIINASMEFDINTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH----VHEARHFLMLSRNLHK 634
RLGLPG +++ AR E+ E + Q +EH + E RH + R +
Sbjct: 496 RLGLPGSILEFAR-------GEVKE--------EDQRVEHMIASLEENRHTAEVEREKAE 540
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ RK +E ++ ++Q++ D LV K+ + +ARS + L
Sbjct: 541 QV----RKEMEELRARHREELQRLEDQRD---KLVDKARVEAKQIVDKARSEAEQIISDL 593
Query: 695 RPSASQSLHCTKVGKNQHVLTS---NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
R A + K +H L + ++ ++ + P +QS + + E
Sbjct: 594 RKLAQEEGASVK----EHKLIAARKRLEEAEPEQGKRPGAQ--------RQSKQQRSIE- 640
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S +KG V+++ SKE I VQ+G MK + D+
Sbjct: 641 --AGDEVRVYSLNQKGHVVELAGSKEAI-VQLGIMKMKVGLDDL 681
>gi|312135400|ref|YP_004002738.1| muts2 family protein [Caldicellulosiruptor owensensis OL]
gi|311775451|gb|ADQ04938.1| MutS2 family protein [Caldicellulosiruptor owensensis OL]
Length = 786
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 213/800 (26%), Positives = 368/800 (46%), Gaps = 179/800 (22%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTY-QDSLRLLDETNAAIEMQKHG 110
++ R LE+D++ + S A + + L S ++ + Q L ++E I + K+G
Sbjct: 4 KTFRALEYDRILEMLISAAHSEPAKRYFQNLLPSTDKDFIQKELDKVEE--CFIYILKYG 61
Query: 111 SC-SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAI----KE 165
+L+ + + L L K+ + + L P+E L V +L+ S+ ++ L A+ K
Sbjct: 62 RPPALEFSDISLILKKAKAQAI-----LTPHEILEVARILKLSQEVKSYLANAVGSCLKS 116
Query: 166 DADLYIRFMPLTQMLYQL------------------------MDMLIRNENNESL----- 196
+ LT + Q ++ IR+E N +
Sbjct: 117 SRERLFNLKELTARIDQTFLTPEEILDTASPRLKEIRDRIRRLETRIRDELNRMIRDPKI 176
Query: 197 --FLE--VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQAR 248
FL+ + ++ G +L + A+ + S KG++ S G+ +EP V ++++++ AR
Sbjct: 177 QRFLQEPIITVRGDKLLLPVKAEHKDSIKGIIHDQSATGATLFVEPFVCVEISNQIRVAR 236
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
+ + E +L L++ + +EI++ + +LD++ +A ++ F +
Sbjct: 237 SEEKEEIEKILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRAS--------- 287
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
+P+ + I L KA HPL+ K+K
Sbjct: 288 -------KPILNTAG------YINLKKARHPLI---EKEKV------------------- 312
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
VPID+ + ++ VLVITGPNTGGKT+ LKT
Sbjct: 313 ------------------------------VPIDVHLGKEFDVLVITGPNTGGKTVTLKT 342
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQST 488
+GL ++A+SG+ + + E ++V F +FADIGDEQS+ QSLSTFS H+K I I +
Sbjct: 343 IGLFCLLAQSGMFLPADEGSEVCVFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNAD 402
Query: 489 SQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENA 548
+ +LVLLDEIG+GT+P EG AL ++L+ G+ + +ATTH+GELKT + FENA
Sbjct: 403 NSTLVLLDEIGSGTDPEEGAALAKAILKFLHNKGAKV-VATTHYGELKTFAQQEERFENA 461
Query: 549 CMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEM 608
EFD LKPTY++L G+PG S+A+ I+ LGL +V+ A+ E+ ++I EM
Sbjct: 462 SCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLNKEIVELAKSYMSKKMLELTDIINEM 521
Query: 609 ERFKTQFLEHVHEARHFLMLSRNLHKNL-------LRTRRKILEHCASQRFRKVQKISDA 661
ER + + E + A + + NL K L +++I E + + VQ++ D
Sbjct: 522 ERKRKELEEVLESANKLKIETENLKKTLEEERRRFEAEKQRIKERASKEAREFVQRVEDE 581
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
V K ++LR A +SL ++
Sbjct: 582 -------------------------VEKLFKELRKIA-ESLK---------------EKE 600
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVK---RTELPN---VGDLVHVSSFGKKGTVIKVEPS 775
+ ++E ++VK I+Q+ + + +++LP +G V+V SF +G V + S
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSFDAEGFVESLPDS 660
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
K + V++G MK + +DI
Sbjct: 661 KGNLTVRIGIMKLSVNISDI 680
>gi|425738677|ref|ZP_18856935.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
gi|425479024|gb|EKU46205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
Length = 782
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 218/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +K+ FD VF DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSKLGVFDHVFCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I NI+ ++ SL+L DE+GAGT+P EG L MS+L+ E GSL+ +ATTH
Sbjct: 392 TFSSHMKTIVNILDEANQNSLILFDELGAGTDPTEGATLAMSILDYVHEIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++RLGL ++ +A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFEISKRLGLKLQIINHAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +ER + E E + + +HK L +T + A Q
Sbjct: 511 SMVGHDEKEINAMIESLERNTKRVDEQKIELDALIREAETMHKELDQT------YTAYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K ++ + A + A Q A++ + K +Q+R V +
Sbjct: 565 YEK--RLMEQAK-------EKANQRVKEATKEADTILKELRQMRDKKG-------VDVKE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L + ++E+ A S +K + + K+ + GD V V S+G+KG V++
Sbjct: 609 HELIDKKK-----RLENQYEADS-----LKANVKKKKWDKIKAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ +E VVQ+G +K + D+
Sbjct: 659 L-LDDDEAVVQMGIIKMKLPLNDL 681
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 27/165 (16%)
Query: 182 QLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLS 236
Q +D ++++++N+ + V+ + R I A+ + F G++ S+SG IEP S
Sbjct: 171 QQLDKIVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSS 230
Query: 237 AVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSF 296
V +N+++ + R+ +L LT + D + + + +D + A+A Y+ S
Sbjct: 231 VVEMNNQISRLRSEEDTERARILTELTTLVATDSEGCLSAESIMGHIDFLTAKARYARSI 290
Query: 297 GGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLL 341
GT P +D IYLPKA+HPLL
Sbjct: 291 KGTKPTFTTNRD----------------------IYLPKAFHPLL 313
>gi|357162691|ref|XP_003579491.1| PREDICTED: mutS2 protein-like [Brachypodium distachyon]
Length = 927
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 297/612 (48%), Gaps = 105/612 (17%)
Query: 200 VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
V+ R+C+ A L G++LSSSG G+ +EP AV LN+ ++ +S + E
Sbjct: 269 VTKRRSRMCVGVKASHKHLLPGGIVLSSSGSGATYFMEPRDAVKLNN-MEVKLSSDERTE 327
Query: 256 EDVLLAL-TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
E +L L T ++ +I ++ I++LD+ AR +Y+L G P D S
Sbjct: 328 ELAVLGLLTSRIADSRMKIRHLMGKIMELDLACARGSYALWINGVRPAF---SDRDNSGQ 384
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+P + ++++++ HPLLL+Q + +TE+ + +L
Sbjct: 385 LDPSS--------DFSVFIDGIQHPLLLEQSF--------GIAKGSTEVGKGQL------ 422
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
E VS++ PVP+D+ + TR++VI+GPNTGGKT +KT+GLA +
Sbjct: 423 ----------SEEHPVSSM----PVPLDMHVKSDTRIVVISGPNTGGKTATMKTLGLATL 468
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M+K+G+ + K+PWFD V ADIGD QSL SLSTFSG++ ++ I+ + SLVL
Sbjct: 469 MSKAGMFFPAKGSPKLPWFDQVLADIGDHQSLENSLSTFSGNISRLRKIVQVVSRDSLVL 528
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSL-LTIATTHHGELKTLKYSNDFFENACMEFD 553
+DEIG+GT+P EG +L S+L+ A G L L I TTH+ +L LK + FENA MEF
Sbjct: 529 IDEIGSGTDPSEGVSLSTSILKYLA--GRLNLAIVTTHYADLSRLKAVDGRFENAAMEFC 586
Query: 554 EVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKT 613
LKPTY+ILWG G S+A++IA+ +G V+ A++ +
Sbjct: 587 LETLKPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQE------------------WVE 628
Query: 614 QFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSA 673
+ L + R L L+ +LL R +LE A++ A S V
Sbjct: 629 KLLPDKQKERQGL-----LYGSLL-DERNLLESQANE-----------VASVLSEVEVLY 671
Query: 674 QQLCPSASQARSLVHKRAQQLRPSASQSL-HCTKVGKNQ-HVLTSNF----------QQT 721
++C A + R LR SQ + H K+ K+Q ++ NF Q
Sbjct: 672 NEICLEADD----LDNRVAALRARESQKVQHELKLVKSQMDLIIRNFEVQLKNSKLEQYN 727
Query: 722 TVDKVEHPATASSSVVKDIKQ----SPRVKRTELPNVGDLVHVSSFGKK--GTVIKVEPS 775
+V K +TAS + + K + +P +GD V+V G TV+++
Sbjct: 728 SVMKKAEASTASLAAAHQPTEFAFSDDENKSSYVPQIGDKVYVEGLGGGSLATVVEILSE 787
Query: 776 KEEIVVQVGNMK 787
+VQ G +K
Sbjct: 788 DGSCMVQYGKIK 799
>gi|313889740|ref|ZP_07823382.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|416851675|ref|ZP_11908820.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313121785|gb|EFR44882.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|356739164|gb|EHI64396.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 777
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 220/399 (55%), Gaps = 43/399 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PVP D+ +R+ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ + + + F+
Sbjct: 307 LKNPVPNDLHFSRQLSVIVITGPNTGGKTIMLKTLGLAQIMGQSGLPILADQGSTIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVAILDEANQDSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + + T+ATTH+ ELK F ENA MEFD LKPTY + GVPGRS+A
Sbjct: 427 LEQLRLT-EIKTMATTHYPELKAYGIETAFVENASMEFDSRSLKPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V A Q+ + S ++N +I E+E+ Q LE H H + + NL
Sbjct: 486 EIARRLGLADPIVNQAEQMTDSDS-DVNRIIEELEK---QTLESRHRLDHIKEVEQDNLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
N R +K+ A + ++++K S A +L ++++ +A +L
Sbjct: 542 FN--RAVKKLYYEFAQAKDKEIEKASLEAQEIVNLALAESEEILAKLHEASAL------- 592
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQ-QTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
K ++ + Q + V K + K ++Q P
Sbjct: 593 ---------------KPHQIIEAKGQLKKLVPKTDLTKNKVLKKAKKLRQ---------P 628
Query: 753 NVGDLVHVSSFGKKGTVIK-VEPSKEEIVVQVGNMKWIM 790
GD + V+++G++GT++K V+ K E QVG +K +
Sbjct: 629 QAGDDILVTAYGQRGTLLKQVKGDKWE--AQVGLIKMTL 665
>gi|421730736|ref|ZP_16169862.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407074890|gb|EKE47877.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 785
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 212/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|375363272|ref|YP_005131311.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371569266|emb|CCF06116.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 785
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 212/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P F+ D I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAIKATKP--FMNGD--------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|159901402|ref|YP_001547649.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
gi|159894441|gb|ABX07521.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
Length = 806
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 279/592 (47%), Gaps = 107/592 (18%)
Query: 205 GRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR + A Q + +G++ SSSG IEPL+ V LN++ ++ + + + + +L A
Sbjct: 193 GRYVVPVKAPQRRALRGIVHDQSSSGATLYIEPLATVELNNQWRELQLAEREEIQRILAA 252
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L+ K+ + I + +LD+ A+A YS+S + P I P
Sbjct: 253 LSGKIANEGMPIIVGVEATAELDLAFAKAKYSISLRASQPAINTP-------------VP 299
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
E T+ L KA HPLL Q
Sbjct: 300 ADDLHPESTLSLLKARHPLLNQ-------------------------------------- 321
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+L P D+++ T++++ITGPNTGGKT+ LKTVGL +MA++GLH
Sbjct: 322 ------------DLVVPT--DVWLGGPTQMIIITGPNTGGKTVALKTVGLMALMAQAGLH 367
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + + +++P F +FADIGDEQS+ QSLSTFS H+ I I+ + T SLVL DE+GAG
Sbjct: 368 IPAHQGSRLPIFGKIFADIGDEQSIEQSLSTFSSHMTNIIQILDRVTPDSLVLFDELGAG 427
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P+EG AL +++E G L +AT+H+ ELK YS D ENA +EFD L PTY
Sbjct: 428 TDPVEGAALARAIIERLLNVGC-LAMATSHYAELKAFAYSTDGVENASVEFDVETLSPTY 486
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
++ G+PGRS+A+ IAERLGL +++ AR + ++ +++ + R +T E
Sbjct: 487 RLSIGLPGRSNALAIAERLGLKRDLIERARATISRDNVQVEDLLAAIHRERTT---AESE 543
Query: 622 ARHFLMLSRNLHKNLLRTRRKI--LEHCASQRFRKVQK-ISDAAAIARSLVHKSAQQLCP 678
A L L + R R++ E Q+ Q+ + D R+ + + +
Sbjct: 544 AARALELREDAELVRDRLSRELYEFEQDREQQLASYQRQLDDELREVRAELRRLRDEFR- 602
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
S S +R + + Q+L ++V + V + P A VV
Sbjct: 603 SVSVSRQWMEQAEQRL----------SRVAER------------VPQTPTPPKAKVPVV- 639
Query: 739 DIKQSPRVKRTELP---NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
P+V LP VGD V VSS G V+ ++ E VQ+G +
Sbjct: 640 -----PKVALAPLPRTIQVGDQVFVSSVKLSGVVLDLDEEANEAEVQLGGFR 686
>gi|295107995|emb|CBL21948.1| MutS2 family protein [Ruminococcus obeum A2-162]
Length = 793
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 274/602 (45%), Gaps = 119/602 (19%)
Query: 204 HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLL 260
+GR CI A+ + G++ S GS IEP+S V LN+++++ K E +L
Sbjct: 192 NGRYCIPVKAEYKGQVPGMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILA 251
Query: 261 ALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
L++++ ++ + I L ++QLD + ARA ++ + P IF
Sbjct: 252 DLSQQIALEQETISLNLKIMVQLDFIFARAALAMDMNASEP-IF---------------- 294
Query: 321 KVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
E I L KA HPL+ +K+K
Sbjct: 295 -----NDEGRINLKKARHPLI---NKKKV------------------------------- 315
Query: 381 TNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
VPIDI + +LVITGPNTGGKT+ LKTVGL +M +SGL
Sbjct: 316 ------------------VPIDIRLGDTFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGL 357
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + + +++ F V+ADIGDEQS+ QSLSTFS H+ I + + ++ SLVL DE+ +
Sbjct: 358 HIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFLDKADRHSLVLFDELCS 417
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL +S+L E G + T+ATTH+ ELK S ENAC EFD L PT
Sbjct: 418 GTDPTEGAALAISILSYLHERG-IRTMATTHYSELKVFALSASGVENACCEFDVETLSPT 476
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG+S+A I+ +LG+P +++ A++ +V+ +E +
Sbjct: 477 YRLLIGIPGKSNAFAISSKLGIPQSIIEKAKEQLNEQDESFEDVLTSLEESRVTIENERT 536
Query: 621 EARHFLMLSRNLHKNLLRTRRK-------ILEHCASQRFRKVQKISDAAAIARSLVHKSA 673
E + L K L + K I+ + + +Q+ D A L HK
Sbjct: 537 EIAQYKQEIETLKKQLESKQEKLDIQKDRIIRQANEEAHKVLQEAKDYADQTMKLFHKFH 596
Query: 674 QQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS 733
+A+ V + Q+LR K+ K + ++ Q K + TA
Sbjct: 597 NDYVDTAA-----VERERQKLR---------QKLNKTEQKMS---QPAAKKKPKKELTA- 638
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
KD++ GD V V S KGT+ SK + VQ+G ++ + +
Sbjct: 639 ----KDVRP------------GDTVRVLSMNLKGTISTRPDSKGYLFVQMGIIRSKVHIS 682
Query: 794 DI 795
D+
Sbjct: 683 DL 684
>gi|288553660|ref|YP_003425595.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pseudofirmus OF4]
gi|288544820|gb|ADC48703.1| MutS2 recombination and DNA strand exchange inhibitor protein
[Bacillus pseudofirmus OF4]
Length = 788
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 281/584 (48%), Gaps = 111/584 (19%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ S+SG IEP + V +N++L++A+ E +L L+ + + I
Sbjct: 208 AFGGIVHDQSASGATLFIEPQAIVTINNQLREAKVKEAHEVERILAELSALISEHAEAIL 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + QLD + ++A Y+ T+P + ++R + I+L
Sbjct: 268 INLEQLAQLDFIFSKAHYAKRIKATAPLL---------------------NDRGY-IHLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+A HPLL A+ E+
Sbjct: 306 RARHPLL-----------------ADEEV------------------------------- 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
VPID+ + + R L+ITGPNTGGKT+ LKTVGL +MA+SGLH+ E ++V F
Sbjct: 318 ----VPIDVILGDEYRSLIITGPNTGGKTVTLKTVGLLTLMAQSGLHVPVDEESEVAVFK 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ + QSLVL DE+GAGT+P EG AL +S+
Sbjct: 374 QIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDFQSLVLFDELGAGTDPTEGAALAISI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + G+ + +ATTH+ ELK Y+ + NA +EFD L+PTY++L GVPGRS+A
Sbjct: 434 LDDVYKRGACV-VATTHYSELKGYAYNREGAMNASVEFDVETLRPTYRLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGL ++++A++ + + +I +I +E + EA + L
Sbjct: 493 AISRRLGLDERIIESAKEQIDSETNQIENMIASLETSQKSAESEWAEASEIRKKAETLRN 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L+ +E Q+ R +++ D A A SA + + +L
Sbjct: 553 ELMAQ----IEQLEEQKERVLKEAEDKAKAA-----------VESAKEEAEFI---IGEL 594
Query: 695 RPSASQSLHCTK---VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
R + L+ + + +H+ + + T K A + + IK
Sbjct: 595 REMQKEGLNVKEHQLIDAKKHLEEAAPKLTAKQKKVKKEAARAKAKQTIK---------- 644
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V SFG+KG VI+ + +++E VQ+G MK +K D+
Sbjct: 645 --AGDDVKVLSFGQKGHVIE-QVNEKEYNVQIGIMKMKVKADDL 685
>gi|421860087|ref|ZP_16292245.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
gi|410830291|dbj|GAC42682.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
Length = 785
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 218/397 (54%), Gaps = 34/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI + + +++TGPNTGGKT+ LKT+GL +MA SGL I + + +++ FD+++A
Sbjct: 317 VPIHVELGNSYTSILVTGPNTGGKTVTLKTIGLLSLMAMSGLFIPAEDGSQMCVFDTIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS HL I I+ Q T +SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 437 HRLGCRM-VATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLIGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ +AR E+ E + +E ++ +A + L +L
Sbjct: 496 RLGLPKSIIDHAR-------GEVTEEDMRVETMIASLEDNRLKAEAERETASKLRMDLEA 548
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++K+ Q + ++ + A AR++V K+ +Q AQ++
Sbjct: 549 MQQKLTRELEKQEADREKRQAQAEEKARAIVDKARRQ---------------AQEIIADL 593
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q L V +H+LT + +++ A + K +Q+ +R E GD V
Sbjct: 594 RQ-LAMEGVEVKEHMLTEARK-----RLDEAAPEAKLAAKPKRQAKPARRIE---AGDDV 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S +KG+V VE EE VVQ+G MK + D+
Sbjct: 645 RVYSLNQKGSV--VEFVGEEAVVQLGMMKMKVPLDDL 679
>gi|78778605|ref|YP_396717.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
gi|78712104|gb|ABB49281.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
Length = 803
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 220/792 (27%), Positives = 362/792 (45%), Gaps = 164/792 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLD--------ETNAA 103
ES+ +LEWD + +SSFA T +G+ A L+ + I Y+ + RLL+ E N
Sbjct: 19 ESISLLEWDSIKTHLSSFASTEMGKRAILS--FKIPSEYEVAKRLLNETVEITELENNLE 76
Query: 104 IEMQKHGSCSLDLT-------GVDLS-------LVKSAIREVRRA---SPLRPNEALAVV 146
+ G C + GV LS + SA R +++ RP +
Sbjct: 77 KSISFSGVCDISRNIEICSKGGVILSSELLEIAITISAARNLKKILLDFEKRPFISSFTK 136
Query: 147 ALLQFSETLQLSLRAAIKEDADL---------YIRFMPLTQMLYQ--LMDMLIRNENNES 195
L+ ++ L+ I+ + + +R L++ L + L+D I+
Sbjct: 137 NLIDH-HNIETILKNGIESNGRISDDASSKLSILRKELLSKKLERKILVDKFIQKN---L 192
Query: 196 LFLEVSSI---HGRLCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARA 249
+L+ + I +GR + + + FKG++ SS G+ + EP S V +++ A
Sbjct: 193 AYLQDTIIGDRYGRPVLAVKVNYIDKFKGIIHDSSSSGNTVYFEPDSVVTKGNKIASLEA 252
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDM 309
+ E +L ++ + + + + M + +++L+ R+ YS GG +P IF
Sbjct: 253 RIAAEEFKLLQKWSQVISDNSENLIAMASILLRLENALTRSRYSKWIGGKTP-IF----- 306
Query: 310 KRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
P+ S + S HPLL+ ++K+K
Sbjct: 307 ----EENPIISLIGFS------------HPLLIWENKKKG-------------------- 330
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
SP PV +D I R +V+ ITGPNTGGKT LK +
Sbjct: 331 --------------SPP-----------PVAVDFQINRNIKVVAITGPNTGGKTAALKGL 365
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GL+++MA++GL I S+ +P+ +++ DIGD QSL ++LSTFSGH+ +I I+ +
Sbjct: 366 GLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSGHISRIKEILESLDN 425
Query: 490 Q---SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
+ S+VLLDEIG+GT+PLEG+AL M+LL+ FA S +T+ATTH+G++K LKY++ FE
Sbjct: 426 RRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANK-SDITLATTHYGDIKALKYNDSRFE 484
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL-PGIVVQNARQLYGAASAEINEVI 605
N + FDE LKP Y + WG+PGRS+A++I++R+GL I+ + A L IN +I
Sbjct: 485 NVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLNESILNEAANYLKPKEVDNINSII 544
Query: 606 --IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
+E ER K Q A + + LH L +R + QKI +A
Sbjct: 545 KGLEEERIKQQ--NSAEAAAELIARTEILHDEL-------------KRNYEYQKI-NAEK 588
Query: 664 IARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKN-QHVLTSNFQQTT 722
I +K ++++ + + L+ K LR +GK + + T + Q
Sbjct: 589 IQEIERYKLSKKIISAKKEVIDLIRK----LRDQNVNGEDTRIIGKRLKEIETEHLTQKK 644
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
VD K I +P+ VGD V + S G ++ ++ V+
Sbjct: 645 VD-------------KSISWNPK--------VGDFVKIKSLNSTGQIVDLDKKGGFYEVK 683
Query: 783 VGNMKWIMKFTD 794
G+ + I+ D
Sbjct: 684 CGSFRSILSVND 695
>gi|412988993|emb|CCO15584.1| DNA mismatch repair protein MutS [Bathycoccus prasinos]
Length = 1144
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 217/402 (53%), Gaps = 46/402 (11%)
Query: 398 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 457
PVP+D+F+ +T+ +VITGPNTGGKT +K +GL+ +MA++G+ + +E A +PWFD V
Sbjct: 584 PVPVDVFVEARTKCVVITGPNTGGKTAAMKALGLSALMARAGMFV-PAERAHLPWFDYVL 642
Query: 458 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 517
DIGD+Q L +LSTFS L I+ ++T QSLVL+DE+G GT+PLEG A+ + L+A
Sbjct: 643 CDIGDDQDLLTNLSTFSARLTTQKAILKRATPQSLVLIDEVGTGTSPLEGAAIARAFLKA 702
Query: 518 FA-----ESGSLLTIATTHHGELKTLKY---SNDFFENACMEFDEVKLKPTYKILWGVPG 569
A G L ATTH G LK LKY + FENA +EFDE +L+PTY++LW VPG
Sbjct: 703 LAGLLPRRLGVSLAFATTHQGSLKALKYEHKDSGAFENAAVEFDEAELRPTYRLLWSVPG 762
Query: 570 RSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM-- 627
RS A+ IA+R L V+ +A+++ G + A +++VI E+E + + V +A L
Sbjct: 763 RSRALQIAQRNKLDEDVINSAKEVMGQSFATLDDVIAELEGARKDADKAVAKAMQMLKDV 822
Query: 628 -----LSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+RN + +LR + E A ++ + +IS A I + +Q SA+
Sbjct: 823 EKRIPQARNAEQKVLRVK----EDVAMKQATTIVRISREAKIRIQGEERLKRQEL-SANT 877
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+S++ K A S ++ K + +N + +K T
Sbjct: 878 KKSMIAKSAA----GESDREREIRLAKERKAAATN-GEAGAEKTHQECT----------- 921
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVG 784
E+P VGD V + + G G V KV S E + V G
Sbjct: 922 -------EMPAVGDQVILKASGLAGKVTKV--SGEIVTVAAG 954
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 53/312 (16%)
Query: 51 YESLRVLEWDKLCHSVSSFARTSLGR--------EATLTQLWSINQTYQDSLRLLDETNA 102
Y+SL + W +L VS F T+LG+ E+ +++++S + S LLDET +
Sbjct: 133 YDSLDRVGWFELLSFVSEFTSTALGKARLSSSEGESLISEVYS----QEMSELLLDETES 188
Query: 103 AIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAA 162
A+ M+ SLD G+ + ++ + + +PL +E +AV L+ + L+LS+
Sbjct: 189 AMYMESVAGVSLDFGGMLTIETRRSVHKASQGAPLGGDELMAVANFLENARRLKLSIENV 248
Query: 163 IKEDA-----DLYIRFMPLTQMLYQL------MDMLIRNENNESLFLEVS---------- 201
ED ++ MPL + Q+ D++ ++ F + +
Sbjct: 249 SHEDDETGEIEVPRAMMPLRNIAVQMETFSEVADIIKSKVDDTGSFKDNASPELRRARAH 308
Query: 202 --------------------SIHGRLCIRTGADQLSFKGLLLSSSGIGSVIEPLSAVPLN 241
S GR+C+ + L+L + ++IEP S V LN
Sbjct: 309 LSGKETQLKELLSRMPGSAVSFRGRMCLAVSPESAPKNALVLGTQSGLTLIEPPSVVNLN 368
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
EL +A+ A + + L+ + +EI + L I LDV+ AR + + P
Sbjct: 369 TELAKAKDDEESAIDGIKRELSRVIMEVAEEILRCLELTIDLDVIAARCRHGQALNSVRP 428
Query: 302 NIFLPQDMKRSL 313
D++ ++
Sbjct: 429 TFARESDLEDAI 440
>gi|227513131|ref|ZP_03943180.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
gi|227083706|gb|EEI19018.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
Length = 788
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 219/404 (54%), Gaps = 44/404 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + R ++ITGPNTGGKTI LKTVGL +M +SGL I ++E +++ FD VFA
Sbjct: 318 VANDIQIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGD+QS+ +LSTFS H+ I +I++ +SQSL+LLDE+GAGT+P EG AL M++++A
Sbjct: 378 DIGDDQSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAI 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+SG L IATTH+ ELK Y+ NA MEFD L+PTY+ L G+PG+S+A+NIA
Sbjct: 438 HQSGCEL-IATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIAS 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGL +++ AR + + +IN +I E+ + + + L S LH +L
Sbjct: 497 KLGLSKGIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQN 556
Query: 639 T-------RRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+ +LE Q + V+K +A + +HK QQ+ SA + L+ +
Sbjct: 557 QFTQYQNQKDHLLEQAREQANQVVEKAKISADKIIADLHKKQQQVGQSAIKENELIDAKG 616
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
R + +L KV + + +F HP
Sbjct: 617 ALNRLEVTPNLKKNKVLRKEKA-KHDF---------HP---------------------- 644
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S+G++GT+I+ E + VQ+G +K + D+
Sbjct: 645 ---GDEVLVKSYGQQGTLIRQEKNG-AWEVQLGILKMQIDENDL 684
>gi|56964440|ref|YP_176171.1| recombination and DNA strand exchange inhibitor protein [Bacillus
clausii KSM-K16]
gi|81678829|sp|Q5WEK0.1|MUTS2_BACSK RecName: Full=MutS2 protein
gi|56910683|dbj|BAD65210.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length = 787
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 175/581 (30%), Positives = 282/581 (48%), Gaps = 106/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ SSSG IEP + V LN++L +A+A + E +L L+ K+ + +++
Sbjct: 208 TFGGIVHDQSSSGATLFIEPAAIVTLNNQLTEAKAKEKREIERILRELSAKVAEESEQLL 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
++ + QLD + A+A Y+ + P + ++R + + L
Sbjct: 268 LNVDKLAQLDFICAKAYYAKAVKAVKPTL---------------------NDRGY-LDLR 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+A HPLL + PS+M +
Sbjct: 306 QARHPLL-------------------------------------PPDKVVPSDMAI---- 324
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+ R LVITGPNTGGKT+ LKT+GL +MA+SGL + ++E ++ F+
Sbjct: 325 -----------GDQVRSLVITGPNTGGKTVTLKTIGLLTLMAQSGLFVPAAEETELAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+K I +I+++ SL+L DE+GAGT+P EG AL +S+
Sbjct: 374 HIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENSLILFDELGAGTDPTEGAALAISI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + G+ L +ATTH+ ELK Y+ + NA +EFD L+PTY++L GVPGRS+A
Sbjct: 434 LDHVYKRGA-LAVATTHYSELKGYAYNREGALNASVEFDVETLRPTYRLLVGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGL ++ A+ + ++++ ++I +E + A + L +
Sbjct: 493 AISRRLGLDERIIDQAKLQIDSDASQVEKMIASLEDSQKSAQSEWSRAEAVRREAEALKR 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+L +R +++ +AA + A+++ +A + L+ +L
Sbjct: 553 DL------------EKRMASFEEMKEAAL---QKAEQKAEKVVAAAQENAELI---ISEL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R L V +H L +Q + P S + KQ+ + KR LP
Sbjct: 595 R-----DLQKQGVAVKEHQLIEARKQL---EEAAPKLVSKKRKQVKKQAEKAKR--LPEP 644
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V SF +KGTV+K + E VQ+G MK + DI
Sbjct: 645 GDEVKVLSFNQKGTVVK-KIGDNEYQVQLGIMKMAVPIDDI 684
>gi|403379972|ref|ZP_10922029.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. JC66]
Length = 788
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 217/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + + ++ITGPNTGGKT+ LKT+GL +MA SGL + + + +++ FD +FA
Sbjct: 317 VPLDVELGNQFQSIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVPAEDSSQLCVFDGIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + T +SLVLLDE+GAGT+P EG+AL +S+LEA
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIISILKEMTPKSLVLLDEVGAGTDPAEGSALAISILEAI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRLGCRM-VATTHYSELKAYAYERKGIVNASMEFDVQTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ +AR GA + +I +E + A L + L +
Sbjct: 496 RLGLDKKIIDHARSQVGADDQRVESMIATLEENRLSAEAERKSAEQLNAEVAALRQQLEK 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R + +E SQ L+ K+ QQ + +AR + ++LR A
Sbjct: 556 ERSR-MEQQRSQ-----------------LLAKAEQQAEEAVKKARQEAEQIIRELRQMA 597
Query: 699 SQ---SLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ S+ K+ + + L Q +DK P + S S K P G
Sbjct: 598 MEERSSIKEHKLIEAKRKLDEAVPQ--LDK--KPVSGSRSGSKARAIEP----------G 643
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V S G+KG V+++ K E+ VQ+G MK + TD+
Sbjct: 644 DEVLVRSLGQKGHVVELSGDK-EVTVQLGIMKMKIAKTDL 682
>gi|228999325|ref|ZP_04158905.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
gi|229006880|ref|ZP_04164512.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228754373|gb|EEM03786.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228760522|gb|EEM09488.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
Length = 786
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 225/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 YNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR G + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDHVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHC--ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDERLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L S ++ A+ +VK KQ +VK T +
Sbjct: 600 AQ---------------LASVKDHELIEAKSRLEGAAPELVK--KQRVKVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +D+
Sbjct: 643 AGDEVKVLTFGQKGQLLK-KVSDNEWNVQIGILKMKVKESDM 683
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP V LN+ LQ+AR + E +L+ LTE++ ++ D + + I L
Sbjct: 217 SASGQTLFIEPQVIVELNNALQEARVKEKQEVERILMMLTEEVALEADTVLANVEVIANL 276
Query: 284 DVVNARATYSLSFGGTSP 301
D + A+A Y+ T P
Sbjct: 277 DFIFAKAFYAKRIKATKP 294
>gi|88807280|ref|ZP_01122792.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
gi|88788494|gb|EAR19649.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
Length = 794
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
Query: 414 ITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTF 473
ITGPNTGGKT+ LK++GLA +MA++GL + S +PW V ADIGDEQSL QSLSTF
Sbjct: 339 ITGPNTGGKTVTLKSIGLAALMARAGLWVPCSGSPTLPWCAQVLADIGDEQSLQQSLSTF 398
Query: 474 SGHLKQIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATT 530
SGH+K+IG I I + +LVLLDE+GAGT+P EGTAL +LL A+ + LT+ATT
Sbjct: 399 SGHVKRIGRILEAIRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADR-ARLTVATT 457
Query: 531 HHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNA 590
H GELK LKYS+ FENA + FD L PTY +LWG+PGRS+A+ IA RLGL G V+ A
Sbjct: 458 HFGELKALKYSDARFENASVAFDSETLSPTYHLLWGIPGRSNALAIATRLGLEGSVIDEA 517
Query: 591 RQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
R L E+N VI +E + + +A L + LH+ LL+ K +H A
Sbjct: 518 RALLAPVGDGEVNTVIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAE 577
Query: 650 QRFRKVQKI 658
++ + Q++
Sbjct: 578 RQEQGRQRL 586
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 44/294 (14%)
Query: 50 VYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKH 109
+ E+L +LEW +LC ++SFA T GR ++ ++ + QDSL L +T +
Sbjct: 4 LQETLELLEWPRLCDHLASFASTVQGRRHC--KIDALPASLQDSLALQAQTLEMGSLDGV 61
Query: 110 GSCSLDLTGV----------------------DLSLVKSAIREVRR---ASPLRPNEALA 144
L GV D++ +A R +RR LRP
Sbjct: 62 LEGGLSFQGVSDLARTLLRCSKGGTASGEELLDVANTLAAARRLRRQIDEPELRPVCTTL 121
Query: 145 VVALLQFSETLQLSLRAAIKEDADLYIRFMP-LTQMLYQLMDMLIRNENNESLFLE---- 199
+ + F + L+ L+ AI+E + R P L + Q ++ R + +
Sbjct: 122 LRDVATFPD-LEQRLKFAIEEGGRVADRASPGLDGLRRQWQELRARRRDRLQDVIRRWAA 180
Query: 200 ------VSSIHGR--LCIRTGADQLSFKGLLLSSSGIG--SVIEPLSAVPLNDELQQARA 249
++ HGR L ++ GA G++ SS G +EP S + L ++L
Sbjct: 181 HLQDTVIAERHGRPVLAVKAGAGG-QCPGMVHDSSASGSTMFVEPKSVIDLGNKLADVDG 239
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ + E+ VL L+ + ++ ++ ++ +++LD+ AR Y G P +
Sbjct: 240 RIREEEQRVLSELSAAVAEQVEGLQHLMQVLLKLDLALARGRYGQWLGAVPPRL 293
>gi|325568915|ref|ZP_08145208.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
gi|325157953|gb|EGC70109.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
Length = 787
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 226/397 (56%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL IL+ E +++ F+ +FA
Sbjct: 317 VPNDITIGKDYQAVVITGPNTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVDVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-AKSAYVMATTHYPELKVYGYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A+++ S ++NE+I ++E + E RH + + LH+
Sbjct: 496 RLGLPETIIDQAKEIMDGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQE--- 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
LE S F + +K A AR + A Q+ A + + ++++ +
Sbjct: 553 -----LEAAYSYFFEEREK---ELAKAR----QKANQIVEEAKEESEKIIADIRKMQLAG 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q TKV K ++ + + + + + EH + V++ K + +K GD V
Sbjct: 601 GQ----TKV-KEHELIDARTKLSGLQQEEH--LQKNKVLQKAKAAKTLKE------GDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++G ++K + K + VQ+G +K + TD+
Sbjct: 648 LVTSYGQRGVLLK-KAGKNQWQVQIGILKMNLPETDL 683
>gi|257867419|ref|ZP_05647072.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257873749|ref|ZP_05653402.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
gi|257801475|gb|EEV30405.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257807913|gb|EEV36735.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
Length = 787
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 226/397 (56%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I ++ + +VITGPNTGGKTI LKT+GL +M ++GL IL+ E +++ F+ +FA
Sbjct: 317 VPNDITIGKEYQAVVITGPNTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I ++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-AKSAYVMATTHYPELKVYGYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A+++ S ++NE+I ++E + E RH + + LH+
Sbjct: 496 RLGLPDTIIDQAKEIMDGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQE--- 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
LE S F + +K A AR + A Q+ A + + ++++ +
Sbjct: 553 -----LEAAYSYFFEEREK---ELAKAR----QKANQIVEEAKEESEKIIADIRKMQLAG 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q TKV K ++ + + + + + EH + V++ K + +K GD V
Sbjct: 601 GQ----TKV-KEHELIDARTKLSGLQQEEH--LQKNKVLQKAKAAKTLKE------GDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++G ++K + K + VQ+G +K + TD+
Sbjct: 648 LVTSYGQRGVLLK-KAGKNQWQVQIGILKMNLPETDL 683
>gi|205374420|ref|ZP_03227217.1| recombination and DNA strand exchange inhibitor protein [Bacillus
coahuilensis m4-4]
Length = 766
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 272/572 (47%), Gaps = 107/572 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP S V LN+ L++ R E +LL L+ ++ +++ ++N + +
Sbjct: 199 SSSGQTLFIEPESVVQLNNSLRELRVKEQTEIEKILLELSGRVSEVTEDLSVIINHLAHI 258
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + +A Y S GT P++ D R I L KA HPLL
Sbjct: 259 DFMFTKAKYGRSIKGTKPSM---NDKGR-------------------IKLFKARHPLL-- 294
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
+E A V DI
Sbjct: 295 -----------GIEEA---------------------------------------VANDI 304
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
F+ +VITGPNTGGKT+ LKT+G+ ++A++GL I + + +++ F SV+ADIGDE
Sbjct: 305 FLGEDFTTIVITGPNTGGKTVTLKTIGICTLLAQAGLPIPALDGSELAVFQSVYADIGDE 364
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+ + QSLVL DE+GAGT+P EG AL +S+L+ + G+
Sbjct: 365 QSIEQSLSTFSSHMVNIVDILDKVDFQSLVLFDELGAGTDPQEGAALAISILDYVYKRGA 424
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK Y+ + NA +EFD L+PTY++L GVPGRS+A I++RLGL
Sbjct: 425 RV-VATTHYPELKAYGYNREGVVNASVEFDVETLRPTYRLLLGVPGRSNAFEISKRLGLS 483
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V+ AR G S ++ +I +E K + EA L + LH++L +++
Sbjct: 484 DDVIDYARVHIGTDSKQVENMIASLEESKRMAEKERMEANELLKSADKLHRDL---QKQT 540
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+E+ ++ V K D A + A+++ R L + R Q+ L
Sbjct: 541 VEYY-EKKDELVDKAKDKAIKIVEEAKREAEEII------RELRNLRIQKNAEVKEHELI 593
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
K T N ++T Q+ R EL GD V V SF
Sbjct: 594 EAKKRLEDATPTKNMKKT--------------------QASRTDSKEL-RPGDDVKVLSF 632
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+KG +++ + + E VQ+G +K ++ DI
Sbjct: 633 GQKGVLLE-KTGEAEWAVQMGILKMKVETKDI 663
>gi|333395595|ref|ZP_08477414.1| MutS family DNA mismatch repair protein [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
Length = 785
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 231/423 (54%), Gaps = 56/423 (13%)
Query: 389 QVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+VS + HP V DI + + R ++ITGPNTGGKTI LKT+GL +MA++GL
Sbjct: 300 EVSLRQARHPLIDPAKIVANDIILGQDYRAMIITGPNTGGKTITLKTMGLLQLMAQAGLF 359
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + E ++V FD++FADIGDEQS+ Q+LSTFSGH+ I +I++Q +SLVL+DE+GAG
Sbjct: 360 IPAGEESQVGVFDNIFADIGDEQSIEQNLSTFSGHMANIVSILAQVDDRSLVLIDELGAG 419
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L+ + S + +ATTH+ ELK Y+ NA MEFD L+PTY
Sbjct: 420 TDPQEGAALAIAILDQLGTTNSYV-LATTHYPELKAYGYNRPGTINASMEFDVETLQPTY 478
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+L G+PGRS+A IA RLGL +V A+QL A S ++N +I ++E + +
Sbjct: 479 HLLIGIPGRSNAFEIASRLGLADNIVAQAKQLITADSQDLNNMISDLEAQRKAAENERLQ 538
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
A+ L + LH +D A+ + + QQL + +
Sbjct: 539 AKKLLTEAEQLH-------------------------ADLASASTEFISAREQQLDKAKN 573
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +V AQ+ + + +H + + Q QQ TV EH A+ + + ++K
Sbjct: 574 KANQIV-DHAQK---ESDRIIHDLREMQKQ-------QQQTVK--EHELIAAKTGLANLK 620
Query: 742 QSPRV---------KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
Q + KR + VGD V V+++G+ G ++ + K+ VQ+G +K +
Sbjct: 621 QEKALAKNKVLRHEKRRQALKVGDDVIVTTYGQHGVLLN-QLDKKHWEVQLGILKMKVAV 679
Query: 793 TDI 795
D+
Sbjct: 680 DDL 682
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG+ IEP S + LN+ L+Q + + + +L L+E + DEI + + QL
Sbjct: 216 SASGLTLFIEPQSVMDLNNRLRQRQLEEQQEIQRILAELSEAIAPYQDEITQNATILGQL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
D +NA+A Y+ + T P + L ++ P+
Sbjct: 276 DFINAKARYAKAIKATEPLLNLDNEVSLRQARHPL 310
>gi|315649009|ref|ZP_07902103.1| MutS2 family protein [Paenibacillus vortex V453]
gi|315275690|gb|EFU39044.1| MutS2 family protein [Paenibacillus vortex V453]
Length = 789
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 221/401 (55%), Gaps = 40/401 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + +++TGPNTGGKT+ LKT+GL +MA SGL I + E +++ FD+++A
Sbjct: 317 VPLDVELGNTYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ Q T +SLVLLDE+GAGT+P EG+AL +S+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIIRILGQMTQKSLVLLDEVGAGTDPAEGSALAISILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + IATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRMGCRM-IATTHYSELKAYAYERKGVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV----HEARHFLMLSRNLHK 634
RLGLPG +++ AR E+ E + Q +EH+ E RH + R +
Sbjct: 496 RLGLPGSILEFAR-------GEVKE--------EDQRVEHMIASLEENRHTAEMEREKAE 540
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ RK +E + ++QK+ + LV K+ + +ARS + L
Sbjct: 541 QV----RKEMEELRVRHEHELQKLEEQKD---KLVDKARMEARQIVDKARSEAEEIISDL 593
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R A + K +H L + ++ +D E + + KQ +R+ P
Sbjct: 594 RKIALEEGASVK----EHKLIAARKR--LDDAEPQQGKKTGGQRSAKQ----QRSIEP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S +KG V+++ SK E VVQ+G MK + D+
Sbjct: 642 GDEVRVFSLNQKGHVVEMTGSK-EAVVQLGIMKMKVALDDL 681
>gi|420263850|ref|ZP_14766486.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
gi|394769292|gb|EJF49155.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
Length = 787
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 226/397 (56%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL IL+ E +++ F+ +FA
Sbjct: 317 VPNDITIGKDYQAVVITGPNTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVDVLKKIDETSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-AKSAYVMATTHYPELKVYGYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A+++ S ++NE+I ++E + E RH + + LH+
Sbjct: 496 RLGLPETIIDQAKEIMDGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQE--- 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
LE S F + +K A AR + A Q+ A + + ++++ +
Sbjct: 553 -----LEAAYSYFFEEREK---ELAKAR----QKANQIVEEAKEESEKIIADIRKMQLAG 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q TKV K ++ + + + + + EH + V++ K + +K GD V
Sbjct: 601 GQ----TKV-KEHELIDARTKLSGLQQEEH--LQKNKVLQKAKAAKTLKE------GDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++G ++K + K + VQ+G +K + TD+
Sbjct: 648 LVTSYGQRGVLLK-KAGKNQWQVQIGILKMNLPETDL 683
>gi|313884242|ref|ZP_07818008.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
gi|312620689|gb|EFR32112.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
Length = 785
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 231/421 (54%), Gaps = 39/421 (9%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
+SP + VS ++ HP V +I I + R L+ITGPNTGGKTI LKT+G+ +M
Sbjct: 294 VSP-DRHVSLIQARHPLLDPKQVVANNIIIGQDYRTLIITGPNTGGKTILLKTLGILHLM 352
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
++GLHI + + +++ FD VFADIGDEQS+ QSLSTFSGH+ +I+ +T QSL+L
Sbjct: 353 GQAGLHIPAQKGSQIGLFDQVFADIGDEQSIEQSLSTFSGHMTNTIDILKHATYQSLLLF 412
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+G+GT+P EG AL ++L+ +G + T+ATTH+ ELK + NA MEF+
Sbjct: 413 DELGSGTDPQEGAALATAILDYLTGAG-MTTMATTHYPELKVYAHEAPHTINASMEFNAE 471
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
L PTY++L G+PGRS+A+ I++RLGLP +++ ARQ S INE++ +E + +
Sbjct: 472 TLAPTYRLLIGIPGRSNALEISQRLGLPDYILEKARQGVSQDSQSINEMVANLETERRRL 531
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
E H L + L K+ LRT + + DA LV K+ +
Sbjct: 532 EADHQETEHRLAQADQLLKD-LRT-----------EYDRWVTYKDA------LVEKAKHE 573
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
QA+ K Q++R + T + +HVL ++ D+++ P
Sbjct: 574 ANMKVDQAQKEADKLIQEIRDLQLEQGQNTTI--KEHVLID--KKGKFDQLKQPEN---- 625
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFTD 794
++ K R K + VG V V S+G++G+++ KV+ + VQ+G +K + D
Sbjct: 626 -LRKNKVLKRQKAKQELRVGQDVLVHSYGQRGSIVDKVD--DKTFTVQMGILKMNLPAKD 682
Query: 795 I 795
+
Sbjct: 683 L 683
>gi|228993275|ref|ZP_04153191.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
gi|228766343|gb|EEM14986.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
Length = 786
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 225/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 YNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR G + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHC--ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDERLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ +VK T +
Sbjct: 600 AQ---------------LANVKDHELIEAKSRLEGAAPELVK--KQRVKVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +D+
Sbjct: 643 AGDEVKVLTFGQKGQLLK-KVSDNEWNVQIGILKMKVKESDM 683
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP V LN+ LQ+AR + E +L+ LTE++ ++ D + + I L
Sbjct: 217 SASGQTLFIEPQVIVELNNALQEARVKEKQEVERILMVLTEEVALEADTVLANVEVIANL 276
Query: 284 DVVNARATYSLSFGGTSP 301
D + ARA Y+ T P
Sbjct: 277 DFIFARAFYAKRIKATKP 294
>gi|420145859|ref|ZP_14653308.1| MutS2 protein [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398402478|gb|EJN55814.1| MutS2 protein [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 785
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 230/423 (54%), Gaps = 56/423 (13%)
Query: 389 QVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+VS + HP V DI + + R ++ITGPNTGGKTI LKT+GL +MA++GL
Sbjct: 300 EVSLRQARHPLINPAKIVANDIILGQDYRAMIITGPNTGGKTITLKTMGLLQLMAQAGLF 359
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + E ++V FD++FADIGDEQS+ Q+LSTFSGH+ I +I++Q +SLVL+DE+GAG
Sbjct: 360 IPAGEESQVGVFDNIFADIGDEQSIEQNLSTFSGHMANIVSILAQVDDRSLVLIDELGAG 419
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L+ + S + +ATTH+ ELK Y+ NA MEFD L+PTY
Sbjct: 420 TDPQEGAALAIAILDQLGTTNSYV-LATTHYPELKAYGYNRPGTINASMEFDVETLQPTY 478
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+L G+PGRS+A IA RLGL +V A+QL A S ++N +I ++E + +
Sbjct: 479 HLLIGIPGRSNAFEIASRLGLADNIVAQAKQLITADSQDLNNMISDLEAQRKAAENERLQ 538
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
A+ L + LH +D A+ + + QQL +
Sbjct: 539 AKKLLTEAEQLH-------------------------ADLASASTEFISAREQQLDKAKD 573
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +V AQ+ + + +H + + Q QQ TV EH A+ + + ++K
Sbjct: 574 KANQIV-DHAQK---ESDRIIHDLREMQKQ-------QQQTVK--EHELIAAKTGLANLK 620
Query: 742 QSPRV---------KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
Q + KR + VGD V V+++G+ G ++ + K+ VQ+G +K +
Sbjct: 621 QEKALAKNKVLRHEKRRQALKVGDDVIVTTYGQHGVLLN-QLDKKHWEVQLGILKMKVAV 679
Query: 793 TDI 795
D+
Sbjct: 680 DDL 682
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG+ IEP S + LN+ L+Q + + + +L L+E + DEI + + QL
Sbjct: 216 SASGLTLFIEPQSVMDLNNRLRQRQLEEQQEIQRILAELSEAIAPYQDEITQNATILGQL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
D +NA+A Y+ + T P + L ++ P+
Sbjct: 276 DFINAKARYAKAIKATEPLLNLDNEVSLRQARHPL 310
>gi|336393179|ref|ZP_08574578.1| MutS family DNA mismatch repair protein [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 785
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 230/423 (54%), Gaps = 56/423 (13%)
Query: 389 QVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+VS + HP V DI + + R ++ITGPNTGGKTI LKT+GL +MA++GL
Sbjct: 300 EVSLRQARHPLIDPAKIVANDIILGQDYRAMIITGPNTGGKTITLKTMGLLQLMAQAGLF 359
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + E ++V FD++FADIGDEQS+ Q+LSTFSGH+ I +I++Q +SLVL+DE+GAG
Sbjct: 360 IPAGEESQVGVFDNIFADIGDEQSIEQNLSTFSGHMANIVSILAQVDDRSLVLIDELGAG 419
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L+ + S + +ATTH+ ELK Y+ NA MEFD L+PTY
Sbjct: 420 TDPQEGAALAIAILDQLGTTNSYV-LATTHYPELKAYGYNRPGTINASMEFDVETLQPTY 478
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+L G+PGRS+A IA RLGL +V A+QL A S ++N +I ++E + +
Sbjct: 479 HLLIGIPGRSNAFEIASRLGLADNIVAQAKQLITADSQDLNNMISDLEAQRKAAENERLQ 538
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
A+ L + LH +D A+ + + QQL +
Sbjct: 539 AKKLLTEAEQLH-------------------------ADLASASTEFISAREQQLDKAKD 573
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +V AQ+ + + +H + + Q QQ TV EH A+ + + ++K
Sbjct: 574 KANQIV-DHAQK---ESDRIIHDLREMQKQ-------QQQTVK--EHELIAAKTGLANLK 620
Query: 742 QSPRV---------KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
Q + KR + VGD V V+++G+ G ++ + K+ VQ+G +K +
Sbjct: 621 QEKALAKNKVLRHEKRRQALKVGDDVIVTTYGQHGVLLN-QLDKKHWEVQLGILKMKVAV 679
Query: 793 TDI 795
D+
Sbjct: 680 DDL 682
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG+ IEP S + LN+ L+Q + + + +L L+E + DEI + + QL
Sbjct: 216 SASGLTLFIEPQSVMDLNNRLRQRQLEEQQEIQRILAELSEAIAPYQDEITQNATILGQL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
D +NA+A Y+ + T P + L ++ P+
Sbjct: 276 DFINAKARYAKAIKATEPLLNLDNEVSLRQARHPL 310
>gi|257877500|ref|ZP_05657153.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
gi|257811666|gb|EEV40486.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
Length = 787
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL IL+ E +++ F+ +FA
Sbjct: 317 VPNDITIGKDYQAVVITGPNTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I ++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-AKSAYVMATTHYPELKVYGYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A+++ S ++NE+I ++E + E RH + + LH+
Sbjct: 496 RLGLPDTIIDQAKEIMDGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQE--- 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
LE S F + +K A AR + A Q+ A + + ++++ +
Sbjct: 553 -----LEAAYSYFFEEREK---ELAKAR----QKANQIVEEAKEESEKIIADIRKMQLAG 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q TKV K ++ + + + + + EH + V++ K + +K GD V
Sbjct: 601 GQ----TKV-KEHELIDARTKLSGLQQEEH--LQKNKVLQKAKAAKTLKE------GDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++G ++K + K + VQ+G +K + TD+
Sbjct: 648 LVTSYGQRGVLLK-KAGKNQWQVQIGILKMNLPETDL 683
>gi|336400040|ref|ZP_08580828.1| MutS2 protein [Fusobacterium sp. 21_1A]
gi|336163237|gb|EGN66169.1| MutS2 protein [Fusobacterium sp. 21_1A]
Length = 778
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP V+ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESVISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFNEI 678
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 123 LVKSAIREVRRASPLRPNEALAVVALLQFSETL---QLSLRAAIKEDADLYIRFMPLTQM 179
+ KS + E+ + LR E + + L+ E + ++ IK+DA L +R + L +
Sbjct: 102 IFKSKLDELGKYKQLR--ETIGNIPNLRLIEDVINKTINPEKEIKDDASLDLRDIRLHK- 158
Query: 180 LYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRTGADQLSFKGLL------ 222
+ ++M I+ + E LF E ++ GR+ D FKGL+
Sbjct: 159 --KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPVKYD---FKGLIKGIEHD 212
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
SSSG IEPLS V LN+++++ + +LL + E ++ + D+I + ++
Sbjct: 213 RSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAELLRNNKDDILTIGEKVMY 272
Query: 283 LDVVNARATYS 293
LD++NA++ Y+
Sbjct: 273 LDILNAKSIYA 283
>gi|52081359|ref|YP_080150.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404490236|ref|YP_006714342.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|81690944|sp|Q65GE2.1|MUTS2_BACLD RecName: Full=MutS2 protein
gi|52004570|gb|AAU24512.1| DNA mismatch repair protein MutSB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349238|gb|AAU41872.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
Length = 785
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 217/403 (53%), Gaps = 33/403 (8%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L L VP DI + + +VITGPNTGGKT+ LKT+GL MMA+SGLH+ + E ++
Sbjct: 312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAV 371
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
FD VFADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL +
Sbjct: 372 FDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAI 431
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ ++G+ + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+
Sbjct: 432 SILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSN 490
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I++RLGLP ++ A+ A E++ +I +E K + + E + L
Sbjct: 491 AFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEAL 550
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
H++ L+ S+ K K+ + A K+A+++ + +A ++
Sbjct: 551 HRD--------LQQQISEWQEKKDKLYEEAE------QKAAEKVKAAMKEADDII----- 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
QSL K H + + K A S K Q KR P
Sbjct: 592 -------QSLRMI---KEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELKP 641
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 --GDEVKVLTFGQKGTLLE-KTGAAEWNVQIGILKMKVKEKDL 681
>gi|319647266|ref|ZP_08001488.1| MutS2 protein [Bacillus sp. BT1B_CT2]
gi|317390613|gb|EFV71418.1| MutS2 protein [Bacillus sp. BT1B_CT2]
Length = 785
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 217/403 (53%), Gaps = 33/403 (8%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L L VP DI + + +VITGPNTGGKT+ LKT+GL MMA+SGLH+ + E ++
Sbjct: 312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAV 371
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
FD VFADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL +
Sbjct: 372 FDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAI 431
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ ++G+ + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+
Sbjct: 432 SILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSN 490
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I++RLGLP ++ A+ A E++ +I +E K + + E + L
Sbjct: 491 AFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEAL 550
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
H++ L+ S+ K K+ + A K+A+++ + +A ++
Sbjct: 551 HRD--------LQQQISEWQEKKDKLYEEAE------QKAAEKVKAAMKEADDII----- 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
QSL K H + + K A S K Q KR P
Sbjct: 592 -------QSLRMI---KEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELKP 641
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 --GDEVKVLTFGQKGTLLE-KTGAAEWNVQIGILKMKVKEKDL 681
>gi|304436503|ref|ZP_07396477.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370549|gb|EFM24200.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 785
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 209/786 (26%), Positives = 354/786 (45%), Gaps = 148/786 (18%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAI------- 104
ES +VLE++K+ ++S+A T+ G+E + + S + Y RL ET A+
Sbjct: 4 ESFKVLEYEKIKTRLASYAATAYGKERCRSIMPSSD--YDHVARLQRETEEAVRVAQIQP 61
Query: 105 ----------EMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPN-----EALAVVAL- 148
E+ K + L +L LVKS I +R + E L +A
Sbjct: 62 PPFDGIHHLQEILKRAGRGILLELDELRLVKSTIGGMRDVKCFFRDLSADAELLKDLARR 121
Query: 149 LQFSETLQLSLRAAIKEDADLYIRFMPLTQMLY-----------QLMDMLIRNENNESLF 197
++ L+ +L+AAI E + P+ + + + + ++ + + +F
Sbjct: 122 IEILGMLERNLKAAIDEYGNFRDDASPVLRRITNELRTAQSRVKERLSSILHDAAYQKMF 181
Query: 198 LE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
E V+ R I + S F G++ S+SG IEPL+ V LN+ ++Q +
Sbjct: 182 QEAIVTVRDERYVIPVKQEYRSQFPGVIHDQSASGATLFIEPLAIVELNNTVRQMGIARE 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ ++ LT ++ D + + LD++ ARA+ + P +
Sbjct: 242 QEILRIMQRLTGEIARSADVLSANCTILSDLDLIFARASLAREMSAYPPIL--------- 292
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
R+ ++L +A HPL
Sbjct: 293 -------------NRDGYVHLRRARHPL-------------------------------- 307
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
L P ++ VPIDI + + L+ITGPNTGGKT+ +KT+G+
Sbjct: 308 ----------LPPDKV----------VPIDIELGKTFSTLLITGPNTGGKTVSMKTLGIL 347
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSL 492
+M++SG + + +++P + +++ADIGDEQS+ QSLSTFS H + I II ++T L
Sbjct: 348 ALMSQSGCFLPAESGSEIPIYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATFGDL 407
Query: 493 VLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
VLLDE+GAGT+P EG AL S++E F + + T+ATTH+ +LKT Y+ ENA +EF
Sbjct: 408 VLLDEVGAGTDPDEGAALARSIIEHFLMN-RIATVATTHYADLKTYAYTQQGVENASVEF 466
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D L+PTY++L G+PG S+A +I+ +LGLP +V A + A+ V+ ++ER K
Sbjct: 467 DLKTLRPTYRLLIGIPGASNAFSISRQLGLPEEIVARAEEYVSEDHAQFETVVHDLERAK 526
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKS 672
T + E KN L +++ A R R R+ +S
Sbjct: 527 TIYEE----------------KNQLLYKKETDVGRAESRLRA----------ERAAFEQS 560
Query: 673 AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATA 732
Q+L +AR + ++ R SA +++ K + H + + +
Sbjct: 561 KQELL---HKAREEANNIVREARRSAEETIQSLKEQFDDHGIKERQKAIQAARSRLNEAY 617
Query: 733 SSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
++ I R R GD V++ + ++GTV+ V+ +E+ VQVG ++ ++K
Sbjct: 618 VHNISPKIPAEGRPVRPGEIQSGDTVYIRTLAQEGTVLSVQ--GKELSVQVGGLRTMVKM 675
Query: 793 TDIVTY 798
D T+
Sbjct: 676 -DACTF 680
>gi|357639256|ref|ZP_09137129.1| MutS2 family protein [Streptococcus urinalis 2285-97]
gi|418417299|ref|ZP_12990495.1| MutS2 protein [Streptococcus urinalis FB127-CNA-2]
gi|357587710|gb|EHJ57118.1| MutS2 family protein [Streptococcus urinalis 2285-97]
gi|410871775|gb|EKS19721.1| MutS2 protein [Streptococcus urinalis FB127-CNA-2]
Length = 778
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 213/376 (56%), Gaps = 42/376 (11%)
Query: 398 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 457
PV D++ + +VITGPNTGGKTI LKT+GLA +M +SGL IL+ + +K+ FD++F
Sbjct: 310 PVANDLYFRDELTEIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADKGSKIALFDAIF 369
Query: 458 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 517
ADIGDEQS+ QSLSTFS H+ QI +II + + SLVL DE+GAGT+P EG +L M++LE
Sbjct: 370 ADIGDEQSIEQSLSTFSSHMTQIVSIIEAADANSLVLFDELGAGTDPQEGASLAMAILEH 429
Query: 518 FAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIA 577
S + T+ATTH+ ELK D+ ENA M FD L+PTY+ + GVPGRS+A IA
Sbjct: 430 LRLS-QVKTMATTHYPELKAYGIETDYVENASMAFDTETLRPTYRFMQGVPGRSNAFEIA 488
Query: 578 ERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRNLHK 634
RLGL ++V +A + ++N +I ++E L+H+ E NL
Sbjct: 489 RRLGLSTVIVNDAENMTDT-DGDVNHIIEQLESQTLDVKKRLDHIKEVEQ-----ENLKF 542
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
N R ++K+ + H+ ++L + +++ +V K A +
Sbjct: 543 N-----------------RALKKLYN------EFSHERDKELAKAVRESQEIVEK-ALEE 578
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ ++LH K V+ + Q T+ +H + + V+K + K+ P++
Sbjct: 579 SDNILKNLHEKSSLKPHQVIEAKSQLKTLIPEQH--LSQNKVLK------KAKKVRAPHI 630
Query: 755 GDLVHVSSFGKKGTVI 770
GD + V+S+G++GT++
Sbjct: 631 GDDIIVTSYGQRGTLV 646
>gi|225574101|ref|ZP_03782712.1| hypothetical protein RUMHYD_02166 [Blautia hydrogenotrophica DSM
10507]
gi|225038701|gb|EEG48947.1| MutS2 family protein [Blautia hydrogenotrophica DSM 10507]
Length = 793
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 208/409 (50%), Gaps = 78/409 (19%)
Query: 204 HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLL 260
+GR C+ A+ + G++ S GS IEP+S V LN++L+Q K E VL
Sbjct: 192 NGRYCLPVKAEYKGQVPGMIHDQSSTGSTLFIEPMSVVKLNNDLRQLEIQEQKEIEIVLS 251
Query: 261 ALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
L+E+ + + LN +I+LD + ARA +L + P
Sbjct: 252 DLSEQAAQYQEVLTDNLNILIELDFIFARAGLALEHNASEPQF----------------- 294
Query: 321 KVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKD 380
+ I L KA HPL+ HK++
Sbjct: 295 -----NTDGKIQLKKARHPLI---HKKQV------------------------------- 315
Query: 381 TNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
VPIDI + +LV+TGPNTGGKT+ LKTVGL +M +SGL
Sbjct: 316 ------------------VPIDIRLGDDFDLLVVTGPNTGGKTVSLKTVGLLTLMGQSGL 357
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + +++ + F+ V+ADIGDEQS+ QSLSTFS H+ + + + ++T +SLVL DE+GA
Sbjct: 358 HIPAGDHSVLSVFEEVYADIGDEQSIEQSLSTFSSHMTNVVSFLEKATDKSLVLFDELGA 417
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL +++L G + T+ATTH+ ELK S ENA EFD L+PT
Sbjct: 418 GTDPTEGAALAIAILSHLHRQG-IRTMATTHYSELKVYALSTPGVENASCEFDVETLRPT 476
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
Y++L GVPG+S+A I+ +LGLP +++ A++ +VI ++E
Sbjct: 477 YRLLIGVPGKSNAFAISSKLGLPDFIIEKAKEQISEQDESFEDVISKLE 525
>gi|167037192|ref|YP_001664770.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040669|ref|YP_001663654.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter sp. X514]
gi|300914710|ref|ZP_07132026.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307724056|ref|YP_003903807.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|320115610|ref|YP_004185769.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166854909|gb|ABY93318.1| MutS2 family protein [Thermoanaerobacter sp. X514]
gi|166856026|gb|ABY94434.1| MutS2 family protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300889645|gb|EFK84791.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307581117|gb|ADN54516.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|319928701|gb|ADV79386.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 791
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 179/619 (28%), Positives = 292/619 (47%), Gaps = 138/619 (22%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGS 111
+++ LE+DK+ + + + LG++ L I + ++ R LD N AI + +G
Sbjct: 9 AIKSLEFDKIVEFIVGYCDSDLGKQKALD--IVIKKDIEEIERELDLLNEAISFISSYGG 66
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
S + + I++ + S L E L + L ++ + +++D ++
Sbjct: 67 ISFAFEDI-----RDYIKKAQIDSVLYNQELLKIKKFLNLVSQIKGYFKNL--QESDRFV 119
Query: 172 RF-------MPLTQMLYQLMDMLIRNEN-------------------NESLFLEVSSI-- 203
R +P+ + ++ +++I + NE + ++SI
Sbjct: 120 RLKEYDKKVLPIKNLEKRIENIIISEDEIADDASPMLKALRRQKLSINEKIRATLNSIIS 179
Query: 204 --------------HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
GR + + S FKG++ SSSG IEP+ V LN+EL+Q
Sbjct: 180 TRQKELQEPIITVRQGRYVVPVKQEYRSTFKGIVHDQSSSGATLFIEPMQVVDLNNELRQ 239
Query: 247 ARASVTKAEEDVLLALTEKM----QVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
+ + +L L++++ Q+ ++IE + +LD + A+A
Sbjct: 240 VELKEKQEIQRILFELSQEVKKYSQILFNDIEI----VSELDFIFAKA------------ 283
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
K SL + V ++++ I L KA HPL+ N E
Sbjct: 284 -------KYSLKLKAVRPELNTM---GYINLKKARHPLI------------------NQE 315
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
+ VPIDI I ++ LVITGPNTGGK
Sbjct: 316 V----------------------------------VVPIDIHIGKQFNTLVITGPNTGGK 341
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKTVGL +MA +GL+I + E ++V F+ VF DIGDEQS+ QSLSTFS H+ I +
Sbjct: 342 TVTLKTVGLLTLMAMAGLNIPAEEKSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+GAGT+P+EG AL MS+L+ + G+ TIATTH+ ELK
Sbjct: 402 ILQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGA-KTIATTHYSELKQYALKI 460
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEIN 602
ENA +EFD LKPTYK++ +PG+S+A I++RLGLP +++NAR+ + +
Sbjct: 461 PGVENASVEFDVETLKPTYKLIISLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE 520
Query: 603 EVIIEMERFKTQFLEHVHE 621
++I ++E + + + HE
Sbjct: 521 DIIADVESKRRELEKANHE 539
>gi|373465637|ref|ZP_09557092.1| MutS2 family protein [Lactobacillus kisonensis F0435]
gi|371759887|gb|EHO48594.1| MutS2 family protein [Lactobacillus kisonensis F0435]
Length = 787
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 279/598 (46%), Gaps = 121/598 (20%)
Query: 207 LCIRTGADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTE 264
L IR Q F G++ S+SG +EP + V +N++L++ + + +L LT
Sbjct: 199 LPIRADYKQ-HFGGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEVRRILGELTN 257
Query: 265 KMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSS 324
++ +E+ +N + QLD VNA+A Y+ G P I
Sbjct: 258 LLRPYRNELMTNMNLVGQLDFVNAKAKYAHQTGSIQPRI--------------------- 296
Query: 325 SEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLS 384
++ + L KA HP++ + + D+E
Sbjct: 297 -SKDNVVNLRKARHPMI-----DRDKVVANDIE--------------------------- 323
Query: 385 PSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
I K +++TGPNTGGKTI +KT+GL +M +SGL I +
Sbjct: 324 --------------------IGDKYSTIIVTGPNTGGKTITMKTIGLLQLMGQSGLFITA 363
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+E +++ FD VFADIGDEQS+ +LSTFS H+ I +++ + ++ SLVLLDE+GAGT+P
Sbjct: 364 NEDSQIGAFDEVFADIGDEQSIEANLSTFSSHMDNIISMLDKISNNSLVLLDELGAGTDP 423
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++++A +G L IATTH+ ELK Y+ NA MEFD L+PTY+ L
Sbjct: 424 KEGAALAMAIIDAIHATGCEL-IATTHYPELKAFAYNRSGIINASMEFDVNTLRPTYRFL 482
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
G+PG+S+A+NIA++LG P ++ NAR + + +IN +I E+ + + + +
Sbjct: 483 MGIPGQSNALNIAQKLGFPKQIIDNARSFTDSKNQDINNMIAELTAQTKRAHDEADQLQK 542
Query: 625 FLMLSRNLHKNLLR-------TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
L S LH+ L R ++ E + R V++ A + +H+ +Q+
Sbjct: 543 QLAESTKLHQELTNQFNKYQAQRDRLTEQAQEKANRVVEEAKQQADKIIADLHQKQKQIG 602
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
A + L+ + + + + +L KV T +K +H
Sbjct: 603 KVAIKENELIDAKGELNKLEVAPNLKKNKV-------------LTKEKEKHNF------- 642
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ GD V V S+G++GT+I E + VQ+G +K + DI
Sbjct: 643 ---------------HTGDDVLVKSYGQQGTLIGKEKNG-TWDVQIGILKMKIDEADI 684
>gi|154686993|ref|YP_001422154.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens FZB42]
gi|189030421|sp|A7Z7E7.1|MUTS2_BACA2 RecName: Full=MutS2 protein
gi|154352844|gb|ABS74923.1| MutSB [Bacillus amyloliquefaciens FZB42]
Length = 785
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 212/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P + + I L
Sbjct: 268 QDVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NL 636
+L
Sbjct: 553 DL 554
>gi|373112741|ref|ZP_09526968.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371654881|gb|EHO20242.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 518
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 247/529 (46%), Gaps = 114/529 (21%)
Query: 74 LGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR 133
+G + +LW IN +LR A +E DL K+ +R+
Sbjct: 81 IGTYLEVDELWDINM----NLRFFRIFQAQLE--------------DLGKYKALRDYMRQ 122
Query: 134 ASPLRPNEAL---AVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRN 190
SPLR E L AV + Q + L LR D+ I L Q + + D L
Sbjct: 123 VSPLRLIEDLISKAVDSEKQIKDEASLDLR-------DIRIHKKMLAQNIRRKFDELFEE 175
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLL------LSSSGIGSVIEPLSAVPLND 242
+ F E V+ GR+ + D FKGL+ SSSG IEPLS V LN+
Sbjct: 176 ASIAVAFQERIVTERDGRMVVPVKVD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 243 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 302
++++ + +LL L+E+++ DE+ K+ I+ LD + A+A + L P
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFGLEEACHVPT 292
Query: 303 IFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTE 362
I + + +YL KA HP +
Sbjct: 293 I----------------------QGKEILYLEKARHPFI--------------------- 309
Query: 363 LRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGK 422
P E VP+ I + R+L+ITGPNTGGK
Sbjct: 310 ----------------------PKE---------KVVPLTFEIGKDYRILLITGPNTGGK 338
Query: 423 TICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGN 482
T+ LKT GL +MA SG+ I +SE++K+ +F VFADIGDEQS+ QSLS+FS H+ +
Sbjct: 339 TVALKTAGLLTLMALSGIPIPASEHSKIGFFQGVFADIGDEQSIEQSLSSFSAHVTNLQE 398
Query: 483 IISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSN 542
I+ + LVLLDE+G+GT+P EG+A MS+++ E I TTH+ E+K Y+
Sbjct: 399 ILREVHRNCLVLLDELGSGTDPTEGSAFAMSIIDYLKEK-KCNAIITTHYSEVKAHGYNE 457
Query: 543 DFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ E A MEFD L PTY++L G+PG S+A+ IA+RLG+P ++ A+
Sbjct: 458 EGIETASMEFDTATLSPTYRLLMGIPGESNALTIAKRLGVPQDIIDKAQ 506
>gi|392391882|ref|YP_006428484.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390522960|gb|AFL98690.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 789
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 224/419 (53%), Gaps = 49/419 (11%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
++S ++ HP VP+ I + + +V+TGPNTGGKT+ LKT+GL MA+ GLHI
Sbjct: 300 EISLVQARHPLLTGKVVPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ ++V F +FADIGDEQS+ QSLSTFSGH+K I I+ ++ +SL+LLDE+GAGT
Sbjct: 360 PAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVQKADRRSLILLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG+AL M+++ E G+ + +ATTH+G LK Y+ ENA +EFD L+PTY+
Sbjct: 420 DPTEGSALAMAIIAELHERGARI-VATTHYGALKNFAYNTTRVENASVEFDSESLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGLP V+ AR ++ ++I +E + +
Sbjct: 479 LLVGIPGKSNAFYIAGRLGLPEGVLDRARTFVTEREMQVADLIENLEDTQREI------- 531
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+L K R R+ +E + K QK+ D + L+ + Q +
Sbjct: 532 --------DLEKRRAREERQAIEKESIGLKEKSQKLEDE---YQELMAMAKDQAVEIVRE 580
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ-----QTTVDKVEHPATASSSV- 736
AR + +L+ L + K+Q + Q V + + PA A+ V
Sbjct: 581 ARREAERLIDELK------LALKEERKDQQAIERTRQGIRKLSNKVGEQDTPARATQGVD 634
Query: 737 VKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++IK +G +V+++ +KG V+K+ + EI VQ G +K + ++I
Sbjct: 635 PQEIK------------LGQMVYMTKLRQKGQVLKLPNASGEIFVQAGVIKLNVPLSEI 681
>gi|331701294|ref|YP_004398253.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
gi|329128637|gb|AEB73190.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
Length = 788
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 293/594 (49%), Gaps = 107/594 (18%)
Query: 205 GRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR + A+ + F G++ S+SG +EP + V +N++L++ + + +L
Sbjct: 195 GRFVLPIKAEYKQRFGGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAEVRRILAE 254
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
LT ++ DE+ ++ + QLD VNA+A ++ + G P + P+++
Sbjct: 255 LTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMPKVS-PKNV------------ 301
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
I L KA HPL+ + Q D+E
Sbjct: 302 ---------INLRKARHPLI-----PRDQVVANDIE------------------------ 323
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+ + +++TGPNTGGKTI +KTVGL +M +SGL
Sbjct: 324 -----------------------LGDQYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLF 360
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I ++E +++ FD+VFADIGDEQS+ +LSTFS H+ I +I+ Q++ SLVLLDE+GAG
Sbjct: 361 ITANEDSQIGVFDNVFADIGDEQSIEANLSTFSSHMDNIISILKQTSKDSLVLLDELGAG 420
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL M++++AF + G L IATTH+ ELK Y+ NA MEFD L+PTY
Sbjct: 421 TDPKEGAALAMAIIDAFHQIGGEL-IATTHYPELKAFAYNRQGIINASMEFDVETLQPTY 479
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ L G+PG+S+A+NIA +LG+P ++ AR + + +IN +I E+ T + H+
Sbjct: 480 RFLLGIPGQSNALNIASKLGMPAAIIDQARAFTDSENQDINNMIEEL----TAQTKRAHD 535
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L + L + R L+H +F K + + LV ++ QQ
Sbjct: 536 E------ADELDQQLKESTR--LQHDLQDKFTKYESQKE------RLVEQAKQQANQVVE 581
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A+ + L +Q KV ++ L + ++++E +A S +
Sbjct: 582 EAKKKADRIIDDLHQKQAQ---VGKVAVKENELID--AKGALNQLE---SAPSLTKNKVL 633
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + K P GD V V S+G++GT+++ + + VQ+G +K ++ +D+
Sbjct: 634 RKEKAKHDFHP--GDDVLVKSYGQQGTLLRKDKN-HTWDVQIGILKMQIEESDL 684
>gi|452856510|ref|YP_007498193.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080770|emb|CCP22535.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 785
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 211/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P + + I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|336419167|ref|ZP_08599433.1| MutS2 protein [Fusobacterium sp. 11_3_2]
gi|336163858|gb|EGN66772.1| MutS2 protein [Fusobacterium sp. 11_3_2]
Length = 778
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNKEILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFNEI 678
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILIIGEKVMYLDILNAKSIYA 283
>gi|366166669|ref|ZP_09466424.1| MutS2 family protein [Acetivibrio cellulolyticus CD2]
Length = 793
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 213/398 (53%), Gaps = 28/398 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID +I + LV+TGPNTGGKT+ LKTVGL +M ++GL I ++E ++ F VFA
Sbjct: 318 VPIDFWIGDEFDTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLQIPANEGTEISVFGKVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I NI+ S SLVL DE+GAGT+P EG AL M++LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENVDSSSLVLFDELGAGTDPTEGAALAMAILEHL 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G + +ATTH+ +LK + ENAC EFD LKPTYK+L GVPGRS+A I+
Sbjct: 438 KERGCTI-VATTHYSQLKVYAVTTPHVENACCEFDVETLKPTYKLLIGVPGRSNAFAISN 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V+ A+ + + ++++ +E+ Q +A L L +N +
Sbjct: 497 RLGLIDSIVERAKGYLTSEEIKFEDMLMSIEKNLNQSESEKRQA-QVLKLEAEKIRNEIE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++K E RK + +A AR ++ + + S+ R + Q +
Sbjct: 556 EQKKRFED------RKENIVKEAREEARRVLLDAKHEAENILSEMRRI------QREKES 603
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ-SPRVKRTELPNVGDL 757
SQS K ++ + N + + P +++VK K P GD
Sbjct: 604 SQS---QKEAEDMRLKIKNKIDNIEEALSKPIIPRNTLVKPPKNLKP----------GDS 650
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V + + +KGTV+ + E +VQ G MK + T++
Sbjct: 651 VLIINLNQKGTVVALPDKNGEAIVQAGIMKINLHITNL 688
>gi|429506149|ref|YP_007187333.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|429487739|gb|AFZ91663.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 785
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 211/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P + + I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|410667688|ref|YP_006920059.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105435|gb|AFV11560.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 793
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 217/400 (54%), Gaps = 33/400 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + R L+ITGPNTGGKT+ LKTVGL V+MA++GLHI + E +P +VFA
Sbjct: 314 VPLDLHLGRDFDCLIITGPNTGGKTVALKTVGLLVVMAQAGLHIPAGERTVLPVLQNVFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFSGH+K I I+ Q SLVLLDE+GAGT+P +G ALGM++L+
Sbjct: 374 DIGDEQSIEQSLSTFSGHMKNIVRILDQVGEGSLVLLDELGAGTDPEQGAALGMAILDRL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+L+ IATTH ELK ++ ENA +EFD L+PTY++ GVPG S+A IA
Sbjct: 434 INKGALI-IATTHFSELKIFAHTRQRAENASVEFDSRTLQPTYRLSIGVPGESNAFEIAA 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL VV+ AR E++++I +H+ E F S L R
Sbjct: 493 RLGLDSEVVERARSFLRPEQRELSDLI-----------KHLKED-QFAASSARAEAELER 540
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHKRAQQLRPS 697
+E + R+ +++ + S+ H+ A++L +A +A L+ +++R
Sbjct: 541 AE---VEKLKEKLRREEERLRNKQQEILSMAHEEARELVRTARREAEQLIRFLREKMRQE 597
Query: 698 ASQSL--HCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
++ V + L+ ++ AT S+ DI + + G
Sbjct: 598 DARIALEEAQAVRQKLGDLSGRIEERAA------ATEESAFAGDIPDTLK--------PG 643
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D+V + F ++G VI E++VQVG +K + ++
Sbjct: 644 DVVAIPRFHQEGYVISPPGPDGEVLVQVGALKLHLPIKEL 683
>gi|260495808|ref|ZP_05815929.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
gi|260196655|gb|EEW94181.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
Length = 778
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKEKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKINFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 123 LVKSAIREVRRASPLRPNEALAVVALLQFSETL---QLSLRAAIKEDADLYIRFMPLTQM 179
+ KS + E+ + LR E + + L+ E + ++ IK+DA L +R + L +
Sbjct: 102 IFKSKLDELGKYKQLR--ETIGNIPNLRLIEDVINKTINPEKEIKDDASLDLRDIRLHK- 158
Query: 180 LYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRTGADQLSFKGLL------ 222
+ ++M I+ + E LF E ++ GR+ D FKGL+
Sbjct: 159 --KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPVKYD---FKGLIKGIEHD 212
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
SSSG IEPLS V LN+++++ + +LL + E ++ + D+I + ++
Sbjct: 213 RSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAELLRNNKDDILTIGEKVMY 272
Query: 283 LDVVNARATYS 293
LD++NA++ Y+
Sbjct: 273 LDILNAKSIYA 283
>gi|194017274|ref|ZP_03055886.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus ATCC 7061]
gi|194011142|gb|EDW20712.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus ATCC 7061]
Length = 786
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 226/797 (28%), Positives = 355/797 (44%), Gaps = 176/797 (22%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREAT--LTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ V S+ ++LG+E LT L I +T Q L ++E I ++ GS
Sbjct: 7 LASLEFHKVKEKVMSYTASTLGKERAQDLTPLTDI-ETIQHLLEEVEEAQDVIRLK--GS 63
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALL---------------------- 149
L+ ++ A++ S L P+E + + LL
Sbjct: 64 APFG----GLTDIRRAVKRAEIGSTLSPSELMEIAGLLYAVKNMKHFLTSMYEDGVDIPR 119
Query: 150 --QFSETLQL------SLRAAIKEDAD-----------LYIRFMPLTQMLYQLMDMLIRN 190
++ETL L + + I ++ + L I+ L + ++ +IR+
Sbjct: 120 LHTYAETLILLPEIRKEIESCIGDNGEVLDHATPALRSLRIQLRSLESKVRDKLESMIRS 179
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
++ + + V+ + R I + S G ++ SSSG IEP V +N+ LQ
Sbjct: 180 QSASKMLSDTIVTIRNDRFVIPVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDVNNTLQ 239
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFL 305
Q R + E +L LTE + + E+ + + LD + A+A Y+ + T P +
Sbjct: 240 QTRLKEKQEVEKILQMLTESVSEHIGELLHNVKELQTLDFIFAKAKYAKTEKATKPAV-- 297
Query: 306 PQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRR 365
+ IYL +A HP
Sbjct: 298 --------------------NDQGEIYLKRARHP-------------------------- 311
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTIC 425
L P + V+ DI + + +VITGPNTGGKT+
Sbjct: 312 -----------------LLPRDQVVAN---------DIELGKDFSTIVITGPNTGGKTVT 345
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKT+GL +M ++GLHI E ++V FD VFADIGDEQS+ QSLSTFS H+ I +I+
Sbjct: 346 LKTLGLLTLMTQAGLHIPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 405
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
TS SLVL DE+GAGT+P EG AL MS+L+ ++ + + IATTH+ ELK Y+ +
Sbjct: 406 HLTSNSLVLFDELGAGTDPAEGAALAMSILDEVHQTNARV-IATTHYPELKAYGYNREGV 464
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
NA +EFD L PTY++L GVPGRS+A I++RLGLP ++ A+ A E++++I
Sbjct: 465 TNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLPDHLIDRAKADMHAEHNEVDQMI 524
Query: 606 IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR-------TRRKILEHCASQRFRKVQKI 658
+E K Q E +HE + + LHK L R + K+LE A Q+ + +KI
Sbjct: 525 ASLEDSKKQAEEELHETEVYRKEAEKLHKELQRQILEWNEQKDKLLEE-AEQKAK--EKI 581
Query: 659 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 718
A+ A ++ Q+L S+ RS R +++ F
Sbjct: 582 EQASKEAEDII----QELRSIKSEHRSFKEHELIDARKRLEEAV-------------PEF 624
Query: 719 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 778
+ + V+ +K GD V V +FG+KGT+++ + +E
Sbjct: 625 DRKKK------PEPAKKAVRQLKS------------GDEVKVLTFGQKGTLLE-QTGDKE 665
Query: 779 IVVQVGNMKWIMKFTDI 795
VQ+G +K +K D+
Sbjct: 666 WSVQIGILKMKVKEKDM 682
>gi|289766107|ref|ZP_06525485.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
gi|289717662|gb|EFD81674.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
Length = 778
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|315222241|ref|ZP_07864147.1| putative recombination and DNA strand exchange inhibitor protein
[Streptococcus anginosus F0211]
gi|315188574|gb|EFU22283.1| putative recombination and DNA strand exchange inhibitor protein
[Streptococcus anginosus F0211]
Length = 776
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 218/386 (56%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L +AHP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVAHPLIENAVANDLYFAADLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++V FD +FADIGDEQS+ QSLSTFS H+ I I+ QS SLVLLDE+GAGT+P
Sbjct: 357 DEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQSDENSLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK + +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETEGVQNASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL VV++A++L S ++N VI ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSDRVVKDAQELTDTDS-DVNRVI---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ ++ + L S + +
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIIDVA---LTESDTILK 584
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
+L K + L+P H K+Q K P T S K +KQ+
Sbjct: 585 NLHDKSS--LKP------HEIIEAKSQL------------KKLAPETVDLSQNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G++GT++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLV 647
>gi|345861074|ref|ZP_08813351.1| mutS2 family protein [Desulfosporosinus sp. OT]
gi|344325837|gb|EGW37338.1| mutS2 family protein [Desulfosporosinus sp. OT]
Length = 787
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 269/582 (46%), Gaps = 110/582 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ S+SG IEP+ V L +EL++ + +L L+ +++ +D +
Sbjct: 207 AFPGIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVMRILQMLSSQIEARVDAVA 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
++ + +LD+V A+A S++ +P + Q MK L
Sbjct: 267 ELHEALAKLDLVVAKAQLSVAMNAGAPELVKGQQMK----------------------LV 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+A HPL+L +V L
Sbjct: 305 QARHPLILG---------------------------------------------KVVPLS 319
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L + D + +TGPNTGGKT+ LK VGL M +SGLHI + +++ F
Sbjct: 320 LELGIDFDTLV--------VTGPNTGGKTVALKVVGLMAAMTQSGLHIPAENDSRMGVFT 371
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFSGH+K I II +S +SLVLLDE+GAGT+P EG AL M +
Sbjct: 372 QIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSDERSLVLLDEVGAGTDPTEGAALAMGI 431
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L E G T++TTH+G LKT Y +NA +EFD L+PTY++L G+PG+S+A
Sbjct: 432 LAELHERGC-RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIPGKSNAF 490
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL V++ A N + E E +E++ E + L K
Sbjct: 491 TIAGRLGLSEQVLEKA-----------NTFVTEREMQVADLIENLGETHREI----ELEK 535
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHKRAQQ 693
++T R+ +E + K + + + S+ A +L A +A +++ +
Sbjct: 536 QKVKTGRQAVERQSKALEEKSILLDEEYELLLSMAKDEASELVRQARREADAIIEELKAA 595
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
L+ Q K + H +++ + KV+ P S V IK
Sbjct: 596 LKKENKQQQDIEKARQGFHRISARLDKGR--KVQRP--GSGLVADQIK------------ 639
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+G V ++ +KG VIK+ + E++VQ G MK ++ ++
Sbjct: 640 LGQTVQMTKLRQKGQVIKLPNANGEVLVQAGIMKVMVPLVEL 681
>gi|394991851|ref|ZP_10384649.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
gi|393807396|gb|EJD68717.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
Length = 785
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 211/422 (50%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P + + I L
Sbjct: 268 QDVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|335032478|ref|ZP_08525868.1| MutS2 family protein [Streptococcus anginosus SK52 = DSM 20563]
gi|333766614|gb|EGL43904.1| MutS2 family protein [Streptococcus anginosus SK52 = DSM 20563]
Length = 776
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 216/386 (55%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L +AHP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVAHPLIENAVANDLYFAADLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++V FD +FADIGDEQS+ QSLSTFS H+ I I+ QS SLVLLDE+GAGT+P
Sbjct: 357 DEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQSDENSLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK + +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKVYGIETEGVQNASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL VV++A++L S ++N VI ER + Q LE +R
Sbjct: 476 QGVPGRSNAFEIARRLGLSVRVVKDAQELTDTDS-DVNRVI---ERLEEQTLE----SRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R L+ ++ R+ + + A + AQ++ A
Sbjct: 528 RLDNIREVEQENLKFNRA-LKKLYNEFNREKETELNKARL-------EAQEIIDVALTES 579
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
+ K +LH K ++ + Q + P T S K +KQ+
Sbjct: 580 DTILK-----------NLHAKSSLKPHEIIEAKGQLKKL----APETVDLSKNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G++GT++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLV 647
>gi|227529705|ref|ZP_03959754.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350371|gb|EEJ40662.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
Length = 784
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 228/420 (54%), Gaps = 38/420 (9%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
LSP + QV + HP V DI I + + +VITGPNTGGKTI LKT GL MM
Sbjct: 288 LSP-DNQVIIRQARHPLIDPQKVVANDIKIGDEYQSIVITGPNTGGKTITLKTFGLIQMM 346
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
++GL I + E + + FD+++ADIGDEQSL Q+LSTFSGH++ + +I+ + TS+SLVLL
Sbjct: 347 GQAGLFIPAQEGSTIAVFDNIYADIGDEQSLEQNLSTFSGHMENVKSILERITSRSLVLL 406
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL MS+L+ A GS + I TTH+ ELK Y NA MEFD+
Sbjct: 407 DELGAGTDPKEGAALAMSILDYIASKGSTVVI-TTHYPELKVYGYDRPGTINASMEFDQE 465
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
LKPTY +L G+PGRS+ I IA+RLG+ V+ ++ L S ++N++I E+ +
Sbjct: 466 TLKPTYHLLLGIPGRSNGIEIAQRLGINQTVITESKSLVSEDSQDLNQMIGELVEQRKAA 525
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
E L+ +R +L L+ QR + K + A S+ K A
Sbjct: 526 REEKERLEKLLVANREKQADLTNK----LDRFNEQRDSLLAKARNEANHEVSMAKKKAD- 580
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
R + H R QL S + ++ ++ Q L + + E P ++
Sbjct: 581 --------RIIHHLR--QLEISQAGNVKENELIDAQGALNALHR-------EDPRLKRNT 623
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V++ R K +VGD V V S+G++G ++ + SK + VQ+G ++ + D+
Sbjct: 624 VLR------RAKEKHDLHVGDAVLVKSYGQQGELLS-KRSKHKWEVQIGILRMEIDENDL 676
>gi|295397442|ref|ZP_06807529.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
gi|294974343|gb|EFG50083.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
Length = 793
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 239/411 (58%), Gaps = 37/411 (9%)
Query: 394 ELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSE 446
E HP V DI + + ++VITGPNTGGKTI LKTVGL +MA+SGL+I +
Sbjct: 306 EARHPLLDRKSVVANDIHFSHEYNMIVITGPNTGGKTITLKTVGLLQLMAQSGLYITAKA 365
Query: 447 YAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLE 506
++V F+ +FADIGDEQS+ QSLSTFSGH+ I I+ + SLVL+DE+G+GT+P E
Sbjct: 366 DSRVEIFNEIFADIGDEQSIEQSLSTFSGHMTNIIRIVEAADEHSLVLIDELGSGTDPQE 425
Query: 507 GTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWG 566
G A+ +++L FA + + +ATTH+ ELKT Y + NA MEF+E+ L+PTYK+L G
Sbjct: 426 GAAIAIAVLNRFAFLNARV-MATTHYPELKTYAYEHPGAINASMEFNEITLEPTYKLLIG 484
Query: 567 VPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL 626
VPGRS+A +I++RLGLP +V+ AR S +NE+++++E + ++ + EA L
Sbjct: 485 VPGRSNAFDISQRLGLPVEMVEEARSYIQEDSQNLNEMLLDLEAQRHEYEDLSAEAAKDL 544
Query: 627 MLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP-SASQARS 685
+ NL +L + + ++ Q + + K A QL + ++A +
Sbjct: 545 ADAENLLNDLKKAQARL--EADKQTY-------------MNRARKEANQLVEDTKTKADA 589
Query: 686 LVHK-RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
++ + R Q+ ++ ++ Q L++ Q+ ++K + +++ K++
Sbjct: 590 ILAEIREWQINHPTIGNIKEHEMIDRQSALSNLTQEEQLEK--------NKILQKAKKNK 641
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K + VGD V+V ++G++GT+ VE +++ VVQ+G +K + D+
Sbjct: 642 ERKAS--FEVGDEVNVLTYGQRGTL--VEKREKDWVVQMGMLKMEVAEKDL 688
>gi|146296717|ref|YP_001180488.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|238685558|sp|A4XK62.1|MUTS2_CALS8 RecName: Full=MutS2 protein
gi|145410293|gb|ABP67297.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 787
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 279/579 (48%), Gaps = 104/579 (17%)
Query: 219 KGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKM 276
KG++ S G+ +EP V ++++++ ++ + E +L ++ + DEIE
Sbjct: 206 KGIVHDQSATGATLFVEPFVCVEISNQIRILKSQEKEEIERILQEISSLIASYCDEIETS 265
Query: 277 LNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKA 336
+++LD+V +A ++ + +PV +++S I L KA
Sbjct: 266 FYALVELDIVFTKAIWAKEMNAS----------------KPV---INTS---GIINLKKA 303
Query: 337 YHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELA 396
HPL+ +KD
Sbjct: 304 RHPLI------------------------------------QKD---------------- 311
Query: 397 HPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSV 456
VPIDI + + VL+ITGPNTGGKT+ LKTVGL ++ +SG+ I + E +++ F +
Sbjct: 312 KVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCIFQKI 371
Query: 457 FADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLE 516
FADIGD+QS+ QSLSTFS H+K I I + ++LVLLDEIGAGT+P EG AL ++L+
Sbjct: 372 FADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILK 431
Query: 517 AFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINI 576
+E GS + IATTH+GELK D FENA EFD LKPTY++L G+PGRS+A+ I
Sbjct: 432 YLSEKGSKV-IATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVI 490
Query: 577 AERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
+ LGL +V+ AR + +++ +I EME+ + + E++ AR + ++ L
Sbjct: 491 SSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELARKLKLEAQALKAAY 550
Query: 637 LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+++ +R RK A A+ +V ++ ++ R L A+ L+
Sbjct: 551 EEEKKRF--ETERERIRK-----KAINEAKEIVERAQYEIENLFKDLRKL----AENLKE 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
K + + ++ S QQ + + + +++I+ +G
Sbjct: 600 KEVLKELEEKKREYERLIQSISQQEK----QEAESKTKKTLQNIR------------LGQ 643
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+V SF G V + SK + VQ+G MK + +DI
Sbjct: 644 KVYVRSFDAVGFVESLPDSKGNLTVQIGIMKLNVNISDI 682
>gi|260584040|ref|ZP_05851788.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
gi|260158666|gb|EEW93734.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
Length = 785
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 231/400 (57%), Gaps = 38/400 (9%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + ++ + +VITGPNTGGKTI LKT+G+ +MA+ GL+I + ++V F +FADIG
Sbjct: 320 DIILGQEYQSIVITGPNTGGKTILLKTIGIIQLMAQMGLYIPALPDSRVGVFTQIFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+++ +SLVL+DEIG+GT+P EG +L +++L+
Sbjct: 380 DEQSIEQNLSTFSSHMSNIVSILNKIDEKSLVLMDEIGSGTDPQEGASLAIAILDYIGTK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S + IATTH+ ELK Y+ NA MEFD L+PTY+ L GVPGRS+A +I+ RLG
Sbjct: 440 QSYV-IATTHYPELKVYGYNRVGTINASMEFDSDTLQPTYRFLLGVPGRSNAFDISARLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP +V++ ARQ S E+NE+I ++ER R + +++ + L+
Sbjct: 499 LPKVVIEQARQFISVESQELNEMISDLER-----------KRRIVDQEKSVIQQQLKESS 547
Query: 642 KILE--HCASQRFR--KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 697
++LE ++ F+ K + I A A LV +S + + L RA QL+
Sbjct: 548 QLLEALKLETENFKENKARLIEQAKEKANELVAQSQE------DAEKILSDIRAMQLKSK 601
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
+ V K ++ ++T + ++H V+K K R K + G
Sbjct: 602 ET-------VVKEHELIE---KKTALTDLKH-----EQVLKKNKVLKREKAKKSLRPGQS 646
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVT 797
V V+SFG++GT+++ + S++E VVQ+G +K + D+++
Sbjct: 647 VEVTSFGQRGTLVE-KISEQEWVVQMGIIKMKLPVEDLIS 685
>gi|257870172|ref|ZP_05649825.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
gi|257804336|gb|EEV33158.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
Length = 787
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 222/397 (55%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + +VITGPNTGGKTI LKT+GL +M +SGL IL E +++ F +FA
Sbjct: 317 VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-ARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + E RH++ + L K L +
Sbjct: 496 RLGLDTQIIEQAKQIMDGESQDLNEMIADLENRRKMTETEYLEMRHYVEEAERLQKELKQ 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
E A +A++ K A Q+ A + + + ++ S+
Sbjct: 556 AYNFFFEER-------------EAELAKA--RKKANQIVEEAKEESEKIISDIRNMQLSS 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
QS H K ++ + + + + + EH + V++ K + +K VGD V
Sbjct: 601 GQS-HV----KEHELIAARTKLSDLHQEEH--LQKNKVLQKAKAAKTLK------VGDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++GT+IK + + + VQ+G +K + +D+
Sbjct: 648 LVTSYGQRGTLIK-KMGQSQWQVQLGILKMTLPESDL 683
>gi|323353466|ref|ZP_08087999.1| DNA mismatch repair protein MutS [Streptococcus sanguinis VMC66]
gi|322121412|gb|EFX93175.1| DNA mismatch repair protein MutS [Streptococcus sanguinis VMC66]
Length = 777
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D++ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLYFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKSQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|357050429|ref|ZP_09111627.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
gi|355381082|gb|EHG28209.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
Length = 787
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 222/397 (55%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + +VITGPNTGGKTI LKT+GL +M +SGL IL E +++ F +FA
Sbjct: 317 VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQEIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAILDEL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 G-ARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + E RH++ + L K L +
Sbjct: 496 RLGLDTQIIEQAKQIMDGESQDLNEMIADLENRRKMTETEYLEMRHYVEEAERLQKELKQ 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
E A +A++ K A Q+ A + + + ++ S+
Sbjct: 556 AYNFFFEER-------------EAELAKA--RKKANQIVEEAKEESEKIISDIRNMQLSS 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
QS H K ++ + + + + + EH + V++ K + +K VGD V
Sbjct: 601 GQS-HV----KEHELIAARTKLSDLHQEEH--LQKNKVLQKAKAAKTLK------VGDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+S+G++GT+IK + + + VQ+G +K + +D+
Sbjct: 648 LVTSYGQRGTLIK-KMGQSQWQVQLGILKMTLPESDL 683
>gi|319939975|ref|ZP_08014330.1| MutS2 protein [Streptococcus anginosus 1_2_62CV]
gi|319810986|gb|EFW07305.1| MutS2 protein [Streptococcus anginosus 1_2_62CV]
Length = 776
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 218/386 (56%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L +AHP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVAHPLIENAVANDLYFAADLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++V FD +FADIGDEQS+ Q+LSTFS H+ I +I+ Q+ +LVLLDE+GAGT+P
Sbjct: 357 DEGSRVGIFDQIFADIGDEQSIEQNLSTFSSHMTNIVSILEQADENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK + +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDLWLR-QVKTMATTHYPELKAYGIETEGVQNASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL VV++A++L S ++N VI ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSDRVVKDAQELTDTDS-DVNRVI---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R L+ ++ R+ + + A + AQ++ A
Sbjct: 528 RLDNIREVEQENLKFNRA-LKKLYNEFNREKETELNKARL-------EAQEIIDVALTES 579
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
++ K +LH K ++ + Q + P T S K +KQ+
Sbjct: 580 DMILK-----------NLHAKSSLKPHEIIEAKGQLKKL----APETVDLSKNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G++GT++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLV 647
>gi|291562931|emb|CBL41747.1| MutS2 family protein [butyrate-producing bacterium SS3/4]
Length = 798
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 170/597 (28%), Positives = 283/597 (47%), Gaps = 112/597 (18%)
Query: 205 GRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ S F G++ S GS IEP++ + LN+EL++ K E +L A
Sbjct: 193 GRYCLPVRAEYKSQFAGMVHDQSATGSTLFIEPMAIIKLNNELRELELKEQKEIEMILAA 252
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L+ ++ ++ I + +LD + A+A S + + P
Sbjct: 253 LSTELVPYIEPITTDFEILTKLDFIFAKAALSRIYNCSMPKF------------------ 294
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
R+ I++ HPL
Sbjct: 295 ----NRKGYIHIKDGRHPL----------------------------------------- 309
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
L P ++ VPI+I++ + +L++TGPNTGGKT+ LKTVGL +M +SGL
Sbjct: 310 -LDPKKV----------VPINIWMGKDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLQ 358
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + + +++ FD VFADIGDEQS+ QSLSTFS H+ I I++Q+ S+SL L DE+ AG
Sbjct: 359 IPAFDGSELSVFDEVFADIGDEQSIEQSLSTFSAHMTNIVKILNQADSRSLCLFDELCAG 418
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +S+L +F + T+ATTH+ ELK S ENAC EF+ L+PTY
Sbjct: 419 TDPTEGAALAISIL-SFLHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLRPTY 477
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
K+L G+PG+S+A I+ +LGLP ++ +A+ + +++ +E+ + + E
Sbjct: 478 KLLIGIPGKSNAFAISRQLGLPDYIIDDAKTHLESNDEAFEDLLANLEQSRVTIEKEREE 537
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L KN+ + ++ E RK + + +A ++ AQ++ A
Sbjct: 538 IASYKEEISRLKKNIEQKEERLDE-------RKEKLLKNA--------NEEAQRILREAK 582
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ + +L S+ VGK + ++ +DKV+ + +K
Sbjct: 583 ETADQTIRNINKLAASSG-------VGKELEAERTKLRE-KLDKVDKSLS--------LK 626
Query: 742 QSPRVKRTELP---NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ K+T P +GD V V + KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 627 NNKGPKKTISPKKLKIGDGVKVLTMNLKGTVSTLPNAKGDLYVQMGILRSLVNIKDL 683
>gi|195977479|ref|YP_002122723.1| recombination inhibitory protein MutS2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689796|sp|B4U143.1|MUTS2_STREM RecName: Full=MutS2 protein
gi|195974184|gb|ACG61710.1| recombination inhibitory protein MutS2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 778
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 232/400 (58%), Gaps = 43/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++ADIGDEQS+ QSLSTFS H+ I I+ Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
+IA RLGL +V+ A Q A + ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATNHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K AA AR +V + L S S S +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDMA---LAESES-ILSQLHEKA 590
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
+ L+P ++ + +H L V + + + V+K + K+
Sbjct: 591 E-LKPH--------EIIEAKHRLKQ--------LVPEQSLSQNKVLK------KAKKWRA 627
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
>gi|157150407|ref|YP_001449579.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
gi|229486382|sp|A8AUW9.1|MUTS2_STRGC RecName: Full=MutS2 protein
gi|157075201|gb|ABV09884.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
Length = 777
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 218/388 (56%), Gaps = 40/388 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L++ HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IQLLQVRHPLIQNAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+ ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAGT+P
Sbjct: 357 DKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY+ +
Sbjct: 417 QEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL ++V +A++ S ++N++I ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSEVIVSHAQEQTNTDS-DVNQII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHAKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQA- 623
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIKV 772
K+ P VGD + V+S+G++GT++K+
Sbjct: 624 --KKNRAPKVGDDILVTSYGQRGTLVKL 649
>gi|354806618|ref|ZP_09040099.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
gi|354514802|gb|EHE86768.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
Length = 787
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 214/376 (56%), Gaps = 30/376 (7%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
A V DI I + +V+TGPNTGGKTI LKT+GL +MA+SGL I + E ++V F
Sbjct: 314 AKVVANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSD 373
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ Q+LSTFS H++ I I+ +SLVLLDE+GAGT+P EG AL +++L
Sbjct: 374 IFADIGDEQSIEQNLSTFSAHMENIIQILQHIDDRSLVLLDELGAGTDPQEGAALAIAIL 433
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+ G+ + +A+TH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +
Sbjct: 434 DQIGIVGADV-VASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSNAFD 492
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+ RLGLP +VQ A+QL S ++N +I ++E + RH L + +LH+
Sbjct: 493 ISTRLGLPSSIVQQAKQLMNDESQDLNNMITDLENQRKAAETEYQALRHELAEATDLHQQ 552
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L ++ E ++ + +K A ++V K+ + ++ R + + Q++
Sbjct: 553 LSTAYQQFFEDRETEMTKAKEK-------ANAIVEKAEVKADKVITKLRDMQMNQGAQIK 605
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ ++ + L Q+TT+ K + V++ R KR + G
Sbjct: 606 EN--------QLIDAKSELGQLHQETTLKK--------NKVLQ------RAKRRQTLKEG 643
Query: 756 DLVHVSSFGKKGTVIK 771
D V V+S+G++GT+++
Sbjct: 644 DDVLVTSYGQRGTLVR 659
>gi|406026859|ref|YP_006725691.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
gi|405125348|gb|AFS00109.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
Length = 788
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 293/594 (49%), Gaps = 107/594 (18%)
Query: 205 GRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR + A+ + F G++ S+SG +EP + V +N++L++ + + +L
Sbjct: 195 GRFVLPIKAEYKQRFGGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAEVRRILAE 254
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
LT ++ DE+ ++ + QLD VNA+A ++ + G P + P+++
Sbjct: 255 LTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMPKVS-PKNV------------ 301
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
I L KA HPL+ + Q D+E
Sbjct: 302 ---------INLRKARHPLI-----PRDQVVANDIE------------------------ 323
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+ + +++TGPNTGGKTI +KTVGL +M +SGL
Sbjct: 324 -----------------------LGDQYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLF 360
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I ++E +++ FD+VFADIGDEQS+ +LSTFS H+ I +I+ Q++ SLVLLDE+GAG
Sbjct: 361 ITANEDSQIGVFDNVFADIGDEQSIEANLSTFSSHMDNIISILKQTSKDSLVLLDELGAG 420
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL M++++AF + G L IATTH+ ELK Y+ NA MEFD L+PTY
Sbjct: 421 TDPKEGAALAMAIIDAFHQIGGEL-IATTHYPELKAFAYNRQGIINASMEFDVETLQPTY 479
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ L G+PG+S+A+NIA +LG+P ++ AR + + +IN +I E+ T + H+
Sbjct: 480 RFLLGIPGQSNALNIASKLGMPEAIIDQARAFTDSENQDINNMIEEL----TAQTKRAHD 535
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L + L + R L+H +F K + + LV ++ QQ
Sbjct: 536 E------ADELDQQLKESTR--LQHDLQDKFTKYESQKE------RLVEQAKQQANQVVE 581
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A+ + L +Q KV ++ L + ++++E +A S +
Sbjct: 582 EAKKKADRIIDDLHQKQAQ---VGKVAVKENELID--AKGALNQLE---SAPSLTKNKVL 633
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + K P GD V V S+G++GT+++ + + VQ+G +K ++ +D+
Sbjct: 634 RKEKAKHDFHP--GDDVLVKSYGQQGTLLRKDKN-HTWDVQIGILKMQIEESDL 684
>gi|148240433|ref|YP_001225820.1| mismatch repair ATPase [Synechococcus sp. WH 7803]
gi|147848972|emb|CAK24523.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. WH 7803]
Length = 794
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 210/386 (54%), Gaps = 43/386 (11%)
Query: 414 ITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTF 473
ITGPNTGGKT+ LK++GLA +MA++GL + + +PW V ADIGDEQSL QSLSTF
Sbjct: 339 ITGPNTGGKTVTLKSIGLAALMARAGLWVPCTGSPTLPWCAQVLADIGDEQSLQQSLSTF 398
Query: 474 SGHLKQIGNI---ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATT 530
SGH+K+IG I I + +LVLLDE+GAGT+P EGTAL +LL A+ + LT+ATT
Sbjct: 399 SGHVKRIGRILEAIRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADR-ARLTVATT 457
Query: 531 HHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNA 590
H GELK LKYS+ FENA + FD L PTY +LWG+PGRS+A+ IA RLGL V+ +A
Sbjct: 458 HFGELKALKYSDARFENASVAFDSDTLSPTYHLLWGIPGRSNALAIATRLGLETSVIDDA 517
Query: 591 RQLYG-AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCAS 649
R L A E+N VI +E + + +A L + LH+ LL+ K +H A
Sbjct: 518 RALLSPAGDGEVNTVIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAE 577
Query: 650 QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
++ + Q++ + ++ Q+ + R L+ + LR + K G+
Sbjct: 578 RQEQGRQRLETSI--------RAGQK------EVRQLIRR----LRDDRADGETARKAGQ 619
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+E + Q R P VGD + + + GK V
Sbjct: 620 R------------LRKLED--RHRPEPERRRHQGWR------PQVGDRIRLLALGKAAEV 659
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+KV ++ V+ G M+ ++ + +
Sbjct: 660 LKVSADGLQLQVRCGVMRSTVELSGV 685
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 42/293 (14%)
Query: 50 VYESLRVLEWDKLCHSVSSFARTSLGRE------------ATLT------QLWSINQTYQ 91
+ E+L +LEW +LC ++SFA T GR A+LT ++ S++
Sbjct: 4 LQETLELLEWPRLCEHLASFASTVQGRRHCKGDPLPDSLPASLTLQAQTLEMASLDGVLD 63
Query: 92 DSLR---LLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR---ASPLRPNEALAV 145
L + D + K G+ S + ++++ +A R +RR LRP +
Sbjct: 64 GGLSFQGVRDLAPTLLRCSKGGTASGEEL-LEVADTLAAARRLRRQIDEPELRPVCTTLL 122
Query: 146 VALLQFSETLQLSLRAAIKEDADLYIRFMP-LTQMLYQLMDMLIRNENNESLFLE----- 199
+ F + L+ L+ AI+E + R P L + Q ++ + + +
Sbjct: 123 EDVATFPD-LEQRLKFAIEEGGRVADRASPGLDGLRRQWQELRAKRRDRLQDVIRRWAAH 181
Query: 200 -----VSSIHGR--LCIRTGADQLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARAS 250
++ HGR L ++ GA G++ SS GS + EP + L ++L
Sbjct: 182 LQDTVIAERHGRPVLAVKAGAGG-QCPGMVHDSSASGSTVFVEPKVVIDLGNKLANVDGR 240
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ + E+ VL L+ + ++ ++ ++ +++LD+ AR Y G P +
Sbjct: 241 IREEEQRVLAELSAAVAEQVEGLQHLMQVLLKLDLALARGRYGQWLGAVPPRL 293
>gi|422933743|ref|ZP_16966518.1| DNA mismatch repair protein MutS, partial [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339891359|gb|EGQ80350.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 797
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 313 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 372
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 373 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 432
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 433 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 491
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 492 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 550
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 551 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 597
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 598 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 645
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 646 KKIKTKINFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFDEI 697
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 162 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPV 217
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 218 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 274
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 275 LRNNKDDILTIGEKVMYLDILNAKSIYA 302
>gi|194468338|ref|ZP_03074324.1| MutS2 family protein [Lactobacillus reuteri 100-23]
gi|194453191|gb|EDX42089.1| MutS2 family protein [Lactobacillus reuteri 100-23]
Length = 791
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 276/570 (48%), Gaps = 123/570 (21%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKM---QVDLDEIEKMLNGI 280
S+SG IEP + V N+ L+QA+ + + VL+ L++ + + D+ + E +L
Sbjct: 216 SASGQTLYIEPAAVVETNNRLRQAQIEERQEMQRVLIELSQMIAPYRHDIGQNEAILG-- 273
Query: 281 IQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPL 340
LD +NA+A ++ D K +L P+ SK E + L KA HPL
Sbjct: 274 -HLDFINAKARWA-------------HDTKATL---PLLSK------ENHVSLRKARHPL 310
Query: 341 LLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVP 400
+ +LRR V
Sbjct: 311 I--------------------DLRR--------------------------------VVT 318
Query: 401 IDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADI 460
DI I + ++ITGPNTGGKTI LKT+G+ +M +SGL I + E + + FD+VFADI
Sbjct: 319 NDIKIGEDCQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADI 378
Query: 461 GDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAE 520
GDEQSL Q+LSTFSGH+ + I+ Q TS+SLVLLDE+GAGT+P EG AL M++L+
Sbjct: 379 GDEQSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGS 438
Query: 521 SGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERL 580
G+++ I TTH+ ELK Y NA MEFD+ LKPTYK+L G+PGRS+ + IA+RL
Sbjct: 439 KGTMVVI-TTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRL 497
Query: 581 GLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTR 640
G+ V+ AR S ++N +I ++ + + E + + + ++L
Sbjct: 498 GINPQVIDEARTFVSDDSQDLNNMIGDLVEQRKKAREESERLAKLVAKNEKVQRDL---- 553
Query: 641 RKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQ 700
+ L QR + ++ ARS K+ Q+ + +A ++H Q
Sbjct: 554 DEKLTRFNEQRDKLYEQ-------ARS---KANHQVSMAKKKADRIIHHLRQ-------- 595
Query: 701 SLHCTKVG--KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
L + G K ++ + Q + + ++P ++SV++ KQ + + GD V
Sbjct: 596 -LEVQQGGNVKENELIDAQGQLNALHR-DNPRLQNNSVLQRAKQKHDLHK------GDAV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V S+G+ G E++ + GN KW
Sbjct: 648 LVKSYGQYG----------ELLSKRGNHKW 667
>gi|332798676|ref|YP_004460175.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696411|gb|AEE90868.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
Length = 787
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/378 (37%), Positives = 211/378 (55%), Gaps = 48/378 (12%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VP+D+++ + +L+ITGPNTGGKT+ LKTVGL ++MA+SGLH+ + E +V
Sbjct: 307 HPLLKGEVVPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFILMAQSGLHLPAQEGTEV 366
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
F+ VFADIGDEQS+ QSLSTFS H+K I I+ +T SL++LDE+GAGT+P EG AL
Sbjct: 367 SIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLIILDELGAGTDPTEGAAL 426
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M++L E GS + +ATTH+ ELKT +S + ENA MEFD L PTY++ G+PG+
Sbjct: 427 AMAILNYLYEKGSRV-LATTHYSELKTFAFSKEGVENASMEFDIQTLSPTYRLTIGIPGK 485
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMER------------FKTQFL 616
S+A IA+RLGL VV + L S ++ +++ IE+++ KT++L
Sbjct: 486 SNAFEIAKRLGLKQEVVDLGKSLMAEESLKLEDLLTHIELQKNKAEEEREELRALKTEYL 545
Query: 617 EHV---HEARHFL------------MLSRNLHKNLLRTRRKILEHCA-SQRFRKVQKISD 660
+ + E + L M +R L N+ R +I+E ++ ++ +
Sbjct: 546 KKIDRLEEEQQKLRIQQEKIVEKAKMKARLLLDNIEREAAQIIESLKDAETENQIHIRNK 605
Query: 661 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ--------H 712
A ARS + K+ ++L S + +L+ A++ + L G NQ
Sbjct: 606 AVEQARSWLRKTDEKLQDSKN---ALIINAAKKYKKPLKPGLKVKIAGLNQEGYILSLDE 662
Query: 713 VLTSNFQQTTVDKVEHPA 730
L S Q + KV PA
Sbjct: 663 ALKSAQVQVGIMKVNVPA 680
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 46/291 (15%)
Query: 56 VLEWDKLC-----HSVSSFARTSLGR--------------EATLTQLWSINQTYQDSLRL 96
+LE+DK+ ++VSS A+ + R T L +N + SLR
Sbjct: 8 ILEYDKIKSILMEYAVSSLAKEKIARMRPSSDEDLVKMLQRETSEGLALLNSGIKISLRG 67
Query: 97 LDETNAAIEMQKHGSCSLDLTGVDLS-------LVKSAIREVRRASPLRPNEALAVVALL 149
+ + ++ + K GS +D++ L+KSA E + A + NE +V L
Sbjct: 68 IKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSAWNEKKPADSVIINE---IVNGL 124
Query: 150 QFSETLQLSLRAAIKEDADLYIRFMP-LTQMLYQLMDML--IRNENNE---SLFLE---- 199
++L+ + AI D ++ P L+ + Q ++ IRN+ NE S + +
Sbjct: 125 HIFQSLEEKIEKAIVSDEEIADNASPKLSSIRRQKKNLAQSIRNKLNEIISSPYYQKALQ 184
Query: 200 ---VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTK 253
V+ R + + + S +G++ S+SG IEP++ + +N+EL+Q K
Sbjct: 185 DPIVTVRQDRYVVPVKQEFRGSIQGVIHDQSASGATLYIEPMAVMQMNNELRQLEIEEKK 244
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
E +L ++K+Q + D I L G+ LD + A+A YSL GT P IF
Sbjct: 245 EIERILWDFSKKVQENYDFIHDTLYGLAHLDFIMAKAGYSLDIKGTEP-IF 294
>gi|392960889|ref|ZP_10326353.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|421054879|ref|ZP_15517843.1| MutS2 family protein [Pelosinus fermentans B4]
gi|421058104|ref|ZP_15520836.1| MutS2 protein [Pelosinus fermentans B3]
gi|421063592|ref|ZP_15525555.1| MutS2 protein [Pelosinus fermentans A12]
gi|421071758|ref|ZP_15532871.1| MutS2 protein [Pelosinus fermentans A11]
gi|392439982|gb|EIW17670.1| MutS2 family protein [Pelosinus fermentans B4]
gi|392446346|gb|EIW23631.1| MutS2 protein [Pelosinus fermentans A11]
gi|392454456|gb|EIW31288.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|392461473|gb|EIW37661.1| MutS2 protein [Pelosinus fermentans B3]
gi|392462624|gb|EIW38682.1| MutS2 protein [Pelosinus fermentans A12]
Length = 787
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 222/396 (56%), Gaps = 30/396 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDIFI + L+ITGPNTGGKT+ LKT+GL +M ++GL+I +++ F+++FA
Sbjct: 315 VPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALMTQAGLYIPVQNGSEIAVFNNIFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ + I++Q TS+ LVL+DEIGAGT+P EG AL MS+LE
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNLVRILNQITSEDLVLIDEIGAGTDPDEGAALAMSILEHL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ TIATTH+ ELKT YS ENA +EFD L+PTY++L GVPG S+A I++
Sbjct: 435 LNIGA-KTIATTHYSELKTFAYSRQGIENASVEFDIQTLRPTYRLLIGVPGSSNAFAISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ A Q AE V+ +E K + + +HE + + LH +LR
Sbjct: 494 RLGLSDRIIDQASQFIDKDHAEFETVLNALEEQKIAY-DKLHE--EVIQQEQTLH--ILR 548
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E+ + + K+ ++ A A SL+ K+ ++ ++ ++ ++ S+
Sbjct: 549 EKLATEENVLAAKKHKI--LAKAQEEAESLLRKTRRETEEIITELKAQFTAKSN----SS 602
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
++ K K N + D P +S + +P G V
Sbjct: 603 TRQGIFDKSRKRLRDNLENLNENEEDDNSLPIVTASVL------TP----------GMQV 646
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
++++ +KGTV+ + E++VQ+G MK + TD
Sbjct: 647 YITTLKQKGTVVSI--GINEVIVQLGIMKMNVAITD 680
>gi|238926801|ref|ZP_04658561.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
gi|238885333|gb|EEQ48971.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
Length = 785
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 209/783 (26%), Positives = 361/783 (46%), Gaps = 151/783 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGRE--------ATLTQLWSINQTYQDSLRL------- 96
ES +VLE++K+ ++S+A T+ G+E + + ++ ++++R+
Sbjct: 4 ESFKVLEYEKIKARLASYAATAYGKERCSNIMPSSDYDHIAQLHMETEEAVRVAQIQPPP 63
Query: 97 LDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQ 156
D + E+ K + L +L LVKS I +R + + L + + ++
Sbjct: 64 FDGIHHLREILKKAGRGILLELDELRLVKSTIGGMRDVKYFFRDLSADAELLKELARRIE 123
Query: 157 L------SLRAAIKEDADLYIRFMPLTQMLY--------QLMDML---IRNENNESLFLE 199
+ +L+AAI E + P+ + ++ D L + + + +F E
Sbjct: 124 ILGMLERNLKAAIDEYGNFRDDASPVLHRITNELRTAQSRVKDRLSSVLHDAAYQKMFQE 183
Query: 200 --VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKA 254
V+ R I + S F G++ S+SG IEPL+ V LN+ ++Q + +
Sbjct: 184 AIVTVRDERYVIPVKQEYRSQFPGVIHDQSASGATLFIEPLAIVELNNTVRQMGIAREQE 243
Query: 255 EEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
++ LT ++ D + + LD++ ARA+ L ++M+
Sbjct: 244 ILRIMQRLTGEIARSADILSANCTILSDLDLIFARAS-------------LAREMR---A 287
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+ P+ + R+ +YL +A HPL
Sbjct: 288 YPPILN------RDGYVYLRRARHPL---------------------------------- 307
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
L L VPIDI + + L+ITGPNTGGKT+ +KT+G+ +
Sbjct: 308 ------------------LPLDKVVPIDIALGKTFSTLLITGPNTGGKTVSMKTLGILAL 349
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M++SG + + +++P + +++ADIGDEQS+ QSLSTFS H + I II ++TS LVL
Sbjct: 350 MSQSGCFLPAESGSEIPVYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATSGDLVL 409
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
LDE+GAGT+P EG AL S++E F + + T+ATTH+ +LKT Y+ ENA +EFD
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFLMN-RIATVATTHYADLKTYAYTQQGVENASVEFDL 468
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQ 614
L+PTY++L G+PG S+A +I+ +LGL +V A + A V+ ++E KT
Sbjct: 469 KTLRPTYRLLIGIPGASNAFSISRQLGLSEEIVARAEEYVSEDHAHFETVVHDLECAKTI 528
Query: 615 FLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARS---LVHK 671
+ E KN L +++ A +R R ++ AA +S L HK
Sbjct: 529 YEE----------------KNQLLYKKETDIGRAEERLR-----AERAAFEQSKKELFHK 567
Query: 672 SAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV-GKNQHVLTSNFQQTTVDKVEHPA 730
+ ++ +AR + + + L+ H K K H S +T + +
Sbjct: 568 AREEANNIVREARRIAEETIKSLKEQFDD--HGIKERQKAIHEARSRLNETYIHDMPQK- 624
Query: 731 TASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
+ S+ KDI +GD V++ + ++GTV+ ++ EE+ VQVG ++ I+
Sbjct: 625 --NPSIGKDIHPGD-------VQIGDTVYIRTLAQEGTVLSLQ--GEELTVQVGGLRTIV 673
Query: 791 KFT 793
K +
Sbjct: 674 KMS 676
>gi|414563279|ref|YP_006042240.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338846344|gb|AEJ24556.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 778
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 230/401 (57%), Gaps = 45/401 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K AA AR +V + L S S S +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDMA---LAESES-ILSQLHEKA 590
Query: 692 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
+ L+P ++ H K + L+ N V+K + K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN-----------------KVLK------KAKKWR 626
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKMTLK 666
>gi|336428866|ref|ZP_08608841.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336004409|gb|EGN34474.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 792
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 290/607 (47%), Gaps = 121/607 (19%)
Query: 200 VSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEE 256
++S +GR CI A+ S G++ S GS +EP + V LN+++++ + E
Sbjct: 188 ITSRNGRYCIPVKAEYRSQVPGMIHDQSSTGSTLFVEPAAVVNLNNQMRELEIKEQEEIE 247
Query: 257 DVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHE 316
VL +L+ ++ ++I + + LD + A+A+ +L T E
Sbjct: 248 KVLASLSAQVAEHTEDIAENQRILTLLDFIFAKASLALEQNAT----------------E 291
Query: 317 PVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARK 376
P+ ++ + + + A HPLL K+KT
Sbjct: 292 PIFNE------DHILNIRGARHPLL---DKKKT--------------------------- 315
Query: 377 GEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMA 436
VPIDI + R +L+ITGPNTGGKT+ LKT GL +M
Sbjct: 316 ----------------------VPIDIRLGRDYDLLIITGPNTGGKTVSLKTTGLFCLMG 353
Query: 437 KSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLD 496
++GLHI + + +++ F V+ADIGDEQS+ QSLSTFS H+ I +I+ + + SL L D
Sbjct: 354 QAGLHIPALDRSELSIFREVYADIGDEQSIEQSLSTFSSHMTSIVSILKNADADSLCLFD 413
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
E+GAGT+P EG AL +++L + G + T+ATTH+ ELK S F ENAC EFD
Sbjct: 414 ELGAGTDPTEGAALAIAILNFLHDRG-IRTMATTHYSELKVYALSTSFVENACCEFDVES 472
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF- 615
L+PTY++L G+PG+S+A I+ RLGL ++ +AR A + +++ ++E+ +
Sbjct: 473 LRPTYRLLIGIPGKSNAFAISSRLGLSDDIINSARTQISAEAKSFEDLLTDLEQSRVTIE 532
Query: 616 ---LEHVHEARHFLMLSRNL---HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLV 669
LE R L + L + + + + +IL A+++ R++ + DA A +
Sbjct: 533 KEQLEIASYKREVEALKKQLEAKQEKIDQAKERILRE-ANEQAREI--LQDAKNTADETI 589
Query: 670 HKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHP 729
++ Q+ P AS + K + LR S KN+ + N Q P
Sbjct: 590 -RAFQKAGPGASMKD--LEKARENLRGKISD--------KNEKLAVKNQQ---------P 629
Query: 730 ATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWI 789
A + VK ++L +G+ V + S G KGTV + +K + VQ G ++
Sbjct: 630 AQSG------------VKPSQL-KLGESVRIVSMGLKGTVSTMPDNKGNLFVQCGIIRTQ 676
Query: 790 MKFTDIV 796
D+V
Sbjct: 677 TNIRDLV 683
>gi|384266410|ref|YP_005422117.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899448|ref|YP_006329744.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
gi|380499763|emb|CCG50801.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173558|gb|AFJ63019.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
Length = 785
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 210/422 (49%), Gaps = 77/422 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + + LD + A+A Y+ + T P + + I L
Sbjct: 268 QNVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLENSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NL 636
L
Sbjct: 553 EL 554
>gi|403744515|ref|ZP_10953741.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
gi|403122049|gb|EJY56297.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
Length = 780
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 214/403 (53%), Gaps = 42/403 (10%)
Query: 397 HP--VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
HP VPID+ + R+L+ITGPNTGGKT+ LKTVGL +MA SGL + + +++ +
Sbjct: 312 HPAGVPIDVELGADFRLLIITGPNTGGKTVTLKTVGLLTLMAMSGLFLPTRRESEIGFCR 371
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VF DIGDEQS+ QSLSTFS H+K I ++ Q +SLVLLDE+GAGT+P EG+AL +++
Sbjct: 372 DVFVDIGDEQSIEQSLSTFSSHMKNIIQMLQQVDEKSLVLLDELGAGTDPAEGSALAIAI 431
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + G+ + +ATTH+ ELK + N NA MEFD L+PTY++L GVPGRS+A+
Sbjct: 432 LDRLTQVGARV-MATTHYAELKGYAFHNSHAMNASMEFDLASLRPTYRLLMGVPGRSNAL 490
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA+RLGLP ++ AR+ + E+I ++E EA R+
Sbjct: 491 AIAQRLGLPDDILAAAREHVAETDVHVEELIGKLEAAN-------REAERL----RDEAA 539
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
R +E ++ ++++D AR+ A + A Q + + +Q+
Sbjct: 540 RAWEDARAQMEQLDARETALDKELADVRERARN----EAASIVEKAQQEAERIIRELRQM 595
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP-- 752
R H + + + K +V + K SPR P
Sbjct: 596 R----------------HTTVKDHELVELRK------GLEGLVPERKASPRRSGKVSPKL 633
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+VG V V S G+KG V++V P + +VQ+G M+ + D+
Sbjct: 634 SVGQRVRVISLGQKGDVVEVAPDSKSALVQLGAMRMKVVVNDL 676
>gi|225869204|ref|YP_002745152.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus]
gi|259511161|sp|C0MEM8.1|MUTS2_STRS7 RecName: Full=MutS2 protein
gi|225702480|emb|CAX00391.1| putative DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus]
Length = 778
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 230/401 (57%), Gaps = 45/401 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 692 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
+ L+P ++ H K + L+ N K +KQ+ K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN--------------------KVLKQA---KKWR 626
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
>gi|414153028|ref|ZP_11409355.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455410|emb|CCO07257.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 783
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 267/574 (46%), Gaps = 110/574 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EPL+ V N+E+++ A+ + + +L L++ + E+ L + +L
Sbjct: 213 SASGATLFVEPLAVVDANNEVRRLMAAEKQEIQRILAELSQGVSAVAQELSLALQALAEL 272
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + ARA YSL SP I +E IY+ + HPLL
Sbjct: 273 DYIMARARYSLKLKAWSPQI---------------------TEGSPYIYIKQGRHPLL-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
G+A VP I
Sbjct: 310 --------------------------PGDA-------------------------VPATI 318
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ + + LVITGPNTGGKT+ LKTVGL +M ++GLHI + + + +FADIGDE
Sbjct: 319 ELGKNFKTLVITGPNTGGKTVTLKTVGLFALMTQAGLHIPAEAGTTMGVYKKIFADIGDE 378
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+ Q SLVLLDE+GAGT+P EG AL ++LE G+
Sbjct: 379 QSIEQSLSTFSSHMTNIVHILQQVDEDSLVLLDELGAGTDPTEGAALARAILEELHNRGA 438
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
TIATTH+ ELK Y+ ENA +EFD L+PTY++L G PGRS+A I+ RLGL
Sbjct: 439 -CTIATTHYSELKNYAYTTPGVENASVEFDAETLRPTYRLLIGRPGRSNAFEISARLGLR 497
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
+V ARQ ++ E+I ++E KTQ A + R + L R++
Sbjct: 498 PDIVNRARQFLTTEQVQVAELINKLE--KTQQAAEKDRAAAAAL--RRESEQLQEEYRRL 553
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
E R +K + ++ A A S V ++ + + + R+ + + + R A Q
Sbjct: 554 AEEL---RTKKEEILARAHEEAGSFVRRARLEAEEAVKELRARLAEENTKNREEAIQQAR 610
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVE--HPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
S QQ T +KV P A++ V D +VK G+ V +
Sbjct: 611 ------------SKLQQVT-NKVTTGAPQPAAAGEVPD-----QVK------PGEEVFLP 646
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ +K V+ V S E + VQ G +K ++ ++
Sbjct: 647 KYNQKAYVLSV--SGENVQVQAGILKMVVPVQEL 678
>gi|401682045|ref|ZP_10813940.1| MutS2 family protein [Streptococcus sp. AS14]
gi|400185351|gb|EJO19581.1| MutS2 family protein [Streptococcus sp. AS14]
Length = 777
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 220/390 (56%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG+AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGSALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRSLKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + +T + K+ P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEA---KTQLKKL-APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
QS K+ P VGD + V+S+G++GT++K
Sbjct: 622 QS---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|332686481|ref|YP_004456255.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
gi|332370490|dbj|BAK21446.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
Length = 789
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 216/386 (55%), Gaps = 28/386 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + +VITGPNTGGKTI LKT+GL +M +SGL I ++ +++ F +FADIG
Sbjct: 320 DITIGEDYQTIVITGPNTGGKTITLKTIGLLQLMGQSGLPIPVNDNSQIGIFKEIFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +II + SLVLLDE+GAGT+P EG AL +S+L+A +
Sbjct: 380 DEQSIEQNLSTFSSHMTNIVSIIEKVDKNSLVLLDELGAGTDPQEGAALAISILDAL-NT 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
TIATTH+ ELK Y+ NA MEF+ L PTY++L GVPGRS+A +I++RLG
Sbjct: 439 KQAYTIATTHYPELKIYGYNRSGTINASMEFNIDTLSPTYRLLIGVPGRSNAFDISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L ++ ARQ+ S E+NE+I ++E + EAR+FL + L L +
Sbjct: 499 LNTKIIDEARQIMNGDSQELNEMIADLENRRKMAETEYKEARYFLNEAEQLQTEL----K 554
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
++ + +R +++K A A S+V K+ ++ + R + QQ Q
Sbjct: 555 EVYRYLHQERENEMEK---ANKQANSIVKKAQEEADAIIKEIRKMQLNTNQQTTIKEHQL 611
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ + SN QQT EH ++ K + K + N GD V V
Sbjct: 612 IDAK-------IKLSNLQQTE----EH--------LEKNKVLKKAKAKKQLNAGDEVIVE 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMK 787
++G+ GT++K + KE VQ+G +K
Sbjct: 653 TYGQHGTLLK-KLDKEHWQVQLGILK 677
>gi|237743809|ref|ZP_04574290.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
gi|229432840|gb|EEO43052.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
Length = 778
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFDEI 678
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEQSLSNAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILIIGEKVMYLDILNAKSIYA 283
>gi|408356333|ref|YP_006844864.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
gi|407727104|dbj|BAM47102.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
Length = 783
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 216/397 (54%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI + +VITGPNTGGKT+ LK VGLA +MA+SGL + + + ++ FD VFA
Sbjct: 316 VANDILLGEDYHAIVITGPNTGGKTVTLKLVGLATLMAQSGLQVPALDGCRLAVFDEVFA 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ QI I+ Q +SLVL DE+GAGT+P EG AL M++L+ +
Sbjct: 376 DIGDEQSIEQSLSTFSSHMTQIVKILKQVNHKSLVLFDELGAGTDPQEGAALAMAILD-Y 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ IATTH+ ELK Y+ D NA +EFD L+PTY++L GVPGRS+A I+
Sbjct: 435 VVNKKARVIATTHYPELKAYGYNRDGVINASVEFDVKSLQPTYRLLIGVPGRSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ +QL G + + +I ++ + Q + +A L + L L
Sbjct: 495 RLGLDDQIIEAGKQLIGTDTKSVEHMIESLDTARRQAEQDYDDAERTLQEAEALRDQL-- 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
RK LE +R R QK ++AQ+ A Q + + + +Q++ A
Sbjct: 553 --RKELEKFDQERERLYQK-----------AEETAQKAIEKARQEATEIVESIRQMQHGA 599
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
S H + + L T + E+ A +S+ KQ+ VGD V
Sbjct: 600 SLKEHEWIEARKR--LDQAAPNLTDKRQENKALHTSA-----KQTF--------EVGDEV 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+V + + GT+I + + ++I VQ+G MK +K D+
Sbjct: 645 NVLTLNQNGTIIAIN-ADDDIQVQIGVMKLKVKKRDL 680
>gi|402310174|ref|ZP_10829142.1| MutS2 family protein [Eubacterium sp. AS15]
gi|400369416|gb|EJP22416.1| MutS2 family protein [Eubacterium sp. AS15]
Length = 785
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 216/407 (53%), Gaps = 57/407 (14%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I I + LVITGPNTGGKT+ LKT+GL +M + GLHI + F+++FADIGD
Sbjct: 318 IEIGKSYTTLVITGPNTGGKTVTLKTLGLLCIMLQCGLHIPCDIGSSGYIFNNIFADIGD 377
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS++QSLSTFS H+ I I+++ SLVL DE+GAGT+P+EG L +S+L+ E
Sbjct: 378 EQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFDELGAGTDPVEGAGLAISILDTLKEK- 436
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+LT ATTH+ ELK + D NA +EFD L PTY+++ G+PG+S+A I+++LGL
Sbjct: 437 DILTAATTHYSELKNYALTVDKVTNASVEFDVNTLSPTYRLIIGIPGKSNAFEISQKLGL 496
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQF------LEHVHEARHFLMLS-RNLHKN 635
++Q AR S ++ +VI ++++ K ++ LE E F+ L N +
Sbjct: 497 SKDIIQRARDTIHTESIKVEDVITKLDKIKNEYEEKKQRLEKELEDAEFIRLKLENRERR 556
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ KILE ++ ARSLV + A ++K +L+
Sbjct: 557 AQQNSEKILEEAKNK--------------ARSLVEE--------AKNEADEINKVLNKLK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD---IKQSPRVKRTELP 752
S S+++ +DK + + KD K+ VK E P
Sbjct: 595 KS------------------SDYK--NIDKKMNEIKGRINTFKDKYAKKKEELVKSNEKP 634
Query: 753 ----NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VGD+V+V+SF + V+ V+ K E+VVQ+G +K +K +I
Sbjct: 635 IENVGVGDIVYVNSFAQNAKVLSVDDKKNEVVVQLGAIKMTLKKENI 681
>gi|266619519|ref|ZP_06112454.1| DNA mismatch repair protein MutS [Clostridium hathewayi DSM 13479]
gi|288868929|gb|EFD01228.1| DNA mismatch repair protein MutS [Clostridium hathewayi DSM 13479]
Length = 799
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 208/794 (26%), Positives = 352/794 (44%), Gaps = 164/794 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAI-EMQKHG 110
++L+ LE+DK+ ++ +A G+E + SI+ Y + + ET A+ +++ G
Sbjct: 4 KALKTLEYDKIIVQLAEYASCESGKELCRRLVPSID--YDEIVTAQRETTDAVTRVRQKG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRA---AIKEDA 167
G+ VK ++R L +L +V LL S L + RA ED+
Sbjct: 62 -------GISFGGVKDIRASLKR---LEVGSSLGIVELLSVSSLLTTAARAKSYGRHEDS 111
Query: 168 DL--------YIRFMPLTQMLYQLMDMLIRNE---------------------------- 191
+L + PLT + ++ ++ E
Sbjct: 112 ELPEDSLEQFFSVLEPLTPVNTEIRRCILSEEEVSDDASPGLHHVRRSMKNIHDKIHTQL 171
Query: 192 ----NNESLFLEVSSI---HGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLN 241
N+ +L+ + I GR C+ ++ S G++ S GS IEP++ + LN
Sbjct: 172 NSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSNVPGMVHDQSSTGSTLFIEPMAILKLN 231
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
++L+ K E VL L+ ++ DE+ + +LD + A+A S + + P
Sbjct: 232 NDLRALEIQEQKEIEMVLADLSNQLVPYQDELLTDFEVLTRLDFIFAKAALSRHYQASEP 291
Query: 302 NIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANT 361
++ I++ HPLL
Sbjct: 292 RF----------------------NKKGIIHIKDGRHPLL-------------------- 309
Query: 362 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 421
PS++ VPI + + R +LV+TGPNTGG
Sbjct: 310 ----------------------DPSKV----------VPITVHLGRDFDLLVVTGPNTGG 337
Query: 422 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 481
KT+ LKTVGL ++ ++GLHI + + +++ FD VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 338 KTVSLKTVGLFTLIGQAGLHIPAFDGSELSVFDEVFADIGDEQSIEQSLSTFSAHMTNIV 397
Query: 482 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 541
I+ Q+ S+SL L DE+GAGT+P EG AL +++L +F + T+ATTH+ ELK +
Sbjct: 398 QILGQADSRSLCLFDELGAGTDPTEGAALAIAIL-SFLHNMKCRTMATTHYSELKVFALT 456
Query: 542 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 601
ENAC EF+ L+PTY++L GVPG+S+A I+ +LGLP ++++A+ A
Sbjct: 457 TPGVENACCEFNVETLQPTYRLLIGVPGKSNAFAISSKLGLPDYIIEDAKTHLEAKDETF 516
Query: 602 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 661
+++ +E+ + + + + M L L + ++ E R+ + I DA
Sbjct: 517 EDLLTHLEQNRVTIEKERIQIESYKMEVEKLKARLTQKEERLDE-------RRDKMIRDA 569
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
A+ ++ A+ + +Q+ AS+S VGK + +
Sbjct: 570 KEEAQRILR-----------DAKDTADQTIRQINKLASES----GVGKELEAERARIRGK 614
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
K + + + K+ KQS K+ +L GD V V S GTV + SK ++ V
Sbjct: 615 L--KEVDSSLSLKNQTKEPKQSIDPKKLKL---GDGVRVLSMNLNGTVSSLPNSKGDLYV 669
Query: 782 QVGNMKWIMKFTDI 795
Q+G ++ ++ +D+
Sbjct: 670 QMGILRSLVNLSDL 683
>gi|164687641|ref|ZP_02211669.1| hypothetical protein CLOBAR_01283 [Clostridium bartlettii DSM
16795]
gi|164603415|gb|EDQ96880.1| MutS2 family protein [Clostridium bartlettii DSM 16795]
Length = 792
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 219/399 (54%), Gaps = 37/399 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +++ + LVITGPNTGGKT+ +KTVGL +M +SGLHI + + +D+VFA
Sbjct: 318 VPNTVYLGKDFDTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADFGTSMCVYDNVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+++ TS SLV+ DE+GAGT+P+EG AL +++LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMTNTVSILNEVTSDSLVIFDELGAGTDPVEGAALAIAILEDV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+G+ IATTH+ ELK + + ENA +EFD L PTY++L GVPG+S+A I++
Sbjct: 438 NMAGA-KCIATTHYSELKNYALTKNGVENAAVEFDVDTLSPTYRLLIGVPGKSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGL V+ A++ + E+ +V+ +E+ + + E EA L + + ++
Sbjct: 497 KLGLSEYVINRAKEFINTDNIELEDVLQNVEKNRLKAEEDRLEAEK---LKKEIE-DIKA 552
Query: 639 TRRKILEHCASQRFRKVQKI-SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ---- 693
LE +QR + + K S+A +I R +S L + K+ QQ
Sbjct: 553 EYEGRLERVMAQREKIISKAKSEAFSITRQAKEQSENILKELRKLETEMASKQKQQKIEA 612
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
LR S S+ L + + V KV SS +KD+K
Sbjct: 613 LRKELSDSMGN---------LQPSVKSMIVPKV------SSKEIKDLKP----------- 646
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
GD V V + + GTV+ V+ K+E +VQ+G MK + F
Sbjct: 647 -GDDVKVVTLNQDGTVVSVDKKKKEALVQIGIMKMTLPF 684
>gi|221632685|ref|YP_002521906.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
gi|254766609|sp|B9KYW4.1|MUTS2_THERP RecName: Full=MutS2 protein
gi|221157216|gb|ACM06343.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
Length = 792
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 149/212 (70%), Gaps = 1/212 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + + R+LVITGPNTGGKT+ LKTVGL +MA++GL I ++ + + F ++F
Sbjct: 327 VPIDVELGERFRILVITGPNTGGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFV 386
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+++I + Q+ + SLVLLDEI AGT+P EG AL ++LE
Sbjct: 387 DIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERL 446
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G+ L I TTH+ ELK ENA +EFD V L PTY++L G+PGRS A+ +A
Sbjct: 447 LEIGA-LGIVTTHYPELKVFATGTPGLENASVEFDPVTLSPTYRLLVGLPGRSHALEVAR 505
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
RLGLP V+ AR+L G+ + +++ +I EM+R
Sbjct: 506 RLGLPEDVIARARELLGSGAPQLDRLIAEMQR 537
>gi|222151569|ref|YP_002560725.1| recombination and DNA strand exchange inhibitor protein
[Macrococcus caseolyticus JCSC5402]
gi|222120694|dbj|BAH18029.1| recombination and DNA strand exchange inhibitor protein homolog
[Macrococcus caseolyticus JCSC5402]
Length = 783
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 213/786 (27%), Positives = 355/786 (45%), Gaps = 168/786 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLG-REATLTQ-------------------LWSINQTYQ 91
++L +LE++K+ V +F + L ++ +TQ L + QT +
Sbjct: 9 KALNILEYNKIIERVDAFTQNELSSKKVRMTQPISDKAEIDSMLAQLEEARLIEMTQT-E 67
Query: 92 DSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRR-----ASPLRPNEALAVV 146
+ +L + + + GS L+ V+L+ +K+ I+ V R A+ E V
Sbjct: 68 PGMSMLSDIQSLVRRAVIGSV---LSVVELNKIKNNIKVVNRYKTYIANLYEERELEIPV 124
Query: 147 ALLQFSETLQLS-LRAAIKEDAD---LYIRFMP-----------LTQMLYQLMDMLIRNE 191
+F + Q++ L +I+ D L+ P + + + + ++ ++R+
Sbjct: 125 MYHKFQQLPQVTELAESIQSKCDETTLFDHASPKLSEIRQEMNRINRRIKERLESIVRSS 184
Query: 192 NNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQ 246
NN+ + V+ +GR I ++ + F G++ SSSG IEP S V L+ EL
Sbjct: 185 NNQKKLSDAIVTIRNGRQVIPVRSEYKQDFPGIVHDTSSSGQTFYIEPNSIVQLSTELSA 244
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+ E +L LT ++ + + + + LDV+ A+A Y PN+
Sbjct: 245 VTHREQEEVERILYELTNEVAEYDNALTYSTDVLSDLDVLMAKAKYGNRNKMVMPNVV-- 302
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
T+ LP A+HPLL A+T ++
Sbjct: 303 --------------------NARTVDLPGAWHPLL----------------PADTVVK-- 324
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
N+S FI T+ ++ITGPNTGGKT+ L
Sbjct: 325 --------------NNIS-------------------FIG-DTQTVIITGPNTGGKTVTL 350
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
KT GL ++M +SG+ I ++E A + FD VF DIGDEQS+ QSLSTFS H+ I +I+ +
Sbjct: 351 KTTGLIILMTQSGMMIPAAEGATISVFDEVFCDIGDEQSIEQSLSTFSSHMTNIVSILKE 410
Query: 487 STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
TS S V+ DE+GAGT+P EG AL MS+L+ E +++T+ATTH+ ELK Y+
Sbjct: 411 MTSNSFVMFDELGAGTDPSEGAALAMSILDRCLEQ-NVMTMATTHYPELKAYSYNRKHVM 469
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA +EFD L PTY++L GVPG+S+A +IA++LGL ++++ARQ+ EI+ +I
Sbjct: 470 NASVEFDIETLSPTYRLLMGVPGKSNAFDIAKKLGLSPSIIKHARQMIQMDDVEIDNMIK 529
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS-DAAAIA 665
+E Q + + ++LH +L +K + +Q+ +++ DA I
Sbjct: 530 SLESNAKQMEDDRIFTEQLKLEVQSLHSDL----KKNFDSYLAQKENLIERAKQDANKIV 585
Query: 666 RSLVHKSAQQLCPSASQARSLVHKRAQQL---RPSASQSLHCTKVGKNQHVLTSNFQQTT 722
+ K A +L + +S + +L R + H TK
Sbjct: 586 KD-AEKEADELLKTLRNLKSNADIKENELIEKRSKLGEMYHETK---------------- 628
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
IK + + E+ GD V V S+G+KG ++ V+ +E +VQ
Sbjct: 629 -----------------IKADKKSTKNEVIEKGDHVKVLSYGQKGVILDVD--GKEAIVQ 669
Query: 783 VGNMKW 788
+G +K
Sbjct: 670 MGIIKM 675
>gi|379727500|ref|YP_005319685.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
gi|376318403|dbj|BAL62190.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
Length = 789
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 218/387 (56%), Gaps = 30/387 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + +VITGPNTGGKTI LKT+GL +M +SGL I ++ +++ F +FADIG
Sbjct: 320 DITIGEDYQTIVITGPNTGGKTITLKTIGLLQLMGQSGLPIPVNDNSQIGIFKEIFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +II + SLVLLDE+GAGT+P EG AL +S+L+A +
Sbjct: 380 DEQSIEQNLSTFSSHMTNIVSIIEKVDKNSLVLLDELGAGTDPQEGAALAISILDAL-NT 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
TIATTH+ ELK Y+ NA MEF+ L PTY++L GVPGRS+A +I++RLG
Sbjct: 439 KQAYTIATTHYPELKIYGYNRSGTINASMEFNIDTLSPTYRLLIGVPGRSNAFDISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L ++ ARQ+ S E+NE+I ++E + EAR+FL + L L +
Sbjct: 499 LNTKIIDEARQIMNGDSQELNEMIADLENRRKMAETEYKEARYFLNEAEQLQTEL----K 554
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
++ + +R +++K A A S+V K+ ++ + R + QQ Q
Sbjct: 555 EVYRYFHQERENEMEK---ANKQANSIVKKAQEEADAIIKEIRKMQLNTNQQTTIKEHQL 611
Query: 702 LHC-TKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
+ TK+ SN QQT EH ++ K + K + N GD V V
Sbjct: 612 IDAKTKL--------SNLQQTE----EH--------LEKNKVLKKAKAKKQLNAGDEVIV 651
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMK 787
++G+ GT++K + KE VQ+G +K
Sbjct: 652 ETYGQHGTLLK-KLDKEHWQVQLGILK 677
>gi|168334894|ref|ZP_02693015.1| MutS2 family protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 793
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 223/398 (56%), Gaps = 30/398 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+++ ++ L+ITGPNTGGKT+ LKT+GL +MA+ GL I + E +++ FD VFA
Sbjct: 317 VPIDVYVGKEFTTLLITGPNTGGKTVTLKTIGLFTIMAQCGLFIPAKENSELAIFDDVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
+GDEQS+ QSLSTFS H+ + I++ T+ SL+LLDE+G+GT+P+EG AL MS+LE
Sbjct: 377 GLGDEQSIEQSLSTFSAHMMNLIEILADMTTNSLILLDELGSGTDPVEGAALAMSILEHL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + T+ATTH+ ELK S ENA EFD +L+PTYK+L GVPG+S+A I++
Sbjct: 437 RKQ-QITTVATTHYSELKLYALSTPNVENAGCEFDIQELRPTYKLLIGVPGKSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LG P ++ +A+ + ++ ++++E+E K L A F + L +++ +
Sbjct: 496 KLGFPEHLIDDAKVFLQKENVKMEDILVELEYSKRTALVEKENALKFRQEAETLKESIKK 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR-SLVHKRAQQLRPS 697
R+K LE + ++ ++ + R + ++ L AR SL++ L+ S
Sbjct: 556 ERQK-LEVSRQKILKRAEE--KGKELLREVEIETENILKEVRQMARESLINVDENTLQ-S 611
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
Q + TK+ K+ + +DK V+KD+K VG+
Sbjct: 612 IKQKVQNTKLTKS----------SEIDKKIGYTKPKPKVLKDVK------------VGEE 649
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V SF + G V V S E VQ+G + ++ DI
Sbjct: 650 VLVISFNQSGIVTNV--SNNEATVQLGILPITVRLDDI 685
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 205 GRLCIRTGADQ-LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR CI A Q +FKG++ +SG G+ IEP + V +N+++++ ++ + +L
Sbjct: 194 GRQCIPIKAAQKTAFKGIVHDTSGSGATVFIEPAAVVEMNNKIRELMSAEQDEIQVILAT 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+EK+ +E+ II+LD++ A++ Y+L P
Sbjct: 254 FSEKISFITEELLLTFKSIIELDIIFAKSEYALKINARXP 293
>gi|397906326|ref|ZP_10507138.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
gi|397160629|emb|CCJ34475.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
Length = 788
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 220/391 (56%), Gaps = 30/391 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + LVITGPNTGGKT+ LKT GL +MA +GL I S+ + V F+ VFA
Sbjct: 315 VPIDIRLGQNYNALVITGPNTGGKTVTLKTTGLLTLMAMAGLAIPCSDGSTVSVFNKVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I NI+ ++ +SL+L+DE+GAGT+P EG AL MSLLE F
Sbjct: 375 DIGDEQSIEQSLSTFSSHMKNIINIVKEADEKSLILVDELGAGTDPSEGAALAMSLLEYF 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ L +ATTH+ E+K + FENA +EFD L+PTY++L G+PG+S+A I++
Sbjct: 435 YKKGAKL-VATTHYSEIKVFAMEKEGFENASVEFDVETLRPTYRLLIGIPGKSNAFEISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE-HVHEARHFLMLSRNLHKNLL 637
RLGL ++ AR+ A+ +VI ++ KT LE + E + + NL L
Sbjct: 494 RLGLDEGIINRAREFISKDVAKFEDVIQSLQN-KTLLLEREIDEVQK--IKRENLE--LK 548
Query: 638 RTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 697
+ + SQR ++++K + A+++ A + + K +LR
Sbjct: 549 KEYSEKKYKLESQRDKEIKK-----------AQEEARRIIRQAKEEADAILKELNELRKR 597
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
A ++ + + + L + + + E +D+K VGD
Sbjct: 598 ALEAESIREAEEARKKLKNKLDAMSSKEEEVIVKDGMIEARDVK------------VGDE 645
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V+VS+ KGTV+ + +K E++VQ+G MK
Sbjct: 646 VYVSTVSAKGTVLSLPDAKGEVLVQIGVMKM 676
>gi|422860938|ref|ZP_16907582.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK330]
gi|327468589|gb|EGF14068.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK330]
Length = 777
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S +SLH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKSLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|410456530|ref|ZP_11310390.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
gi|409927914|gb|EKN65039.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
Length = 785
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 234/432 (54%), Gaps = 42/432 (9%)
Query: 374 ARKGEKDTNLSP---SEMQVSALELAHP-VPID------IFIARKTRVLVITGPNTGGKT 423
AR G+K P +E ++S + HP +PID I + + +VITGPNTGGKT
Sbjct: 283 ARFGKKIKASKPLMNNEGRISLYKARHPLIPIDEVVANDIMLGNEFTTIVITGPNTGGKT 342
Query: 424 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 483
+ LKT+GL +MA++GL + + + +++ FD+V+ADIGDEQS+ QSLSTFS H+ I +I
Sbjct: 343 VTLKTLGLCSLMAQAGLQVPALDGSELAVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDI 402
Query: 484 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 543
++ SLVL DE+GAGT+P EG AL +S+L+ + G+ + IATTH+ ELK Y+ +
Sbjct: 403 LNSVDFNSLVLFDELGAGTDPQEGAALAISILDEVHKRGARV-IATTHYPELKAYGYNRE 461
Query: 544 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 603
NA +EFD L PTYK+L GVPGRS+A I++RLGL V+Q AR + +I++
Sbjct: 462 GVLNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDWVIQAARSHVSEDTNQIDK 521
Query: 604 VIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
+I +E K Q E EAR +L + LH +L + + E S + +K +D
Sbjct: 522 MIASLESSKRQAEEEQMEARDYLKQAEKLHLDLQKQMIEFYEKKDSMLEKAAEKAADIVD 581
Query: 664 IARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTV 723
A+ + A+Q+ + R+ H + +H L +
Sbjct: 582 EAK----QEAEQVIRDLRKMRTEKHAEIK------------------EHEL--------I 611
Query: 724 DKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQV 783
D A+ + K + + + + GD V V +F +KGT+++ + S E VQ+
Sbjct: 612 DAKRRLQDAAPEIKKSVNLANKKNKMHTYMPGDEVKVLTFDQKGTLLE-KVSANEWQVQI 670
Query: 784 GNMKWIMKFTDI 795
G +K +K D+
Sbjct: 671 GILKMKVKEKDM 682
>gi|225869842|ref|YP_002745789.1| DNA mismatch repair protein [Streptococcus equi subsp. equi 4047]
gi|254766601|sp|C0MAV6.1|MUTS2_STRE4 RecName: Full=MutS2 protein
gi|225699246|emb|CAW92550.1| putative DNA mismatch repair protein [Streptococcus equi subsp.
equi 4047]
Length = 778
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 229/401 (57%), Gaps = 45/401 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 631
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 692 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
+ L+P ++ H K + L+ N V+K + K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN-----------------KVLK------KAKKWR 626
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
>gi|421489730|ref|ZP_15937106.1| MutS2 family protein [Streptococcus anginosus SK1138]
gi|400374318|gb|EJP27237.1| MutS2 family protein [Streptococcus anginosus SK1138]
Length = 776
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 217/386 (56%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L +AHP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVAHPLIENAVANDLYFAANLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++V FD +FADIGDEQS+ QSLSTFS H+ I +I+ ++ +LVLLDE+GAGT+P
Sbjct: 357 DEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVSILEKADENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK + +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKVYGIETEGVQNASMEFDTESLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL VV++A++L S ++N VI ER + Q LE +R
Sbjct: 476 QGVPGRSNAFEIARRLGLSDRVVKDAQELTDTDS-DVNRVI---ERLEKQTLE----SRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R L+ ++ R+ + + A + AQ++ A
Sbjct: 528 RLDNIREVEQENLKFNRA-LKKLYNEFNREKEAELNKARL-------EAQEIIDVALTES 579
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
+ K +LH K ++ + Q + P T S K +KQ+
Sbjct: 580 DTILK-----------NLHAKSSLKPHEIIEAKSQLKKL----APETVDLSQNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G++GT++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLV 647
>gi|294781853|ref|ZP_06747185.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
gi|294481664|gb|EFG29433.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
Length = 778
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S +V +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREVLSLERARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I++ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I ++ ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKAAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFEEI 678
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFDEPSLANAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KFD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
++ + D+I + + + LD++NA++ Y++ P +
Sbjct: 256 LRNNRDDILAIGDKALYLDILNAKSIYAVDNKCEIPTV 293
>gi|417891970|ref|ZP_12536027.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
gi|341851256|gb|EGS92185.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
Length = 782
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 218/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
L+ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EGTAL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGTALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|297544938|ref|YP_003677240.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296842713|gb|ADH61229.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 791
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 234/467 (50%), Gaps = 93/467 (19%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+FKG++ SSSG IEP+ V LN+EL+Q + + +L L+++++ +
Sbjct: 208 TFKGIVHDQSSSGATLFIEPMQVVDLNNELRQVELKERQEIQRILFELSQEVKKYAQALF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + +LD A+A YSL P + ++ + I L
Sbjct: 268 NDIEIVSELDFTFAKAKYSLKLKAVRPEL-------NTMGY---------------INLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL+ Q E
Sbjct: 306 KARHPLINQ--------------------------------------------------E 315
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
P+ DI+I + LVITGPNTGGKT+ LKTVGL +MA +GL+I + E ++V F+
Sbjct: 316 AVVPI--DIYIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+F DIGDEQS+ QSLSTFS H+ I +++ + L LLDE+GAGT+P+EG AL MS+
Sbjct: 374 EIFVDIGDEQSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + G+ TIATTH+ ELK ENA +EFD LKPTYK++ G+PG+S+A
Sbjct: 434 LDTLHKIGA-KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH- 633
IA+RLGLP ++++AR+ + + ++I ++E + + + HE L +N+
Sbjct: 493 EIAKRLGLPRQIIEDARKYISGEALKFEDIIADVENKRRELEKANHEV---AFLRKNVEI 549
Query: 634 ---------KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHK 671
K L R KIL+ A +R RK+ + +A A ++ K
Sbjct: 550 LKEELEKEKKRLQNERDKILKE-AKERARKI--VQEAKFTAEGIIKK 593
>gi|365924477|ref|ZP_09447240.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265357|ref|ZP_14767919.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394428189|gb|EJF00772.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 786
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 276/565 (48%), Gaps = 105/565 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EP V LN+ L+Q +++ + +L L++ + EI + + +
Sbjct: 216 SASGQTVFVEPKQIVELNNRLKQQQSNEKEEVARILRELSQLIAPYTTEIRQNVYLLGVF 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D VNA+A Y+ T EP+ S E +YL + +HPLL
Sbjct: 276 DFVNAKAQYAAQIKAT----------------EPLLST------ENKVYLRQVWHPLL-- 311
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
D+++A V DI
Sbjct: 312 -----------DMKAA---------------------------------------VRNDI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ R +V+TGPNTGGKTI LKT+GL +M ++GL I + E +++ FD++FADIGDE
Sbjct: 322 MLGDDYRAIVVTGPNTGGKTITLKTLGLVQLMGQAGLFIPAFEESRIGIFDNIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+S+ +SL+L DE+GAGT+P EG AL +S+L+ + S S
Sbjct: 382 QSIEQSLSTFSSHMTNIVSILSEIDDKSLILFDELGAGTDPQEGAALAISILD-YVGSKS 440
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ATTH+ ELK Y NA MEFD LKPTY +L G+PGRS+A++I+++LGL
Sbjct: 441 SYVMATTHYPELKAYGYERPQTINASMEFDIESLKPTYHLLLGIPGRSNALDISKKLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
+++ A+QL + ++N++I ++ + Q E E L SR LH +L K
Sbjct: 501 DVIIMQAKQLTAGQNQDLNDMIQDLVAKRHQVEEESIELHKNLEESRKLHDDL----GKK 556
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+ +QR + + D A + ++ A++ + +++R +A ++
Sbjct: 557 YDEFVNQR----ENLLDNA-------RRKGNEIVEQAAKKSEKIIAELRKMRLNAGTTIK 605
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSF 763
K+ + L + Q T + K + V++ R K ++ D V V S+
Sbjct: 606 EDKLISAKARLNALEQPTNLKK--------NRVLR------RAKEKQILKPDDDVLVKSY 651
Query: 764 GKKGTVIKVEPSKEEIVVQVGNMKW 788
G++G +++ + E VQ+G +K
Sbjct: 652 GQRGVLLR-KAGNHEWEVQLGILKM 675
>gi|387930060|ref|ZP_10132737.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
gi|387586878|gb|EIJ79202.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
Length = 785
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 170/261 (65%), Gaps = 8/261 (3%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L +E ++S ++ HP VP DI + + +VITGPNTGGKT+ LKTVGL +M
Sbjct: 295 LMNNEGRISLIKARHPLIPIDEVVPNDISLGKDFSTIVITGPNTGGKTVTLKTVGLCTLM 354
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
A+SGL I + + +++ F SV+ADIGDEQS+ QSLSTFS H+ I +I+++ SLVL
Sbjct: 355 AQSGLQIPALDGSEMAVFGSVYADIGDEQSIEQSLSTFSSHMVNIVDILNKVDFNSLVLF 414
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL +S+L+ + G+ + IATTH+ ELK Y+ + NA +EFD
Sbjct: 415 DELGAGTDPQEGAALAISILDEVYKRGAKV-IATTHYPELKVYGYNREGVINASVEFDIE 473
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
L PTYK+L GVPGRS+A I++RLGL V+ NAR GA S+++ ++I +E + Q
Sbjct: 474 TLSPTYKLLIGVPGRSNAFEISKRLGLDEKVINNARSYVGADSSQVEKMIASLESSRRQT 533
Query: 616 LEHVHEARHFLMLSRNLHKNL 636
+ EA L + LHK+L
Sbjct: 534 EADLEEANDLLKQAEKLHKDL 554
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 61/299 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTY-QDSLRLLDETNAAIEMQKHGSC 112
L+VLE+DK+ + A +SLGRE + QL + TY + ++L +ET+ A+++
Sbjct: 6 LKVLEFDKVKEQLLEHASSSLGRE-KVNQL--VPSTYFHEVVQLQEETDEAVKV------ 56
Query: 113 SLDLTG-VDLSLVKSAIREVRRAS---PLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
L L G V L + +RA+ L P+E + V + + S L+ + +E D
Sbjct: 57 -LRLKGNVPLGGIFDIRPHTKRAAIGGSLSPHELIQVASTVHASRQLKRFIEDLNEETND 115
Query: 169 LYI------RFMPLTQM-----------------------------------LYQLMDML 187
L I R + L ++ + + ++ +
Sbjct: 116 LPILAKYVERIIVLAELEEAIKHAIDESGEVLDGASETLRSLRQQLRTKEARVRERLESM 175
Query: 188 IRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLND 242
IR+ N + + + V+ + R I + ++ G ++ SSSG IEP + V LN+
Sbjct: 176 IRSSNAQKMLSDAIVTIRNDRFVIPVKQEYRTYYGGIIHDQSSSGQTLFIEPQAIVQLNN 235
Query: 243 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+LQ R + E +L L++K+ E+E ++ + +LD + A+A YS + P
Sbjct: 236 DLQATRVKEQQEIERILHELSQKVGEYSGELETIVLVLAELDFMFAKARYSSKIKASKP 294
>gi|374296809|ref|YP_005047000.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
gi|359826303|gb|AEV69076.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
Length = 793
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 219/397 (55%), Gaps = 26/397 (6%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID +I LV+TGPNTGGKT+ LKTVGL +MA++GLHI + E + F+ VFA
Sbjct: 318 VPIDFWIGEDFHTLVVTGPNTGGKTVTLKTVGLFTLMAQAGLHIPAGEGTVLSVFNKVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I NI+ ++LVL DE+GAGT+P EG AL M++LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENIDDRTLVLFDELGAGTDPTEGAALAMAILEHL 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G + +ATTH+ +LK + + ENAC EFD LKPTYK+L GVPGRS+A I++
Sbjct: 438 KDRGCTV-VATTHYSQLKVYAVTTPYVENACCEFDVETLKPTYKLLIGVPGRSNAFAISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ A+ + + ++++ +E+ +++++ + + ++ L + +
Sbjct: 497 RLGLTDSVIERAKSYLTSEEIKFEDMLLNIEK-------NLNQSENEKLQAQLLKQEAEK 549
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ ++ +K + + +A AR L+ + + S+ R + +R A
Sbjct: 550 IKSEMENEKRKLEEKKEKILREAREEARKLLLNAKHEADNILSEMRRIQKERENIQSQKA 609
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
++ + L SN +D +E + S + + P+ + GD V
Sbjct: 610 AEEMRLK--------LKSN-----IDTIEDALSKSVMPKNTLVKPPKNLKP-----GDSV 651
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + ++GTVI E +VQVG MK + T++
Sbjct: 652 LIVNLNQRGTVITPPDRDGEAIVQVGIMKINVHITNL 688
>gi|328956937|ref|YP_004374323.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
gi|328673261|gb|AEB29307.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
Length = 791
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 229/418 (54%), Gaps = 41/418 (9%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E +V L HP V DI I + + ++ITGPNTGGKTI LKT+GL +M ++G
Sbjct: 301 ENEVKLLSARHPLLDPETVVANDILIGGENQAVIITGPNTGGKTIILKTLGLLQLMGQAG 360
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L I + +++ F +FADIGDEQS+ QSLSTFS H+ I +I+ + ++SL++ DE+G
Sbjct: 361 LQIPVAPESQIGLFTEIFADIGDEQSIEQSLSTFSSHMTNIVSILDRMDNKSLIIFDELG 420
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL +++L+ GS + + T+H+ ELK Y+ NA MEFD L P
Sbjct: 421 AGTDPQEGAALAIAILDKVGAVGSYVMV-TSHYPELKAYGYNRPQTINASMEFDVDTLSP 479
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TY++L GVPGRS+A I++RLGL V+ +ARQL S +NE+I ++E +
Sbjct: 480 TYRLLIGVPGRSNAFEISKRLGLSEEVIDSARQLIDGESQNLNEMISDLENRRKMAETEY 539
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRF--RKVQKISDAAAIARSLVHKSAQQLC 677
E RH++ + LH +L A Q+F + + + A A SLV ++ +
Sbjct: 540 LEVRHYVDEAEQLHTDL---------QTAVQQFYAEREELMKKAREKANSLVEETEE--- 587
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
+A Q + LR Q H V K ++ + Q + + + E A A + V+
Sbjct: 588 -TADQI-------IKDLRKKQIQG-HYENV-KEHELIDAKTQLSGLRQEE--ALAKNKVL 635
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K + K ++ GD V V SFG+KG +++ K VVQ+G +K +K +D+
Sbjct: 636 K------KAKAKQVMKPGDDVMVQSFGQKGVLME-RADKNHWVVQMGMLKMKLKESDL 686
>gi|422827141|ref|ZP_16875320.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK678]
gi|422852980|ref|ZP_16899644.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK160]
gi|324994245|gb|EGC26159.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK678]
gi|325697914|gb|EGD39798.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK160]
Length = 777
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIEMDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL +VV++A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVVVRHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|403237728|ref|ZP_10916314.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 10403023]
Length = 786
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 215/790 (27%), Positives = 362/790 (45%), Gaps = 160/790 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGSC 112
L+VLE+DK+ + +SLGRE + S N ++ + L ++T+ A ++ + G+
Sbjct: 6 LKVLEFDKVKEQLKQHVSSSLGREKVDKMIPSTN--VEEVIFLQEQTDEAAKVLRLKGNV 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
L L+ +++A++ L E L + + ++ + I++D +L I
Sbjct: 64 PLG----GLTDIRAAVKRASIGGALNTLELLDIAGTIYAGRQMKKFIEGMIEDDIELPIL 119
Query: 173 FMPLTQM--LYQLMDMLIRNENNESLFLEVSS----------------IHGRL--CIRTG 212
+T + LY+L + ++ + ++ +S I +L IR+
Sbjct: 120 AELITSITPLYELEQKIKNCIDDNGVVMDGASDKLRGIRQQLRSSEARIREKLDHIIRSS 179
Query: 213 ADQLSFKGLLL--------------------------SSSGIGSVIEPLSAVPLNDELQQ 246
+ Q + ++ SSSG IEP S V LN+ LQ+
Sbjct: 180 SAQKTLSDAIITIRNDRYVIPVKQEYRGTYGGIVHDQSSSGATLFIEPQSVVDLNNVLQE 239
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
AR + + +L L+ ++ ++ + + + ++ + +LD + +A+YS G+ P I
Sbjct: 240 ARVKEKQEIDRILFELSNEVALETESLYQNVDTLGELDFMFTKASYSKKVKGSKPKI--- 296
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
+ + K HPL+ A KD+ + EL
Sbjct: 297 -------------------NGNGYVLIKKGRHPLI----------APKDVVPNDIEL--- 324
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
G+K T+ +VITGPNTGGKT+ L
Sbjct: 325 ----------GKKYTS-----------------------------IVITGPNTGGKTVTL 345
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
KT+GL +MA+SGL I + E +++ F+SV+ADIGDEQS+ QSLSTFS H+ I +I+ +
Sbjct: 346 KTIGLLTIMAQSGLQIPAQEESEIAVFESVYADIGDEQSIEQSLSTFSSHMVNIVDILKR 405
Query: 487 STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
S SLVL DE+GAGT+P EG AL +S+L+ G+ + IATTH+ ELK Y+ +
Sbjct: 406 VDSTSLVLFDELGAGTDPQEGAALAISILDEVYNRGARV-IATTHYPELKAYGYNREGVI 464
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA +EFD L PTYK+L GVPGRS+A I++RLGL ++ A+ + + + +I
Sbjct: 465 NASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSDTIIHAAKSHISSETNTVENMIA 524
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIAR 666
+E+ K + EA + LHK L + +I+E QR + +K
Sbjct: 525 SLEKSKKDAERELDEAEGIRKQAEILHKQL---QEQIIEFN-EQRDKLYEKAE------- 573
Query: 667 SLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK 725
K+ + + + ++A ++ R +L QSL V ++Q + + V
Sbjct: 574 ---RKAEETIKNATTEAEEVIRDLRKMKLE---QQSL----VKEHQLIEAKKRLENAV-- 621
Query: 726 VEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGN 785
P T+ + + I + + KR +P GD V V S +KG +I+ E VQ+G
Sbjct: 622 ---PQTSKKTNKQAI--ASKAKRKLVP--GDEVKVISLNQKGHLIE-NTGNNEWQVQIGI 673
Query: 786 MKWIMKFTDI 795
+K +K D+
Sbjct: 674 LKMKVKEKDL 683
>gi|125717226|ref|YP_001034359.1| DNA mismatch repair protein [Streptococcus sanguinis SK36]
gi|229486385|sp|A3CKV4.1|MUTS2_STRSV RecName: Full=MutS2 protein
gi|125497143|gb|ABN43809.1| DNA mismatch repair protein, putative [Streptococcus sanguinis
SK36]
Length = 777
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGLDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA+RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIAQRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|423138020|ref|ZP_17125663.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
gi|371958582|gb|EHO76291.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
Length = 778
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ A+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAKAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQAGILKLEVPFNEI 678
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 123 LVKSAIREVRRASPLRPNEALAVVALLQFSETL---QLSLRAAIKEDADLYIRFMPLTQM 179
+ KS + E+ + LR E + + L+ E + ++ IK+DA L +R + L +
Sbjct: 102 IFKSKLDELGKYKQLR--ETIGNIPNLRLIEDVINKTINAEKEIKDDASLDLRDIRLHK- 158
Query: 180 LYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRTGADQLSFKGLL------ 222
+ ++M I+ + E LF E ++ GR+ D FKGL+
Sbjct: 159 --KTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPVKYD---FKGLIKGIEHD 212
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
SSSG IEPLS V LN+++++ + +LL + E ++ + D+I + ++
Sbjct: 213 RSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAELLRNNKDDILTIGEKVMY 272
Query: 283 LDVVNARATYS 293
LD++NA++ Y+
Sbjct: 273 LDILNAKSIYA 283
>gi|323490483|ref|ZP_08095690.1| MutS2 protein [Planococcus donghaensis MPA1U2]
gi|323395887|gb|EGA88726.1| MutS2 protein [Planococcus donghaensis MPA1U2]
Length = 786
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 249/497 (50%), Gaps = 88/497 (17%)
Query: 184 MDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAV 238
++ L+R +N + + V+ + R I + S G ++ SSSG IEP S V
Sbjct: 174 LESLVRGKNASKMLSDSIVTIRNDRFVIPVKQEYRSHYGGIVHDQSSSGQTLFIEPDSVV 233
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 298
N+E+++ + + + +L+ L+ ++Q E+ +++ + ++D++ A+A Y + G
Sbjct: 234 QANNEVRRLKMKEKEEIDRILMMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKG 293
Query: 299 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 358
T P + E I L KA HP++
Sbjct: 294 TKPTM----------------------NTEGYINLKKARHPMI----------------- 314
Query: 359 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 418
P E VP DI R +VITGPN
Sbjct: 315 --------------------------PKE---------EVVPNDIEFGRDITAIVITGPN 339
Query: 419 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 478
TGGKT+ LKTVGLA +MA+SGL + + + +++ FD +FADIGDEQS+ QSLSTFS H+
Sbjct: 340 TGGKTVTLKTVGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMV 399
Query: 479 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 538
I +I+++ SLV+ DE+GAGT+P EG AL +SLL+ G+ + IATTH+ ELK
Sbjct: 400 NIVDILTKFDENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARV-IATTHYPELKAY 458
Query: 539 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 598
++ NA +EFD L PTY++L GVPGRS+A I++RLGLP ++ +A+ G S
Sbjct: 459 GFNRPGVANASVEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFTGTDS 518
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR------TRRKILEHCASQRF 652
++ +I +E+ + + + + L S L K L + +++ E A ++
Sbjct: 519 KAVDSMIASLEKSRREAEQDAERTQEVLSESEQLKKELAQQLEEYEQKKEQREEKAKEKA 578
Query: 653 RKVQKISDAAAIARSLV 669
RK+ + +A A A S++
Sbjct: 579 RKI--VDEARAEAESVI 593
>gi|385265748|ref|ZP_10043835.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
gi|385150244|gb|EIF14181.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
Length = 785
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 275/581 (47%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE EI
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIA 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + LD + A+A Y+ + T P + + I L
Sbjct: 268 HNVEVLQTLDFIFAKARYAKAMKATKPLM----------------------NGDGFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL Q Q D+E GG+ +
Sbjct: 306 KARHPLLPQD-----QVVANDIE-----------LGGDYS-------------------- 329
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+VITGPNTGGKT+ LKT+GL +MA++GLHI + E ++ FD
Sbjct: 330 ----------------TIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEASVFD 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+VFADIGDEQS+ QSLSTFS H+ I NI+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDEVHRTNARV-LATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I+ RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E Q+ + +++ AA K A+Q+ + RS+
Sbjct: 553 EL---QQQIIE-LNDQKDKMMEEAEQKAAEKLEAAAKEAEQII---RELRSI-------- 597
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
K +H S + +D + A + K + + ++
Sbjct: 598 --------------KQEH--RSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELKP 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + ++E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGALLE-KTGEKEWNVQIGILKMKVKEKDL 681
>gi|376260578|ref|YP_005147298.1| MutS2 family protein [Clostridium sp. BNL1100]
gi|373944572|gb|AEY65493.1| MutS2 family protein [Clostridium sp. BNL1100]
Length = 792
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 222/397 (55%), Gaps = 42/397 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
+PID +I K L++TGPNTGGKT+ LKTVGL +M +SGL + ++E ++ F+ ++A
Sbjct: 317 IPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMVQSGLLVPANEGTEMSVFEKIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I+S ++SL+LLDE+GAGT+P EG AL MS+LE+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILESL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ T+ATTH+ ELK S ENA EFD L+PTY++L GVPG+S+A I++
Sbjct: 437 HQMGA-TTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ +++ ++++ +E+ +++ + A + + L K+L
Sbjct: 496 RLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLED 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 690
+R++ A+Q+ +++K A AR ++ S Q S+ + L V ++
Sbjct: 556 QKRRL----AAQKESELRK---AREEARRILTDSKHQADELVSEMKRLAKEQEEAEVRRQ 608
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
++LR ++S++ N + V+ + P K++K
Sbjct: 609 TEELRQRLNKSIN-------------NLDDSLVESI-MPRQGLVKPPKNLKP-------- 646
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
GD V + + +KGT++ + E VQ G MK
Sbjct: 647 ----GDTVLIVNLNQKGTILSLPDKNGEAQVQAGIMK 679
>gi|422852435|ref|ZP_16899105.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK150]
gi|325693761|gb|EGD35680.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK150]
Length = 777
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 219/390 (56%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARVEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + +T + K+ P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEA---KTQLKKL-APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|296327726|ref|ZP_06870266.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155164|gb|EFG95941.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 778
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP P+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNKEILSLEKARHPFIDKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQSGILKLEVPFDEI 678
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 24/149 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSL 294
++ + D+I + ++ LD++NA++ Y++
Sbjct: 256 LRNNKDDILIIGEKVMYLDILNAKSIYAV 284
>gi|379705968|ref|YP_005204427.1| Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682667|gb|AEZ62956.1| Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 778
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 218/394 (55%), Gaps = 46/394 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LINPVANDLHFLDELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I++ + SLVL+DE+GAGT+P EG +L +S+
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVDILAAADKDSLVLVDELGAGTDPQEGASLAISI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHLRLT-QVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL ++V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEVIVNEAERLTDS-DTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L HK + L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNLHHKAS--L 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
GD + V+++G++GT+I Q N KW
Sbjct: 631 GDDIIVTAYGQRGTLIN----------QTKNGKW 654
>gi|262281894|ref|ZP_06059663.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
gi|262262348|gb|EEY81045.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
Length = 777
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 219/392 (55%), Gaps = 41/392 (10%)
Query: 386 SEMQ-VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
SE Q + L++ HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SG
Sbjct: 292 SETQAIQLLQVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSG 351
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+G
Sbjct: 352 LPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELG 411
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+P
Sbjct: 412 AGTDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIEMDWVENASMEFDTDSLRP 470
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TY+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L
Sbjct: 471 TYRFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTNTDS-DVNRII---ERLEEQTL--- 523
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
E+R L R + + L+ R + + K +++ A A+ +V L S
Sbjct: 524 -ESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALS 577
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD 739
S+ S Q+LH K ++ + Q + P T S K
Sbjct: 578 ESE--------------SILQNLHAKSSLKPHEIIEAKSQLKKL----APETVDLSKNKV 619
Query: 740 IKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
+KQ+ K+ P VGD + V+S+G++GT++K
Sbjct: 620 LKQA---KKHRAPKVGDDILVTSYGQRGTLVK 648
>gi|218195837|gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
Length = 916
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 200 VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
V+ R+C+ A L G++LSSSG G+ +EP A+ LN+ ++ + +AE
Sbjct: 258 VTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNN-MEVKLSGDERAE 316
Query: 256 EDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
E +L L D + +I ++ I++LD+ AR +Y+L P F +D L
Sbjct: 317 ELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVRP-AFTDRDSDTQL- 374
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+ E ++++ HPLLL+Q +++
Sbjct: 375 ---------NPNSECSVFIEGIQHPLLLEQSLSMVKES---------------------- 403
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
T + ++ L P+P+D+ + TR++VI+GPNTGGKT +KT+GLA +
Sbjct: 404 ------TGVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASL 457
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+ ++ I+ + SLVL
Sbjct: 458 MSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVL 517
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
+DEIG+GT+P +G AL S+L+ A S L I TTH+ +L LK +D FENA MEF
Sbjct: 518 IDEIGSGTDPSDGVALSTSILKYLA-SRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCL 576
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
L+PTY+ILWG G S+A++IA+ +G V+ A++
Sbjct: 577 ETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQE 614
>gi|422845877|ref|ZP_16892560.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK72]
gi|325688400|gb|EGD30418.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK72]
Length = 777
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 219/390 (56%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLKQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + +T + K+ P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEA---KTQLKKL-APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|262067259|ref|ZP_06026871.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
gi|291379033|gb|EFE86551.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
Length = 778
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S +V +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREVLSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I++ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I ++ ++ + +
Sbjct: 532 EMRERFARLEEEARLDRERAKQETLIIEKQKNE-------------IIKAAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFEEI 678
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFDEPSLANAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KFD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
++ + D+I + + + LD++NA++ Y++ P +
Sbjct: 256 LRNNRDDILAIGDKALYLDILNAKSIYAVDNKCEIPTV 293
>gi|32487407|emb|CAE05741.1| OSJNBb0017I01.21 [Oryza sativa Japonica Group]
Length = 921
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 200 VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
V+ R+C+ A L G++LSSSG G+ +EP A+ LN+ ++ + +AE
Sbjct: 263 VTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNN-MEVKLSGDERAE 321
Query: 256 EDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
E +L L D + +I ++ I++LD+ AR +Y+L P F +D L
Sbjct: 322 ELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVRP-AFTDRDSDTQL- 379
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+ E ++++ HPLLL+Q +++
Sbjct: 380 ---------NPNSECSVFIEGIQHPLLLEQSLSMVKES---------------------- 408
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
T + ++ L P+P+D+ + TR++VI+GPNTGGKT +KT+GLA +
Sbjct: 409 ------TRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASL 462
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+ ++ I+ + SLVL
Sbjct: 463 MSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVL 522
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
+DEIG+GT+P +G AL S+L+ A S L I TTH+ +L LK +D FENA MEF
Sbjct: 523 IDEIGSGTDPSDGVALSTSILKYLA-SRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCL 581
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
L+PTY+ILWG G S+A++IA+ +G V+ A++
Sbjct: 582 ETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQE 619
>gi|438001664|ref|YP_007271407.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
gi|432178458|emb|CCP25431.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
Length = 549
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 151/219 (68%), Gaps = 7/219 (3%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VP+D+++ + +L+ITGPNTGGKT+ LKTVGL ++MA+SGLH+ + E +V
Sbjct: 307 HPLLKGEVVPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFILMAQSGLHLPAQEGTEV 366
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
F+ VFADIGDEQS+ QSLSTFS H+K I I+ +T SL++LDE+GAGT+P EG AL
Sbjct: 367 SIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLIILDELGAGTDPTEGAAL 426
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M++L E GS + +ATTH+ ELKT +S + ENA MEFD L PTY++ G+PG+
Sbjct: 427 AMAILNYLYEKGSRV-LATTHYSELKTFAFSKEGVENASMEFDIQTLSPTYRLTIGIPGK 485
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
S+A IA+RLGL VV + L S ++ +++ +E
Sbjct: 486 SNAFEIAKRLGLKQEVVDLGKSLMAEESLKLEDLLTHIE 524
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 45/288 (15%)
Query: 56 VLEWDKLC-----HSVSSFARTSLGR--------------EATLTQLWSINQTYQDSLRL 96
+LE+DK+ ++VSS A+ + R T L +N + SLR
Sbjct: 8 ILEYDKIKSILMEYAVSSLAKEKIARMRPSSDEDLVKMLQRETSEGLALLNSGIKISLRG 67
Query: 97 LDETNAAIEMQKHGSCSLDLTGVDLS-------LVKSAIREVRRASPLRPNEALAVVALL 149
+ + ++ + K GS +D++ L+KSA E + A + NE +V L
Sbjct: 68 IKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSAWNEKKPADSVIINE---IVNGL 124
Query: 150 QFSETLQLSLRAAIKEDADLYIRFMP-LTQMLYQLMDML--IRNENNE---SLFLE---- 199
++L+ + AI D ++ P L+ + Q ++ IRN+ NE S + +
Sbjct: 125 HIFQSLEEKIEKAIVSDEEIADNASPKLSSIRRQKKNLAQSIRNKLNEIISSPYYQKALQ 184
Query: 200 ---VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTK 253
V+ R + + + S +G++ S+SG IEP++ + +N+EL+Q K
Sbjct: 185 DPIVTVRQDRYVVPVKQEFRGSIQGVIHDQSASGATLYIEPMAVMQMNNELRQLEIEEKK 244
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
E +L ++K+Q + D I L G+ LD + A+A YSL GT P
Sbjct: 245 EIERILWDFSKKVQENYDFIHDTLYGLAHLDFIMAKAGYSLDIKGTEP 292
>gi|220928895|ref|YP_002505804.1| MutS2 family protein [Clostridium cellulolyticum H10]
gi|254766596|sp|B8I1Z8.1|MUTS2_CLOCE RecName: Full=MutS2 protein
gi|219999223|gb|ACL75824.1| MutS2 family protein [Clostridium cellulolyticum H10]
Length = 792
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 222/397 (55%), Gaps = 42/397 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID +I K L++TGPNTGGKT+ LKTVGL +M +SGL + +++ ++ F+ ++A
Sbjct: 317 VPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMMQSGLLVPANDGTEMSVFEKIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I+S ++SL+LLDE+GAGT+P EG AL MS+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILECL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ T+ATTH+ ELK S ENA EFD L+PTY++L GVPG+S+A I++
Sbjct: 437 HQMGA-TTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ +++ ++++ +E+ +++ + A + + L K+L
Sbjct: 496 RLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLED 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 690
+R++ A+Q+ +++K A AR ++ S +Q S+ + L V ++
Sbjct: 556 QKRRL----AAQKESELRK---AREEARRILTDSKRQADELVSEMKRLAKEQEEAEVRRQ 608
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
++LR ++S++ N + V+ + P K++K
Sbjct: 609 TEELRQKLNKSIN-------------NLDDSLVESI-MPRQGLVKPPKNLKP-------- 646
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
GD V + + +KGTV+ + E VQ G MK
Sbjct: 647 ----GDTVLIVNLNQKGTVLTLPDKNGEAQVQAGIMK 679
>gi|358466142|ref|ZP_09175997.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
gi|357069345|gb|EHI79268.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
Length = 778
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S +V +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREVLSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I++ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGVETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I ++ ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKAAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFEEI 678
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFDEPSLANAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KFD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
++ + D+I + + + LD++NA++ Y++ P +
Sbjct: 256 LRNNRDDILAIGDKAMYLDILNAKSIYAVDNKCEIPTV 293
>gi|422877961|ref|ZP_16924431.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1056]
gi|332358156|gb|EGJ35986.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1056]
Length = 777
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDKIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QT---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|384044690|ref|YP_005492707.1| MutS2 family protein [Bacillus megaterium WSH-002]
gi|345442381|gb|AEN87398.1| MutS2 family protein [Bacillus megaterium WSH-002]
Length = 660
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 284/574 (49%), Gaps = 109/574 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP + V LN+ELQ+A+ + E +L+ALT ++ +E+ + + + +L
Sbjct: 91 SSSGATLFIEPQAIVTLNNELQEAKVKEKQEIERILIALTVQVAEVANELRQNVYLLGEL 150
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+ YS HE SK ++R + I L KA HPL+ Q
Sbjct: 151 DFMFAKGRYS---------------------HELKASKPKMNDRGY-IKLVKAKHPLIAQ 188
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
+D+ + + EL G++ T++
Sbjct: 189 ----------EDVVANDIEL-------------GDQYTSI-------------------- 205
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
VITGPNTGGKT+ LKT+GL +MA++GL I + + +++ F VFADIGDE
Sbjct: 206 ---------VITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDE 256
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +S+L+ E G+
Sbjct: 257 QSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILDQVYERGA 316
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++RLGL
Sbjct: 317 RV-VATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLS 375
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+ G+ + ++ +I +E + Q + EA ++ LHK L + +I
Sbjct: 376 AEVIERAKGYIGSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKLHKEL---QSQI 432
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+E K K+ + A + AQ +AS+ K LR
Sbjct: 433 IEFN-----EKRDKLYEKA-------EEKAQATVKAASEE---AEKIISDLR-------- 469
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV--KRTELPNVGDLVHVS 761
K+ + H L + K A + ++ K+ P V K+ GD V V
Sbjct: 470 --KMSQKNHALVKEHELIEARKRLEDAVPT---LEKSKKKPAVPKKQERTLQAGDEVKVL 524
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
S+G+KGT+++ S E VQ+G MK +K D+
Sbjct: 525 SWGQKGTLVE-RVSNNEWQVQMGIMKMKVKEKDL 557
>gi|377831881|ref|ZP_09814846.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
gi|377554259|gb|EHT15973.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
Length = 792
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 276/569 (48%), Gaps = 122/569 (21%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKM---QVDLDEIEKMLNGI 280
S+SG IEP S V LN+ L+Q++ + VL AL+ + ++D+ K+L
Sbjct: 217 SASGQTLYIEPASTVDLNNRLRQSQIEERQEVRRVLAALSTMLAPYRLDIQNNAKILG-- 274
Query: 281 IQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPL 340
LD VNA+A + D K +L P+ S+ + L KA HPL
Sbjct: 275 -HLDFVNAKAK-------------MAHDTKATL---PLLSQAGQ------VVLKKARHPL 311
Query: 341 LLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVP 400
+ P + V
Sbjct: 312 ------------------------------------------IDPKK----------AVA 319
Query: 401 IDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADI 460
DI + + +VITGPNTGGKTI LKT+GL +M +SG+ I ++E + + +D +FADI
Sbjct: 320 NDIKLGQDYHAIVITGPNTGGKTITLKTLGLIQLMGQSGMFIPAAEGSTIAVYDEIFADI 379
Query: 461 GDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAE 520
GDEQSL Q+LSTFSGH++ + I+ Q+T+ SLVLLDE+GAGT+P EG AL M++L+
Sbjct: 380 GDEQSLEQNLSTFSGHMENVKAILDQTTAHSLVLLDELGAGTDPKEGAALAMAILDKIGA 439
Query: 521 SGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERL 580
GS + + TTH+ ELK Y NA MEFD+ L+PTY++L G+PG+S+ I IA+RL
Sbjct: 440 LGSDVVV-TTHYPELKAFAYDRPETINASMEFDQKTLRPTYRLLLGIPGQSNGIAIAKRL 498
Query: 581 GLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTR 640
G+ ++ A+ L S ++N++I E+ +E +AR R+ +L T+
Sbjct: 499 GIGQDIIAEAQSLVSDDSQDLNKMIGEL-------VEQRKQAR-----ERSEKLEVLLTK 546
Query: 641 RKILEHCASQRFRKVQKISDA-AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSAS 699
K E + + + ++ + ARS K+ Q+ + +A ++H +QL +
Sbjct: 547 NKATEQELNDKLTRFEEQREKLYEDARS---KANHQVSQAKKKADQIIH-HLRQLEITQG 602
Query: 700 QSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 759
S+ ++ Q L + Q +P +SV+K KQ + + GD V
Sbjct: 603 GSVKENELIDAQGALNALHQ--------NPRLKHNSVLKKAKQKRDLHK------GDAVL 648
Query: 760 VSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V S+G++G E++ + GN KW
Sbjct: 649 VKSYGQRG----------ELLEKRGNHKW 667
>gi|320547501|ref|ZP_08041787.1| DNA mismatch repair protein MutS [Streptococcus equinus ATCC 9812]
gi|320447846|gb|EFW88603.1| DNA mismatch repair protein MutS [Streptococcus equinus ATCC 9812]
Length = 778
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 218/394 (55%), Gaps = 46/394 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +P+ D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LTNPIANDLHFLDELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I++ + SLVL+DE+GAGT+P EG +L +S+
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVDILAAADKDSLVLVDELGAGTDPQEGASLAISI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHLRLT-QVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL ++V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEVIVNEAERLTDS-DTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L HK + L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNLHHKAS--L 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
GD + V+++G++GT+I Q N KW
Sbjct: 631 GDDIIVTAYGQRGTLIN----------QTKNGKW 654
>gi|295706821|ref|YP_003599896.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
gi|294804480|gb|ADF41546.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
Length = 787
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 284/574 (49%), Gaps = 109/574 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SSSG IEP + V LN+ELQ+A+ + E +L+ALT ++ +E+ + + + +L
Sbjct: 218 SSSGATLFIEPQAIVTLNNELQEAKVKEKQEIERILIALTVQVAEVANELRQNVYLLGEL 277
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+ YS HE SK ++R + I L KA HPL+ Q
Sbjct: 278 DFMFAKGRYS---------------------HELKASKPKMNDRGY-IKLVKAKHPLIAQ 315
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
+D+ + + EL G++ T++
Sbjct: 316 ----------EDVVANDIEL-------------GDQYTSI-------------------- 332
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
VITGPNTGGKT+ LKT+GL +MA++GL I + + +++ F VFADIGDE
Sbjct: 333 ---------VITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDE 383
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +S+L+ E G+
Sbjct: 384 QSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILDQVYERGA 443
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++RLGL
Sbjct: 444 RV-VATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLS 502
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+ G+ + ++ +I +E + Q + EA ++ LHK L + +I
Sbjct: 503 AEVIERAKGYIGSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKLHKEL---QSQI 559
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLH 703
+E K K+ + A + AQ +AS+ K LR
Sbjct: 560 IEFN-----EKRDKLYEKA-------EEKAQATVKAASEE---AEKIISDLR-------- 596
Query: 704 CTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV--KRTELPNVGDLVHVS 761
K+ + H L + K A + ++ K+ P V K+ GD V V
Sbjct: 597 --KMSQKNHALVKEHELIEARKRLEDAVPT---LEKSKKKPAVPKKQERTLQAGDEVKVL 651
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
S+G+KGT+++ S E VQ+G MK +K D+
Sbjct: 652 SWGQKGTLVE-RVSNNEWQVQMGIMKMKVKEKDL 684
>gi|90399000|emb|CAJ86270.1| H0901F07.7 [Oryza sativa Indica Group]
Length = 889
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 200 VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
V+ R+C+ A L G++LSSSG G+ +EP A+ LN+ ++ + +AE
Sbjct: 258 VTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNN-MEVKLSGDERAE 316
Query: 256 EDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
E +L L D + +I ++ I++LD+ AR +Y+L P F +D L
Sbjct: 317 ELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVRP-AFTDRDSDTQL- 374
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+ E ++++ HPLLL+Q +++
Sbjct: 375 ---------NPNSECSVFIEGIQHPLLLEQSLSMVKES---------------------- 403
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
T + ++ L P+P+D+ + TR++VI+GPNTGGKT +KT+GLA +
Sbjct: 404 ------TGVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASL 457
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+ ++ I+ + SLVL
Sbjct: 458 MSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVL 517
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
+DEIG+GT+P +G AL S+L+ A S L I TTH+ +L LK +D FENA MEF
Sbjct: 518 IDEIGSGTDPSDGVALSTSILKYLA-SRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCL 576
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
L+PTY+ILWG G S+A++IA+ +G V+ A++
Sbjct: 577 ETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQE 614
>gi|256846546|ref|ZP_05552003.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
gi|256718315|gb|EEU31871.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
Length = 778
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 227/420 (54%), Gaps = 45/420 (10%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHE--ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
+ E AR L+ +I A Q ++K + I +S ++ +
Sbjct: 532 EMRERFAR-------------LQEEARIDRERAKQETLIIEKQKN--EIIKSAYEEAEKM 576
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ ++A +LV K ++ ++ KN ++L++ ++ VE
Sbjct: 577 MNEMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE-------- 624
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VVK IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 625 VVKKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---RTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL +TE
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRITEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|418962477|ref|ZP_13514339.1| MutS2 family protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383345613|gb|EID23720.1| MutS2 family protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 776
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 216/386 (55%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L +AHP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVAHPLIENAVANDLYFAADLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
E ++V FD +FADIGDEQS+ QSLSTFS H+ I +I+ Q+ +LVLLDE+GAGT+P
Sbjct: 357 DEGSQVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQADENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK + +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETEGVQNASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL VV++A++L S ++N VI ER + Q LE +R
Sbjct: 476 QGVPGRSNAFEIARRLGLSVRVVKDAQELTDTDS-DVNRVI---ERLEEQTLE----SRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R L+ ++ R+ + + A + AQ++ A
Sbjct: 528 RLDNIREVEQENLKFNRA-LKKLYNEFNREKETELNKARL-------EAQEIIDVALTES 579
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
+ K +LH K ++ + Q + P T S K +KQ+
Sbjct: 580 DTILK-----------NLHAKSSLKPHEIIEAKSQLKKL----APETVDLSQNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G +GT++
Sbjct: 625 KARK---PKVGDDILVISYGHRGTLV 647
>gi|422871703|ref|ZP_16918196.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1087]
gi|328945871|gb|EGG40022.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1087]
Length = 777
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFRPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVSHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|422859283|ref|ZP_16905933.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1057]
gi|327459063|gb|EGF05411.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1057]
Length = 777
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEDQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|19704902|ref|NP_602397.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|81763629|sp|Q8RIK8.1|MUTS2_FUSNN RecName: Full=MutS2 protein
gi|19712795|gb|AAL93696.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 778
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP P+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNKEILSLEKARHPFIDKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQSGILKLEVPFDEI 678
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 24/149 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSL 294
++ + D+I + ++ LD++NA++ Y++
Sbjct: 256 LRNNKDDILIIGEKVMYLDILNAKSIYAV 284
>gi|422864049|ref|ZP_16910678.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK408]
gi|327472872|gb|EGF18299.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK408]
Length = 777
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|222629785|gb|EEE61917.1| hypothetical protein OsJ_16650 [Oryza sativa Japonica Group]
Length = 841
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 200 VSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAE 255
V+ R+C+ A L G++LSSSG G+ +EP A+ LN+ ++ + +AE
Sbjct: 183 VTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNN-MEVKLSGDERAE 241
Query: 256 EDVLLALTEKMQVDLD-EIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLT 314
E +L L D + +I ++ I++LD+ AR +Y+L P F +D L
Sbjct: 242 ELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVRP-AFTDRDSDTQL- 299
Query: 315 HEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAA 374
+ E ++++ HPLLL+Q +++
Sbjct: 300 ---------NPNSECSVFIEGIQHPLLLEQSLSMVKES---------------------- 328
Query: 375 RKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
T + ++ L P+P+D+ + TR++VI+GPNTGGKT +KT+GLA +
Sbjct: 329 ------TRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASL 382
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
M+K+G+ + ++PWFD V ADIGD QSL SLSTFSGH+ ++ I+ + SLVL
Sbjct: 383 MSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVL 442
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
+DEIG+GT+P +G AL S+L+ A S L I TTH+ +L LK +D FENA MEF
Sbjct: 443 IDEIGSGTDPSDGVALSTSILKYLA-SRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCL 501
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQ 592
L+PTY+ILWG G S+A++IA+ +G V+ A++
Sbjct: 502 ETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQE 539
>gi|222529627|ref|YP_002573509.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
gi|254766186|sp|B9MK78.1|MUTS2_ANATD RecName: Full=MutS2 protein
gi|222456474|gb|ACM60736.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 787
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 216/397 (54%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + VL+ITGPNTGGKT+ LKTVGL ++ +SG+ I + E +++ F +FA
Sbjct: 314 VPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGD+QS+ QSLSTFS H+K I I + ++LVLLDEIGAGT+P EG AL ++L+
Sbjct: 374 DIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+E GS + IATTH+GELK D FENA EFD LKPTY++L G+PGRS+A+ I+
Sbjct: 434 SEKGSKV-IATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISS 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
LGL +V+ AR + +++ +I EME+ + + E++ A+ ++ L
Sbjct: 493 NLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELAQKLKHEAQALKAAYEE 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+++ +R RK A A+ +V S ++ R L A+ L+
Sbjct: 553 EKKRF--ETERERIRK-----KAINEAKEIVESSQYEIENLFKDLRKL----AENLKEKE 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
K + + ++ S QQ VK +S K + +G V
Sbjct: 602 VLKELEEKKREYERLIQSISQQ----------------VKQEAESKTKKTIQNLRLGQKV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+V SF +G V + SK + VQ+G MK + +DI
Sbjct: 646 YVRSFDAEGFVESLPDSKGNLTVQIGIMKINVNLSDI 682
>gi|423072092|ref|ZP_17060854.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
gi|361857227|gb|EHL09076.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
Length = 789
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 222/413 (53%), Gaps = 37/413 (8%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
++S ++ HP VP+ I + + +V+TGPNTGGKT+ LKT+GL MA+ GLHI
Sbjct: 300 EISLVQARHPLLTGKVVPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ ++V F +FADIGDEQS+ QSLSTFSGH+K I I+ ++ +SL+LLDE+GAGT
Sbjct: 360 PAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSLILLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG+AL M+++ E G+ + +ATTH+G LK Y+ ENA +EFD L+PTY+
Sbjct: 420 DPTEGSALAMAIIAELHERGARI-VATTHYGALKNFAYNTTRVENASVEFDSETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGLP V+ AR ++ ++I +E + +
Sbjct: 479 LLIGIPGKSNAFYIAGRLGLPEGVLDRARTFVTEREMQVADLIENLEDTQREI------- 531
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+L K R R+ +E + K QK+ D + L+ K+ Q +
Sbjct: 532 --------DLEKRRAREERQAIEKESLGLKEKSQKLEDD---YQELMAKARDQATEIVRE 580
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
AR + +L+ L + K+Q + Q + K+ + + ++
Sbjct: 581 ARREAERLIDELK------LALKEERKDQQAIEKTRQ--GIRKLSNKVGDQDTPLR---- 628
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P + +G +V+++ +KG V+K+ E+ VQ G +K + ++I
Sbjct: 629 TPHGVEPQEIKLGQMVYMTKLRQKGQVLKLPNDSGEVFVQAGVIKLNVPLSEI 681
>gi|340754472|ref|ZP_08691225.1| MutS2 protein [Fusobacterium sp. 2_1_31]
gi|229423979|gb|EEO39026.1| MutS2 protein [Fusobacterium sp. 2_1_31]
Length = 778
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 226/418 (54%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S +V +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREVLSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I++ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + ++E ++ I ++ ++ + +
Sbjct: 532 EMRERFARLEEEARLDRERAKQETLVIEKQKNE-------------IIKAAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFEEI 678
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFDEPSLANAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KFD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
++ + D+I + + + LD++NA++ Y++ P +
Sbjct: 256 LRNNRDDILAIGDKALYLDILNAKSIYAVDNKCEIPTV 293
>gi|422824868|ref|ZP_16873053.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK405]
gi|422856979|ref|ZP_16903633.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1]
gi|422864470|ref|ZP_16911095.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1058]
gi|324992148|gb|EGC24070.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK405]
gi|327459465|gb|EGF05811.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1]
gi|327490664|gb|EGF22445.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1058]
Length = 777
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQKIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|89893029|ref|YP_516516.1| hypothetical protein DSY0283 [Desulfitobacterium hafniense Y51]
gi|219666299|ref|YP_002456734.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
gi|89332477|dbj|BAE82072.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536559|gb|ACL18298.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
Length = 789
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 222/413 (53%), Gaps = 37/413 (8%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
++S ++ HP VP+ I + + +V+TGPNTGGKT+ LKT+GL MA+ GLHI
Sbjct: 300 EISLVQARHPLLTGKVVPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ ++V F +FADIGDEQS+ QSLSTFSGH+K I I+ ++ +SL+LLDE+GAGT
Sbjct: 360 PAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSLILLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG+AL M+++ E G+ + +ATTH+G LK Y+ ENA +EFD L+PTY+
Sbjct: 420 DPTEGSALAMAIIAELHERGARI-VATTHYGALKNFAYNTTRVENASVEFDSETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGLP V+ AR ++ ++I +E + +
Sbjct: 479 LLIGIPGKSNAFYIAGRLGLPEGVLDRARTFVTEREMQVADLIENLEDTQREI------- 531
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+L K R R+ +E + K QK+ D + L+ K+ Q +
Sbjct: 532 --------DLEKRRAREERQAIEKESLGLKEKSQKLEDD---YQELMAKARDQATEIVRE 580
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
AR + +L+ L + K+Q + Q + K+ + + ++
Sbjct: 581 ARREAERLIDELK------LALKEERKDQQAIEKTRQ--GIRKLSNKVGDQDTPLR---- 628
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+P + +G +V+++ +KG V+K+ E+ VQ G +K + ++I
Sbjct: 629 TPHGVEPQEIKLGQMVYMTKLRQKGQVLKLPNDSGEVFVQAGVIKLNVPLSEI 681
>gi|422849469|ref|ZP_16896145.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
gi|325689443|gb|EGD31448.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
Length = 777
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTDTDS-DVNRII---ERLEEQKL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V + S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIVD-------LALS 577
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
++ S++ K LH K ++ + Q + P T S K +K
Sbjct: 578 ESESILKK------------LHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|256965209|ref|ZP_05569380.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|307273312|ref|ZP_07554558.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
gi|256955705|gb|EEU72337.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|306510297|gb|EFM79321.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
Length = 788
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSRLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|422736468|ref|ZP_16792731.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
gi|315166623|gb|EFU10640.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
Length = 788
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSRLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|384549903|ref|YP_005739155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302332752|gb|ADL22945.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 782
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 218/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ VK IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------VKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|77413675|ref|ZP_00789859.1| MutS2 family protein [Streptococcus agalactiae 515]
gi|77160275|gb|EAO71402.1| MutS2 family protein [Streptococcus agalactiae 515]
Length = 782
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 218/379 (57%), Gaps = 41/379 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 310 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 430 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V+ A+Q+ + S ++N +I E+ + Q LE H + + NL
Sbjct: 489 EIASRLGLAPFIVKQAKQMTDSDS-DVNRII---EQLEAQTLETRRRLDHIKEIEQENLK 544
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR--- 690
N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 545 FN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKLND 591
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 592 KSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKAAR 632
Query: 751 LPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 633 APRIGDDIIVTSYGQRGTL 651
>gi|422701663|ref|ZP_16759503.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
gi|315170093|gb|EFU14110.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
Length = 788
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLNPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|456014379|gb|EMF47994.1| Recombination inhibitory protein MutS2 [Planococcus halocryophilus
Or1]
Length = 786
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 299/618 (48%), Gaps = 114/618 (18%)
Query: 184 MDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAV 238
++ L+R +N + + V+ + R I + S G ++ SSSG IEP S V
Sbjct: 174 LESLVRGKNASKMLSDSIVTIRNDRFVIPVKQEYRSHYGGIVHDQSSSGQTLFIEPDSVV 233
Query: 239 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 298
N+E+++ + + + +LL L+ ++Q E+ +++ + ++D++ A+A Y + G
Sbjct: 234 QANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKG 293
Query: 299 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 358
T P + E I L KA HP++ +
Sbjct: 294 TKPTM----------------------NTEGYINLKKARHPMIPRDE------------- 318
Query: 359 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 418
+ P++++ R+ +VITGPN
Sbjct: 319 ------------------------VVPNDIE---------------FGREITAIVITGPN 339
Query: 419 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 478
TGGKT+ LKTVGLA +MA+SGL + + + +++ FD +FADIGDEQS+ QSLSTFS H+
Sbjct: 340 TGGKTVTLKTVGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMV 399
Query: 479 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 538
I +I+++ SLV+ DE+GAGT+P EG AL +SLL+ G+ + IATTH+ ELK
Sbjct: 400 NIVDILTKFDENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARV-IATTHYPELKAY 458
Query: 539 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 598
++ NA +EFD L PTY++L GVPGRS+A I++RLGLP ++ +A+ G S
Sbjct: 459 GFNRPGVANASVEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFTGTDS 518
Query: 599 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 658
++ +I +E+ + + + L S L K L + LE Q+ ++ +K
Sbjct: 519 KAVDSMIASLEKSRREAERDAERTQEVLSESEQLKKELAQQ----LEEYEKQKEQREEK- 573
Query: 659 SDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQSLHCTKVGKNQHVLTSN 717
A AR +V + + ++A S++ + R QL +S H K + L
Sbjct: 574 --AKEKARKIVDE-------ARAEAESVISELRKMQLNQGSSVKEHELIYAKKR--LEDA 622
Query: 718 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 777
Q + K A+ + PN D V V SFG+KGT+++ + SK
Sbjct: 623 MPQNRILKKAAKDNAAKPL--------------QPN--DEVKVISFGQKGTLVE-KVSKN 665
Query: 778 EIVVQVGNMKWIMKFTDI 795
E +VQ+G +K + +D+
Sbjct: 666 EWIVQIGILKMKLPESDL 683
>gi|417901588|ref|ZP_12545464.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
gi|341845427|gb|EGS86629.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
Length = 782
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + K+ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKKKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|312622156|ref|YP_004023769.1| muts2 family protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202623|gb|ADQ45950.1| MutS2 family protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 787
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 218/397 (54%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + VL+ITGPNTGGKT+ LKTVGL ++ +SG+ I + E +++ F +FA
Sbjct: 314 VPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGD+QS+ QSLSTFS H+K I I + ++LVLLDEIGAGT+P EG AL ++L+
Sbjct: 374 DIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+E GS + IATTH+GELK + FENA EFD LKPTY++L G+PGRS+A+ I+
Sbjct: 434 SEKGSKV-IATTHYGELKIFAQQENRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISS 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
LGL +V+ AR + +++ +I EME+ K + E++ A+ ++ L
Sbjct: 493 NLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKKKEAEENLELAQKLKHEAQALKAAYEE 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+++ +R RK A A+ +V +S ++ R L A+ L+
Sbjct: 553 EKKRF--ETERERIRK-----KAINEAKEIVERSQYEIENLFKDLRKL----AENLKEKE 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
K + + ++ S QQ A S K I Q+ R+ G V
Sbjct: 602 VLKELEEKKREYERLIQSISQQ-------EKQEAESKTKKTI-QNLRL--------GQKV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+V SF +G V + SK + VQ+G MK + +DI
Sbjct: 646 YVRSFDAEGFVESLPDSKGNLTVQIGIMKINVNLSDI 682
>gi|25011803|ref|NP_736198.1| MutS2 family protein [Streptococcus agalactiae NEM316]
gi|81744484|sp|Q8E3J5.1|MUTS2_STRA3 RecName: Full=MutS2 protein
gi|24413344|emb|CAD47423.1| Unknown [Streptococcus agalactiae NEM316]
Length = 779
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 218/379 (57%), Gaps = 41/379 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 633
IA RLGL +V+ A+Q+ + S ++N +I E+ + Q LE H + + NL
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRII---EQLEAQTLETRRRLDHIKEIEQENLK 541
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR--- 690
N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 542 FN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKLND 588
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 589 KSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKAAR 629
Query: 751 LPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 630 APRIGDDIIVTSYGQRGTL 648
>gi|452995728|emb|CCQ92597.1| MutS2 protein [Clostridium ultunense Esp]
Length = 792
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 226/401 (56%), Gaps = 40/401 (9%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
LE VPIDI++ + LVITGPNTGGKT+ LKTVGL +MA+SG+HI + +++
Sbjct: 313 LEPKEVVPIDIYLGKGFNTLVITGPNTGGKTVTLKTVGLLTLMAQSGIHIPADFNSQIGV 372
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
FD +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+L DE+GAGT+P EG AL M
Sbjct: 373 FDQIFADIGDEQSIEQSLSTFSSHMTNIVDILDKVEQNSLILFDELGAGTDPTEGAALAM 432
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ + ++ TIATTH+ +LK + D NA +EFD L PTY++L GVPG+S+
Sbjct: 433 SILDHLLKL-NIRTIATTHYSQLKIYALTTDRVRNASVEFDVETLSPTYRLLIGVPGKSN 491
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I++RLGL G ++ A+ L + E +V+ +++ + E+ EA L
Sbjct: 492 AFEISKRLGLQGYIIDYAKTLVSKENVEFEDVLQAIDKDRKIIEENRFEAER-------L 544
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
++ + + ++ + + + + I+ A ARS++ + ++ ++ R +
Sbjct: 545 KSDVEKLKEELTKEKEKTKAEREKIITRAKEEARSILRAAKEESDHIVTELRHI------ 598
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQ---TTVDKVEHPATASSSVVKDIKQSPRVKRT 749
T++ K+++ Q+ +++D+VE SS+ KD+ VK
Sbjct: 599 -----------STEIEKDRNKKIQEAQEKLKSSLDQVE------SSLSKDV---LNVKSK 638
Query: 750 ELP---NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
++P +G++V V S + G V+++ + VQVG MK
Sbjct: 639 KIPKNLKIGEMVEVLSLNQIGNVLELPDENGNVQVQVGIMK 679
>gi|294784135|ref|ZP_06749436.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
gi|294488205|gb|EFG35550.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
Length = 778
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 45/417 (10%)
Query: 389 QVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA SG+
Sbjct: 297 EILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGI 356
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE+G+
Sbjct: 357 PIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGS 416
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L PT
Sbjct: 417 GTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPT 475
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+ +
Sbjct: 476 YRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELDEMR 534
Query: 621 E--ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
E AR L+ +I A Q ++K + I +S ++ + +
Sbjct: 535 ERFAR-------------LQEEARIDRERAKQETLIIEKQKN--EIIKSAYEEAEKMMNE 579
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
++A +LV K ++ ++ KN ++L++ ++ VE VVK
Sbjct: 580 MRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VVK 627
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 628 KIKTKVNFK------VGDRVFVKSINQFANILKINTSKESTSVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|386728823|ref|YP_006195206.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
71193]
gi|387602416|ref|YP_005733937.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478481|ref|YP_006709911.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
gi|418309746|ref|ZP_12921297.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|418978614|ref|ZP_13526414.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|283470354|emb|CAQ49565.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237869|gb|EHM78708.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|379993438|gb|EIA14884.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|384230116|gb|AFH69363.1| MutS [Staphylococcus aureus subsp. aureus 71193]
gi|404439970|gb|AFR73163.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
Length = 782
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 219/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKRADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|22537858|ref|NP_688709.1| MutS2 family protein [Streptococcus agalactiae 2603V/R]
gi|76787272|ref|YP_330327.1| MutS2 family protein [Streptococcus agalactiae A909]
gi|406710098|ref|YP_006764824.1| MutS2 family protein [Streptococcus agalactiae GD201008-001]
gi|421147964|ref|ZP_15607636.1| MutS2 family protein [Streptococcus agalactiae GB00112]
gi|424048838|ref|ZP_17786389.1| MutS2 family protein [Streptococcus agalactiae ZQ0910]
gi|81744331|sp|Q8DXX6.1|MUTS2_STRA5 RecName: Full=MutS2 protein
gi|123601324|sp|Q3JZH6.1|MUTS2_STRA1 RecName: Full=MutS2 protein
gi|22534753|gb|AAN00582.1|AE014269_26 MutS2 family protein [Streptococcus agalactiae 2603V/R]
gi|76562329|gb|ABA44913.1| MutS2 family protein [Streptococcus agalactiae A909]
gi|389649607|gb|EIM71083.1| MutS2 family protein [Streptococcus agalactiae ZQ0910]
gi|401685302|gb|EJS81310.1| MutS2 family protein [Streptococcus agalactiae GB00112]
gi|406650983|gb|AFS46384.1| MutS2 family protein [Streptococcus agalactiae GD201008-001]
Length = 779
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|256847954|ref|ZP_05553398.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715014|gb|EEU29991.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
Length = 791
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 218/407 (53%), Gaps = 51/407 (12%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + R +VITGPNTGGKTI LKT+GL +M +SG I ++E +++ FD+VFA
Sbjct: 317 VPNDIQLGDQYRTIVITGPNTGGKTITLKTLGLIQLMGQSGFFIPANEGSQITIFDNVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQSL Q+LSTFSGH++ + I+ Q T +SLVLLDE+GAGT+P EG AL M++L
Sbjct: 377 DIGDEQSLEQNLSTFSGHMENVKRILEQITERSLVLLDELGAGTDPKEGAALAMAILNQI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ GS + I TTH+ ELK + NA MEFD +PTY+++ GVPG+S+ I IA+
Sbjct: 437 QQVGSEVVI-TTHYPELKVYGFERPQTINASMEFDVDTFQPTYRLMLGVPGQSNGIAIAQ 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK---- 634
RLGL V+ +A+ L S ++N +I E+ + Q E+ + R +++ N K
Sbjct: 496 RLGLASTVINDAQSLVKDDSQKLNAMIGELVEQRKQAREN--QERLAKLVAENQQKATDL 553
Query: 635 ----NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS--LVH 688
N +R L A R + +++DA A ++H Q +Q + L+
Sbjct: 554 EQKLNRFNEQRDDLYEKA--RMQANHQVADAKRKADRIIHHLRQMEVQRGTQIKENELID 611
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
+ Q +LH P + V++ KQ +K
Sbjct: 612 AQGQ------LNALH-----------------------RDPRLKRNKVLQRAKQKHNLK- 641
Query: 749 TELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+GD V V S+G+ GT+I + K + VQ+G +K + D+
Sbjct: 642 -----IGDAVKVKSYGQVGTLI-AKRGKHQWEVQLGILKMAIDERDL 682
>gi|257085338|ref|ZP_05579699.1| MutS 2 protein [Enterococcus faecalis Fly1]
gi|256993368|gb|EEU80670.1| MutS 2 protein [Enterococcus faecalis Fly1]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|77412144|ref|ZP_00788467.1| MutS2 family protein [Streptococcus agalactiae CJB111]
gi|77161804|gb|EAO72792.1| MutS2 family protein [Streptococcus agalactiae CJB111]
Length = 779
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|76798411|ref|ZP_00780652.1| MutS2 family protein [Streptococcus agalactiae 18RS21]
gi|77405981|ref|ZP_00783060.1| MutS2 family protein [Streptococcus agalactiae H36B]
gi|77409454|ref|ZP_00786148.1| MutS2 family protein [Streptococcus agalactiae COH1]
gi|76586243|gb|EAO62760.1| MutS2 family protein [Streptococcus agalactiae 18RS21]
gi|77171946|gb|EAO75121.1| MutS2 family protein [Streptococcus agalactiae COH1]
gi|77175433|gb|EAO78223.1| MutS2 family protein [Streptococcus agalactiae H36B]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 310 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 430 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 489 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 542
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 543 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 589
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 590 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 630
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 631 ARAPRIGDDIIVTSYGQRGTL 651
>gi|347530511|ref|YP_004837274.1| DNA mismatch repair protein [Roseburia hominis A2-183]
gi|345500659|gb|AEN95342.1| DNA mismatch repair protein [Roseburia hominis A2-183]
Length = 795
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 210/405 (51%), Gaps = 43/405 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + R+L++TGPNTGGKT+ LKTVGL +M +SGLHI +SE +++ FD VFA
Sbjct: 318 VPIDVRLGEDFRLLIVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPASERSELGIFDEVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ Q +SLVL DE+ AGT+P EG AL +S+L
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIIRILEQVNDRSLVLFDELCAGTDPTEGAALAISILSKL 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK S ENAC EFD L PTY++L G+PG+S+A I+E
Sbjct: 438 HLYGARI-MATTHYSELKVYALSTPGVENACCEFDVATLSPTYRLLIGIPGKSNAFAISE 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP ++ +A+ + + ++I ++E+ ++ E + +L + L +
Sbjct: 497 KLGLPSDLITDAKGRISKSEGDFEDLIADLEKSRSTIEREQLEINQYKAEIESLKEKLEQ 556
Query: 639 -------TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+R KIL Q + +++ D A +K + P S + K
Sbjct: 557 KQERLDSSRNKILREANEQAYNILKEAKDVADETIRNFNKYGKAGAPV-----SEMEKER 611
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
+LR ++ K V N P+ R
Sbjct: 612 TKLRGKMDKAAQKMSEQKKASVPNHNV-------------------------PKKLR--- 643
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+GD V V S KGTV + ++ ++ VQ+G ++ ++ D++
Sbjct: 644 --IGDSVKVISMNLKGTVHSLPNARGDLYVQMGILRSLVNINDLI 686
>gi|255658182|ref|ZP_05403591.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
gi|260849490|gb|EEX69497.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
Length = 794
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 216/393 (54%), Gaps = 40/393 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI I R+L+ITGPNTGGKT+ +KT+G V++A+SG ++ ++ + + +++A
Sbjct: 314 VPIDIRIGEDYRMLLITGPNTGGKTVSMKTLGTMVLLAQSGCYLPTAPDPVIAVYPNIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ + LVLLDE+GAGT+P EG AL M++LE
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTHIVRILQEVEEDDLVLLDELGAGTDPEEGAALAMAILEKL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + TIATTH+ ELKT YS + ENAC+EFD L+PTY++L G+PG S+A I+
Sbjct: 434 LQL-RVTTIATTHYSELKTFAYSREGIENACVEFDVKTLRPTYRLLIGMPGASNAFAISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRN-----LH 633
RLGL ++ A+QL A A+ VI E+E K ++E R+ +L R L
Sbjct: 493 RLGLSESLILRAQQLVKADHAQFEHVINELENEKM-----MYEQRNADILERQQRVTELE 547
Query: 634 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ 693
+ RT+ + L + RK ++ S AA+ R +S + Q KR QQ
Sbjct: 548 AKVARTKEE-LSKKKGELIRKAREQS--AAMVRRTRRESEAIIKELKEQFDDQGIKRRQQ 604
Query: 694 LRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN 753
A L+ F+++ + + +K IK
Sbjct: 605 AIQDARAKLN------------EAFEKSRPGIMAQKGVGKAVSLKSIKP----------- 641
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNM 786
GD+V+V +KGTV++V+ +E+ VQ+G++
Sbjct: 642 -GDIVYVKKLDQKGTVLEVQ--GKELTVQIGSL 671
>gi|293509911|ref|ZP_06668620.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
gi|291467361|gb|EFF09878.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVALKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|422881466|ref|ZP_16927922.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK355]
gi|332364404|gb|EGJ42178.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK355]
Length = 777
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 THPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVGHAQEQTNTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|29375971|ref|NP_815125.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227518669|ref|ZP_03948718.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227553200|ref|ZP_03983249.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|422715235|ref|ZP_16771958.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|422716036|ref|ZP_16772752.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|424676844|ref|ZP_18113715.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|424681338|ref|ZP_18118125.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|424683526|ref|ZP_18120276.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|424686569|ref|ZP_18123237.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|424690157|ref|ZP_18126692.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|424695180|ref|ZP_18131563.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|424697010|ref|ZP_18133351.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|424699605|ref|ZP_18135816.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|424703382|ref|ZP_18139516.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|424706073|ref|ZP_18142086.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|424717217|ref|ZP_18146515.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|424720798|ref|ZP_18149899.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|424724349|ref|ZP_18153298.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|424733935|ref|ZP_18162490.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|424743762|ref|ZP_18172067.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|424749463|ref|ZP_18177566.1| MutS2 family protein [Enterococcus faecalis ERV93]
gi|81722394|sp|Q835H3.1|MUTS2_ENTFA RecName: Full=MutS2 protein
gi|29343433|gb|AAO81195.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227073849|gb|EEI11812.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227177673|gb|EEI58645.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|315575541|gb|EFU87732.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|315580018|gb|EFU92209.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|402351045|gb|EJU85937.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|402356464|gb|EJU91198.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|402364524|gb|EJU98959.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|402364844|gb|EJU99275.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|402367423|gb|EJV01764.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|402368722|gb|EJV03029.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|402375534|gb|EJV09514.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|402377339|gb|EJV11250.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|402385387|gb|EJV18927.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|402386565|gb|EJV20071.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|402388716|gb|EJV22144.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|402390945|gb|EJV24265.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|402393269|gb|EJV26499.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|402395332|gb|EJV28441.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|402399891|gb|EJV32745.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|402407714|gb|EJV40219.1| MutS2 family protein [Enterococcus faecalis ERV93]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|49483307|ref|YP_040531.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|282903692|ref|ZP_06311580.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|282905461|ref|ZP_06313316.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908435|ref|ZP_06316266.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283957887|ref|ZP_06375338.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427631|ref|ZP_06820263.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591415|ref|ZP_06950053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|415684425|ref|ZP_11449554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|418566423|ref|ZP_13130804.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|418581975|ref|ZP_13146053.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595208|ref|ZP_13158829.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|418602382|ref|ZP_13165788.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|418897682|ref|ZP_13451752.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900552|ref|ZP_13454609.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908854|ref|ZP_13462859.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418916937|ref|ZP_13470896.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922724|ref|ZP_13476641.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982055|ref|ZP_13529763.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985723|ref|ZP_13533409.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749238|sp|Q6GHU1.1|MUTS2_STAAR RecName: Full=MutS2 protein
gi|49241436|emb|CAG40120.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|282328100|gb|EFB58382.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330753|gb|EFB60267.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595310|gb|EFC00274.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|283790036|gb|EFC28853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295127989|gb|EFG57623.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576301|gb|EFH95017.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|315193814|gb|EFU24209.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|371970636|gb|EHO88053.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|374396082|gb|EHQ67333.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|374402075|gb|EHQ73118.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|377703020|gb|EHT27336.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704336|gb|EHT28645.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377705541|gb|EHT29845.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710385|gb|EHT34623.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377736047|gb|EHT60077.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750111|gb|EHT74049.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377754850|gb|EHT78756.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377760717|gb|EHT84593.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|410595086|ref|YP_006951813.1| MutS2 protein [Streptococcus agalactiae SA20-06]
gi|410518725|gb|AFV72869.1| MutS2 protein [Streptococcus agalactiae SA20-06]
Length = 779
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|421531840|ref|ZP_15978217.1| MutS2 family protein [Streptococcus agalactiae STIR-CD-17]
gi|403642941|gb|EJZ03741.1| MutS2 family protein [Streptococcus agalactiae STIR-CD-17]
Length = 779
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|257416014|ref|ZP_05593008.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|300860265|ref|ZP_07106352.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|384513156|ref|YP_005708249.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|422733668|ref|ZP_16789970.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|422738643|ref|ZP_16793838.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|428766910|ref|YP_007153021.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|430360426|ref|ZP_19426273.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|430368259|ref|ZP_19428131.1| MutS 2 protein [Enterococcus faecalis M7]
gi|257157842|gb|EEU87802.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|295112922|emb|CBL31559.1| MutS2 family protein [Enterococcus sp. 7L76]
gi|300849304|gb|EFK77054.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|315145717|gb|EFT89733.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|315160196|gb|EFU04213.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|327535045|gb|AEA93879.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|427185083|emb|CCO72307.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|429512902|gb|ELA02497.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|429516421|gb|ELA05913.1| MutS 2 protein [Enterococcus faecalis M7]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|417006101|ref|ZP_11944671.1| MutS2 family protein [Streptococcus agalactiae FSL S3-026]
gi|341576282|gb|EGS26693.1| MutS2 family protein [Streptococcus agalactiae FSL S3-026]
Length = 779
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|256618984|ref|ZP_05475830.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
gi|256598511|gb|EEU17687.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|373116161|ref|ZP_09530317.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669625|gb|EHO34724.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
Length = 789
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 218/450 (48%), Gaps = 83/450 (18%)
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
+SSSG IEP+ V N+EL++ +A K E +L L+ + D+I + + +I
Sbjct: 215 VSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDLLIL 274
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LDV+ ARA + +P I E +YL KA HPL
Sbjct: 275 LDVIFARAKLAYRMRACAPRIV-----------------------ERGLYLRKARHPL-- 309
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
L P V D
Sbjct: 310 ----------------------------------------LDPD----------RAVAND 319
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
+ + LVITGPNTGGKT+ +KT+GL +MA+ GLHI S+ ++V F V AD+GD
Sbjct: 320 LMLGEDFDTLVITGPNTGGKTVTIKTIGLLTLMAQCGLHIPVSDDSRVKVFRRVLADVGD 379
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS++QSLSTFS H+ I I+ ++ ++L+L DE+GAGT+P+EG AL +++E+ E G
Sbjct: 380 EQSIAQSLSTFSSHMVNIVGILGEADDETLILFDELGAGTDPIEGAALAAAIIESAREMG 439
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+L+ ATTH+ ELK + ENA EF+ L PTY++L G+PG+S+A I+ERLGL
Sbjct: 440 ALVA-ATTHYAELKVYAMTTPGVENASCEFNVDSLAPTYRLLIGIPGKSNAFAISERLGL 498
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
P ++Q A+A I+ + E TQ E E + L + + T +
Sbjct: 499 PKSIIQK-------AAARIDAENVRFEDVLTQLDEQRQEMEREKEAAARLRREMEETAKA 551
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKS 672
E+ A + + + A A AR+++ ++
Sbjct: 552 SREYKAKMEAERAKAVEKAQAEARAILDEA 581
>gi|302824584|ref|XP_002993934.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
gi|300138206|gb|EFJ04981.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
Length = 825
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 208/389 (53%), Gaps = 67/389 (17%)
Query: 198 LEVSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTK 253
+ +++ RLC+ A L G++L SS G+ + EP A+ LN+ Q A+
Sbjct: 195 MTITTRRARLCVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERA 254
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
E + L ++ I + LN I+ LD+ ARA ++ G P F
Sbjct: 255 EEVAICRRLASRVAASAASILEQLNAIMLLDLACARAKHAKWLGAVKPAFF--------- 305
Query: 314 THEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNA 373
S SE + I + + HPLLL+ A
Sbjct: 306 --------ESKSESKGVI-IEEIRHPLLLE----------------------------TA 328
Query: 374 ARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAV 433
KG N PVPIDI + ++++I+GPNTGGKT+ LKT+G+A
Sbjct: 329 LEKGLDRDNF--------------PVPIDIKVRDGVKIVIISGPNTGGKTVALKTLGIAS 374
Query: 434 MMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLV 493
+MAK+GL++ +S ++PWFD +FAD+GD QSL Q+LSTFSGH++++ I S QSLV
Sbjct: 375 IMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTFSGHMRRLCKITEASGPQSLV 434
Query: 494 LLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK-YSNDF-FENACME 551
L+DEIG GT+P EG++L ++L+ FA++ L I TTH LKTL + D FENA +E
Sbjct: 435 LIDEIGGGTDPAEGSSLATAVLKYFAKTVH-LCIVTTHSASLKTLPIHDQDLPFENASVE 493
Query: 552 FDEVKLKPTYKILWGVPGRSSAINIAERL 580
FD L+PTY++LWG+PG+S+A+NIA+ L
Sbjct: 494 FDLETLRPTYRVLWGLPGQSNAVNIAKSL 522
>gi|257425195|ref|ZP_05601621.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257427858|ref|ZP_05604256.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257430493|ref|ZP_05606875.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433255|ref|ZP_05609613.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436094|ref|ZP_05612141.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282910719|ref|ZP_06318522.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913919|ref|ZP_06321706.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282918842|ref|ZP_06326577.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282923964|ref|ZP_06331640.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|293526498|ref|ZP_06671183.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|417889008|ref|ZP_12533107.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
gi|257272171|gb|EEV04303.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257274699|gb|EEV06186.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278621|gb|EEV09240.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281348|gb|EEV11485.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257284376|gb|EEV14496.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313936|gb|EFB44328.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|282316652|gb|EFB47026.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282321987|gb|EFB52311.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282325324|gb|EFB55633.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|290920570|gb|EFD97633.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|341853076|gb|EGS93958.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|255975938|ref|ZP_05426524.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|307278476|ref|ZP_07559550.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
gi|255968810|gb|EET99432.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|306504819|gb|EFM74015.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|422685288|ref|ZP_16743509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
gi|315029974|gb|EFT41906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|422728993|ref|ZP_16785399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
gi|315150623|gb|EFT94639.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|293500954|ref|ZP_06666805.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291095959|gb|EFE26220.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
Length = 780
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|256962011|ref|ZP_05566182.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|257089797|ref|ZP_05584158.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|293382380|ref|ZP_06628319.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|293389358|ref|ZP_06633816.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|312904147|ref|ZP_07763315.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|312907378|ref|ZP_07766369.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|312909995|ref|ZP_07768842.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|422689484|ref|ZP_16747596.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
gi|256952507|gb|EEU69139.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|256998609|gb|EEU85129.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|291080325|gb|EFE17689.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|291081245|gb|EFE18208.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|310626406|gb|EFQ09689.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|310632623|gb|EFQ15906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|311289268|gb|EFQ67824.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|315577532|gb|EFU89723.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|400289481|ref|ZP_10791510.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
gi|399922119|gb|EJN94934.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
Length = 776
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 181/302 (59%), Gaps = 14/302 (4%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L HPV D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ + +K F
Sbjct: 307 LPHPVANDLHFDTDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADQGSKTAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ + SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVDILQAADKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ TTH+ ELK +D+ ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMVTTHYPELKAYGIESDYVENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N +I ER ++Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVSEAENLTDTDS-DVNRII---ERLESQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L+ R + + + +++ A A A+ +V K+ L S S +SL K QL
Sbjct: 538 ENLKFNRAVKKLYNEFSHARDKELDKARAKAQEIVDKA---LAESDSILKSL--KAKSQL 592
Query: 695 RP 696
+P
Sbjct: 593 KP 594
>gi|256762410|ref|ZP_05502990.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|307277459|ref|ZP_07558551.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|422694899|ref|ZP_16752887.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
gi|256683661|gb|EEU23356.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|306505724|gb|EFM74902.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|315147901|gb|EFT91917.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|418925376|ref|ZP_13479278.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377744445|gb|EHT68422.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSSNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|365845197|ref|ZP_09385983.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
gi|364561374|gb|EHM39279.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
Length = 789
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 218/450 (48%), Gaps = 83/450 (18%)
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
+SSSG IEP+ V N+EL++ +A K E +L L+ + D+I + + +I
Sbjct: 215 VSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDLLIL 274
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LDV+ ARA + +P I E +YL KA HPL
Sbjct: 275 LDVIFARAKLAYRMRACAPRIV-----------------------ERGLYLRKARHPL-- 309
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
L P V D
Sbjct: 310 ----------------------------------------LDPD----------RAVAND 319
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
+ + LVITGPNTGGKT+ +KT+GL +MA+ GLHI S+ ++V F V AD+GD
Sbjct: 320 LMLGEDFDTLVITGPNTGGKTVTIKTIGLLTLMAQCGLHIPVSDDSRVKVFRRVLADVGD 379
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS++QSLSTFS H+ I I+ ++ ++L+L DE+GAGT+P+EG AL +++E+ E G
Sbjct: 380 EQSIAQSLSTFSSHMVNIVGILGEADGETLILFDELGAGTDPIEGAALAAAIIESAREMG 439
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+L+ ATTH+ ELK + ENA EF+ L PTY++L G+PG+S+A I+ERLGL
Sbjct: 440 ALVA-ATTHYAELKVYAMTTPGVENASCEFNVDSLAPTYRLLIGIPGKSNAFAISERLGL 498
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
P ++Q A+A I+ + E TQ E E + L + + T +
Sbjct: 499 PKSIIQK-------AAARIDAENVRFEDVLTQLDEQRQEMEREKEAAARLRREMEETAKA 551
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKS 672
E+ A + + + A A AR+++ ++
Sbjct: 552 SREYKAKMEAERAKAVEKAQAEARAILDEA 581
>gi|257082629|ref|ZP_05576990.1| MutS 2 protein [Enterococcus faecalis E1Sol]
gi|256990659|gb|EEU77961.1| MutS 2 protein [Enterococcus faecalis E1Sol]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|307288101|ref|ZP_07568111.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|422704386|ref|ZP_16762196.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
gi|306500837|gb|EFM70155.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|315164284|gb|EFU08301.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|422697088|ref|ZP_16755036.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
gi|315174484|gb|EFU18501.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|257086832|ref|ZP_05581193.1| MutS 2 protein [Enterococcus faecalis D6]
gi|422722610|ref|ZP_16779160.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|424673309|ref|ZP_18110252.1| MutS2 family protein [Enterococcus faecalis 599]
gi|256994862|gb|EEU82164.1| MutS 2 protein [Enterococcus faecalis D6]
gi|315027355|gb|EFT39287.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|402353119|gb|EJU87955.1| MutS2 family protein [Enterococcus faecalis 599]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|258423813|ref|ZP_05686699.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|418888936|ref|ZP_13443072.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846045|gb|EEV70073.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|377754446|gb|EHT78355.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
Length = 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
L+ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|229545911|ref|ZP_04434636.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256853039|ref|ZP_05558409.1| MutS2 protein [Enterococcus faecalis T8]
gi|307291392|ref|ZP_07571276.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
gi|229308979|gb|EEN74966.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256711498|gb|EEU26536.1| MutS2 protein [Enterococcus faecalis T8]
gi|306497623|gb|EFM67156.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
Length = 788
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K + K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|150389498|ref|YP_001319547.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
gi|229486330|sp|A6TNX0.1|MUTS2_ALKMQ RecName: Full=MutS2 protein
gi|149949360|gb|ABR47888.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
Length = 789
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 70/418 (16%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +++I + LVITGPNTGGKT+ LKT+GL MMA+SGLH+ + ++ FD +FA
Sbjct: 317 VPTNLWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I NI+ + TS SLVL DE+GAGT+P EG ALGM++L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E ++ T+ATTH+ ELK +N+ ENA +EFD L PTY++L GVPG+S+A I++
Sbjct: 437 REM-NVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP +VQ A+ RF +Q + HF L +N+ KN
Sbjct: 496 KLGLPDGLVQRAK------------------RFLSQ------DTIHFEDLLQNIEKN--- 528
Query: 639 TRRKILEHCASQRFR-KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 697
R +E ++R R + +K ++ + + L +R Q LR +
Sbjct: 529 RRESEIERQEAKRIRLEAEKFAEGY-----------------EDRKQRLEAQRDQILRDA 571
Query: 698 ASQSLHCTKVGK--NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN-- 753
++ K K ++H++ + K E A + ++D K K +L +
Sbjct: 572 KKEAYRLVKEAKMDSEHIIKGLREM----KFELEAKEMNKKMEDAKNQLTGKMNDLSDHH 627
Query: 754 ----------------VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V + S + G V+ K E+ VQ G MK M +++
Sbjct: 628 QQILNKKNKKPPKNLKPGDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISNL 685
>gi|418891775|ref|ZP_13445890.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377731107|gb|EHT55164.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
Length = 782
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|257419214|ref|ZP_05596208.1| MutS2 protein [Enterococcus faecalis T11]
gi|257161042|gb|EEU91002.1| MutS2 protein [Enterococcus faecalis T11]
Length = 788
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++RLG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|306832176|ref|ZP_07465330.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425615|gb|EFM28733.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 778
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LTNPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++ + + VQVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLVN-QGKNGKWEVQVGLIKMTLK 666
>gi|421527538|ref|ZP_15974138.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
gi|402256316|gb|EJU06798.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
Length = 778
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 224/418 (53%), Gaps = 41/418 (9%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEKKA-KSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 677
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K IK K GD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 627 KKIKTKVDFK------AGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNRDDILTIGEKVMYLDILNAKSIYA 283
>gi|421144927|ref|ZP_15604829.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488694|gb|EJG09547.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 778
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 45/417 (10%)
Query: 389 QVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA SG+
Sbjct: 297 EILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGI 356
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE+G+
Sbjct: 357 PIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGS 416
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L PT
Sbjct: 417 GTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPT 475
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+ +
Sbjct: 476 YRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELDEMR 534
Query: 621 E--ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
E AR L+ +I A Q ++K + I +S ++ + +
Sbjct: 535 ERFAR-------------LQEEARIDRERAKQETLIIEKQKN--EIIKSAYEEAEKMMNE 579
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
++A +LV K ++ ++ KN ++L++ ++ VE VVK
Sbjct: 580 MRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VVK 627
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 628 KIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---RTLNMNIKRKF-EELFEEPSLSNAFQERIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|94544645|gb|ABF34693.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10270]
Length = 818
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|339442882|ref|YP_004708887.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
gi|338902283|dbj|BAK47785.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
Length = 792
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 217/401 (54%), Gaps = 35/401 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + VLV+TGPNTGGKT+ LKTVGL +M ++G+HI +++ +++ FD VFA
Sbjct: 317 VPIDVSLGEDYHVLVVTGPNTGGKTVSLKTVGLLTLMGQAGMHIPAADRSQLAVFDEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ + +I Q SLVL DE+ AGT+P EG AL +S+L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHITNMVSIFRQMNPNSLVLFDELCAGTDPNEGAALAISILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + T+ATTH+ E+K S + ENA EFD L PTY+++ GVPG+S+A I++
Sbjct: 437 RSRG-IRTMATTHYSEMKIYALSTEGVENASCEFDVETLSPTYRLVTGVPGKSNAFAISQ 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ ARQ + +VI ++E+ + + + + + + L
Sbjct: 496 RLGLPESLIDGARQRLSQEAESFEDVIADLEQSRHTIEQEQQQIARYKTEIETMKEELAE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R K+ R+ + I++A ++ A Q+ +A+ + ++ R
Sbjct: 556 SRNKL-------EARRDKLIAEA--------NEEAAQIL---REAKEVADDTIRKFRKYG 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN---VG 755
L + K++ + + + V+ K+ +++ ++P +G
Sbjct: 598 KNGLDAAAMEKDREKVRKQLDKANRNAVQ-------------KKKQKIENHQVPKKLMIG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
D V V S KGTV + K +++VQ+G +++ + D+V
Sbjct: 645 DSVKVLSMNLKGTVHTLPNEKGDLMVQMGILRYKVNIRDLV 685
>gi|421078676|ref|ZP_15539628.1| MutS2 protein [Pelosinus fermentans JBW45]
gi|392523253|gb|EIW46427.1| MutS2 protein [Pelosinus fermentans JBW45]
Length = 787
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 152/223 (68%), Gaps = 2/223 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDIFI + L+ITGPNTGGKT+ LKT+GL +M ++GL+I +++ F+++FA
Sbjct: 315 VPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALMTQAGLYIPVQNGSEIAVFNNIFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ + I++Q +S+ LVL+DEIGAGT+P EG AL MS+LE
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNLVRILNQISSEDLVLIDEIGAGTDPDEGAALAMSILEHL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ TIATTH+ ELKT YS ENA +EFD L+PTY++L GVPG S+A I++
Sbjct: 435 LNIGA-KTIATTHYSELKTFAYSRQGIENASVEFDIQTLRPTYRLLIGVPGSSNAFAISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
RLGL +++ A Q AE V+ +E K + + +HE
Sbjct: 494 RLGLSDRIIEQASQFIDKDHAEFETVLNALEEQKIAY-DKLHE 535
>gi|422880185|ref|ZP_16926649.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1059]
gi|422930209|ref|ZP_16963148.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
29667]
gi|422930801|ref|ZP_16963732.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK340]
gi|332364761|gb|EGJ42530.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK1059]
gi|339614189|gb|EGQ18900.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
29667]
gi|339620777|gb|EGQ25345.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK340]
Length = 777
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 216/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
+L+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 LLADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLKQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|157693276|ref|YP_001487738.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pumilus SAFR-032]
gi|157682034|gb|ABV63178.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus SAFR-032]
Length = 786
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 225/797 (28%), Positives = 352/797 (44%), Gaps = 176/797 (22%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREAT--LTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ V S+ ++LG+E LT L I +T Q L + E I ++ GS
Sbjct: 7 LSSLEFHKVKEKVMSYTASTLGKERAQDLTPLTDI-ETIQHLLEEVAEAQDVIRLK--GS 63
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALL---------------------- 149
L+ ++ A++ S L P+E + + LL
Sbjct: 64 APFG----GLTDIRRAVKRAEIGSTLSPSELMEIAGLLYAVKNMKHFLTSMYEDGVDIPR 119
Query: 150 --QFSETLQL------SLRAAIKEDADLYIRFMP-LTQMLYQL----------MDMLIRN 190
++ETL L + + I ++ ++ P L + QL ++ +IR+
Sbjct: 120 LHTYAETLILLPDIRKEIESCIGDNGEVLDHATPALRTIRTQLRSLESKVRDKLEAMIRS 179
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
++ + + V+ + R I + S G ++ SSSG IEP V +N+ LQ
Sbjct: 180 QSASKMLSDTIVTIRNDRFVIPVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDVNNTLQ 239
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFL 305
Q R + E +L LTE + + E+ + + LD + A+A Y+ + T P +
Sbjct: 240 QTRLKEKQEVEKILQMLTESVSEHIGELLHNVKELQTLDFIFAKAKYAKTEKATKPAV-- 297
Query: 306 PQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRR 365
+ IYL +A HP
Sbjct: 298 --------------------NDQGEIYLKRARHP-------------------------- 311
Query: 366 RKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTIC 425
L P + V+ DI + + +VITGPNTGGKT+
Sbjct: 312 -----------------LLPRDQVVAN---------DIELGKDFSTIVITGPNTGGKTVT 345
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKT+GL +M ++GLHI E ++V FD VFADIGDEQS+ QSLSTFS H+ I +I+
Sbjct: 346 LKTLGLLTLMTQAGLHIPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 405
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
TS SLVL DE+GAGT+P EG AL MS+L+ ++ + + IATTH+ ELK Y+ +
Sbjct: 406 NLTSNSLVLFDELGAGTDPAEGAALAMSILDEVHQTNARV-IATTHYPELKAYGYNREGV 464
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
NA +EFD L PTY++L GVPGRS+A I++RLGLP ++ A+ A E++++I
Sbjct: 465 TNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLPDHLIDRAKADMHAEHNEVDQMI 524
Query: 606 IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR-------TRRKILEHCASQRFRKVQKI 658
+E K Q E +HE + + LHK L R + K+LE + +KI
Sbjct: 525 ASLEDSKKQAEEELHETEVYRKEAEKLHKELQRQILEWNEQKDKLLEEA---ELKAKEKI 581
Query: 659 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 718
A+ A ++ Q+L S+ RS R +++ F
Sbjct: 582 EQASKEAEEII----QELRSIKSEHRSFKEHELIDARKRLEEAV-------------PEF 624
Query: 719 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 778
+ + V+ +K GD V V +FG+KGT+++ + +E
Sbjct: 625 DRKKK------PEPAKKAVRQLKS------------GDEVKVLTFGQKGTLLE-QTGDKE 665
Query: 779 IVVQVGNMKWIMKFTDI 795
VQ+G +K +K D+
Sbjct: 666 WSVQMGILKMKVKEKDM 682
>gi|171779241|ref|ZP_02920212.1| hypothetical protein STRINF_01089 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282297|gb|EDT47724.1| MutS2 family protein [Streptococcus infantarius subsp. infantarius
ATCC BAA-102]
Length = 778
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 217/394 (55%), Gaps = 46/394 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LINPVANDLHFLDELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I++ + SLVL+DE+GAGT+P EG +L +S+
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVDILAAADKDSLVLVDELGAGTDPQEGASLAISI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHLRLT-QVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I RLGL ++V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIVRRLGLAEVIVNEAERLTDS-DTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L HK + L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNLHHKAS--L 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
GD + V+++G++GT+I Q N KW
Sbjct: 631 GDDIIVTAYGQRGTLIN----------QTKNGKW 654
>gi|7387927|sp|Q9ZEH5.1|MUTS2_STAAU RecName: Full=MutS2 protein
gi|3776110|emb|CAA11403.1| MutS-like protein [Staphylococcus aureus]
Length = 719
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 269 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 328
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 329 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 387
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 388 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 447
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 448 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 498
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 499 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 550
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 551 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 593
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + EE +VQ+G +K + D+
Sbjct: 594 LEI-VNDEEAIVQMGIIKMKLPIEDL 618
>gi|237741375|ref|ZP_04571856.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
gi|229430907|gb|EEO41119.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
Length = 778
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 45/417 (10%)
Query: 389 QVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA SG+
Sbjct: 297 EILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGI 356
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE+G+
Sbjct: 357 PIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGS 416
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L PT
Sbjct: 417 GTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPT 475
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+ +
Sbjct: 476 YRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELDEMR 534
Query: 621 E--ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
E AR L+ +I A Q ++K + I +S ++ + +
Sbjct: 535 ERFAR-------------LQEEARIDRERAKQETLIIEKQKN--EIIKSAYEEAEKMMNE 579
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
++A +LV K ++ ++ KN ++L++ ++ VE VVK
Sbjct: 580 MRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VVK 627
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
IK K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 628 KIKTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|379795514|ref|YP_005325512.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872504|emb|CCE58843.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 782
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 218/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + ++ Q
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLTK------QYHQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K I DA K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 565 YEK-SLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ ++EE +VQ+G +K + D+
Sbjct: 659 I-VNEEEAIVQMGIIKMKLPIDDL 681
>gi|34762391|ref|ZP_00143393.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887973|gb|EAA25039.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 718
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 223/415 (53%), Gaps = 41/415 (9%)
Query: 389 QVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA SG+
Sbjct: 237 EILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGI 296
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE+G+
Sbjct: 297 PIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGS 356
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L PT
Sbjct: 357 GTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPT 415
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+ +
Sbjct: 416 YRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELDEMR 474
Query: 621 EARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
E L + + + I+E ++ I +S ++ + +
Sbjct: 475 ERFARLQEEARIDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMNEMR 521
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
++A +LV K ++ ++ KN ++L++ ++ VE VVK I
Sbjct: 522 AKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VVKKI 569
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K K VGD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 570 KTKVNFK------VGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 618
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 83 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 138
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 139 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 195
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 196 LRNNKDDILTIGEKVMYLDILNAKSIYA 223
>gi|384135955|ref|YP_005518669.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290040|gb|AEJ44150.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 779
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 216/397 (54%), Gaps = 36/397 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + + R+L+ITGPNTGGKT+ LKT+GL +M SGL + + + + + VF
Sbjct: 316 VPIDVELGDRFRLLIITGPNTGGKTVTLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFV 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+++I +++ + T SLVLLDE+GAGT+P EG+AL +++L+
Sbjct: 376 DIGDEQSIEQNLSTFSSHMRRIIDMLERVTPDSLVLLDELGAGTDPAEGSALAIAILDHL 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK + N ENA MEFD L+PTY++L GVPGRS+A+ IAE
Sbjct: 436 TSVGARV-VATTHYAELKGYAFRNPAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAE 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLG+P +++ AR ++ + ++I ++E + EA L +R+ +L R
Sbjct: 495 RLGMPKEILERARSHVAESNIHVEDLIGKLEAASREAERMRDEAERALREARDQAADLAR 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ A+ K AA AR ++ ++ ++ + RSL + +A
Sbjct: 555 QK-------AAWEASKDSMREQAAREAREVIERARREADAVIREIRSLRDR-------AA 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ ++ K ++T PA R R E+ G V
Sbjct: 601 VKDHELVELRKRLEAAEPGEKRT-------PAR-------------RRMRAEV-RPGQRV 639
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S G+KG V++V VVQ+G M+ + +D+
Sbjct: 640 RVLSLGQKGDVVEVAQDGRAAVVQLGAMRMKVDASDL 676
>gi|384867975|ref|YP_005748171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|312438480|gb|ADQ77551.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
Length = 782
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 217/386 (56%), Gaps = 38/386 (9%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 709
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 710 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 770 IKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ KE I VQ+G +K + D+
Sbjct: 657 LEIVNDKEAI-VQMGIIKMKLPIEDL 681
>gi|418312639|ref|ZP_12924148.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
gi|365238284|gb|EHM79121.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
Length = 782
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVKKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|306820562|ref|ZP_07454193.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551379|gb|EFM39339.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 785
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 215/407 (52%), Gaps = 57/407 (14%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I I + LVITGPNTGGKT+ LKT+GL +M + GLHI + F+++FADIGD
Sbjct: 318 IEIGKSYTTLVITGPNTGGKTVTLKTLGLLCIMLQCGLHIPCDIGSSGYIFNNIFADIGD 377
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS++QSLSTFS H+ I I+++ SLVL DE+GAGT+P+EG L +S+L+ E
Sbjct: 378 EQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFDELGAGTDPVEGAGLAISILDTLKEK- 436
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+LT ATTH+ ELK + D NA +EFD L PTY+++ G+PG+S+A I+++LGL
Sbjct: 437 DILTAATTHYSELKNYALTVDKVTNASVEFDVNTLSPTYRLIIGIPGKSNAFEISQKLGL 496
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQF------LEHVHEARHFLMLS-RNLHKN 635
++Q AR S ++ +VI ++++ K ++ LE E F+ L N +
Sbjct: 497 STGIIQRARDSIHTESIKVEDVITKLDKIKNEYEEKKQRLEKELEDAEFIRLKLENRERR 556
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
+ KILE ++ ARSLV + A ++K +L+
Sbjct: 557 AQQNSEKILEEAKNK--------------ARSLVEE--------AKNEADEINKVLNKLK 594
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD---IKQSPRVKRTELP 752
S S+++ +DK + + KD K+ VK E P
Sbjct: 595 KS------------------SDYK--NIDKKMNEIKGRINTYKDKYAKKKEELVKSNEKP 634
Query: 753 ----NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VGD V+V+SF + V+ V+ K E+VVQ+G +K +K +I
Sbjct: 635 IENVGVGDTVYVNSFAQNAKVLSVDDKKNEVVVQLGAIKMTLKKENI 681
>gi|427405780|ref|ZP_18895985.1| MutS2 family protein [Selenomonas sp. F0473]
gi|425708621|gb|EKU71660.1| MutS2 family protein [Selenomonas sp. F0473]
Length = 785
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 210/786 (26%), Positives = 349/786 (44%), Gaps = 159/786 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK--- 108
E+ +VLE++K+ ++SFA + G+E T + S + RL +ET A+ + +
Sbjct: 4 EAFKVLEYEKIKKRLASFAFSIRGKELCRTMIPSAE--FDTVTRLHEETAEAVRVLQIQT 61
Query: 109 ---HGSCSL----------------DLTGVDLSL-----VKSAIREVRRASPLRPNEALA 144
G C L +L + ++ +K R+ PL + +
Sbjct: 62 PPFGGICDLRHILQKATLGSVLEVEELREIMSTMQGMRNIKYFFRDAEFELPLLKEQTIR 121
Query: 145 VVALLQFSETLQLSL--RAAIKEDADLYIR-----FMPLTQMLYQLMDMLIRNENNESLF 197
+ L LQ ++ ++DA L +R + + + + ++ + + F
Sbjct: 122 IEILGMLERRLQNTIDEHGNFRDDASLELRRVTRELVSAQGRVKEKLSAILHDAAYQKCF 181
Query: 198 LE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
E ++ R I + + F G++ S+SG +EPL+ V LN+ ++Q +
Sbjct: 182 QEPIITVRDERYVIPVKQEYRNQFPGVIHDQSASGATLFVEPLATVELNNTVRQMEIARE 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ +L LT+++ D + + + LD + ARA + + +P +F
Sbjct: 242 HEIQRILQQLTQEIASSSDILSENCTILAGLDFIFARAGLAHNMDAYAP-VF-------- 292
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
R + L +A HPLL
Sbjct: 293 -------------NRSRYVRLRRARHPLL------------------------------- 308
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
P E QV VPIDI + R VL+ITGPNTGGKT+ +KT+G+
Sbjct: 309 ------------PKE-QV--------VPIDIELGRDFSVLLITGPNTGGKTVSMKTLGIL 347
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSL 492
+MA+SG + ++ A++P + S++ADIGDEQS+ QSLSTFS H K I I+ ++ + L
Sbjct: 348 ALMAQSGCFLPTAPGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAGGEDL 407
Query: 493 VLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
VLLDE+GAGT+P EG AL S++E + +ATTH+ LKT Y NA +EF
Sbjct: 408 VLLDEVGAGTDPDEGAALARSIIEYLLHK-HISVVATTHYAALKTYAYGRKGVMNASVEF 466
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D L+PTY++L G PG S+A +I+ RLGL +V A+Q ++ E+E+ K
Sbjct: 467 DIATLRPTYRLLIGTPGASNAFSISRRLGLSQEIVARAQQYINEDHVRFEIIVNELEQEK 526
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRK---ILE---HCASQRFRKVQKISDAAAIAR 666
++ E +H N LR R + +LE H +F R
Sbjct: 527 REY-----EKKH----------NELRVREQKFSVLEERLHIERDKFIHAH---------R 562
Query: 667 SLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKV 726
L+HK+ ++ +AR + A++ + + V + + V+ S +Q +
Sbjct: 563 DLLHKAREEANNIVREAR----RNAEETIKTLKEQFDDHGVKERRKVIQSVREQLKDAYI 618
Query: 727 EHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNM 786
TA SV I R E GD+V++ + ++GTV+ V + E+ VQVG +
Sbjct: 619 PQSMTAGISVGTKI-------RAEDIQRGDIVYIKNLAREGTVLSVHEN--ELTVQVGGL 669
Query: 787 KWIMKF 792
+ I+K
Sbjct: 670 RTIVKI 675
>gi|289578704|ref|YP_003477331.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
gi|289528417|gb|ADD02769.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
Length = 791
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 232/467 (49%), Gaps = 93/467 (19%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+FKG++ SSSG IEP+ V LN+EL+Q + + +L L+++++ +
Sbjct: 208 TFKGIVHDQSSSGATLFIEPMQVVDLNNELRQVELKERQEIQRILFELSQEVKKYAQALF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + +LD A+A YSL P + ++ + I L
Sbjct: 268 NDIEIVSELDFTFAKAKYSLKLKAVRPEL-------NTMGY---------------INLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL+ Q E
Sbjct: 306 KARHPLINQ--------------------------------------------------E 315
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
P+ DI+I + LVITGPNTGGKT+ LKTVGL +MA +GL+I + E ++V F+
Sbjct: 316 AVVPI--DIYIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+F DIGDEQS+ QSLSTFS H+ I +++ + L LLDE+GAGT+P+EG AL MS+
Sbjct: 374 EIFVDIGDEQSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + G+ TIATTH+ ELK ENA +EFD LKPTYK++ G+PG+S+A
Sbjct: 434 LDTLHKIGA-KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA+RLGLP ++++AR+ + + ++I ++E + + + HE L +N+
Sbjct: 493 EIAKRLGLPRQIIEDARKYISGEALKFEDIIADVESKRRELEKANHE---MAFLRKNVEI 549
Query: 635 NLL----------RTRRKILEHCASQRFRKVQKISDAAAIARSLVHK 671
R KIL+ A +R RK+ + +A A ++ K
Sbjct: 550 LKEELEKEKKKLQNERDKILKE-AKERARKI--VQEAKFTAEGIIKK 593
>gi|450099879|ref|ZP_21858555.1| putative DNA mismatch repair protein [Streptococcus mutans SF1]
gi|450171907|ref|ZP_21884274.1| putative DNA mismatch repair protein [Streptococcus mutans SM4]
gi|449220695|gb|EMC20543.1| putative DNA mismatch repair protein [Streptococcus mutans SF1]
gi|449243318|gb|EMC41759.1| putative DNA mismatch repair protein [Streptococcus mutans SM4]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|302871595|ref|YP_003840231.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574454|gb|ADL42245.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 786
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 221/410 (53%), Gaps = 55/410 (13%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + ++ VLVITGPNTGGKT+ LKT+GL ++A+SG+ I + + ++V F +FA
Sbjct: 313 VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGVFIPADDRSEVCVFSKIFA 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I I + S +LVLLDEIG+GT+P EG AL ++L+
Sbjct: 373 DIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAILKFL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+GELKT + FENA EFD LKPTY++L G+PG S+A+ I+
Sbjct: 433 HNKGAKV-VATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISS 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH-------EARHFLMLSRN 631
LGL +++ A+ + E+ ++I EMER + + E + EA
Sbjct: 492 NLGLNKEIIELAKGYMSKKTLELTDIINEMERKRRELEEALESANKLKSEAEELKKTLEE 551
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+ ++KI E + + VQK+ D V K
Sbjct: 552 ERRRFEAEKQKIKERASKEAREFVQKVEDE-------------------------VEKLF 586
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK---R 748
++L+ A +SL ++ + ++E ++VK I+Q+ R + +
Sbjct: 587 KELKKIA-ESLK---------------EKEMLKQLEEKKREYENLVKSIEQASRKEEKLQ 630
Query: 749 TELPN---VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++LP +G V+V SF +G V + SK + V++G MK + +DI
Sbjct: 631 SKLPENLRLGQKVYVKSFDAEGFVESLPDSKGNLTVRIGIMKLSVNISDI 680
>gi|282916393|ref|ZP_06324155.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283770204|ref|ZP_06343096.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
gi|282319833|gb|EFB50181.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283460351|gb|EFC07441.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
Length = 782
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 218/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ ++EE +VQ+G +K + D+
Sbjct: 659 I-VNEEEAIVQMGIIKMKLPIEDL 681
>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81692142|sp|Q67QE3.1|MUTS2_SYMTH RecName: Full=MutS2 protein
gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 793
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 207/402 (51%), Gaps = 38/402 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ I LVITGPNTGGKT+ LKT+GL V+MA++GLH+ + +V F VF
Sbjct: 312 VPIDVHIGITFDTLVITGPNTGGKTVALKTMGLFVLMAQAGLHLPAGHGTRVGVFQQVFV 371
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFSGH+ I I+ +LVLLDE+GAGT+P EG AL MS+LE
Sbjct: 372 DIGDEQSIEQSLSTFSGHMTNIIRILDALEGPALVLLDELGAGTDPTEGAALAMSILEHL 431
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ T+ATTH+ ELKT Y+ ENA +EFD L+PT+++L GVPG S+A I+
Sbjct: 432 HKRGA-KTVATTHYSELKTYAYTRSRVENASVEFDVETLRPTFRLLIGVPGSSNAFEISR 490
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V ARQ + E ER + ++ +H R L R L
Sbjct: 491 RLGLSPHIVDRARQF----------LTQEQERVE-DLIQGIHATRAELEKERAEAHRL-- 537
Query: 639 TRRKILEHCASQRFRK--VQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+QR R+ ++ DA A V K+ Q A Q + + A+ +
Sbjct: 538 -------RAEAQRMREEYERRYGDAQRKAAETVEKARAQ----AQQILATARREAEAVIA 586
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP---N 753
Q+L + + + S + A A +V ++ +R E+P
Sbjct: 587 ELKQALREQREAERMQAIQSARSRL--------ARARQAVEPTEEEQRARRRGEVPRGLK 638
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V S G V+ + ++VQ G +K + TD+
Sbjct: 639 PGDKVRVVSLDTTGYVLSEPDADGNVLVQAGILKMTVSLTDL 680
>gi|450036454|ref|ZP_21835503.1| putative DNA mismatch repair protein [Streptococcus mutans M21]
gi|449193995|gb|EMB95363.1| putative DNA mismatch repair protein [Streptococcus mutans M21]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|450003296|ref|ZP_21826128.1| putative DNA mismatch repair protein [Streptococcus mutans N29]
gi|449182673|gb|EMB84686.1| putative DNA mismatch repair protein [Streptococcus mutans N29]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 174/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|334138498|ref|ZP_08511917.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
gi|333604147|gb|EGL15542.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
Length = 825
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 210/397 (52%), Gaps = 33/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +++TGPNTGGKT+ LKTVGL +MA SGL + + E +++ FD +FA
Sbjct: 356 VPIDLELGGSFTTIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPAEEGSELCVFDGIFA 415
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ T +SLVLLDE+GAGT+P EG+AL +SLLE
Sbjct: 416 DIGDEQSIEQSLSTFSSHMTNIIGILRDMTPKSLVLLDELGAGTDPAEGSALAISLLENI 475
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + IATTH+ ELK + NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 476 HRMGCRM-IATTHYSELKAYAFERRGVINASMEFDVQTLSPTYRLLVGVPGRSNAFAIAE 534
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ AR + +I +E + H A + L L
Sbjct: 535 RLGLPRAIIDKARGQVSDEDQRVETMIASLEENRLTAEAERHSAEQIRRENEELRAALSA 594
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R K+ E + ++ DA A AR + A+++ + R L + A ++
Sbjct: 595 ERAKLDEQRDKVLLKAEREAQDAIAKAR----REAEEII---ADLRRLAKEEAGAIK--- 644
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
H L + ++ +D+ E + K + P + E+ GD V
Sbjct: 645 ------------DHKLIAARRR--LDEAE------PKLRKPGAKRPERSKAEV-EPGDEV 683
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S G+KG V+++ S E+ VQ+G MK + TD+
Sbjct: 684 RVVSLGQKGHVVEIVNSS-EVTVQLGIMKMKVNKTDL 719
>gi|450121273|ref|ZP_21866224.1| putative DNA mismatch repair protein [Streptococcus mutans ST6]
gi|449229366|gb|EMC28684.1| putative DNA mismatch repair protein [Streptococcus mutans ST6]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKTNKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449919980|ref|ZP_21798262.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
1SM1]
gi|449159061|gb|EMB62445.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
1SM1]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|392428087|ref|YP_006469098.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
gi|419776965|ref|ZP_14302883.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|383845176|gb|EID82580.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|391757233|dbj|BAM22850.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
Length = 777
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 214/387 (55%), Gaps = 40/387 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L + HP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVTHPLIENAVANDLYFASDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
++V FD +FADIGDEQS+ QSLSTFS H+ I I+ Q +LVLLDE+GAGT+P
Sbjct: 357 DNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQVDENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A+ IA RLGL +VV++A++ S ++N +I ER + Q L E+R
Sbjct: 476 QGVPGRSNALEIARRLGLSELVVRHAQEQTNTDS-DVNRII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQA- 623
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIK 771
K+ P VGD + V+S+G++GT++K
Sbjct: 624 --KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|449991864|ref|ZP_21822066.1| putative DNA mismatch repair protein [Streptococcus mutans NVAB]
gi|449180548|gb|EMB82702.1| putative DNA mismatch repair protein [Streptococcus mutans NVAB]
Length = 776
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449960471|ref|ZP_21810666.1| putative DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|450137927|ref|ZP_21871898.1| putative DNA mismatch repair protein [Streptococcus mutans NLML1]
gi|449167477|gb|EMB70355.1| putative DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|449234624|gb|EMC33624.1| putative DNA mismatch repair protein [Streptococcus mutans NLML1]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|424787034|ref|ZP_18213805.1| mutS2 family protein [Streptococcus intermedius BA1]
gi|422114285|gb|EKU17992.1| mutS2 family protein [Streptococcus intermedius BA1]
Length = 777
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 214/387 (55%), Gaps = 40/387 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L + HP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVTHPLIENAVANDLYFASDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
++V FD +FADIGDEQS+ QSLSTFS H+ I I+ Q +LVLLDE+GAGT+P
Sbjct: 357 DNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQVDENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A+ IA RLGL +VV++A++ S ++N +I ER + Q L E+R
Sbjct: 476 QGVPGRSNALEIARRLGLSELVVRHAQEQTNTDS-DVNRII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQA- 623
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIK 771
K+ P VGD + V+S+G++GT++K
Sbjct: 624 --KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|24380226|ref|NP_722181.1| DNA mismatch repair protein MutS2 [Streptococcus mutans UA159]
gi|449866442|ref|ZP_21779506.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
U2B]
gi|449870843|ref|ZP_21780872.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
8ID3]
gi|81744187|sp|Q8DSD1.1|MUTS2_STRMU RecName: Full=MutS2 protein
gi|24378234|gb|AAN59487.1|AE015013_6 putative DNA mismatch repair protein MutS2 [Streptococcus mutans
UA159]
gi|449155904|gb|EMB59392.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
8ID3]
gi|449263739|gb|EMC61102.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
U2B]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|450111403|ref|ZP_21862684.1| putative DNA mismatch repair protein [Streptococcus mutans SM6]
gi|449223821|gb|EMC23487.1| putative DNA mismatch repair protein [Streptococcus mutans SM6]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449880587|ref|ZP_21783931.1| putative DNA mismatch repair protein [Streptococcus mutans SA38]
gi|449924326|ref|ZP_21799566.1| putative DNA mismatch repair protein [Streptococcus mutans 4SM1]
gi|449951370|ref|ZP_21808656.1| putative DNA mismatch repair protein [Streptococcus mutans 11SSST2]
gi|450006865|ref|ZP_21827419.1| putative DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|450051153|ref|ZP_21840681.1| putative DNA mismatch repair protein [Streptococcus mutans NFSM1]
gi|449162912|gb|EMB66031.1| putative DNA mismatch repair protein [Streptococcus mutans 4SM1]
gi|449166273|gb|EMB69218.1| putative DNA mismatch repair protein [Streptococcus mutans 11SSST2]
gi|449187160|gb|EMB88956.1| putative DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|449202085|gb|EMC03034.1| putative DNA mismatch repair protein [Streptococcus mutans NFSM1]
gi|449252865|gb|EMC50834.1| putative DNA mismatch repair protein [Streptococcus mutans SA38]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|383761505|ref|YP_005440487.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381773|dbj|BAL98589.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 811
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 272/568 (47%), Gaps = 89/568 (15%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEPL V N+ +++ K +LL L+ + + + + + + +L
Sbjct: 214 SASGATLFIEPLKVVQQNNAVRELELQEEKEVRRILLELSTAVAEEAVYLRRNVQALARL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D A+A Y+ + T P + LP +RS T + +++ I L +A HPL
Sbjct: 274 DFTFAKARYAYALDATVPEM-LPFQPRRSKQKRDETEE-AAAHPGSIIDLRRARHPL--- 328
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
L P + VPID+
Sbjct: 329 ---------------------------------------LDPQTV----------VPIDV 339
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ T ++VITGPNTGGKT+ LKTVGL +MA+SGL I + +++ F+ ++ADIGDE
Sbjct: 340 YLDDDTYIIVITGPNTGGKTVTLKTVGLLTLMAQSGLMIPADVGSRLSVFEGIYADIGDE 399
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ Q+LSTFS H+ I I+ ++ SLVLLDE+GAGT+P EG+AL ++LLE + G
Sbjct: 400 QSIEQNLSTFSSHMTNIIAILEEADPHSLVLLDELGAGTDPEEGSALAIALLENLRDRG- 458
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ T ATTH+ +LK ++ NA +EFD L PTY++ G+PGRS+A+ IA RLGL
Sbjct: 459 ITTFATTHYSDLKLYAHNTPGVRNASVEFDVETLSPTYELSIGLPGRSNALTIARRLGLN 518
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++V+ A + + + ++++ ++ R + + LE A+ +R LL
Sbjct: 519 PVIVEKAESIVRPDTLQADKLLDDIRRARQEALEAAERAK-----ARERQAQLLE----- 568
Query: 644 LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP--SASQS 701
A R++ Q I A RS++ ++ + AR + + +Q R S +
Sbjct: 569 ----ADLRYQLAQ-IEQA---RRSVIAETRALMQAELEAARKEIEQLRRQARSGFSTGTT 620
Query: 702 LHCTKVGKNQHVLTSNFQQT--TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 759
H + + + L Q T +V P +A ++ I+ VGD V
Sbjct: 621 AHEEFLARAEKELARRSQATEEVNRRVVVPGSAEERLIGSIE------------VGDTVW 668
Query: 760 VSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
V S G V+ + + E VQ+GN +
Sbjct: 669 VPSLQASGEVLAIHSASNEADVQLGNFR 696
>gi|306826722|ref|ZP_07460024.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
gi|304431011|gb|EFM34018.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
Length = 818
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG++L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGSSLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKT-QFLEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T + L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P ++ + Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP--------------HEIIDAKVQ---IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|450177566|ref|ZP_21886450.1| putative DNA mismatch repair protein [Streptococcus mutans SM1]
gi|449243530|gb|EMC41950.1| putative DNA mismatch repair protein [Streptococcus mutans SM1]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|450162021|ref|ZP_21880732.1| putative DNA mismatch repair protein [Streptococcus mutans 66-2A]
gi|449237888|gb|EMC36687.1| putative DNA mismatch repair protein [Streptococcus mutans 66-2A]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449980753|ref|ZP_21817395.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
5SM3]
gi|449176541|gb|EMB78883.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
5SM3]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|339300884|ref|ZP_08650011.1| DNA mismatch repair protein MutS [Streptococcus agalactiae ATCC
13813]
gi|319745675|gb|EFV97974.1| DNA mismatch repair protein MutS [Streptococcus agalactiae ATCC
13813]
Length = 782
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 310 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 430 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 489 EIAFRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 542
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 543 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 589
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 590 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQIDLSKNKV--LNKAKKIKA 630
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 631 ARAPRIGDDIIVTSYGQRGTL 651
>gi|449974641|ref|ZP_21815392.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
11VS1]
gi|449178151|gb|EMB80427.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
11VS1]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449888771|ref|ZP_21787401.1| putative DNA mismatch repair protein [Streptococcus mutans SA41]
gi|449903742|ref|ZP_21792312.1| putative DNA mismatch repair protein [Streptococcus mutans M230]
gi|449937037|ref|ZP_21804333.1| putative DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|449964658|ref|ZP_21811420.1| putative DNA mismatch repair protein [Streptococcus mutans 15VF2]
gi|450040620|ref|ZP_21836912.1| putative DNA mismatch repair protein [Streptococcus mutans T4]
gi|450077955|ref|ZP_21850736.1| putative DNA mismatch repair protein [Streptococcus mutans N3209]
gi|450156273|ref|ZP_21878651.1| putative DNA mismatch repair protein [Streptococcus mutans 21]
gi|449164848|gb|EMB67886.1| putative DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|449172224|gb|EMB74856.1| putative DNA mismatch repair protein [Streptococcus mutans 15VF2]
gi|449198759|gb|EMB99859.1| putative DNA mismatch repair protein [Streptococcus mutans T4]
gi|449210526|gb|EMC10980.1| putative DNA mismatch repair protein [Streptococcus mutans N3209]
gi|449236083|gb|EMC35014.1| putative DNA mismatch repair protein [Streptococcus mutans 21]
gi|449250943|gb|EMC48980.1| putative DNA mismatch repair protein [Streptococcus mutans SA41]
gi|449260649|gb|EMC58147.1| putative DNA mismatch repair protein [Streptococcus mutans M230]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|384547383|ref|YP_005736636.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|417904179|ref|ZP_12548009.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
gi|298694432|gb|ADI97654.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|341848002|gb|EGS89171.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
Length = 782
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|253733620|ref|ZP_04867785.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728419|gb|EES97148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
Length = 782
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLSIEDL 681
>gi|450069047|ref|ZP_21847411.1| putative DNA mismatch repair protein [Streptococcus mutans NLML9]
gi|449205910|gb|EMC06637.1| putative DNA mismatch repair protein [Streptococcus mutans NLML9]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449896970|ref|ZP_21790028.1| putative DNA mismatch repair protein [Streptococcus mutans R221]
gi|449985259|ref|ZP_21819560.1| putative DNA mismatch repair protein [Streptococcus mutans NFSM2]
gi|449179346|gb|EMB81562.1| putative DNA mismatch repair protein [Streptococcus mutans NFSM2]
gi|449261294|gb|EMC58772.1| putative DNA mismatch repair protein [Streptococcus mutans R221]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|449875347|ref|ZP_21782165.1| putative DNA mismatch repair protein [Streptococcus mutans S1B]
gi|449930543|ref|ZP_21802100.1| putative DNA mismatch repair protein [Streptococcus mutans 3SN1]
gi|449163467|gb|EMB66571.1| putative DNA mismatch repair protein [Streptococcus mutans 3SN1]
gi|449254014|gb|EMC51942.1| putative DNA mismatch repair protein [Streptococcus mutans S1B]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|387785473|ref|YP_006250569.1| putative DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379131874|dbj|BAL68626.1| putative DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|418643039|ref|ZP_13205225.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|418649444|ref|ZP_13211472.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
gi|375016152|gb|EHS09796.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|375029817|gb|EHS23142.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
Length = 717
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|290579799|ref|YP_003484191.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449971700|ref|ZP_21814507.1| putative DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|450031639|ref|ZP_21833757.1| putative DNA mismatch repair protein [Streptococcus mutans G123]
gi|450059517|ref|ZP_21843461.1| putative DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|450091332|ref|ZP_21855429.1| putative DNA mismatch repair protein [Streptococcus mutans W6]
gi|450150889|ref|ZP_21876777.1| putative DNA mismatch repair protein [Streptococcus mutans 14D]
gi|450167765|ref|ZP_21882661.1| putative DNA mismatch repair protein [Streptococcus mutans B]
gi|254996698|dbj|BAH87299.1| putative DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449171703|gb|EMB74353.1| putative DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|449191452|gb|EMB92939.1| putative DNA mismatch repair protein [Streptococcus mutans G123]
gi|449203002|gb|EMC03883.1| putative DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|449219516|gb|EMC19481.1| putative DNA mismatch repair protein [Streptococcus mutans W6]
gi|449232827|gb|EMC31922.1| putative DNA mismatch repair protein [Streptococcus mutans 14D]
gi|449238142|gb|EMC36922.1| putative DNA mismatch repair protein [Streptococcus mutans B]
Length = 776
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|417899642|ref|ZP_12543544.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
gi|341844570|gb|EGS85782.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
Length = 688
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|350567081|ref|ZP_08935686.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
gi|348659744|gb|EGY76471.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
Length = 766
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 220/397 (55%), Gaps = 44/397 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + L+ITGPNTGGKT+ +KT+GL +MA+ GLHI + E +++ FD V A
Sbjct: 318 VPIDISLGGEFTSLIITGPNTGGKTVSIKTLGLLTLMAQYGLHIPTMENSEIAIFDKVLA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ + T +SLV+ DE+GAGT+P EG AL S+++ F
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVEILKEITPKSLVIFDELGAGTDPTEGAALARSIMD-F 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ I+TTH+ +LK S D +NA MEF+ L PTYK+L GVPG+S+A I+
Sbjct: 437 MLRRKIRCISTTHYNQLKLYALSTDGVQNASMEFNVDTLSPTYKLLIGVPGKSNAFEISR 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR-------HFLMLSRN 631
+LGLP I++++A+++ + E EV+ +E+ +T+ E+ A +
Sbjct: 497 KLGLPDIIIRDAKKMISEDNIEFEEVLSSIEKDRTRIEEYKQAAEIESLEYKKKNEKLKK 556
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+ L + R K+LE + R V + + + + + +Q+ +++QAR L + A
Sbjct: 557 EIEKLNQEREKVLEKAREEANRLVLTTRENMELVINELSELREQM--NSAQARKL--QEA 612
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
Q L + +S KN+ VL + V+ ++K
Sbjct: 613 QDLYRESFKSAQ----KKNEFVLEK----------------ADEVIGELK---------- 642
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
VG+ V +S +G V+++ SK ++++Q+G +K
Sbjct: 643 --VGETVRSTSLNSEGVVLELPDSKNQVLLQMGMLKM 677
>gi|418953440|ref|ZP_13505433.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
gi|375375040|gb|EHS78649.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
Length = 717
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|450010575|ref|ZP_21828759.1| putative DNA mismatch repair protein [Streptococcus mutans A19]
gi|450024329|ref|ZP_21831183.1| putative DNA mismatch repair protein [Streptococcus mutans U138]
gi|450114681|ref|ZP_21863454.1| putative DNA mismatch repair protein [Streptococcus mutans ST1]
gi|449190075|gb|EMB91679.1| putative DNA mismatch repair protein [Streptococcus mutans A19]
gi|449192120|gb|EMB93553.1| putative DNA mismatch repair protein [Streptococcus mutans U138]
gi|449228899|gb|EMC28246.1| putative DNA mismatch repair protein [Streptococcus mutans ST1]
Length = 776
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKDLQDKAQLKP 594
>gi|418559141|ref|ZP_13123687.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
gi|371975432|gb|EHO92726.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|229550105|ref|ZP_04438830.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255972883|ref|ZP_05423469.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257422707|ref|ZP_05599697.1| MutS2 family protein [Enterococcus faecalis X98]
gi|312952408|ref|ZP_07771283.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|384518505|ref|YP_005705810.1| mutS2 protein [Enterococcus faecalis 62]
gi|422693114|ref|ZP_16751129.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|422706763|ref|ZP_16764461.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|422726956|ref|ZP_16783399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|229304809|gb|EEN70805.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255963901|gb|EET96377.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257164531|gb|EEU94491.1| MutS2 family protein [Enterococcus faecalis X98]
gi|310629792|gb|EFQ13075.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|315152573|gb|EFT96589.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|315155852|gb|EFT99868.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|315157981|gb|EFU01998.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|323480638|gb|ADX80077.1| mutS2 protein [Enterococcus faecalis 62]
Length = 788
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 224/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLKGN-GKGQWQVQLGILKMNVSEEDM 685
>gi|397650425|ref|YP_006490952.1| DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449942440|ref|ZP_21806022.1| putative DNA mismatch repair protein [Streptococcus mutans 11A1]
gi|392603994|gb|AFM82158.1| putative DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449150536|gb|EMB54297.1| putative DNA mismatch repair protein [Streptococcus mutans 11A1]
Length = 776
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|445059987|ref|YP_007385391.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
gi|443426044|gb|AGC90947.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 216/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 392 TFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHDELEK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K ++LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADAILKELRELRDKKGADV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------AKSIKQNVQKQKYDKIQAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGILKMKLPIEDL 681
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
F G++ S+SG IEP S V +N+++ + R E +L LT ++ V+ D +
Sbjct: 209 DFNGIVHDQSASGQTLYIEPSSVVEMNNQISRLRNDEAVERERILTELTSQVAVESDALL 268
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + LD + A+A Y+ + GT P E T+YLP
Sbjct: 269 LAESIMGHLDFLIAKARYARAIKGTKPTFH----------------------NERTVYLP 306
Query: 335 KAYHPLL 341
AYHPLL
Sbjct: 307 NAYHPLL 313
>gi|418906080|ref|ZP_13460107.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377765380|gb|EHT89230.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|418928400|ref|ZP_13482286.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377738312|gb|EHT62321.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|418873293|ref|ZP_13427600.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
gi|375366347|gb|EHS70347.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
Length = 717
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|386363351|ref|YP_006072682.1| mutS2 family protein [Streptococcus pyogenes Alab49]
gi|350277760|gb|AEQ25128.1| mutS2 family protein [Streptococcus pyogenes Alab49]
Length = 779
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLASQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|313887962|ref|ZP_07821641.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846128|gb|EFR33510.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 791
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 171/574 (29%), Positives = 268/574 (46%), Gaps = 107/574 (18%)
Query: 219 KGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKM 276
KGL+ +S SG + IEP++ V N++L++ E +L L+E + +EI+
Sbjct: 214 KGLVHDISGSGQTAYIEPMAVVEANNDLKELYIKENLEIEKILKELSELVGETSEEIKSN 273
Query: 277 LNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKA 336
+I+LD + A+A L++ P + RE I L KA
Sbjct: 274 QEKLIELDFIFAKARLGLNYRANMPKL----------------------NREGRINLIKA 311
Query: 337 YHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELA 396
YHP L RK+
Sbjct: 312 YHPFL-----------------------DRKI---------------------------- 320
Query: 397 HPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSV 456
VPIDI + L++TGPNTGGKT+ +KTVGL +M + GL I + E +++ F+ V
Sbjct: 321 -AVPIDINLGIDFTSLIVTGPNTGGKTVSIKTVGLLTLMTQFGLLIPADEASEIAVFEKV 379
Query: 457 FADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLE 516
FADIGDEQS+ QSLSTFS H+ I I+ T SLVL DE+GAGT+P EG AL S+++
Sbjct: 380 FADIGDEQSIEQSLSTFSSHMVNIVYILKNVTPNSLVLFDELGAGTDPTEGAALARSIMD 439
Query: 517 AFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINI 576
E + I+T+H+ +LK + D NA MEFD L PTY++L GVPG+S+A I
Sbjct: 440 FMLER-KIRCISTSHYNQLKIYALTTDGVANASMEFDVDSLSPTYRLLIGVPGKSNAFEI 498
Query: 577 AERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
+ RLGLP ++ A++L + + E +V+ ++ +T+ E+ E
Sbjct: 499 SRRLGLPDEIIGEAKKLLSSENIEFEDVLQSIDEDRTKIREYREEL-------------- 544
Query: 637 LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+ LE + K++K+ D + A++L + + ++ + R
Sbjct: 545 -EREKADLEKENKRLQSKIKKLEDQKEKILEKSREEAKRLLLNTKENVDIILSEINEARD 603
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
S S + K+ + Q +L + + DK E T +++ +++IK VGD
Sbjct: 604 KIS-SENSKKIQEAQDLLRESIKNAR-DKSELEITKAANPIREIK------------VGD 649
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIM 790
V +S G TV+++ K ++VQ G MK M
Sbjct: 650 KVR-TSLGNLATVLELPDKKGNVLVQSGIMKMNM 682
>gi|418993763|ref|ZP_13541400.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
gi|377746922|gb|EHT70892.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|256958895|ref|ZP_05563066.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|257078926|ref|ZP_05573287.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294780084|ref|ZP_06745460.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|307271106|ref|ZP_07552389.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|397699794|ref|YP_006537582.1| mutS2 protein [Enterococcus faecalis D32]
gi|422708383|ref|ZP_16765911.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|422718757|ref|ZP_16775408.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|256949391|gb|EEU66023.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|256986956|gb|EEU74258.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294452836|gb|EFG21262.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|306512604|gb|EFM81253.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|315033806|gb|EFT45738.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|315036891|gb|EFT48823.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|397336433|gb|AFO44105.1| mutS2 protein [Enterococcus faecalis D32]
Length = 788
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 224/397 (56%), Gaps = 28/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++G++GT++K K + VQ+G +K + D+
Sbjct: 650 IVNTYGQRGTLLKGN-GKGQWQVQLGILKMNVSEEDM 685
>gi|418280914|ref|ZP_12893736.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
gi|365167015|gb|EHM58492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|288906127|ref|YP_003431349.1| Mismatch repair ATPase (MutS family) [Streptococcus gallolyticus
UCN34]
gi|386338568|ref|YP_006034737.1| DNA mismatch repair protein MutS2 [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|288732853|emb|CBI14432.1| Mismatch repair ATPase (MutS family) [Streptococcus gallolyticus
UCN34]
gi|334281204|dbj|BAK28778.1| DNA mismatch repair protein MutS2 [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 778
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 221/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LIDPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++ + + VQVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLVN-QGKNGKWEVQVGLIKMTLK 666
>gi|417799021|ref|ZP_12446173.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
gi|334274913|gb|EGL93219.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|57651753|ref|YP_186017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus COL]
gi|87161406|ref|YP_493741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194845|ref|YP_499643.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221268|ref|YP_001332090.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509318|ref|YP_001574977.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140458|ref|ZP_03564951.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451841|ref|ZP_05699862.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|262048725|ref|ZP_06021607.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|282919921|ref|ZP_06327650.1| MutS2 protein [Staphylococcus aureus A9765]
gi|284024069|ref|ZP_06378467.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 132]
gi|294848134|ref|ZP_06788881.1| MutS2 protein [Staphylococcus aureus A9754]
gi|304381299|ref|ZP_07363952.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014337|ref|YP_005290573.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|384861738|ref|YP_005744458.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384869677|ref|YP_005752391.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781372|ref|YP_005757543.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|387142755|ref|YP_005731148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|415688463|ref|ZP_11452153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|417648497|ref|ZP_12298321.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|418282999|ref|ZP_12895756.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|418286447|ref|ZP_12899093.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|418318056|ref|ZP_12929471.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|418321588|ref|ZP_12932927.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|418570974|ref|ZP_13135228.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|418574595|ref|ZP_13138762.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|418578974|ref|ZP_13143069.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418647620|ref|ZP_13209683.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|418657820|ref|ZP_13219574.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|418875077|ref|ZP_13429339.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|418903353|ref|ZP_13457394.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418911750|ref|ZP_13465733.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|419775285|ref|ZP_14301227.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|422743467|ref|ZP_16797451.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422745626|ref|ZP_16799565.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424784971|ref|ZP_18211774.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|440708153|ref|ZP_20888828.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734591|ref|ZP_20914203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448744704|ref|ZP_21726588.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
gi|81694717|sp|Q5HGU0.1|MUTS2_STAAC RecName: Full=MutS2 protein
gi|122539777|sp|Q2FZD3.1|MUTS2_STAA8 RecName: Full=MutS2 protein
gi|123486337|sp|Q2FHT7.1|MUTS2_STAA3 RecName: Full=MutS2 protein
gi|229486380|sp|A6QG46.1|MUTS2_STAAE RecName: Full=MutS2 protein
gi|229486381|sp|A8Z1S5.1|MUTS2_STAAT RecName: Full=MutS2 protein
gi|57285939|gb|AAW38033.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus COL]
gi|87127380|gb|ABD21894.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202403|gb|ABD30213.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374068|dbj|BAF67328.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160368127|gb|ABX29098.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860449|gb|EEV83276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|259163181|gb|EEW47741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|269940638|emb|CBI49017.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282594637|gb|EFB99621.1| MutS2 protein [Staphylococcus aureus A9765]
gi|294824934|gb|EFG41356.1| MutS2 protein [Staphylococcus aureus A9754]
gi|302750967|gb|ADL65144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340282|gb|EFM06223.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196867|gb|EFU27210.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141041|gb|EFW32888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320143098|gb|EFW34888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|329313812|gb|AEB88225.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329730765|gb|EGG67144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|364522361|gb|AEW65111.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|365167155|gb|EHM58631.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|365168596|gb|EHM59934.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|365224203|gb|EHM65468.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|365244748|gb|EHM85405.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|371978726|gb|EHO95967.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|371981854|gb|EHO99015.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|374363034|gb|AEZ37139.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|375029330|gb|EHS22658.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|375039929|gb|EHS32841.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|377697001|gb|EHT21356.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377725128|gb|EHT49243.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377742368|gb|EHT66353.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377771122|gb|EHT94880.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|383970969|gb|EID87059.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|421956381|gb|EKU08710.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|436431619|gb|ELP28972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505251|gb|ELP41179.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|445562010|gb|ELY18195.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|387780256|ref|YP_005755054.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
gi|416839782|ref|ZP_11903140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|416847321|ref|ZP_11907055.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|323440694|gb|EGA98404.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|323442363|gb|EGA99992.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|344177358|emb|CCC87824.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|260587418|ref|ZP_05853331.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|260542285|gb|EEX22854.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
Length = 792
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 279/606 (46%), Gaps = 120/606 (19%)
Query: 200 VSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEE 256
V+ +GR CI A+ G++ S GS + EP++ V LN++L++ E
Sbjct: 188 VTMRNGRYCIPVKAEHKGHVPGMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIE 247
Query: 257 DVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHE 316
+L L++ +L+ IE L + QLD + ARA + + T P
Sbjct: 248 IILSNLSQYAAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRF------------- 294
Query: 317 PVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARK 376
+ I L KA HPL+ +HK
Sbjct: 295 ---------NTKGIIDLKKARHPLI-DKHK------------------------------ 314
Query: 377 GEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMA 436
VPID+ + +LV+TGPNTGGKT+ LKT+GL +M
Sbjct: 315 ---------------------VVPIDVRLGEDFDLLVVTGPNTGGKTVSLKTIGLLTLMG 353
Query: 437 KSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLD 496
+SGLHI + + +++ F V+ADIGDEQS+ QSLSTFS H+ + I ++ SLVL D
Sbjct: 354 QSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMTNVVRFIEKADRDSLVLFD 413
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
E+GAGT+P EG AL +++L G + T+ATTH+ ELK S ENA EFD
Sbjct: 414 ELGAGTDPTEGAALAIAILSHLHAQG-IRTMATTHYSELKVYALSTHGVENASCEFDVET 472
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERF-KTQF 615
L+PTY++L G+PG+S+A I+ +LGLP ++ A++ +V+ +E+ KT
Sbjct: 473 LRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAKEQISQEDESFEDVLSTLEQSRKTIE 532
Query: 616 LEHVHEARH---FLMLSRNLHK---NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLV 669
E AR+ L + L + L + + +IL + R +++ + A +
Sbjct: 533 AEEAEIARYKTEIESLKKQLEEKQDKLEQRKERILRDANEEAHRILREAKEYADQTMKIF 592
Query: 670 HKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHP 729
+K+ ++ + A+ L KR+ +LR Q+ GK + T +++T+
Sbjct: 593 NKAGKE----SMSAKELEQKRS-ELRKKMDQT------GKKMALKTPEKKKSTL------ 635
Query: 730 ATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWI 789
KDI ++GD V V S KGT+ +K + VQ+G ++
Sbjct: 636 ------TAKDI------------SLGDAVKVLSLNVKGTISSKPDAKGMVFVQMGILRSK 677
Query: 790 MKFTDI 795
+ +D+
Sbjct: 678 VHLSDL 683
>gi|417895692|ref|ZP_12539670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
gi|341841369|gb|EGS82830.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
Length = 782
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|450046743|ref|ZP_21839126.1| putative DNA mismatch repair protein [Streptococcus mutans N34]
gi|449198456|gb|EMB99569.1| putative DNA mismatch repair protein [Streptococcus mutans N34]
Length = 776
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDLVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|418949118|ref|ZP_13501378.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
gi|375369683|gb|EHS73552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
Length = 782
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|417643505|ref|ZP_12293552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri VCU121]
gi|330685726|gb|EGG97362.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU121]
Length = 782
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 216/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 392 TFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHDELEK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K ++LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADAILKELRELRDKKGADV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 609 HELIDKKKQLD-DQYE---------AKSIKQNVQKQKYDKIQAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ EE VVQ+G +K + D+
Sbjct: 659 L-VGDEEAVVQMGILKMKLPIEDL 681
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
F G++ S+SG IEP S V +N+++ + E +L LT ++ V+ D +
Sbjct: 209 DFNGIVHDQSASGQTLYIEPSSVVEMNNQISRLHNDEAVERERILTELTSQVAVESDALL 268
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + LD + A+A Y+ + GT P E T+YLP
Sbjct: 269 LAESIMGHLDFLIAKARYARAIKGTKPTFH----------------------NERTVYLP 306
Query: 335 KAYHPLL 341
AYHPLL
Sbjct: 307 NAYHPLL 313
>gi|325979090|ref|YP_004288806.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325179018|emb|CBZ49062.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 778
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 221/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LTNPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---MAESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKIRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT+I + + QVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLIS-QGKNGKWEAQVGLIKMTLK 666
>gi|148267636|ref|YP_001246579.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH9]
gi|150393691|ref|YP_001316366.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH1]
gi|229486378|sp|A6U0W1.1|MUTS2_STAA2 RecName: Full=MutS2 protein
gi|229486379|sp|A5IS30.1|MUTS2_STAA9 RecName: Full=MutS2 protein
gi|147740705|gb|ABQ49003.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946143|gb|ABR52079.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH1]
Length = 782
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|450107385|ref|ZP_21861014.1| putative DNA mismatch repair protein [Streptococcus mutans SF14]
gi|449222080|gb|EMC21821.1| putative DNA mismatch repair protein [Streptococcus mutans SF14]
Length = 776
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 174/297 (58%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S ++ T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAAAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|253317073|ref|ZP_04840286.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|257795126|ref|ZP_05644105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|258407166|ref|ZP_05680315.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|258421743|ref|ZP_05684664.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|258432913|ref|ZP_05688602.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|258443403|ref|ZP_05691746.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|258446076|ref|ZP_05694238.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|258449811|ref|ZP_05697909.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|258454910|ref|ZP_05702873.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|269202756|ref|YP_003282025.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282894171|ref|ZP_06302402.1| MutS2 protein [Staphylococcus aureus A8117]
gi|282928666|ref|ZP_06336263.1| MutS2 protein [Staphylococcus aureus A10102]
gi|295405948|ref|ZP_06815757.1| MutS2 protein [Staphylococcus aureus A8819]
gi|296275631|ref|ZP_06858138.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MR1]
gi|297246508|ref|ZP_06930346.1| MutS2 protein [Staphylococcus aureus A8796]
gi|384864370|ref|YP_005749729.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150285|ref|YP_005741849.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|415694454|ref|ZP_11455905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|417652169|ref|ZP_12301922.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417801420|ref|ZP_12448510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|417894614|ref|ZP_12538628.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|418424284|ref|ZP_12997408.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|418427274|ref|ZP_13000288.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|418430119|ref|ZP_13003036.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433078|ref|ZP_13005860.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|418436753|ref|ZP_13008557.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|418439625|ref|ZP_13011334.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|418442676|ref|ZP_13014279.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|418445736|ref|ZP_13017214.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|418448680|ref|ZP_13020074.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|418451504|ref|ZP_13022839.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|418454561|ref|ZP_13025824.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457435|ref|ZP_13028640.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568086|ref|ZP_13132440.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|418638918|ref|ZP_13201191.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|418653778|ref|ZP_13215707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|418663441|ref|ZP_13224959.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|418877992|ref|ZP_13432227.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880818|ref|ZP_13435037.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883745|ref|ZP_13437942.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886403|ref|ZP_13440552.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418894761|ref|ZP_13448858.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418914239|ref|ZP_13468211.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920218|ref|ZP_13474151.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931206|ref|ZP_13485048.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418991004|ref|ZP_13538665.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|419785786|ref|ZP_14311533.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|424777696|ref|ZP_18204655.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|443635753|ref|ZP_21119875.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
gi|257789098|gb|EEV27438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|257841321|gb|EEV65766.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|257842076|gb|EEV66504.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|257849353|gb|EEV73330.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|257851493|gb|EEV75432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|257855134|gb|EEV78075.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|257856731|gb|EEV79634.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|257862790|gb|EEV85555.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|262075046|gb|ACY11019.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282589705|gb|EFB94791.1| MutS2 protein [Staphylococcus aureus A10102]
gi|282763657|gb|EFC03786.1| MutS2 protein [Staphylococcus aureus A8117]
gi|285816824|gb|ADC37311.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|294969383|gb|EFG45403.1| MutS2 protein [Staphylococcus aureus A8819]
gi|297176614|gb|EFH35877.1| MutS2 protein [Staphylococcus aureus A8796]
gi|312829537|emb|CBX34379.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128541|gb|EFT84546.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|329725189|gb|EGG61678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334276778|gb|EGL95028.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|341851798|gb|EGS92707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|371980768|gb|EHO97969.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|375017989|gb|EHS11584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|375019967|gb|EHS13510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|375034089|gb|EHS27264.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|377694114|gb|EHT18479.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695625|gb|EHT19985.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377715039|gb|EHT39236.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377715479|gb|EHT39669.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377723126|gb|EHT47251.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377726585|gb|EHT50696.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731711|gb|EHT55764.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377757741|gb|EHT81629.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377765577|gb|EHT89426.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|383361993|gb|EID39352.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|387719184|gb|EIK07136.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719344|gb|EIK07293.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|387720694|gb|EIK08597.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|387725944|gb|EIK13535.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|387728283|gb|EIK15776.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|387730846|gb|EIK18199.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|387736228|gb|EIK23329.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|387737623|gb|EIK24685.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|387738356|gb|EIK25400.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|387745329|gb|EIK32088.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|387746022|gb|EIK32767.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|387747993|gb|EIK34692.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346376|gb|EJU81466.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|408423364|emb|CCJ10775.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408425354|emb|CCJ12741.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408427342|emb|CCJ14705.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408429329|emb|CCJ26494.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408431317|emb|CCJ18632.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408433311|emb|CCJ20596.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408435302|emb|CCJ22562.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408437287|emb|CCJ24530.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|443408812|gb|ELS67323.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
Length = 782
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|374338716|ref|YP_005095433.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
gi|372284833|emb|CCF03137.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
Length = 778
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 221/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LIDPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A+A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKA---IAESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++ + + VQVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLVN-QGKNGKWEVQVGLIKMTLK 666
>gi|418598399|ref|ZP_13161909.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
gi|374399756|gb|EHQ70892.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
Length = 782
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRIETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-FNDEEAIVQMGIIKMKLPIEDL 681
>gi|21282756|ref|NP_645844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MW2]
gi|49485982|ref|YP_043203.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|297208218|ref|ZP_06924648.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912295|ref|ZP_07129738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|418934045|ref|ZP_13487869.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987965|ref|ZP_13535638.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|448742615|ref|ZP_21724554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
gi|38604916|sp|Q8NX56.1|MUTS2_STAAW RecName: Full=MutS2 protein
gi|56749203|sp|Q6GA70.1|MUTS2_STAAS RecName: Full=MutS2 protein
gi|21204194|dbj|BAB94892.1| MutS-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244425|emb|CAG42853.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MSSA476]
gi|296886957|gb|EFH25860.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886541|gb|EFK81743.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|377719753|gb|EHT43923.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|377771825|gb|EHT95579.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|445546653|gb|ELY14940.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
Length = 782
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|406671086|ref|ZP_11078326.1| MutS2 family protein [Facklamia hominis CCUG 36813]
gi|405581180|gb|EKB55231.1| MutS2 family protein [Facklamia hominis CCUG 36813]
Length = 784
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 226/423 (53%), Gaps = 51/423 (12%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E QV+ + HP V DI I RV++ITGPNTGGKTI LKT+GL +M ++G
Sbjct: 298 ENQVALWQARHPLVDPDQVVANDILIGETYRVMLITGPNTGGKTIVLKTIGLIQLMGQAG 357
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L + E +++ FD +FADIGDEQS+ Q+LSTFS H+ I +II +T QSL+L DE+G
Sbjct: 358 LQVPCQEGSQLGVFDQIFADIGDEQSIEQNLSTFSSHMTNIVSIIESATYQSLILFDELG 417
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
+GT+P EG AL M++L+ + G+++ +ATTH+ ELK + NA MEFD L P
Sbjct: 418 SGTDPQEGAALAMAILDHLRKIGAVI-LATTHYPELKVYGHKTPKTINAAMEFDVDSLSP 476
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TY ++ GVPGRS+A+ I+ RLGL ++ A+Q S +NE++ ++ER + +
Sbjct: 477 TYHLMIGVPGRSNALEISRRLGLDPSILDQAKQGISQDSHSLNEMVAKLERERREASTKN 536
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
+A+ L S +L +L + L A L+ K+ +Q
Sbjct: 537 QQAQDLLDQSASLLADLRTEYDRYLHQKA------------------DLIEKAKRQANEK 578
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK---VEHPATAS--- 733
++ + Q++R L + G+N + S +DK ++H A
Sbjct: 579 VAETQKQAEAILQEIR-----DLQLVQ-GQNHTIKES----VLIDKKSALDHLKQAEDLR 628
Query: 734 -SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
+ V+K K R+K VGD V V + ++GT++ ++ KE+ +VQ+G +K
Sbjct: 629 KNKVLKKAKNQRRLK------VGDDVEVLPYSQRGTIVAID--KEQYLVQMGILKMTFSE 680
Query: 793 TDI 795
D+
Sbjct: 681 ADL 683
>gi|354559953|ref|ZP_08979193.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
gi|353539467|gb|EHC08953.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
Length = 792
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 233/422 (55%), Gaps = 49/422 (11%)
Query: 387 EMQVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGL 440
+ ++ ++ HP VP++I + ++ +VITGPNTGGKT+ L+TVGL MA+SGL
Sbjct: 298 QQEIKLVQARHPLLSGSVVPLNIELGKRFDTIVITGPNTGGKTVALRTVGLLSAMAQSGL 357
Query: 441 HILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGA 500
HI + +++ F +F DIGDEQS+ QSLSTFSGH+K I +I+ + S SL+LLDEIGA
Sbjct: 358 HIPAEANSRLGIFTQIFVDIGDEQSVEQSLSTFSGHMKNIVDIVLGADSHSLILLDEIGA 417
Query: 501 GTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPT 560
GT+P EG AL MS++ E G + IATTH+G LK+ Y+ ENA +EFD L+PT
Sbjct: 418 GTDPTEGAALAMSIITELHERGCRI-IATTHYGALKSFAYNTPRVENASVEFDVETLRPT 476
Query: 561 YKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVH 620
Y++L G+PG+S+A IA RLGL V++ A+ ++ ++I +E
Sbjct: 477 YRLLIGIPGKSNAFYIASRLGLNDTVLERAKSFVTEREMQVADLIDNLE----------- 525
Query: 621 EARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSL-VHKSAQQLCPS 679
+ +++ R +R+I E RK + + A+SL + + Q+L
Sbjct: 526 ----------DTQRDIEREKRRIQEE------RKTIETESSQLKAKSLKLEEDYQELLAL 569
Query: 680 ASQARSLVHKR----AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
A + V ++ A+ L Q+L + K+QH + Q +++ + +
Sbjct: 570 AQDEATEVLRQTRHEAELLIEDLKQAL--KEENKDQHAIEHARQ-----RIKKLSNKVGT 622
Query: 736 VVKDIKQSP--RVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
K+I+ S + E+ +G ++++ +KG V+K+ E++VQVG MK ++ +
Sbjct: 623 KEKEIRTSAGGGINPEEI-KLGQTLYLTKLRQKGHVLKLPTDNGEVLVQVGVMKLNVQLS 681
Query: 794 DI 795
++
Sbjct: 682 EV 683
>gi|15924134|ref|NP_371668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926728|ref|NP_374261.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus N315]
gi|156979466|ref|YP_001441725.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005930|ref|ZP_05144531.2| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|54037877|sp|P65496.1|MUTS2_STAAN RecName: Full=MutS2 protein
gi|54041518|sp|P65495.1|MUTS2_STAAM RecName: Full=MutS2 protein
gi|229486377|sp|A7X169.1|MUTS2_STAA1 RecName: Full=MutS2 protein
gi|13700944|dbj|BAB42240.1| MutS-like protein [Staphylococcus aureus subsp. aureus N315]
gi|14246914|dbj|BAB57306.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721601|dbj|BAF78018.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 782
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|339007645|ref|ZP_08640219.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
gi|338774848|gb|EGP34377.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
Length = 785
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 216/397 (54%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + +V+TGPNTGGKT+ +KT+GL +M +GLHI + E ++ F S+FA
Sbjct: 317 VPLDVELGKGYTGIVVTGPNTGGKTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS HL I I+ Q +SLVL DE+GAGT+P EG AL MS+L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHLTNIIRILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHV 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ L +ATTH+ ELK Y NA +EFD L+PTY++L GVPGRS+A IA
Sbjct: 437 LAKGARL-VATTHYSELKAYAYDTPEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIAS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ AR+ ++ ++I +E K + +A + R + L +
Sbjct: 496 RLGLNEQIIDKARRSVSKEENQVEKMIASLESNKKTAEKEREDAENI----RKQAEELRQ 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ H A + R ++K + A +A L + A+ + R L R + +
Sbjct: 552 QLEEERRHFAEAKNRLLEKAEEEARVAVQLASEEAEVII------RELRQMRKEGVDFKE 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ + K L + + +KV+ PA A V+ T++ +GD V
Sbjct: 606 HRLIDAKK------RLGNAVLELEKEKVKKPAKA-------------VRATQI-KIGDEV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V SFG+KGTV+ + S E +VQ+G +K +K D+
Sbjct: 646 MVDSFGQKGTVLD-KVSSTEYLVQLGIIKMKVKKDDM 681
>gi|94995016|ref|YP_603114.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
gi|94548524|gb|ABF38570.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
Length = 818
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|449995959|ref|ZP_21823277.1| putative DNA mismatch repair protein [Streptococcus mutans A9]
gi|449183955|gb|EMB85922.1| putative DNA mismatch repair protein [Streptococcus mutans A9]
Length = 776
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKDLQDKAQLKP 594
>gi|322386149|ref|ZP_08059783.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
gi|321269841|gb|EFX52767.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
Length = 780
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 218/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 297 EQDIQLLSVRHPLIENAVANDLHFGPDLTAIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 356
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 357 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 416
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 417 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIEMDWVENASMEFDTDSLRPTY 475
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 476 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 527
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V + L S S
Sbjct: 528 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIVDMA---LAESES 584
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
++L K + L+P ++ + Q + P T S K ++
Sbjct: 585 ILKNLHDKSS--LKP--------------HEIIEAKAQLKKL----APETVDLSKNKVLQ 624
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 625 QA---KKNRAPKVGDDILVTSYGQRGTLVK 651
>gi|408789877|ref|ZP_11201518.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
gi|408520899|gb|EKK20921.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
Length = 785
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 221/386 (57%), Gaps = 31/386 (8%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I + + R L+ITGPNTGGKTI +KT+GL +MA+SGL I + E ++V FD VFADIGD
Sbjct: 321 IELNQDCRQLIITGPNTGGKTITMKTLGLLQLMAQSGLFIAADEGSQVGVFDEVFADIGD 380
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ Q+LSTFS HL I I+ Q+T++SLVL+DE+GAGT+P EG AL M++L+A
Sbjct: 381 EQSIEQNLSTFSSHLDNIIQILQQTTARSLVLIDELGAGTDPSEGAALAMAILDAIERLH 440
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
S + +ATTH+ ELK Y++ ENA MEFDE L+PTY++L GVPG+S+A+ IA RLGL
Sbjct: 441 STV-LATTHYPELKAYAYNHVATENASMEFDEETLRPTYRLLMGVPGQSNALQIARRLGL 499
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
+V A ++N +I E+ TQ HE L+ L K +++
Sbjct: 500 SEQIVNQATAYTDETDQDLNRMITEL----TQQTRLAHE--RSTQLAEKL-KATTELQQE 552
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 702
+ +H + ++ Q ++ A A LV K+ ++ A +H++ + L+ ++
Sbjct: 553 LQDHFGQFQAQREQLVNQAKREANQLVTKTKRE----AQAVIDDLHQKQRDLQGGVKENE 608
Query: 703 HCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSS 762
GK L + QQ PA + V+K R K + VGD V V +
Sbjct: 609 IIADQGK----LNALEQQ--------PALRKNRVLK------RSKAKQTLRVGDDVLVKN 650
Query: 763 FGKKGTVIKVEPSKEEIVVQVGNMKW 788
+G++G +++ + ++ VQ+G +K
Sbjct: 651 YGQQGVLLR-KLGQQNWEVQLGILKM 675
>gi|418028172|ref|ZP_12666754.1| MutS [Streptococcus thermophilus CNCM I-1630]
gi|354687972|gb|EHE88023.1| MutS [Streptococcus thermophilus CNCM I-1630]
Length = 783
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 215/379 (56%), Gaps = 41/379 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHEARHFLMLSRN 631
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ + N
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKDVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQARSLVHKR 690
L N R +K+ + + ++++K K Q++ +A +++ S++
Sbjct: 540 LKFN--RAVKKLYNEFSHEYDKELEK-----------AQKEIQEMVDTALAESDSIL--- 583
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
++LH K V+ + + + A S K ++++ + K T
Sbjct: 584 ---------KNLHDKSQLKPHEVIDAKGKLKKL-----AAQVDLSKNKVLRKAKKEKATR 629
Query: 751 LPNVGDLVHVSSFGKKGTV 769
P VGD + V+++G++GT+
Sbjct: 630 APRVGDDIIVTAYGQRGTL 648
>gi|386830679|ref|YP_006237333.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|385196071|emb|CCG15689.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
Length = 782
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|94993083|ref|YP_601182.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS2096]
gi|94546591|gb|ABF36638.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS2096]
Length = 818
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|332637213|ref|ZP_08416076.1| DNA mismatch repair protein MutS2 [Weissella cibaria KACC 11862]
Length = 792
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 233/431 (54%), Gaps = 40/431 (9%)
Query: 373 AARKGEKDTNLSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTIC 425
AA ++ SP E V L+ HP V DI I + +++TGPNTGGKTI
Sbjct: 286 AAATKAQEPEYSP-ENHVRLLQARHPLLDPQKAVANDIIIGEDYKAIIVTGPNTGGKTIT 344
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKT+GL +MA+SGL I ++EY+ V F VFADIGDEQS+ QSLSTFS H+ I +I+
Sbjct: 345 LKTLGLLQLMAQSGLFIPTAEYSTVGLFKEVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
Q + SLVL DE+GAGT+P EG AL MS+L+A GS T+ATTH+ ELK Y+
Sbjct: 405 QIDADSLVLFDELGAGTDPQEGAALAMSILDAVGAKGS-YTVATTHYPELKVYGYNRVDT 463
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
NA MEFD L+PTYK L G+PGRS+A+ I++RLGL ++ A L S E+N++I
Sbjct: 464 INASMEFDVDTLRPTYKFLLGIPGRSNALEISKRLGLDQSIIDAAASLTSEDSQELNDMI 523
Query: 606 IEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIA 665
++ + L + ++ +R + + + LE +++ R +++ A
Sbjct: 524 ADLVERRNAVLAQQVQLAQQVIENRQMKNDY----EQKLEKMETEKARTLEEAKKEANHI 579
Query: 666 RSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK 725
+ K A ++ + R QL A + K+ + L + Q+
Sbjct: 580 VADSRKKADKI---------IADLRKMQLDGVAVKE---NKLMDAKGALNAMRQE----- 622
Query: 726 VEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVG 784
P+ ++ V++ KQ+ +++ GD V V +G++GTV K++ K E VQ+G
Sbjct: 623 ---PSAENNRVLRKAKQA----KSQDIAAGDTVLVREYGQQGTVKRKLKDGKFE--VQMG 673
Query: 785 NMKWIMKFTDI 795
+K ++ +I
Sbjct: 674 ILKMVLAEDEI 684
>gi|319651779|ref|ZP_08005905.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
gi|317396598|gb|EFV77310.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
Length = 785
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 175/285 (61%), Gaps = 8/285 (2%)
Query: 390 VSALELAHP-VPIDIFIARKTRV------LVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+S + HP +PID +A ++ +VITGPNTGGKT+ LKTVGL +MA++GL I
Sbjct: 302 ISLFKARHPLIPIDEVVANDIKLGAEYSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQI 361
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ + ++ F +V+ADIGDEQS+ QSLSTFS H+ I +I+ Q SLVL DE+GAGT
Sbjct: 362 PALDGSETAVFGNVYADIGDEQSIEQSLSTFSSHMVNIVDILDQVDFNSLVLFDELGAGT 421
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+L+ + G+ + IATTH+ ELK Y+ + NA +EFD L PTYK
Sbjct: 422 DPQEGAALAISILDEVYKRGARV-IATTHYPELKAYGYNREGVINASVEFDIETLSPTYK 480
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L GVPGRS+A I++RLGL V++ AR GA + ++ +I +E + Q + EA
Sbjct: 481 LLIGVPGRSNAFEISKRLGLKDQVIETARSYIGADTNQVENMIASLEESRRQAEADMEEA 540
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARS 667
FL + LHK+L + + E + + ++ D A++
Sbjct: 541 NDFLKSAEKLHKDLQKQMAEFYEEKDAMHEKAAERAEDIVEKAKA 585
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 145/331 (43%), Gaps = 67/331 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGSC 112
L++LE++K+ + +SLGR+ + S + Y++ +R +ET+ A+ + + G+
Sbjct: 6 LKILEFNKVKEQLLEHVSSSLGRKKAINIRPSTD--YEEVIRRQEETDEAVTVLRIKGNV 63
Query: 113 SLD-----------------LTGVDLSLVKSAI---REVRRASPLRPNEALAVVALLQFS 152
L L+ +L+ + S I R+++R E ++ LL ++
Sbjct: 64 PLGGIFDIRPHVKRAVIGGMLSPQELNQISSTIHASRQMKRFIEEFAEEESSLPILLGYT 123
Query: 153 ET------LQLSLRAAIKEDADLY---------IRFMPLTQ--MLYQLMDMLIRNENNES 195
+ L+ S+R A+ ++ ++ +R T+ + + ++ +IR+ + +
Sbjct: 124 DKIIVLADLETSIRNAVDDNGEVLDSASETLRSLRNQLRTKESRVRERLESMIRSTSAQK 183
Query: 196 LFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARAS 250
+ + ++ + R I + G ++ SSSG IEP S V LN+ELQ R
Sbjct: 184 MLSDAIITIRNDRFVIPVKQEYRGHYGGIIHDQSSSGQTLFIEPASIVQLNNELQGIRVK 243
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ E +L+AL+ + + E+E ++ + ++D + A+A YS + P I
Sbjct: 244 EQQEIERILIALSVQAAENSSELETIVEVLGEIDFMFAKARYSKRIKASKPKI------- 296
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLL 341
E I L KA HPL+
Sbjct: 297 ---------------NNEGIISLFKARHPLI 312
>gi|71904211|ref|YP_281014.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
gi|71803306|gb|AAX72659.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length = 818
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|383480531|ref|YP_005389425.1| recombination inhibitory protein MutS [Streptococcus pyogenes
MGAS15252]
gi|383494512|ref|YP_005412188.1| recombination inhibitory protein MutS [Streptococcus pyogenes
MGAS1882]
gi|378928521|gb|AFC66727.1| recombination inhibitory protein MutS [Streptococcus pyogenes
MGAS15252]
gi|378930239|gb|AFC68656.1| recombination inhibitory protein MutS [Streptococcus pyogenes
MGAS1882]
Length = 779
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|449907982|ref|ZP_21793419.1| putative DNA mismatch repair protein [Streptococcus mutans OMZ175]
gi|450089250|ref|ZP_21855118.1| putative DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|450128128|ref|ZP_21868894.1| putative DNA mismatch repair protein [Streptococcus mutans U2A]
gi|449215833|gb|EMC16006.1| putative DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449229885|gb|EMC29173.1| putative DNA mismatch repair protein [Streptococcus mutans U2A]
gi|449263244|gb|EMC60673.1| putative DNA mismatch repair protein [Streptococcus mutans OMZ175]
Length = 776
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEVSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENFKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|417856187|ref|ZP_12501246.1| DNA mismatch repair protein mutS [Streptococcus pyogenes HKU
QMH11M0907901]
gi|387933142|gb|EIK41255.1| DNA mismatch repair protein mutS [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 779
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|15675664|ref|NP_269838.1| DNA mismatch repair protein [Streptococcus pyogenes SF370]
gi|71911374|ref|YP_282924.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|410681228|ref|YP_006933630.1| mutS2 family protein [Streptococcus pyogenes A20]
gi|81782448|sp|Q99Y73.1|MUTS2_STRP1 RecName: Full=MutS2 protein
gi|13622877|gb|AAK34559.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1
GAS]
gi|71854156|gb|AAZ52179.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|395454616|dbj|BAM30955.1| DNA mismatch repair protein [Streptococcus pyogenes M1 476]
gi|409693817|gb|AFV38677.1| mutS2 family protein [Streptococcus pyogenes A20]
Length = 779
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|357054690|ref|ZP_09115771.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
gi|355383994|gb|EHG31065.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
Length = 812
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 219/397 (55%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI++++ R+ +L++TGPNTGGKT+ LKTVGL +M +SGLHI + E +++ FD VFA
Sbjct: 324 VPINVWLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAVFDQVFA 383
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+S++ S+SL L DE+GAGT+P EG AL +++L +F
Sbjct: 384 DIGDEQSIEQSLSTFSAHMTNIVRILSEADSRSLCLFDELGAGTDPTEGAALAIAIL-SF 442
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ T+ATTH+ ELK S ENAC EF+ L+PTY++L G+PG+S+A I++
Sbjct: 443 LHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQ 502
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLPG ++ +A+ A +++ +E + + E + +L L +
Sbjct: 503 KLGLPGYIIDDAKSHLEAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKTRLTQ 562
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ E RK + + +A A+ ++ +A+ + +Q+ A
Sbjct: 563 KEERLDE-------RKDKILKNATEEAQRILR-----------EAKETADQTIKQINKLA 604
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ S ++ + L ++T P S + SP+ + +GD V
Sbjct: 605 ASSGMGKELEAERARLRDQLKKTDEKLAVKPKGPSQPI------SPKKLK-----IGDGV 653
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 654 KVLSMNLKGTVSTLPNAKGDLYVQMGILRSLVNIRDL 690
>gi|417922412|ref|ZP_12565900.1| MutS2 family protein [Streptococcus cristatus ATCC 51100]
gi|342832509|gb|EGU66804.1| MutS2 family protein [Streptococcus cristatus ATCC 51100]
Length = 778
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 218/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 295 EQDIQLLSVRHPLIENAVANDLHFGPDLTAIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 354
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 355 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 414
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 415 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIEMDWVENASMEFDTDSLRPTY 473
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 474 RFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 525
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V + L S S
Sbjct: 526 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIVDMA---LAESES 582
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
++L K + L+P ++ + Q + P T S K ++
Sbjct: 583 ILKNLHDKSS--LKP--------------HEIIEAKAQLKKL----APETVDLSKNKVLQ 622
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 623 QA---KKNRAPKVGDDILVTSYGQRGTLVK 649
>gi|21911124|ref|NP_665392.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS315]
gi|50914919|ref|YP_060891.1| hypothetical protein M6_Spy1573 [Streptococcus pyogenes MGAS10394]
gi|21905334|gb|AAM80195.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS315]
gi|50903993|gb|AAT87708.1| MutS [Streptococcus pyogenes MGAS10394]
Length = 818
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|418655590|ref|ZP_13217441.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
gi|375036341|gb|EHS29416.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
Length = 782
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKYSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|423071359|ref|ZP_17060133.1| MutS2 protein [Streptococcus intermedius F0413]
gi|355363833|gb|EHG11568.1| MutS2 protein [Streptococcus intermedius F0413]
Length = 777
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 215/389 (55%), Gaps = 44/389 (11%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L + HP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVTHPLIENAVANDLYFASDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
++V FD +FADIGDEQS+ QSLSTFS H+ I I+ Q +LVLLDE+GAGT+P
Sbjct: 357 DNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQVDENALVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A+ IA RLGL +VV++A++ S ++N +I ER + Q LE +
Sbjct: 476 QGVPGRSNALEIARRLGLSELVVRHAQEQTNTDS-DVNRII---ERLEEQTLESRKRLDN 531
Query: 625 FLMLSR-NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA-SQ 682
+ + NL N R +K+ +R ++ K AQ++ A S+
Sbjct: 532 IREVEQENLKFN--RALKKLYNEFNRERETELNK-----------ARLEAQEIVDLALSE 578
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ S++ ++LH K ++ + Q + P T S K +KQ
Sbjct: 579 SESIL------------KNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQ 622
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
+ K+ P VGD + V+S+G++GT++K
Sbjct: 623 A---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|28895191|ref|NP_801541.1| DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
gi|28810436|dbj|BAC63374.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length = 782
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 310 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 430 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 489 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 542
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 543 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 589
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 590 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 630
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 631 ARAPRIGDDIIVTSYGQRGTL 651
>gi|449894229|ref|ZP_21789133.1| putative DNA mismatch repair protein [Streptococcus mutans SF12]
gi|450063269|ref|ZP_21844807.1| putative DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|449204905|gb|EMC05682.1| putative DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|449255468|gb|EMC53322.1| putative DNA mismatch repair protein [Streptococcus mutans SF12]
Length = 776
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENFKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|56808628|ref|ZP_00366355.1| COG1193: Mismatch repair ATPase (MutS family) [Streptococcus
pyogenes M49 591]
Length = 779
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|336065010|ref|YP_004559869.1| DNA mismatch repair protein MutS2 [Streptococcus pasteurianus ATCC
43144]
gi|334283210|dbj|BAK30783.1| DNA mismatch repair protein MutS2 [Streptococcus pasteurianus ATCC
43144]
Length = 778
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 220/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LTDPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNRIIERLE-------EQTHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKARAKAQEIVDKA---MTESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++ + + VQVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLVN-QGKNGKWEVQVGLIKMTLK 666
>gi|253731756|ref|ZP_04865921.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724485|gb|EES93214.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 782
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
+ G EINE+I +E R +TQ L E + + +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLEHNYKRVETQRL----ELDRLVKEAEQVHDDLSK--------- 557
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR + ++
Sbjct: 558 QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHEL 611
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+ L +++ K IKQ+ + ++ + GD V V S+G+KG
Sbjct: 612 IDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ + EE +VQ+G +K + D+
Sbjct: 655 EVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|19746770|ref|NP_607906.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS8232]
gi|81763122|sp|Q8NZI5.1|MUTS2_STRP8 RecName: Full=MutS2 protein
gi|19749002|gb|AAL98405.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS8232]
Length = 779
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|417796292|ref|ZP_12443507.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443640481|ref|ZP_21124470.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
gi|334269791|gb|EGL88204.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443405162|gb|ELS63772.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
Length = 782
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
+ G EINE+I +E R +TQ L E + + +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLEHNYKRVETQRL----ELDRLVKEAEQVHDDLSK--------- 557
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR + ++
Sbjct: 558 QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHEL 611
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+ L +++ K IKQ+ + ++ + GD V V S+G+KG
Sbjct: 612 IDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ + EE +VQ+G +K + D+
Sbjct: 655 EVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|418644704|ref|ZP_13206844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
gi|375025107|gb|EHS18517.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
Length = 781
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
+ G EINE+I +E R +TQ L E + + +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLEHNYKRVETQRL----ELDRLVKEAEQVHDDLSK--------- 557
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR + ++
Sbjct: 558 QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHEL 611
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+ L +++ K IKQ+ + ++ + GD V V S+G+KG
Sbjct: 612 IDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ + EE +VQ+G +K + D+
Sbjct: 655 EVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|139473165|ref|YP_001127880.1| DNA mismatch repair protein [Streptococcus pyogenes str. Manfredo]
gi|229486383|sp|A2RCQ8.1|MUTS2_STRPG RecName: Full=MutS2 protein
gi|134271411|emb|CAM29631.1| putative DNA mismatch repair protein [Streptococcus pyogenes str.
Manfredo]
Length = 779
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|209559931|ref|YP_002286403.1| DNA mismatch repair protein [Streptococcus pyogenes NZ131]
gi|238058940|sp|B5XI46.1|MUTS2_STRPZ RecName: Full=MutS2 protein
gi|209541132|gb|ACI61708.1| Putative DNA mismatch repair protein [Streptococcus pyogenes NZ131]
Length = 779
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
>gi|422340227|ref|ZP_16421180.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355369878|gb|EHG17268.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 778
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 228/420 (54%), Gaps = 45/420 (10%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRK--ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
+ E F+ L + R +++ I+E ++ I +S ++ +
Sbjct: 532 EMRE--RFVRLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKM 576
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ ++A +LV ++++ ++ KN ++L++ ++ VE
Sbjct: 577 MNEMRAKASALV----ERIQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE-------- 624
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VVK IK K GD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 625 VVKKIKTKVDFK------AGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 163 IKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRT 211
IK+DA L +R + L + + ++M I+ + E LF E ++ GR+
Sbjct: 143 IKDDASLDLRDIRLHK---KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPV 198
Query: 212 GADQLSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
D FKGL+ SSSG IEPLS V LN+++++ + +LL + E
Sbjct: 199 KYD---FKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAEL 255
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYS 293
++ + D+I + ++ LD++NA++ Y+
Sbjct: 256 LRNNKDDILTIGEKVMYLDILNAKSIYA 283
>gi|418316581|ref|ZP_12928018.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
gi|365240860|gb|EHM81619.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
Length = 782
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
+ G EINE+I +E R +TQ L E + + +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLEHNYKRVETQRL----ELDRLVKEAEQVHDDLSK--------- 557
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR + ++
Sbjct: 558 QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHEL 611
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+ L +++ K IKQ+ + ++ + GD V V S+G+KG
Sbjct: 612 IDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ + EE +VQ+G +K + D+
Sbjct: 655 EVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|421150022|ref|ZP_15609678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|394329412|gb|EJE55514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
Length = 782
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
+ G EINE+I +E R +TQ L E + + +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLEHNYKRVETQRL----ELDRLVKEAEQVHDDLSK--------- 557
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 707
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR + ++
Sbjct: 558 QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHEL 611
Query: 708 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 767
+ L +++ K IKQ+ + ++ + GD V V S+G+KG
Sbjct: 612 IDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKG 654
Query: 768 TVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ + EE +VQ+G +K + D+
Sbjct: 655 EVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|406659764|ref|ZP_11067902.1| DNA mismatch repair protein MutS [Streptococcus iniae 9117]
gi|405577873|gb|EKB52021.1| DNA mismatch repair protein MutS [Streptococcus iniae 9117]
Length = 778
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 226/398 (56%), Gaps = 39/398 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PVP D+ V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ + + + F+
Sbjct: 307 LENPVPNDLHFKEDLAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADKGSSIAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++++ + SLVL DE+GAGT+P EG +L M++
Sbjct: 367 GIFADIGDEQSIEQSLSTFSSHMTHIVAILNEADADSLVLFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + ++ T+ATTH+ ELK F ENA MEFD LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAFVENASMEFDTTSLKPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL +V A+++ +++N +I E+ + Q L+ H +++ +
Sbjct: 486 EIARRLGLAQHIVNQAQEMT-TTDSDVNRII---EKLEAQTLDSRKRLEHI----KDIEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ ++ R + + K +++ A+ A+ +V + + + S +H++A +L
Sbjct: 538 DNVKFNRAVKKLYNEFSLAKDKEMEKASLEAKEIVDLA----LAESEEILSHLHEKA-EL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P + K Q V + + V +KQ+ K+ +
Sbjct: 593 KP---HEIIEAKTKLKQLVPEVDLSKNKV----------------LKQA---KKARAARI 630
Query: 755 GDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT+I +V+ +K E QVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLIAQVKGNKWE--AQVGLIKMTLK 666
>gi|42783724|ref|NP_980971.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus ATCC 10987]
gi|81699646|sp|Q72ZJ0.1|MUTS2_BACC1 RecName: Full=MutS2 protein
gi|42739654|gb|AAS43579.1| MutS2 family protein [Bacillus cereus ATCC 10987]
Length = 786
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +D+
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESDM 683
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + DL I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVDLPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|379020851|ref|YP_005297513.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
gi|359830160|gb|AEV78138.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
Length = 717
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 221/391 (56%), Gaps = 48/391 (12%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEME----RFKTQFLE---HVHEARHFLMLSRNLHKNLLRTRRKIL 644
+ G EINE+I +E R +TQ LE V EA +H +L +
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQ-------VHDDLSK------ 557
Query: 645 EHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHC 704
Q+F+ +K ++ K+ Q++ + +A ++ K +QLR +
Sbjct: 558 ---QYQQFQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKE 608
Query: 705 TKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFG 764
++ + L +++ K IKQ+ + ++ + GD V V S+G
Sbjct: 609 HELIDKKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 765 KKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+KG V+++ + EE +VQ+G +K + D+
Sbjct: 652 QKGEVLEI-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|384182359|ref|YP_005568121.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324328443|gb|ADY23703.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 786
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +D+
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESDM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|254302123|ref|ZP_04969481.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322315|gb|EDK87565.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 778
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 228/420 (54%), Gaps = 45/420 (10%)
Query: 386 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 437
S ++ +LE A HP VP+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNREILSLEKARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 438 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 497
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDE 413
Query: 498 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 557
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 558 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
PTY++L G+PG S+A+ IA+R+GLP ++ AR + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYISEDNKKV-EKMIENIKTKSQELD 531
Query: 618 HVHEARHFLMLSRNLHKNLLRTRRK--ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
+ E F+ L + R +++ I+E ++ I +S ++ +
Sbjct: 532 EMRE--RFVRLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKM 576
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ ++A +LV ++++ ++ KN ++L++ ++ VE
Sbjct: 577 MNEMRAKASALV----ERIQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE-------- 624
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
VVK IK K GD V V S + ++K+ SKE VQ G +K + F +I
Sbjct: 625 VVKKIKTKVDFK------AGDRVFVKSINQFANILKINTSKESASVQAGILKLEVPFDEI 678
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 29/191 (15%)
Query: 123 LVKSAIREVRRASPLRPNEALAVVALLQFSETL---QLSLRAAIKEDADLYIRFMPLTQM 179
+ KS + E+ + LR E + + L+ E + ++L IK+DA L +R + L +
Sbjct: 102 IFKSRLDELGKYKQLR--ETIGNIPNLRVIEDVINKTINLEKEIKDDASLDLRDIRLHK- 158
Query: 180 LYQLMDMLIRNENNESLFLE-----------VSSIHGRLCIRTGADQLSFKGLL------ 222
+ ++M I+ + E LF E ++ GR+ D FKGL+
Sbjct: 159 --KTLNMNIKRKF-EELFEEPSLSNAFQEKIITERDGRMVTPVKYD---FKGLIKGIEHD 212
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
SSSG IEPLS V LN+++++ + +LL + E ++ + ++I + ++
Sbjct: 213 RSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKILLRIAELLRNNKEDILTIGEKVMY 272
Query: 283 LDVVNARATYS 293
LD++NA++ Y+
Sbjct: 273 LDILNAKSIYA 283
>gi|402555327|ref|YP_006596598.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
gi|401796537|gb|AFQ10396.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
Length = 786
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +D+
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESDM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|210623508|ref|ZP_03293853.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
gi|210153566|gb|EEA84572.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
Length = 793
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 219/405 (54%), Gaps = 57/405 (14%)
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I++ + LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D++FADIGD
Sbjct: 323 IYLGDEFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADFGSSMCVYDNIFADIGD 382
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ QSLSTFS H+ +I +I+ + T SLV+ DE+GAGT+P+EG AL +++LE +G
Sbjct: 383 EQSIEQSLSTFSSHMTRIVSILDKVTEDSLVIFDELGAGTDPVEGAALAIAILEDVRMAG 442
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ IATTH+ ELK + ENA +EFD L PTY++L GVPG+S+A I+++LGL
Sbjct: 443 A-KCIATTHYSELKNYALTKKGVENAAVEFDVETLSPTYRLLIGVPGKSNAFEISKKLGL 501
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHF---LMLSRNLH----KN 635
V+ A++ + E+ +++ +E+ + + E EA + + R+ +
Sbjct: 502 SEFVINRAKEFINTENIELEDLLQNVEKNRIKAEEDRAEAEKLKTEIQMIRDAEAEKLEK 561
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA---- 691
L + K++E S+ F S+ ++ +++ + R L +RA
Sbjct: 562 LTNQKEKMMERARSEAF--------------SITRQAKEEVDEIIKRLRELEQERASKEK 607
Query: 692 ----QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
+QLR + S+ Q TV + P AS +K++K
Sbjct: 608 NRQIEQLRKELTDSMGSL--------------QPTVKSMIVPKVASKE-IKNLK------ 646
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
VG+ V V + ++GTV+ + K+E VVQ+G MK + +
Sbjct: 647 ------VGEDVKVITLNQEGTVVSADDKKKEAVVQIGIMKMTLPY 685
>gi|335356987|ref|ZP_08548857.1| DNA mismatch repair protein [Lactobacillus animalis KCTC 3501]
Length = 786
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 211/762 (27%), Positives = 341/762 (44%), Gaps = 148/762 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
+SL +LE+DK+ + A T +G+ + +L + ++LL + A ++ G
Sbjct: 4 KSLAILEYDKIKQKLFQHATTEMGKR-QVKRLRPSTDLDEIQVKLLQTKDGADILRLKGG 62
Query: 112 CSL-----------------DLTGVDLSLVKSAIR---EVRRASPLRPNEALAVVALLQF 151
+ L G +L+ + +R EV R +E + + L +
Sbjct: 63 VPVPQLTLITDHLKRLEIGATLNGKELAEISQVLRSANEVHRFFMALADEKVELNYLYEL 122
Query: 152 SETL----QLSLRAAIKEDADLYIRFMP---LTQMLYQL--MDMLIRNE------NNESL 196
E L QL+ R + +AD Y+ L + Q+ + IRN N +
Sbjct: 123 EEQLETLPQLAKRLQVSLEADGYVTDDASSLLRSLRRQISTTEATIRNRLVALTRGNNAK 182
Query: 197 FLEVSSI---HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARAS 250
+L +++ + R I A+ F G++ SSSG IEP V LN+ L+Q + +
Sbjct: 183 YLSGANVTIRNDRYVIPVRAEHKGKFGGIVHDQSSSGQTYFIEPREIVELNNRLKQEQVA 242
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ +L L+E+ E+ + + D +NA+A Y+ T P + +D
Sbjct: 243 EKEEILRILRELSEETMPYTAELAHDAKILGEFDFINAKAKYAKELKATQPLLSEQKD-- 300
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYG 370
IYL + +HPL
Sbjct: 301 --------------------IYLRQVWHPL------------------------------ 310
Query: 371 GNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVG 430
LE+ V DI + + + +VITGPNTGGKTI LKT+G
Sbjct: 311 ----------------------LEMDKAVKNDIILGKDYQAMVITGPNTGGKTITLKTLG 348
Query: 431 LAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ 490
L MM +SGL I + E +++ F +FADIGDEQS+ QSLSTFS H+ I NI+
Sbjct: 349 LVQMMGQSGLFIPAFENSRIGVFKDIFADIGDEQSIEQSLSTFSSHMTNIVNILEHVDQD 408
Query: 491 SLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACM 550
SLVL DE+GAGT+P EG AL +++L+A SG+ + +ATTH+ ELKT + NA M
Sbjct: 409 SLVLFDELGAGTDPQEGAALAIAILDAIGASGAYV-LATTHYPELKTYGFERTQTINASM 467
Query: 551 EFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER 610
EF+E L+PTY++L G+PG+S+A NI+ERLGL +V AR L S ++N +I ++
Sbjct: 468 EFNEETLRPTYRLLIGIPGQSNAFNISERLGLSQTIVAAARNLVAKDSQDLNNMIADLVA 527
Query: 611 FKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRF-RKVQKISDAAAIARSLV 669
+ Q E + L ++ LH +L A +RF + +++ D A
Sbjct: 528 KRRQAEEEAISLQANLDEAQKLHHDLA---------TAYERFVNEREQMQDQA------- 571
Query: 670 HKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHP 729
+ A ++ A Q + + L+ +A T++ +N+ + K +
Sbjct: 572 KQKANEIVEQAKQKADEIIGELRALKQNA-----ATEIKENELIDA---------KAQLN 617
Query: 730 ATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
A +K K R KR + D V V+S+G++G +++
Sbjct: 618 ALEQKRALKKNKVLKRAKRKQAFKPNDDVMVTSYGQRGVLVQ 659
>gi|450181206|ref|ZP_21887687.1| putative DNA mismatch repair protein [Streptococcus mutans 24]
gi|449247020|gb|EMC45311.1| putative DNA mismatch repair protein [Streptococcus mutans 24]
Length = 776
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSKIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENFKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|450083246|ref|ZP_21852813.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
N66]
gi|449213679|gb|EMC14009.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
N66]
Length = 776
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENFKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|450133925|ref|ZP_21870859.1| putative DNA mismatch repair protein [Streptococcus mutans NLML8]
gi|449150275|gb|EMB54046.1| putative DNA mismatch repair protein [Streptococcus mutans NLML8]
Length = 776
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGTTQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|448821778|ref|YP_007414940.1| MutS2 protein [Lactobacillus plantarum ZJ316]
gi|448275275|gb|AGE39794.1| MutS2 protein [Lactobacillus plantarum ZJ316]
Length = 787
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 295/593 (49%), Gaps = 109/593 (18%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I A+ S F G++ S+SG IEP + + +ND L+Q + + + E+ +L AL
Sbjct: 197 RYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEAL 256
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + DEI + D +NA+A Y+ DMK + EP S
Sbjct: 257 SNLIAPYQDEIINNAAILGHFDFINAKARYA-------------HDMKAT---EPAVSPK 300
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+ +YL +A HPL
Sbjct: 301 NE------VYLRQARHPL------------------------------------------ 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ P ++ V DI + + +VITGPNTGGKTI LKT+GL +MA+SGL I
Sbjct: 313 IDPRKV----------VANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFI 362
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++V ++ +FADIGDEQS+ Q+LSTFS H++ I + ++Q + SLVL+DE+GAGT
Sbjct: 363 PVEVGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGT 422
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKPTY+
Sbjct: 423 DPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYR 481
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PGRS+A++IA+RLG+P +V AR L S ++N +I ++ + Q +
Sbjct: 482 LLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHL 541
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ + S LH+ L E A Q+ RK Q I DA A ++V + S ++
Sbjct: 542 KTQVADSEKLHRQLKS------EFNAYQQ-RKDQLIEDAKVQANTIVEQ-------SKTK 587
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
A +++ ++ S + ++ ++ + L + QQ P + V++
Sbjct: 588 ADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQ--------PKLKKNRVLR---- 635
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
R K + GD V V S+G++G +++ + K E VQ+G +K MK +D+
Sbjct: 636 --RAKAQHDFHEGDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILK--MKISDV 683
>gi|227544199|ref|ZP_03974248.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|338204121|ref|YP_004650266.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
gi|227185835|gb|EEI65906.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|336449361|gb|AEI57976.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
Length = 791
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 219/411 (53%), Gaps = 50/411 (12%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E VS + HP V DI I + ++ITGPNTGGKTI LKT+G+ +M +SG
Sbjct: 298 ENHVSLRKARHPLIDPQRVVTNDIKIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSG 357
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L I + E + + FD+VFADIGDEQSL Q+LSTFSGH+ + I+ Q TS+SLVLLDE+G
Sbjct: 358 LFIPAEEGSTIGIFDNVFADIGDEQSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELG 417
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL M++L+ G+++ I TTH+ ELK Y NA MEFD+ LKP
Sbjct: 418 AGTDPKEGAALAMAILDNIGSKGTMVVI-TTHYPELKVYGYDRAKTINASMEFDQETLKP 476
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TYK+L G+PGRS+ + IA+RLG+ V+ AR S ++N +I ++ + + E
Sbjct: 477 TYKLLLGIPGRSNGLEIAQRLGISPQVIDEARTFVSDNSQDLNNMIGDLVEQRKKAREES 536
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
+ + + + ++L K L QR + ++ ARS K+ Q+ +
Sbjct: 537 EKLAKLVAKNEKVQRDL----DKKLTRFNEQRDKLYEQ-------ARS---KANHQVSMA 582
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVG--KNQHVLTSNFQQTTVDKVEHPATASSSVV 737
+A ++H Q L + G K ++ + Q + ++P +SV+
Sbjct: 583 KKKADRIIHHLRQ---------LEVQQGGNVKENELIDAQGQLNALHH-DNPRLQHNSVL 632
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+ KQ + + GD V V S+G+ G E++ + GN KW
Sbjct: 633 QRAKQKHDLHK------GDAVLVKSYGQYG----------ELLSKRGNHKW 667
>gi|421892451|ref|ZP_16323108.1| Recombination inhibitory protein MutS2 [Streptococcus pyogenes
NS88.2]
gi|379981799|emb|CCG26830.1| Recombination inhibitory protein MutS2 [Streptococcus pyogenes
NS88.2]
Length = 782
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 310 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 369
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGDEQS+ Q+LSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 370 NIFADIGDEQSIEQNLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 429
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 430 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 488
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 489 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 542
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 543 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 589
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 590 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 630
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 631 ARAPRIGDDIIVTSYGQRGTL 651
>gi|425055377|ref|ZP_18458853.1| MutS2 family protein [Enterococcus faecium 505]
gi|403034046|gb|EJY45521.1| MutS2 family protein [Enterococcus faecium 505]
Length = 786
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHNDL 553
>gi|326201810|ref|ZP_08191681.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
gi|325988410|gb|EGD49235.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
Length = 792
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 220/400 (55%), Gaps = 48/400 (12%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
+PID +I K L++TGPNTGGKT+ LKTVGL +M +SGL I ++E ++ F+ ++A
Sbjct: 317 IPIDFWIGDKFSSLIVTGPNTGGKTVSLKTVGLFTLMVQSGLLIPANEGTEMSVFEKIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I+ ++SL+LLDE+GAGT+P EG AL MS+LE+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMKNIVDILDGVNNKSLILLDELGAGTDPTEGAALAMSILESL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ T+ATTH+ ELK S ENA EFD L+PTY++L GVPG+S+A I++
Sbjct: 437 HRMGAT-TLATTHYSELKVYAISTAGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ +++ ++++ +E+ +++ + A + + L K+L
Sbjct: 496 RLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLED 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 690
+R++ A+Q+ +++K A AR ++ S Q S+ + L V ++
Sbjct: 556 QKRRL----ATQKESELRK---AREEARRILTDSKHQADELVSEMKRLAKEQEEAEVRRQ 608
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR---VK 747
++LR ++S++ S+V+ I PR VK
Sbjct: 609 TEELRQRLNKSIN---------------------------KLDDSLVESI--MPRQGLVK 639
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
+ GD V + + +KGT++ + E VQ G MK
Sbjct: 640 PPKNLKPGDTVLIVNLNQKGTILAIPDKNGEAQVQAGIMK 679
>gi|422883220|ref|ZP_16929669.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK49]
gi|332363158|gb|EGJ40943.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK49]
Length = 777
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 215/390 (55%), Gaps = 40/390 (10%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLAEVIVGHAQEQTNTDS-DVNRII---ERLEEQTL----E 524
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
Q+ K+ VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAAKVGDDILVTSYGQRGTLVK 648
>gi|407978334|ref|ZP_11159166.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. HYC-10]
gi|407415102|gb|EKF36715.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. HYC-10]
Length = 786
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 218/710 (30%), Positives = 327/710 (46%), Gaps = 152/710 (21%)
Query: 89 TYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVAL 148
TY +SL LL E IE SC D G L A+R +R + LR
Sbjct: 122 TYAESLILLPEVRKEIE-----SCIGD-NGEVLDHATPALRTIR--TQLR---------- 163
Query: 149 LQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHGRLC 208
SL + +++ + IR ++ML + + IRN+ R
Sbjct: 164 ---------SLESKVRDKLESMIRSQSASKMLSDTI-VTIRND--------------RFV 199
Query: 209 IRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
I + S G ++ SSSG IEP V LN+ LQQ R + E +L LT
Sbjct: 200 IPVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDLNNTLQQTRLKEKQEVEKILQMLTAS 259
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSS 325
+ +DE+ +N + LD + A+A Y+ + T P++
Sbjct: 260 VSEHIDELLHNVNELQTLDFIFAKAKYAKAEKATKPSV---------------------- 297
Query: 326 EREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSP 385
+ IYL +A HPLL + Q D+E
Sbjct: 298 NEQGEIYLKRARHPLL-----PRDQVVANDIE---------------------------- 324
Query: 386 SEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSS 445
+ + +VITGPNTGGKT+ LKT+GL +M ++GLHI
Sbjct: 325 -------------------LGKDFSTIVITGPNTGGKTVTLKTLGLLTLMTQAGLHIPVE 365
Query: 446 EYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPL 505
E ++V FD VFADIGDEQS+ QSLSTFS H+ I +I+ T +SLVL DE+GAGT+P
Sbjct: 366 EGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKNLTPRSLVLFDELGAGTDPA 425
Query: 506 EGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILW 565
EG AL MS+L+ ++ + + IATTH+ ELK Y+ + NA +EFD L PTY++L
Sbjct: 426 EGAALAMSILDEVHQTNARV-IATTHYPELKAYGYNREGVTNASVEFDIETLSPTYRLLI 484
Query: 566 GVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
GVPGRS+A I++RLGLP ++ A+ A E++++I +E K + E +HE +
Sbjct: 485 GVPGRSNAFEISKRLGLPHHLIDRAKADMHAEHNEVDQMIASLEASKKKAEEELHETEVY 544
Query: 626 LMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS 685
+ LHK L +R+ILE + K+ + A K+A+++ +A +A
Sbjct: 545 RREAEKLHKEL---QRQILEWNEQK-----DKLLEEAE------QKAAEKIEQAAKEAED 590
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR 745
++ Q+LR S+ +H L +D + A + K P
Sbjct: 591 II----QELR-----SIKSEHRSFKEHEL--------IDARKRLEEAVPEFDRKKKPEPV 633
Query: 746 VKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K + GD V V +FG+KGT+I+ + +E VQ+G +K +K D+
Sbjct: 634 KKTSRQLKPGDEVKVLTFGQKGTLIE-QTGNKEWSVQMGILKMKVKEKDM 682
>gi|302758310|ref|XP_002962578.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
gi|300169439|gb|EFJ36041.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
Length = 825
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 207/389 (53%), Gaps = 67/389 (17%)
Query: 198 LEVSSIHGRLCIRTGADQ--LSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTK 253
+ +++ RLC+ A L G++L SS G+ + EP A+ LN+ Q A+
Sbjct: 195 MTITTRRARLCVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERA 254
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
E + L ++ I + LN I +D+ ARA ++ G P F
Sbjct: 255 EEVAICRRLASRVAASAASILEQLNAITLVDLACARAKHAKWLGAVKPAFF--------- 305
Query: 314 THEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNA 373
S SE + I + + HPLLL+ A
Sbjct: 306 --------ESKSESKGVI-IEEIRHPLLLE----------------------------TA 328
Query: 374 ARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAV 433
KG N PVPIDI + ++++I+GPNTGGKT+ LKT+G+A
Sbjct: 329 LEKGLDRDNF--------------PVPIDIKVRDGVKIVIISGPNTGGKTVALKTLGIAS 374
Query: 434 MMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLV 493
+MAK+GL++ +S ++PWFD +FAD+GD QSL Q+LSTFSGH++++ I S QSLV
Sbjct: 375 IMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTFSGHMRRLCKITEASGPQSLV 434
Query: 494 LLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK-YSNDF-FENACME 551
L+DEIG GT+P EG++L ++L+ FA++ L I TTH LKTL + D FENA +E
Sbjct: 435 LIDEIGGGTDPAEGSSLATAVLKYFAKTVH-LCIVTTHSASLKTLPIHDQDLPFENASVE 493
Query: 552 FDEVKLKPTYKILWGVPGRSSAINIAERL 580
FD L+PTY++LWG+PG+S+A+NIA+ L
Sbjct: 494 FDLETLRPTYRVLWGLPGQSNALNIAKSL 522
>gi|320529025|ref|ZP_08030117.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
gi|320138655|gb|EFW30545.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
Length = 785
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 274/585 (46%), Gaps = 113/585 (19%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F G++ S+SG +EPL+ V LN+ ++Q + + +L L++++ D + +
Sbjct: 205 FPGVIHDRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSE 264
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ +D++ ARA S +P R + L +
Sbjct: 265 NCTILADIDLIFARAGLSRDMEAYAPTF----------------------NRAGYVRLQR 302
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
A HPLL P +
Sbjct: 303 ARHPLL-------------------------------------------PKD-------- 311
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
H VPIDI + R VL+ITGPNTGGKT+ +KT+G+ +MA+SG + ++ A++P + S
Sbjct: 312 -HVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILALMAQSGCFLPTASGAELPVYGS 370
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
++ADIGDEQS+ QSLSTFS H K I I+ ++ S LVLLDE+GAGT+P EG AL S++
Sbjct: 371 IYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSDDLVLLDEVGAGTDPGEGAALARSII 430
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E + + IATTH+ LKT Y NA +EFD L+PTY++L G PG S+A +
Sbjct: 431 EHLLQR-RISVIATTHYAALKTYAYGRQGVMNASVEFDTGTLRPTYRLLIGTPGASNAFS 489
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+ RLGL +V A++ V+ E+E+ K V+E R +
Sbjct: 490 ISRRLGLADAIVARAQRYIDEDHVRFETVVNELEQEK-----RVYETR----------QT 534
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
LRTR + + Q + K A R L+HK+ ++ +AR + ++L+
Sbjct: 535 ELRTRAQKISAMEEQLRTERDKFIRA---HRELLHKAREEANGIVREARRSAEETIKKLK 591
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKV--EHPATASSSVVKDIKQSPRVKRTELPN 753
Q V + + + ++ T + HP+ A K ++ E+
Sbjct: 592 ----QQFDDHGVKERRKAIQEARERLTEAYMPQRHPSAA--------KVGQKIHAGEI-E 638
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVTY 798
GD+VH++ ++GTV ++ +E+ VQ+G ++ ++K TD T+
Sbjct: 639 PGDIVHITRLAQEGTVFAIQ--GKELTVQIGALRTVVK-TDECTF 680
>gi|402303647|ref|ZP_10822737.1| MutS2 family protein [Selenomonas sp. FOBRC9]
gi|400378042|gb|EJP30906.1| MutS2 family protein [Selenomonas sp. FOBRC9]
Length = 785
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 221/402 (54%), Gaps = 37/402 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + R VL+ITGPNTGGKT+ +KT+G+ +MA+SG + ++ A++P + S++A
Sbjct: 314 VPIDIELGRGFSVLLITGPNTGGKTVSMKTLGILALMAQSGCFLPTASGAELPVYGSIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H K I I+ ++ S LVLLDE+GAGT+P EG AL S++E
Sbjct: 374 DIGDEQSIEQSLSTFSAHTKNIVRILQKAESNDLVLLDEVGAGTDPDEGAALARSIIEHL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + IATTH+ LKT Y NA +EFD L+PTY++L G PG S+A +I+
Sbjct: 434 LQR-RISVIATTHYAALKTYAYGRQGVMNASVEFDTATLRPTYRLLIGTPGASNAFSISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V A++ V+ E+E+ K V+E R + LR
Sbjct: 493 RLGLADAIVARAQRYIDEDHVRFETVVNELEKEK-----RVYETR----------QTELR 537
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
TR + + Q + K A R L+HK+ ++ +AR + ++L+
Sbjct: 538 TRAQKISAMEEQLRTERDKFIRA---HRKLLHKAREEANGIVREARRSAEETIKKLK--- 591
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKV--EHPATASSSVVKDIKQSPRVKRTELPNVGD 756
Q V + + + ++ T + HP+ +K +++ E+ GD
Sbjct: 592 -QQFDDHGVKERRKAIQEARERLTEAYMPQRHPSA--------VKVGQKIRAGEI-EPGD 641
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIVTY 798
+VH++ ++GTV+ V+ +E+ VQ+G ++ ++K TD T+
Sbjct: 642 IVHITRLAQEGTVLAVQ--GKELTVQIGALRTVVK-TDECTF 680
>gi|407473381|ref|YP_006787781.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407049889|gb|AFS77934.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 792
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 273/579 (47%), Gaps = 118/579 (20%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
F GL+ SSSG IEP++ V LN+EL++ + + K E +L L+E + + + I
Sbjct: 210 FPGLIHDQSSSGATLFIEPMAIVNLNNELKELKLNEKKEIEKILTELSEMVGEENEGIRS 269
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
+ Q+D + A+ SL G+ PNI + R + I + K
Sbjct: 270 NQKILSQIDFIFAKGKLSLDMNGSKPNI---------------------NNRGY-INIKK 307
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
HPLL G KD
Sbjct: 308 GRHPLL-----------------------------------GVKDV-------------- 318
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
VP DI++ L+ITGPNTGGKT+ LKTVGL +M +SGL + ++ F++
Sbjct: 319 ---VPTDIYLGDNFTTLLITGPNTGGKTVTLKTVGLFTLMMQSGLQVPVEHGTEMAVFEN 375
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I +I++ SLVL DE+GAGT+P EG AL MS+L
Sbjct: 376 IFADIGDEQSIEQSLSTFSSHMTNIVDILNNLDDNSLVLFDELGAGTDPTEGAALAMSIL 435
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+ + + + T+ATTH+ ELK + + ENA +EF+ L PTY++L GVPG+S+A
Sbjct: 436 D-YLYNRKIRTVATTHYSELKVYALTTEGIENASVEFNVETLSPTYRLLIGVPGKSNAFE 494
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I++RLGL ++ +A++ + +V+ +E+ + + ++ EA N
Sbjct: 495 ISKRLGLQDFIIDSAKEFISKENIAFEDVLASIEKDRIETEKNREEA------------N 542
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ--- 692
LR L+ ++ K++ ++ I R ++ L + +++ ++++ +
Sbjct: 543 RLRREVNQLKEELEEKTLKIE--NNREKILREAREEARNVLLKARAESEEILNELKEVSI 600
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
++ S+ L K L N +D +E D+ + K++ P
Sbjct: 601 EIEKEQSRRLQEAK-----EKLKGN-----IDNIEG----------DLSEQILSKKSAKP 640
Query: 753 ----NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
++G+ V + S + GTV+ ++VQVG MK
Sbjct: 641 LASVDIGENVKILSLNQTGTVLSAPDENGNVLVQVGIMK 679
>gi|306490800|gb|ADM94921.1| mismatch repair ATPase [uncultured candidate division JS1
bacterium]
Length = 790
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 148/216 (68%), Gaps = 1/216 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + K +L+ITGPNTGGKT+ LKTVGL +MA+SGLHI ++V F +FA
Sbjct: 317 VPIDIELGEKFEILIITGPNTGGKTVTLKTVGLLTLMAQSGLHIPVEVDSEVAIFKKIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H++ I +I+ ++ SLVLLDE+GAGT+P EG+AL M++L+
Sbjct: 377 DIGDEQSMEQSLSTFSAHIQNIIHILEEADQYSLVLLDELGAGTDPSEGSALAMAILDLL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + ++TTHH LK Y + NA +EFDE LKPTYKI G+PG+S A +A+
Sbjct: 437 KSKGAKV-LSTTHHDSLKAYAYLTEGVMNAKVEFDEKTLKPTYKISIGLPGKSCAFAVAQ 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQ 614
RLGLP +V+ A Q ++ +I +ME+ K Q
Sbjct: 496 RLGLPEMVLDKAEQYLVKEKLDLENLIRKMEKDKDQ 531
>gi|257897919|ref|ZP_05677572.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257835831|gb|EEV60905.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 786
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|423069500|ref|ZP_17058286.1| MutS2 protein [Streptococcus intermedius F0395]
gi|355364177|gb|EHG11910.1| MutS2 protein [Streptococcus intermedius F0395]
Length = 776
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 224/408 (54%), Gaps = 43/408 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L + HP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVTHPLIENAVANDLYFASDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
++V FD +FADIGDEQS+ QSLSTFS H+ I I+ QS SLVLLDE+GAGT+P
Sbjct: 357 DNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVTILEQSDENSLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPG S+A IA RLGL VV++A++L S ++N +I ER + Q L E+R
Sbjct: 476 QGVPGCSNAFEIARRLGLSDRVVKDAQELTDTDS-DVNRII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHDKSSLKPHEIIEAKSQLKKL----APETVDLSQNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
+ ++ P VGD + V S+G++GT++ +++ + E QVG +K ++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLVNQIKDGRWE--AQVGLIKMTLE 667
>gi|94989196|ref|YP_597297.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429]
gi|94542704|gb|ABF32753.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429]
Length = 818
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 346 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 405
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
++FADIGD+QS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 406 NIFADIGDDQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 465
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 466 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 524
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 631
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 525 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 578
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 690
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 579 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 625
Query: 691 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 626 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 666
Query: 749 TELPNVGDLVHVSSFGKKGTV 769
P +GD + V+S+G++GT+
Sbjct: 667 ARAPRIGDDIIVTSYGQRGTL 687
>gi|357636861|ref|ZP_09134736.1| MutS2 family protein [Streptococcus macacae NCTC 11558]
gi|357585315|gb|EHJ52518.1| MutS2 family protein [Streptococcus macacae NCTC 11558]
Length = 776
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 227/398 (57%), Gaps = 39/398 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D++ +T ++ITGPNTGGKTI LKT+GL ++A+SGL IL+ +KV F
Sbjct: 307 LLNPVANDLYFGDQTTTILITGPNTGGKTILLKTLGLTQLLAQSGLPILADSGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL DE+GAGT+P EG AL +S+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILTHADSDSLVLFDELGAGTDPQEGAALAISI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIEKAFVENASMEFDMASLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L A S ++N +I ++E+ + E+R L + + +
Sbjct: 486 EIARRLGLDEIIVSEAEKLTYADS-DVNSMIEQLEK-------QMAESRRRLDNIQEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L+ R + + K ++++ A A+S++ K+ L S ++L H++A QL
Sbjct: 538 ENLKFNRAVKKLYQEFSHAKDKELNKAKLEAQSIIEKA---LTESNEILKNL-HEKA-QL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P V+ + ++ ++K+ S + + + R +
Sbjct: 593 KP--------------HQVIEA---KSKLEKLAPEVDLSKNKILKKAKKQRA-----IHA 630
Query: 755 GDLVHVSSFGKKGTVIK-VEPSKEEIVVQVGNMKWIMK 791
GD + VSS+G++GT+IK ++ + E QVG +K +K
Sbjct: 631 GDDIIVSSYGQRGTLIKQLKDGRWE--AQVGLIKMTLK 666
>gi|431741156|ref|ZP_19530063.1| MutS2 protein [Enterococcus faecium E2039]
gi|430602267|gb|ELB39845.1| MutS2 protein [Enterococcus faecium E2039]
Length = 786
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|418951998|ref|ZP_13504057.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
gi|375370325|gb|EHS74140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
Length = 782
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|425059158|ref|ZP_18462510.1| MutS2 family protein [Enterococcus faecium 504]
gi|403036397|gb|EJY47747.1| MutS2 family protein [Enterococcus faecium 504]
Length = 786
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|431752400|ref|ZP_19541083.1| MutS2 protein [Enterococcus faecium E2620]
gi|430613891|gb|ELB50890.1| MutS2 protein [Enterococcus faecium E2620]
Length = 786
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|293570971|ref|ZP_06682015.1| MutS2 family protein [Enterococcus faecium E980]
gi|430841856|ref|ZP_19459773.1| MutS2 protein [Enterococcus faecium E1007]
gi|431077718|ref|ZP_19495183.1| MutS2 protein [Enterococcus faecium E1604]
gi|431112285|ref|ZP_19497661.1| MutS2 protein [Enterococcus faecium E1613]
gi|431586437|ref|ZP_19520952.1| MutS2 protein [Enterococcus faecium E1861]
gi|431737011|ref|ZP_19525967.1| MutS2 protein [Enterococcus faecium E1972]
gi|291608955|gb|EFF38233.1| MutS2 family protein [Enterococcus faecium E980]
gi|430493674|gb|ELA69965.1| MutS2 protein [Enterococcus faecium E1007]
gi|430566133|gb|ELB05254.1| MutS2 protein [Enterococcus faecium E1604]
gi|430569239|gb|ELB08256.1| MutS2 protein [Enterococcus faecium E1613]
gi|430593615|gb|ELB31601.1| MutS2 protein [Enterococcus faecium E1861]
gi|430599387|gb|ELB37093.1| MutS2 protein [Enterococcus faecium E1972]
Length = 786
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|302384796|ref|YP_003820618.1| MutS2 family protein [Clostridium saccharolyticum WM1]
gi|302195424|gb|ADL02995.1| MutS2 family protein [Clostridium saccharolyticum WM1]
Length = 796
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 218/422 (51%), Gaps = 78/422 (18%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I + R +L++TGPNTGGKT+ LKTVGL +M +SGLHI + + +++ FD VFA
Sbjct: 315 VPITIHLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDEVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ Q+ S SL L DE+GAGT+P EG AL +S+L +F
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNIVHILGQADSNSLCLFDELGAGTDPTEGAALAISIL-SF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ T+ATTH+ ELK + ENAC EF+ LKPTY++L GVPG+S+A I++
Sbjct: 434 LHNMKCRTMATTHYSELKVFALTTPGVENACCEFNVETLKPTYRLLIGVPGKSNAFAISQ 493
Query: 579 RLGLPGIVVQNARQLYGAASA---------EINEVIIEMERFK---------------TQ 614
+LGLP ++ +A+ A E N V IE ER + TQ
Sbjct: 494 KLGLPDYIIDDAKTHLEAKDETFEDLLTHLEENRVTIEKERIQIASYKLEVEQLKTRLTQ 553
Query: 615 FLEHVHEAR-HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSA 673
E + E R H + ++ + +LR ++ A Q R + K++ + +A+ L A
Sbjct: 554 KEERLDERRDHMIREAKEEAQRILRDAKE----TADQTIRSINKLAADSGVAKEL---EA 606
Query: 674 QQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS 733
Q RS + + Q + S S + GK +D
Sbjct: 607 Q---------RSKLRNKLQDVDSSLSLKNEKKQPGKQ------------ID--------- 636
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
PR + +GD V V S GTV + +K ++ VQ+G ++ ++ +
Sbjct: 637 ----------PRKLK-----LGDGVKVLSMNLNGTVSSLPNAKGDLYVQMGILRSLVNLS 681
Query: 794 DI 795
D+
Sbjct: 682 DL 683
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 65/304 (21%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET-NAAIEMQKHG 110
++L+ LE+ K+ ++ +A + G+E + S + Y + +R ET +AA +++ G
Sbjct: 4 KALKTLEYHKIITQLAQYASSDSGKELCRNLIPSTD--YHEIVRAQQETTDAATRVRQKG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRA-SPLRPNEALAVVALLQFSETLQLSLRAAI---KED 166
S S +R++R + L AL + +L S L +S R ED
Sbjct: 62 SISF-----------GGVRDIRPSLKRLDVGSALGMAEILSISSLLTVSARVKAYGRHED 110
Query: 167 ADL--------YIRFMPLTQMLYQLMDMLIRNEN-------------------NESLFLE 199
++L + PLT + ++ ++ E N+ + +
Sbjct: 111 SELPEDSLEESFRMLEPLTPVNTEIKRCILSEEEVSDDASPGLHHVRRSMRSINDKIHTQ 170
Query: 200 VSSI----------------HGRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPL 240
++SI GR C+ ++ S G++ S GS IEP++ V L
Sbjct: 171 LNSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSQVSGMVHDQSSTGSTLFIEPMAIVKL 230
Query: 241 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 300
N++L+ K E VL L+ ++ L+E+E + +LD + A+A S + +
Sbjct: 231 NNDLRALEIQEQKEIEMVLADLSNQLAPYLNELETDFEILTKLDFIFAKAALSKHYNASE 290
Query: 301 PNIF 304
P IF
Sbjct: 291 P-IF 293
>gi|154482859|ref|ZP_02025307.1| hypothetical protein EUBVEN_00555 [Eubacterium ventriosum ATCC
27560]
gi|149736287|gb|EDM52173.1| MutS2 family protein [Eubacterium ventriosum ATCC 27560]
Length = 800
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 151/217 (69%), Gaps = 1/217 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + +L++TGPNTGGKT+ LKTVGL +M ++GLHI + E +K+ F VFA
Sbjct: 327 VPIDIHLGKDFNLLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPAFEGSKLAVFKEVFA 386
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ NI++Q+ SLVL DE+GAGT+P+EG ALG+S+L
Sbjct: 387 DIGDEQSIEQSLSTFSAHMVNTVNILNQADQDSLVLFDELGAGTDPVEGAALGISILTFL 446
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
GS + +ATTH+ ELK S + +NA EFD L+PTY++L GVPG+S+A I+
Sbjct: 447 KNIGSRI-MATTHYSELKLFALSTEGVQNASCEFDVETLRPTYRLLIGVPGKSNAFAISS 505
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
+LGLP ++++A+ + + + +V+ E+ER + Q
Sbjct: 506 KLGLPDYIIEDAKSHIDSDNEQFEDVLSEIERQRIQI 542
>gi|430882566|ref|ZP_19484114.1| MutS2 protein [Enterococcus faecium E1575]
gi|430556811|gb|ELA96306.1| MutS2 protein [Enterococcus faecium E1575]
Length = 786
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|402816098|ref|ZP_10865689.1| protein MutS2 [Paenibacillus alvei DSM 29]
gi|402506002|gb|EJW16526.1| protein MutS2 [Paenibacillus alvei DSM 29]
Length = 787
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 217/397 (54%), Gaps = 34/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +++TGPNTGGKT+ LKT+GL +M+ SGL I + + +++ FD+++A
Sbjct: 317 VPIDVELGNDYTSIIVTGPNTGGKTVSLKTMGLLSLMSMSGLFIPAQDGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS HL I I+ + T +SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHLTNIIRILGEMTPKSLVLLDELGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 437 HRLGCRI-VATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++++AR E+ E + +E E+ A + + K
Sbjct: 496 RLGLPSSIIEHAR-------GEVTEEDMRIETMIASLEENRLRAEAEREEAERIRKETEH 548
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R + A + ++I A+ AR +V K+ + ++ + L AQ+
Sbjct: 549 LRAVLASEEAKLHAERDKRIERASEEAREIVRKARHEADDIITELKLL----AQE----- 599
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
V +H+LT ++ +D+ PA+ +S K P K+ GD V
Sbjct: 600 -------GVNVKEHLLTEARKR--LDEAA-PASKLAS-----KAKPAKKQARKIEAGDDV 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S +KG+V VE + E VVQ+G MK + D+
Sbjct: 645 MVYSLNQKGSV--VELAGNEAVVQLGIMKMKVPMDDL 679
>gi|339639945|ref|ZP_08661389.1| MutS2 family protein [Streptococcus sp. oral taxon 056 str. F0418]
gi|339453214|gb|EGP65829.1| MutS2 family protein [Streptococcus sp. oral taxon 056 str. F0418]
Length = 777
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 213/387 (55%), Gaps = 40/387 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L+ HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IQLLQARHPLIENAVANDLHFGSNLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
+ + V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S SLVLLDE+GAGT+P
Sbjct: 357 DKGSCVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSDSLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY+ +
Sbjct: 417 QEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPGRS+A IA RLGL ++V +A++ S ++N++I ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDS-DVNQII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K V+ + Q + P S K +KQ+
Sbjct: 581 ------------SILKNLHDKSSLKPHEVIEAKAQLKKL----APEVVDLSKNKVLKQA- 623
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVIK 771
K+ P VGD + V+S+G++GT++K
Sbjct: 624 --KKNRAPKVGDDIQVTSYGQRGTLVK 648
>gi|255281368|ref|ZP_05345923.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
14469]
gi|255268325|gb|EET61530.1| MutS2 family protein [Marvinbryantia formatexigens DSM 14469]
Length = 792
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 223/406 (54%), Gaps = 37/406 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + +L+ITGPNTGGKT+ LKTVGL +M +SGLHI + + +++ FD VFA
Sbjct: 316 VPIDIRLGQDFDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDDVFA 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +++L
Sbjct: 376 DIGDEQSIEQSLSTFSAHMTNIVSILKEANERSLVLFDELGAGTDPTEGAALAIAVLSNL 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + T+ATTH+ ELK S EN C EF+ L+PTY++L G+PG+S+A I+
Sbjct: 436 HRQG-IRTMATTHYSELKVFALSTPGVENGCCEFNVETLRPTYRLLIGIPGKSNAFAISA 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP +++ AR+ + +I ++E + E H+
Sbjct: 495 KLGLPEDIIEEAREQLSQQDEDFESLISDLETSRVTIEREREEINHY------------- 541
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ +E QR + Q+ DA S +++ A++ + + A++ +
Sbjct: 542 --KEEIERL-KQRLEQKQETLDA----------SRERILREANEQAHAILREAKEYADTT 588
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP-RVKRTELPNVGDL 757
++ + K GK Q + + +Q E ++ ++ +++P + + + ++GD
Sbjct: 589 IKNFN--KFGK-QGIDSRAMEQERSRLREKMSSVEKNLAIKTQRAPAKTLQAKDLHLGDS 645
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVG------NMKWIMKFTDIVT 797
V V S KGTV + +K ++ VQ+G N+K + K D+ T
Sbjct: 646 VRVLSMNLKGTVSTLPNAKGDLFVQMGILRSQVNIKDLEKIADVET 691
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 131/294 (44%), Gaps = 53/294 (18%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLD-ETNAAIEM-QKHGS 111
L+ LE+ K+ ++ A ++ G+E L S + + +R+L ET+ A+ M + G
Sbjct: 6 LKTLEYHKIIDRLTELAGSTPGKELCKNLLPSSDI---EEIRMLQAETSLALSMLYQKGH 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD--- 168
S +GV + ++ +++ + S L P E LA+ LL+ + ++ R E+
Sbjct: 63 VSF--SGV--TNIRGSLKRLEVGSILSPAELLAICRLLEVTNRVKAYSRKENSEEEPNAL 118
Query: 169 --LYIRFMPLTQMLYQLMDMLIRNEN-------------------NESLFLEVSSI---- 203
++ PLT + ++ L E N+ + +++S+
Sbjct: 119 DVMFEALQPLTPLANEIRRCLPSEEEISDDASPALRSIRRAMRQMNDKVHAQLNSMVNGS 178
Query: 204 -------------HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQA 247
+GR C+ A+ + +G++ S GS IEP++ + LN+EL++
Sbjct: 179 AKAYLQDAVVTMRNGRYCLPVKAEYRGQVQGMIHDQSSTGSTLFIEPMAVIKLNNELREL 238
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
K E +L L+ + V+ + +E L + +LD + ARA S S+ G+ P
Sbjct: 239 EIKEEKEIEVILANLSGQAGVEQEALESNLTLLTKLDFIFARAQLSKSYDGSEP 292
>gi|422822015|ref|ZP_16870208.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK353]
gi|324990320|gb|EGC22258.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK353]
Length = 777
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 217/392 (55%), Gaps = 44/392 (11%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGPDLIEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F +FAD+GDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADVGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA RLGL ++V +A++ S ++N +I ER + Q LE
Sbjct: 473 RFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTDTDS-DVNRII---ERLEEQTLESRKR 528
Query: 622 ARHFLMLSR-NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
+ + + NL N R +K+ ++ ++ K AQ++ A
Sbjct: 529 LDNICEVEQENLKFN--RALKKLYNEFNREKETELNK-----------ARLEAQEIVDLA 575
Query: 681 -SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD 739
S++ S++ ++LH K ++ + Q + P T S K
Sbjct: 576 LSESESIL------------KNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKV 619
Query: 740 IKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
+KQ+ K+ P VGD + V+S+G++GT++K
Sbjct: 620 LKQA---KKNRAPKVGDDILVTSYGQRGTLVK 648
>gi|123967774|ref|YP_001008632.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. AS9601]
gi|123197884|gb|ABM69525.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. AS9601]
Length = 803
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 222/430 (51%), Gaps = 78/430 (18%)
Query: 218 FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
FKG++ SS G+ + EP S V +++ A +T E +L + + + + +
Sbjct: 219 FKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEEFKLLKKWSHVVSDNSKNLIE 278
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
M + +++L+ R+ YS GG +P + P+ S + S
Sbjct: 279 MASILLRLENALTRSRYSKWIGGKTP----------TFEKNPIISLIGFS---------- 318
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
HPLL+ +HK+K +P
Sbjct: 319 --HPLLIWEHKKKG----------------------------------APP--------- 333
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
PV +D +I R +V+ ITGPNTGGKT LK +GL+++MA++GL I S+ +P+ +
Sbjct: 334 --PVAVDFYINRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPN 391
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQ---STSQSLVLLDEIGAGTNPLEGTALGM 512
++ DIGD QSL ++LSTFSGH+ +I I+ S+VLLDEIG+GT+PLEG+AL M
Sbjct: 392 IYVDIGDNQSLEENLSTFSGHISRIKGILDSLDYKKGLSVVLLDEIGSGTDPLEGSALAM 451
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
+LL+ FA S +T+ATTH+G++K LKY++ FEN + FDE LKP Y + WG+PGRS+
Sbjct: 452 ALLKEFANK-SDITLATTHYGDIKALKYNDSRFENVSVAFDEESLKPKYILNWGIPGRSN 510
Query: 573 AINIAERLGL-PGIVVQNARQLYGAASAEINEVI--IEMERFKTQFLEHVHEARHFLMLS 629
A++I++R+GL I+ + A L IN +I +E ER K Q A + +
Sbjct: 511 ALSISKRIGLDESILNEAANYLKPKEVDNINSIIKGLEEERIKQQ--NSAEAAAELIART 568
Query: 630 RNLHKNLLRT 639
LH L R
Sbjct: 569 EILHDELKRN 578
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L +SSFA T +G+++ L+ + I Y+ S RLL+ET E++K+
Sbjct: 19 ESINLLEWDSLKTHLSSFASTEMGKQSILS--FVIPSEYEASKRLLNETVEINELEKNLD 76
Query: 112 CSLDLTGV-DLS 122
S+ +GV D+S
Sbjct: 77 KSISFSGVFDIS 88
>gi|418563215|ref|ZP_13127657.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
gi|371971759|gb|EHO89155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
Length = 782
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNIQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|184155003|ref|YP_001843343.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum IFO
3956]
gi|227514541|ref|ZP_03944590.1| MutS family DNA mismatch repair protein [Lactobacillus fermentum
ATCC 14931]
gi|260663398|ref|ZP_05864289.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum
28-3-CHN]
gi|183226347|dbj|BAG26863.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum IFO
3956]
gi|227087098|gb|EEI22410.1| MutS family DNA mismatch repair protein [Lactobacillus fermentum
ATCC 14931]
gi|260552250|gb|EEX25302.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum
28-3-CHN]
Length = 791
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 223/414 (53%), Gaps = 65/414 (15%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI + + + +VITGPNTGGKTI LKT+GL +MA+SG+ I ++E + V FD+VFA
Sbjct: 317 VANDIALGKDYQAIVITGPNTGGKTITLKTLGLIQLMAQSGMFIPANENSTVAIFDNVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQSL Q+LSTFSGH++ + I+ Q T+ SLVLLDE+GAGT+P EG AL M++L+
Sbjct: 377 DIGDEQSLEQNLSTFSGHMENVKRILEQITANSLVLLDELGAGTDPKEGAALAMAILDQI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+GS + + TTH+ ELK Y NA MEFD+ L+PTY++L GVPG+S+ I IA+
Sbjct: 437 GATGSEVVV-TTHYPELKVYGYDRAKTINASMEFDQQTLQPTYRLLLGVPGQSNGIAIAK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLG+ V+ A L S ++N++I +L+
Sbjct: 496 RLGIEQAVIDEASSLVSDDSQDLNKMI----------------------------GDLVE 527
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSL---VHKSAQQLCPSASQARSLVHKRAQQLR 695
R++ E ++R + + + + AA L + + +Q +ARS + Q +
Sbjct: 528 QRKRAREE--NERLQAL--VKENAATKEELDAKLDRFNEQRDKLLERARSEANHEVSQAK 583
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVE--------------HPATASSSVVKDIK 741
A+Q +H H+ Q TV + E +P +SV++ K
Sbjct: 584 KKANQIIH--------HLRQLEIQGATVKENELIDAQGALNALHKDNPRLNHNSVLQRAK 635
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
Q ++K VGD V+V S+G++G ++ + + VQ+G +K + D+
Sbjct: 636 QKHQLK------VGDHVNVKSYGQQGVLLN-KRGAHKWEVQLGILKMAIDEADL 682
>gi|83815784|ref|YP_444790.1| MutS2 family protein [Salinibacter ruber DSM 13855]
gi|83757178|gb|ABC45291.1| MutS2 family protein [Salinibacter ruber DSM 13855]
Length = 819
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 205/400 (51%), Gaps = 51/400 (12%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP + + LN+E+++ +++ E +L +T+ ++ + D IE+ L + Q
Sbjct: 218 SASGQTVYIEPAACLELNNEVRELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQF 277
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D++ A+A ++ G P + + E IY + +P+L Q
Sbjct: 278 DLLRAKARFANRLGAVVPKL--------------------NDEGHVEIY--EGRNPVL-Q 314
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
H RR R ++ L P E+ VP+D+
Sbjct: 315 LH-----------------FERRDAGDATDGRASGEEEALPPREV----------VPLDL 347
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ R LVITGPN GGKT+ +KTVGL +M GL + + ++ P FD + ADIGDE
Sbjct: 348 ELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQIVADIGDE 407
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ LSTFS H+ + +++S +LVL+DE G GT+P EG AL ++LE E+G+
Sbjct: 408 QSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDEGAALAQAVLEQLTEAGA 467
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
TIATTHHG LKT + + EN MEFD+ L+PT++ GVPG S A IA R+GL
Sbjct: 468 -RTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAFEIARRMGLS 526
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
G ++ AR L G + +I ER + + +++AR
Sbjct: 527 GDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDAR 566
>gi|424759532|ref|ZP_18187194.1| MutS2 family protein [Enterococcus faecalis R508]
gi|402404409|gb|EJV37027.1| MutS2 family protein [Enterococcus faecalis R508]
Length = 788
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFADIG
Sbjct: 320 DIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++ LG
Sbjct: 440 GAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKCLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L + +
Sbjct: 499 LDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKKAYQ 558
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
E +R +++QK K A ++ A + + ++++ + Q
Sbjct: 559 VFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLESGQ- 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ G +H L +T + ++ H T + K+ K + K + GD V V+
Sbjct: 603 ----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEVIVN 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++G++GT++K + K + VQ+G +K + D+
Sbjct: 653 TYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685
>gi|258512089|ref|YP_003185523.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478815|gb|ACV59134.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 776
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 212/397 (53%), Gaps = 36/397 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + + R+L+ITGPNTGGKT+ LKT+GL +M SGL + + + + + VF
Sbjct: 313 VPIDVELGDRFRLLIITGPNTGGKTVTLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFV 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+++I +++ + T SLVLLDE+GAGT+P EG+AL +++L+
Sbjct: 373 DIGDEQSIEQNLSTFSSHMRRIIDMLERVTPDSLVLLDELGAGTDPAEGSALAIAILDHL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK + N ENA MEFD L+PTY++L GVPGRS+A+ IAE
Sbjct: 433 TSVGARV-VATTHYAELKGYAFRNPAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAE 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLG+P +++ AR + + ++I ++E + EA L +R+ +L R
Sbjct: 492 RLGMPKEILERARSHVAESDIHVEDLIGKLEAASREAERMRDEAEQALREARDQAADLAR 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ A+ K AA AR ++ ++ ++ + RSL + A
Sbjct: 552 QK-------AAWEASKDSMREQAAREAREVIERARREADAVIREIRSLRDRAAV------ 598
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
K+ ++ + + E A +++ RV+
Sbjct: 599 ----------KDHELVELRKRLEAAEPGEKRAAPRRRAQAEVRPGQRVR----------- 637
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S G+KG V++V VVQ+G M+ + D+
Sbjct: 638 -VLSLGQKGDVVEVAQDGRAAVVQLGAMRMKVDARDL 673
>gi|385812102|ref|YP_005848493.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum CECT
5716]
gi|299783001|gb|ADJ40999.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum CECT
5716]
Length = 793
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 223/414 (53%), Gaps = 65/414 (15%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI + + + +VITGPNTGGKTI LKT+GL +MA+SG+ I ++E + V FD+VFA
Sbjct: 319 VANDIALGKDYQAIVITGPNTGGKTITLKTLGLIQLMAQSGMFIPANENSTVAIFDNVFA 378
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQSL Q+LSTFSGH++ + I+ Q T+ SLVLLDE+GAGT+P EG AL M++L+
Sbjct: 379 DIGDEQSLEQNLSTFSGHMENVKRILEQITANSLVLLDELGAGTDPKEGAALAMAILDQI 438
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+GS + + TTH+ ELK Y NA MEFD+ L+PTY++L GVPG+S+ I IA+
Sbjct: 439 GATGSEVVV-TTHYPELKVYGYDRAKTINASMEFDQQTLQPTYRLLLGVPGQSNGIAIAK 497
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLG+ V+ A L S ++N++I +L+
Sbjct: 498 RLGIEQAVIDEASSLVSDDSQDLNKMI----------------------------GDLVE 529
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSL---VHKSAQQLCPSASQARSLVHKRAQQLR 695
R++ E ++R + + + + AA L + + +Q +ARS + Q +
Sbjct: 530 QRKRAREE--NERLQAL--VKENAATKEELDAKLDRFNEQRDKLLERARSEANHEVSQAK 585
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVE--------------HPATASSSVVKDIK 741
A+Q +H H+ Q TV + E +P +SV++ K
Sbjct: 586 KKANQIIH--------HLRQLEIQGATVKENELIDAQGALNALHKDNPRLNHNSVLQRAK 637
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
Q ++K VGD V+V S+G++G ++ + + VQ+G +K + D+
Sbjct: 638 QKHQLK------VGDHVNVKSYGQQGVLLN-KRGAHKWEVQLGILKMAIDEADL 684
>gi|449916866|ref|ZP_21797070.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
15JP3]
gi|449154753|gb|EMB58310.1| putative DNA mismatch repair protein MutS2 [Streptococcus mutans
15JP3]
Length = 776
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDITAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAKSDFILKNLQDKAQLKP 594
>gi|294501473|ref|YP_003565173.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
gi|294351410|gb|ADE71739.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
Length = 787
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 221/791 (27%), Positives = 365/791 (46%), Gaps = 161/791 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGSC 112
VLE++K+ + +SLGRE + S Y++ ++ + T+ A + + G+
Sbjct: 6 FHVLEFNKVKEQLQKKVASSLGREKVANLIPSTQ--YEEVVKWQEATDEATTVLRLRGNV 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI- 171
L + V+S+++ L NE L V + + + ++ + + ED DL +
Sbjct: 64 PLG----GIFDVRSSVKRAEIGGTLSSNELLDVASTIYAARQVKQFIEQVV-EDEDLQLP 118
Query: 172 -------RFMPLTQM-----------------------------------LYQLMDMLIR 189
+ MPL ++ + + ++ LIR
Sbjct: 119 IITEHIEKLMPLPEVEQTIKMSIDENGTVLDGASDQLRGIRQKLRSTESRIREKLESLIR 178
Query: 190 NENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDEL 244
+ + + + + V+ + R I + S G ++ SSSG IEP + V LN+EL
Sbjct: 179 SSSAQKMLSDAIVTIRNERFVIPVKQEYRSAYGGIVHDQSSSGATLFIEPQAIVTLNNEL 238
Query: 245 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIF 304
Q+A+ + E +L+ALT ++ +E+ + + + +LD + A+ YS
Sbjct: 239 QEAKVKEKQEIERILIALTVQVAEVANELRQNVYLLGELDFMFAKGRYS----------- 287
Query: 305 LPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELR 364
HE SK ++R + I L KA HPL+ Q+ D+ + + EL
Sbjct: 288 ----------HELKASKPKMNDRGY-IKLVKAKHPLIAQE----------DVVANDIEL- 325
Query: 365 RRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTI 424
G++ T++ VITGPNTGGKT+
Sbjct: 326 ------------GDQYTSI-----------------------------VITGPNTGGKTV 344
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GL +MA++GL I + + +++ F VFADIGDEQS+ QSLSTFS H+ I +I+
Sbjct: 345 TLKTLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDIL 404
Query: 485 SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
+ +SLVL DE+GAGT+P EG AL +S+L+ E G+ + +ATTH+ ELK Y+ +
Sbjct: 405 QKVDHESLVLFDELGAGTDPQEGAALAISILDQVYERGARV-VATTHYPELKAYGYNREG 463
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV 604
NA +EFD L PTYK+L GVPGRS+A I++RLGL V++ A+ G+ + ++ +
Sbjct: 464 VVNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYIGSETNKVENM 523
Query: 605 IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI 664
I +E + Q + EA ++ LHK L + +I+E K K+ + A
Sbjct: 524 IASLEDSRRQSEHELEEAEELRKEAQKLHKEL---QSQIIEFN-----EKRDKLYEKA-- 573
Query: 665 ARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVD 724
+ AQ +AS+ K LR + ++ K +H L +
Sbjct: 574 -----EEKAQATVKAASEE---AEKIISDLRKMSQKNYALVK----EHELIEARK----- 616
Query: 725 KVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVG 784
++E K + +RT GD V V S+G+KGT+++ S E VQ+G
Sbjct: 617 RLEDAVPTLEKSKKKPAAPKKQERT--LQAGDEVKVLSWGQKGTLVE-RVSNNEWQVQMG 673
Query: 785 NMKWIMKFTDI 795
MK +K D+
Sbjct: 674 IMKMKVKEKDL 684
>gi|15895607|ref|NP_348956.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum ATCC 824]
gi|337737556|ref|YP_004637003.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
gi|38604976|sp|Q97GM6.1|MUTS2_CLOAB RecName: Full=MutS2 protein
gi|15025349|gb|AAK80296.1|AE007734_10 DNA mismatch repair protein mutS, YSHD B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|336292751|gb|AEI33885.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
Length = 788
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 224/413 (54%), Gaps = 55/413 (13%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
A VP++I++ R+ LVITGPNTGGKT+ LKT GL +MA SGL I + E + + +F
Sbjct: 312 AKVVPLNIYMGREFTSLVITGPNTGGKTVTLKTTGLLEVMAMSGLMIPARENSTISFFKE 371
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
V+ADIGDEQS+ QSLSTFS H+ I II + SLVL DE+GAGT+P EG AL +S+L
Sbjct: 372 VYADIGDEQSIEQSLSTFSSHMTNIVRIIDDADEDSLVLFDELGAGTDPTEGAALAISIL 431
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
EA + G+ + +ATTH+ ELK + ENA +EFD L+PTY++L G+PG+S+A
Sbjct: 432 EALRKRGTKI-VATTHYSELKAYALKTENVENASVEFDVETLRPTYRLLIGIPGKSNAFE 490
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL--------M 627
I++RLGL +++ AR+ + E ++I ++ + E++ +A FL
Sbjct: 491 ISKRLGLSDYIIEEARKGISKDTLEFEDLIQNLQTRSVKAEENLRKA-EFLKEQAEKFKE 549
Query: 628 LSRNLHKNLLRTRRKILEHCASQRFRKV--QKISDAAAIARSLVHKSAQQLCPSASQARS 685
++ TR K L H + +K+ + S+A I + + + ++L S S+AR
Sbjct: 550 KYEEKVSSITETREKAL-HEGRREAKKIIEEAKSEADKILKDM--REMERLGYS-SEARQ 605
Query: 686 LVHKRAQQLRP---SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ + Q+L+ +A +SL+ ++ + + +K +K+
Sbjct: 606 RLQESRQKLKEKLNNAEESLNISERDQGE------------------------ALKSVKE 641
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ V + S KG VI + SK E+ +Q G MK +K D+
Sbjct: 642 ------------GEEVFIPSLNMKGIVISTQDSKGEVGIQAGIMKINVKLKDL 682
>gi|159463342|ref|XP_001689901.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283889|gb|EDP09639.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1007
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 279/627 (44%), Gaps = 113/627 (18%)
Query: 38 AVSDSDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLL 97
A + D+ + +ESL +LEW +C V+ F TS+ + ++ +DS LL
Sbjct: 60 ATVEVDEHWAAAEHESLAILEWPAVCKQVACFCGTSVAADLVAGGGLPRGRSREDSELLL 119
Query: 98 DETNAAI----------------EMQKHGSCSLDLTGVDLSLVKSAIREV-----RRASP 136
+T A+ E G C LTG L V S + R P
Sbjct: 120 QQTQEALEAGLEVGGLFDIRPAAEAAAGGVC---LTGKQLEGVASTLEAAFELKERVTVP 176
Query: 137 LRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLI-------- 188
+ + L++ L+ A+I ++ +R + + D
Sbjct: 177 AQGPQQQQQQGGLRYPSLAALA--ASITDEERTLLRAIRGCIQYGGVSDAASEALAAVRA 234
Query: 189 -RNENNESLFLEV------------------SSIHGRLCI--RTGADQLSFKG---LLLS 224
R N E L EV S I GR CI R G KG L S
Sbjct: 235 ERQANKERLRAEVEGWARQLQQKGAAEAGAVSLIRGRFCIGVRAGRQGELPKGSVRLGQS 294
Query: 225 SSGIGSVIEPLSAVPLNDELQQARASVTKAEED----VLLALTEKMQVDLDEIEKMLNGI 280
S+G +EP AV LN+ A A + + EE VL L+ + ++ ++++ +
Sbjct: 295 STGATLYLEPKPAVELNN----AEALLAEREEGEVVRVLSMLSTLLAKRAPQLMRLVDCV 350
Query: 281 IQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPL 340
LDVV ARA ++ G P + T +P S ++P A HP+
Sbjct: 351 TALDVVAARAKHARWLSGVRP----------AFTADPSESP---------FWVPGALHPV 391
Query: 341 LLQQHKQKTQQAW--------KDLESANT-ELRRRKLYGGNAARKGE----KDTNLSPSE 387
L+Q+ Q +D ++A ELRR + + R GE
Sbjct: 392 LMQRGLPPLPQPPSVDDNRFDRDFQAAPAWELRR--VLTPDGPRPGELADGSAAGRGSGG 449
Query: 388 MQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEY 447
V P P+D+ + V+ ITGPNTGGKT+ LKT GL +MA++GL +
Sbjct: 450 GAVDDRAALLPRPLDLRVPSSRAVVAITGPNTGGKTVTLKTAGLMTLMAQAGLFLPCDPT 509
Query: 448 A------------KVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
A ++ WFD V ADIGD QSL Q+LSTFSGH+++I I++ + +SLVLL
Sbjct: 510 ARAEAAAAAAGTPRLAWFDRVLADIGDAQSLQQNLSTFSGHIRRIKQILAVAGPRSLVLL 569
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+G+GT+PLEG AL ++L+ AE LT+ATTHH ELK + + N M FD
Sbjct: 570 DEVGSGTDPLEGAALARAVLDRLAEQAH-LTLATTHHAELKRASEEDGRYVNVSMAFDTA 628
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGL 582
L+PTY++ WG G S+A++IAE LG
Sbjct: 629 TLRPTYRLCWGAAGASNALDIAETLGF 655
>gi|288574770|ref|ZP_06393127.1| MutS2 family protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570511|gb|EFC92068.1| MutS2 family protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 782
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 219/401 (54%), Gaps = 39/401 (9%)
Query: 393 LELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSE 446
++ HP VPID+ RVLVITGPNTGGKT+ LKTVG++V +A GL I + E
Sbjct: 303 FQVRHPMLGSSAVPIDVHCGGAFRVLVITGPNTGGKTVVLKTVGVSVFLAWCGLPIPAVE 362
Query: 447 YAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLE 506
++V S+F+DIGDEQS+ QSLSTFS HLK I NI+ S +SL+LLDE+GAGT+P E
Sbjct: 363 GSQVGEVSSLFSDIGDEQSIEQSLSTFSAHLKNIVNILEDSDDRSLILLDELGAGTDPQE 422
Query: 507 GTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWG 566
G ALG++LL+ F GSL+ +ATTHH +K + D E A ++FD L PTY+++ G
Sbjct: 423 GAALGVALLKTFKRRGSLV-LATTHHNPIKKFATTTDGVETASVDFDLSTLTPTYRLIMG 481
Query: 567 VPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL 626
+PG+S+A+ IAERLG+ V+ +A ++ + A I +I E+++ KT L+ +
Sbjct: 482 IPGQSNALAIAERLGMHREVLGDAEKVLKSGEASIETMIGELQK-KTLHLDSQAASLAKE 540
Query: 627 MLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
L K + R+ LE + K + ++ + L + QAR +
Sbjct: 541 RLEIEELKKAIEKERRDLERIKRRTIMKADR-------------EAERVLEEAERQAREM 587
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
+ + + +A + L+ K G + S +Q + K+IK+
Sbjct: 588 LRGLDEAAKSAADRELNKHKKGVKKSKERSQVRQAVFE------------AKEIKERG-A 634
Query: 747 KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
K E VGD+V VS G G V+ ++ + VV VG +K
Sbjct: 635 KEIE---VGDVVQVSGSGSAGEVLSIKGKR--AVVLVGGLK 670
>gi|402833826|ref|ZP_10882436.1| MutS2 family protein [Selenomonas sp. CM52]
gi|402279672|gb|EJU28454.1| MutS2 family protein [Selenomonas sp. CM52]
Length = 791
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 220/404 (54%), Gaps = 34/404 (8%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
++ A VPIDI + R+L+ITGPNTGGKT+ LKT+GL +M +SG +I ++ +++
Sbjct: 308 IDAAKVVPIDIALGESYRMLLITGPNTGGKTVSLKTIGLFALMVQSGCYIPAAAGSEISV 367
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
+ +V+ IGDEQS+ QSLSTFS H+ + ++ L+LLDEIGAGT+P EG AL M
Sbjct: 368 YTNVYTVIGDEQSIEQSLSTFSAHMSHLVKLLECVEGTDLLLLDEIGAGTDPEEGAALAM 427
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
++LE F G+ TI TTH+ ELKT ++ + ENAC+EFD L+PTY++L G+PG S+
Sbjct: 428 AILEQFLARGA-STIVTTHYSELKTFAFTREGIENACVEFDVETLRPTYRLLTGMPGASN 486
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ RLGL + A+Q A A+ +V+ ++E K ++E R+ +L R
Sbjct: 487 AFAISRRLGLSEAAILRAQQFIKADHAQFEKVVNQLESEKL-----MYEQRNADILERQ- 540
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
++V K+ + + + + +Q+ A Q + + +R
Sbjct: 541 --------------------QRVAKLEEKTQALKDEIREKKEQMLKKARQESANLVRRT- 579
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
R A + + KV + + S + Q +K++ A S + + K +
Sbjct: 580 --RREAEEIIKSLKVQFDDLGIESRRRAMQEAREKLQEAAERSRTGLLPGKAYKEKIDMQ 637
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
VGD+V+V +K TV+K++ + I VQ+GN+K +K D
Sbjct: 638 KLAVGDVVYVRKLDQKATVLKIQGAN--IEVQLGNLKTYVKAGD 679
>gi|384459066|ref|YP_005671486.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
gi|325509755|gb|ADZ21391.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
Length = 806
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 224/413 (54%), Gaps = 55/413 (13%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
A VP++I++ R+ LVITGPNTGGKT+ LKT GL +MA SGL I + E + + +F
Sbjct: 330 AKVVPLNIYMGREFTSLVITGPNTGGKTVTLKTTGLLEVMAMSGLMIPARENSTISFFKE 389
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
V+ADIGDEQS+ QSLSTFS H+ I II + SLVL DE+GAGT+P EG AL +S+L
Sbjct: 390 VYADIGDEQSIEQSLSTFSSHMTNIVRIIDDADEDSLVLFDELGAGTDPTEGAALAISIL 449
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
EA + G+ + +ATTH+ ELK + ENA +EFD L+PTY++L G+PG+S+A
Sbjct: 450 EALRKRGTKI-VATTHYSELKAYALKTENVENASVEFDVETLRPTYRLLIGIPGKSNAFE 508
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFL--------M 627
I++RLGL +++ AR+ + E ++I ++ + E++ +A FL
Sbjct: 509 ISKRLGLSDYIIEEARKGISKDTLEFEDLIQNLQTRSVKAEENLRKA-EFLKEQAEKFKE 567
Query: 628 LSRNLHKNLLRTRRKILEHCASQRFRKV--QKISDAAAIARSLVHKSAQQLCPSASQARS 685
++ TR K L H + +K+ + S+A I + + + ++L S S+AR
Sbjct: 568 KYEEKVSSITETREKAL-HEGRREAKKIIEEAKSEADKILKDM--REMERLGYS-SEARQ 623
Query: 686 LVHKRAQQLRP---SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ + Q+L+ +A +SL+ ++ + + +K +K+
Sbjct: 624 RLQESRQKLKEKLNNAEESLNISERDQGE------------------------ALKSVKE 659
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ V + S KG VI + SK E+ +Q G MK +K D+
Sbjct: 660 ------------GEEVFIPSLNMKGIVISTQDSKGEVGIQAGIMKINVKLKDL 700
>gi|227498526|ref|ZP_03928670.1| mutS2 family protein [Acidaminococcus sp. D21]
gi|226903982|gb|EEH89900.1| mutS2 family protein [Acidaminococcus sp. D21]
Length = 777
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 221/405 (54%), Gaps = 37/405 (9%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
LE VP+DI + + L+ITGPNTGGKT+ LKTVGL +MA++GL L +E A P
Sbjct: 309 LEQESIVPLDIELGQDFTTLLITGPNTGGKTVALKTVGLFALMAQAGL-FLPAEEAIFPV 367
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F V+ADIGDEQS+ QSLSTFSGH+K + +II ++T + LVL+DE+ GT+P EG AL M
Sbjct: 368 FSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATDRDLVLVDEVCVGTDPTEGAALAM 427
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
+++E F ++ +LTI TTH+ ELKT Y ++ +NA +EFD L+PTY++L GVPG S+
Sbjct: 428 AMIEHFYKA-HVLTIMTTHYSELKTFAYEHEGMQNASVEFDPETLRPTYRLLMGVPGSSN 486
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ RLGLP ++ AR + + V+ +E + ++ E + L +
Sbjct: 487 AFYISRRLGLPEDILDEARTFINERHSNMERVLQNLEGERREY-ESRKDEIETLRRETEI 545
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+N L+ + LE + RK ++ DA + R+ + +Q + L RAQ
Sbjct: 546 LRNQLKAEKTRLEKSRNDILRKARE--DADELYRN-ARRESQGI---------LKELRAQ 593
Query: 693 QLRPSASQSLHCTKVGK-NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
Q + +S ++ + ++ L+ NF + + E S +
Sbjct: 594 Q---NLVESAKVERLAEMSRKALSKNFSISGRTEPEGQGLTSGNAA-------------- 636
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
VG +V V + G++G + V + ++ V +G MK + D +
Sbjct: 637 --VGKVVFVKTLGQEGKITAV--NGRDVTVAIGVMKMNVSMKDCI 677
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 187 LIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLN 241
L+ + NN+ F + V+ R I + +L+F G++ SSSG IEP++ V LN
Sbjct: 172 LLHDPNNQKYFQDALVTMREDRYVIPIKQEYRLNFPGIVHDQSSSGATLFIEPMAVVNLN 231
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+++++ E +L LT + + D I + L + Q+D+++A+A Y+ + G P
Sbjct: 232 NDIKKYVLEEKAEVERILRTLTSHVGAEADHILESLAVVAQVDLISAKALYAEALGARRP 291
Query: 302 NIFLPQDMK 310
+ L ++
Sbjct: 292 MMVLDHHLR 300
>gi|218288876|ref|ZP_03493127.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240965|gb|EED08142.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
Length = 776
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 213/397 (53%), Gaps = 36/397 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + + R+L+ITGPNTGGKT+ LKT+GL +M SGL + + +++ + VF
Sbjct: 313 VPIDVELGERFRLLIITGPNTGGKTVTLKTIGLLTLMGMSGLFLPTKRESEIGFCRHVFV 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+++I +++ + T SLVLLDE+GAGT+P EG+AL +++L+
Sbjct: 373 DIGDEQSIEQNLSTFSSHMRRIIDMLERVTEDSLVLLDELGAGTDPAEGSALAIAILDHL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK + N ENA MEFD L+PTY++L GVPGRS+A+ IAE
Sbjct: 433 TSVGARV-VATTHYAELKGYAFRNPAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAE 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLG+P +++ AR + + ++I ++E + EA L +R+ +L R
Sbjct: 492 RLGMPKEILERARSHVAESDIHVEDLIGKLEAASREAELMRDEAERALREARDKEADLAR 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ A+ K AA AR ++ ++ ++ + RSL + A
Sbjct: 552 QK-------AAWEASKDSMREQAAREAREVIERARREADAVIREIRSLRDRAAV------ 598
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
K+ ++ + + E A +++ RV+
Sbjct: 599 ----------KDHELVELRKRLEAAEPGEKRAAPRRRAQAEVRPGQRVR----------- 637
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S G+KG V++V VVQ+G M+ + D+
Sbjct: 638 -VLSLGQKGDVVEVAQDGRAAVVQLGAMRMKVDARDL 673
>gi|304317232|ref|YP_003852377.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778734|gb|ADL69293.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 786
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI +++ LVITGPNTGGKT+ LKTVGL +MA SGL+I + E + V +FD++F
Sbjct: 314 VPISVYLGDSFDTLVITGPNTGGKTVTLKTVGLLTLMAMSGLNIPTDEGSSVAFFDNIFV 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++ TS SLVLLDE+GAGT+P EG AL MS+L+ F
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTNIVTILNSVTSNSLVLLDELGAGTDPTEGAALAMSILD-F 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ TIATTH+ ELK ND ENA +EFD L+PTY++ G+PG+S+A I+
Sbjct: 433 LHRINCRTIATTHYSELKQYALKNDGVENASVEFDVETLRPTYRLTIGIPGKSNAFEISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEME 609
RLGL ++ NAR + ++I ++E
Sbjct: 493 RLGLNEEIIDNARNYITNEELKFEDIIKDLE 523
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 53/293 (18%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
R LE+DK+ + + + + G+E L N + + +D+ N A+ + +G+
Sbjct: 6 FRNLEFDKIVNHIVNLCDSEPGKEMALDIKPYDN--LDKAAKEIDKVNEAVSFISSYGNM 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDA----- 167
S +D L K+ I+ S L + + + L + ++ LR+ +E
Sbjct: 64 SFAFKKIDDILNKAKIK-----STLNIGQLMTISRFLSLAGRVKSYLRSEKEESNYPLLR 118
Query: 168 DLYIRFMPLTQMLYQLMDMLIRNEN--------------------NESLFLEVSSI---- 203
+ IR L LY+ +D ++ +E+ N + ++SI
Sbjct: 119 EYNIRLTNLRD-LYERIDRIVISEDELSDDASPALKDIRRQKAHINNKIKDTLNSIIASS 177
Query: 204 ------------HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQAR 248
+GR + + FKGL+ SSSG IEP++ V LN++L+Q
Sbjct: 178 SKELQDPIITIRNGRYVVPVKQEYRGMFKGLIHDQSSSGATLFIEPMTVVELNNDLRQLE 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ E +L LT+ + + EI + + + +LDV+ A+A YS++ + P
Sbjct: 238 IKEQQEIEKILSELTDDISQHISEIHENMIALTELDVIFAKAKYSINTNSSKP 290
>gi|450073612|ref|ZP_21849057.1| putative DNA mismatch repair protein [Streptococcus mutans M2A]
gi|449210027|gb|EMC10514.1| putative DNA mismatch repair protein [Streptococcus mutans M2A]
Length = 776
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELHKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|229169279|ref|ZP_04296990.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
gi|228614174|gb|EEK71288.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
Length = 786
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKIEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +D+
Sbjct: 643 SGDEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESDM 683
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P+E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|334127861|ref|ZP_08501763.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333388582|gb|EGK59756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 784
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 204/781 (26%), Positives = 353/781 (45%), Gaps = 149/781 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE------ 105
+S +VLE++K+ + +++FA T G+E L S + Y +RL ET A++
Sbjct: 4 DSFKVLEYEKITNWLATFASTIRGKELCRNALPSGD--YDAVVRLHQETAEAVQVLQMQT 61
Query: 106 -----------MQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSET 154
+ K S L +L V S + +R + + V L + +
Sbjct: 62 PPFGGIYDLRQIMKKASMGSVLEVDELRSVMSTMAGMRNVKYFFRDLDIDVSILKEQARP 121
Query: 155 LQL------SLRAAIKEDADLYIRFMP-LTQMLYQL----------MDMLIRNENNESLF 197
L++ L+ AI E + P L ++ +L + ++ + N+ F
Sbjct: 122 LEILGMVERHLKDAIDEHGNFRDDASPELRRITRELQTAQARAKDRLSAILHDAANQKYF 181
Query: 198 LE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVT 252
E V+ R I + + F G++ S+SG +EPL+ V LN+ ++Q + T
Sbjct: 182 QEAIVTVRDERYVIPVKQEYRNYFPGVIHDQSASGATLFVEPLATVELNNTVRQMELART 241
Query: 253 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRS 312
+ + +L LT ++ + +E+ + +D++ ARA + P +
Sbjct: 242 QEIQRILRKLTAEIAQNARILEENCAILSTIDLIFARARLAREMEAYPPTL--------- 292
Query: 313 LTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGN 372
R ++L +A HPL L R K+
Sbjct: 293 -------------NRNGRVHLKRARHPL----------------------LPRDKV---- 313
Query: 373 AARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLA 432
VPIDI + + VL+ITGPNTGGKT+ +KT+GL
Sbjct: 314 --------------------------VPIDIELGKSFSVLLITGPNTGGKTVSMKTLGLL 347
Query: 433 VMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSL 492
++A++G + ++ +++P + +++ADIGDEQS+ QSLSTFS H + I II ++ L
Sbjct: 348 ALLAQTGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAEQGDL 407
Query: 493 VLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
+LLDE+GAGT+P EG AL S++E F ++ T+ATTH+ LKT Y+ ENA +EF
Sbjct: 408 ILLDEVGAGTDPDEGAALARSIIEHFLRR-NICTVATTHYAALKTFAYTQTGVENASVEF 466
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D L+PTY++L G+PG S+A +I+ +LGL +V A V+ E+E+ K
Sbjct: 467 DLKTLRPTYRLLIGIPGASNAFSISRQLGLSPDIVARAEIYISEEHTHFENVVNELEQEK 526
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQ-RFRKVQKISDAAAIARSLVHK 671
+ EAR+ ++ ++ L R L C + F K+++ L+HK
Sbjct: 527 KDY-----EARNHMLHAKEAE---LTAREARL--CTERDTFTKMRQ---------ELLHK 567
Query: 672 SAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT 731
+ C A+ + + A++ S + V + + + + VE A
Sbjct: 568 A----CEEANNIVRMARRSAEETIKSLKEQFDDHGVKERRKAIQEARDRLNEAYVEGDAQ 623
Query: 732 ASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
+ SV K ++ GD+V++ S ++GTV+ ++ +E+ VQVG ++ I+K
Sbjct: 624 RNESVGKPVRAGE-------VQSGDIVYIPSLAQEGTVLAIQ--GKELTVQVGGLRTIVK 674
Query: 792 F 792
Sbjct: 675 M 675
>gi|433655413|ref|YP_007299121.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293602|gb|AGB19424.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 786
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI +++ LVITGPNTGGKT+ LKTVGL +MA SGL+I + E + V +FD++F
Sbjct: 314 VPISVYLGDSFDTLVITGPNTGGKTVTLKTVGLLTLMAMSGLNIPTDEGSSVAFFDNIFV 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++ TS SLVLLDE+GAGT+P EG AL MS+L+ F
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTNIVTILNSVTSNSLVLLDELGAGTDPTEGAALAMSILD-F 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ TIATTH+ ELK ND ENA +EFD L+PTY++ G+PG+S+A I+
Sbjct: 433 LHRINCRTIATTHYSELKQYALKNDGVENASVEFDVETLRPTYRLTIGIPGKSNAFEISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEME 609
RLGL ++ NAR + ++I ++E
Sbjct: 493 RLGLNEEIIDNARNYITNEELKFEDIIKDLE 523
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 53/293 (18%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
R LE+DK+ + + + + G+E L N + + +D+ N A+ + +G+
Sbjct: 6 FRNLEFDKIVNHIVNLCDSEPGKEMALDIKPYDN--LDKAAKEIDKVNEAVSFISSYGNM 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDA----- 167
S +D L K+ I+ S L + + + L + ++ LR+ +E
Sbjct: 64 SFAFKKIDDILNKAKIK-----STLNIGQLMTISRFLSLAGRVKSYLRSEKEESNYPLLR 118
Query: 168 DLYIRFMPLTQMLYQLMDML------------------------IRNENNESLFLEVSSI 203
+ IR L LY+ +D + I N+ ++L ++S
Sbjct: 119 EYNIRLTNLRD-LYERIDRIVISEDELSDDASPALKDIRRQKAHINNKIKDTLNYIIASS 177
Query: 204 HGRL-----CIRTGADQL--------SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQAR 248
L IR G + +FKGL+ SSSG IEP++ V LN++L+Q
Sbjct: 178 SKELQDPIITIRNGRYVVPVKQEYRGTFKGLIHDQSSSGATLFIEPMTVVELNNDLRQLE 237
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ E +L LT+ + + EI + + + +LDV+ A+A YS++ + P
Sbjct: 238 IKEQQEIEKILSELTDDISQHISEIHENMIALTELDVIFAKAKYSINTNSSKP 290
>gi|20808111|ref|NP_623282.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter tengcongensis MB4]
gi|254479026|ref|ZP_05092382.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
gi|23821879|sp|Q8R9D0.1|MUTS2_THETN RecName: Full=MutS2 protein
gi|20516697|gb|AAM24886.1| MutS-like ATPases involved in mismatch repair, family 1
[Thermoanaerobacter tengcongensis MB4]
gi|214035022|gb|EEB75740.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
Length = 790
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 152/223 (68%), Gaps = 2/223 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI I R+ LVITGPNTGGKT+ LKTVGL +MA +G++I + E +++ F+ VF
Sbjct: 317 VPIDIHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFV 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + SLVLLDE+GAGT+PLEG+AL MS+L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSILKKVNKNSLVLLDELGAGTDPLEGSALAMSILDFL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+G TIATTH+ ELK ENA +EFD L+PTY+++ G+PGRS+A I+
Sbjct: 437 HRTGC-RTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRLIIGIPGRSNAFEISR 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
RLGL +++NA+ + +VI ++E K + LE+ ++
Sbjct: 496 RLGLSEEIIENAKSYMSGEAIRFEDVIKDVEE-KRKDLENAYQ 537
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 218 FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
FKG++ SS+G IEP+ V LN+EL++ K E +L L+++++ + + I K
Sbjct: 208 FKGIIHDQSSTGATLFIEPIQVVDLNNELRELELKEQKEIERILFELSQEVKKNAEAIFK 267
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ + +LD + A+A YS+ + P +
Sbjct: 268 DVEVVSELDFLFAKARYSIKIKASRPEL 295
>gi|352684296|ref|YP_004896281.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
gi|350278951|gb|AEQ22141.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
Length = 790
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 221/405 (54%), Gaps = 37/405 (9%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
LE VP+DI + + L+ITGPNTGGKT+ LKTVGL +MA++GL L +E A P
Sbjct: 309 LEQESIVPLDIELGQDFTTLLITGPNTGGKTVALKTVGLFALMAQAGL-FLPAEEAIFPV 367
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F V+ADIGDEQS+ QSLSTFSGH+K + +II ++T + LVL+DE+ GT+P EG AL M
Sbjct: 368 FSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATDRDLVLVDEVCVGTDPTEGAALAM 427
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
+++E F ++ +LTI TTH+ ELKT Y ++ +NA +EFD L+PTY++L GVPG S+
Sbjct: 428 AMIEHFYKA-HVLTIMTTHYSELKTFAYEHEGMQNASVEFDPETLRPTYRLLMGVPGSSN 486
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ RLGLP ++ AR + + V+ +E + ++ E + L +
Sbjct: 487 AFYISRRLGLPEDILDEARTFINERHSNMERVLQNLEGERREY-ESRKDEIETLRRETEI 545
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+N L+ + LE + RK ++ DA + R+ + +Q + L RAQ
Sbjct: 546 LRNQLKAEKTRLEKSRNDILRKARE--DADELYRN-ARRESQGI---------LKELRAQ 593
Query: 693 QLRPSASQSLHCTKVGK-NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 751
Q + +S ++ + ++ L+ NF + + E S +
Sbjct: 594 Q---NLVESAKVERLAEMSRKALSKNFSISGRTEPEGQGLTSGNAA-------------- 636
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
VG +V V + G++G + V + ++ V +G MK + D +
Sbjct: 637 --VGKVVFVKTLGQEGKITAV--NGRDVTVAIGVMKMNVSMKDCI 677
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 187 LIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLN 241
L+ + NN+ F + V+ R I + +L+F G++ SSSG IEP++ V LN
Sbjct: 172 LLHDPNNQKYFQDALVTMREDRYVIPIKQEYRLNFPGIVHDQSSSGATLFIEPMAVVNLN 231
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+++++ E +L LT + + D I + L + Q+D+++A+A Y+ + G P
Sbjct: 232 NDIKKYVLEEKAEVERILRTLTSHVGAEADHILESLAVVAQVDLISAKALYAEALGARRP 291
Query: 302 NIFLPQDMK 310
+ L ++
Sbjct: 292 MMVLDHHLR 300
>gi|306834300|ref|ZP_07467417.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
gi|304423473|gb|EFM26622.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
Length = 778
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 220/397 (55%), Gaps = 37/397 (9%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L PV D+ + V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +KV F+
Sbjct: 307 LTDPVANDLHFLDELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFN 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + SLVL+DE+GAGT+P EG +L +++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGASLAIAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE + T+ATTH+ ELK +F ENA MEFD L PTY + GVPGRS+A
Sbjct: 427 LEHL-RLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A +L + ++N +I +E E HE+R L + + +
Sbjct: 486 EIARRLGLAEIIVNEAERLTD-SDTDVNHIIERLE-------EQNHESRKRLDHIKEVEQ 537
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
+ L+ R + + K +++ A A A+ +V K+ + S ++L H RA L
Sbjct: 538 DNLKFNRAVKKLYNEFSHAKDKELEKARAKAQEIVDKA---MTESEEILKNL-HDRA-SL 592
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+P H K+Q + K+ S + V + R P V
Sbjct: 593 KP------HEVIEAKSQ-----------LKKLAPEVDLSKNKVLKKAKKLRA-----PRV 630
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD + V+++G++GT++ + + VQVG +K +K
Sbjct: 631 GDDIVVTAYGQRGTLVN-QGKNGKWEVQVGLIKMTLK 666
>gi|293378174|ref|ZP_06624343.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
gi|292643038|gb|EFF61179.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
Length = 786
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVEILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|300813660|ref|ZP_07093982.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512202|gb|EFK39380.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 788
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 280/595 (47%), Gaps = 122/595 (20%)
Query: 204 HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLL 260
GR I + S KGL+ +S SG IEP+ V N+E++ + + E +L
Sbjct: 195 EGRYVIPVRNENKSKVKGLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILK 254
Query: 261 ALTEKMQVDLDEIEKMLNGII--QLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
L+E++ IE N +I ++D + A+ SL G P +
Sbjct: 255 ELSEEVAEVSTSIES--NELILREIDFIFAKGKLSLDMGANLPKV--------------- 297
Query: 319 TSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGE 378
+ I L AYHPLL RK+
Sbjct: 298 -------NKNRYIDLKNAYHPLL-----------------------NRKI---------- 317
Query: 379 KDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
VPI+I+I + L+ITGPNTGGKT+ LKT+G+ +MA+
Sbjct: 318 -------------------AVPINIYIGKDFTSLIITGPNTGGKTVTLKTLGILQLMAQY 358
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GLHI + E ++V F+++FADIGDEQS+ Q+LSTFS H+ I I+ + SLVL DE+
Sbjct: 359 GLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEILEKVDEDSLVLFDEL 418
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL S+++ E + I+TTH+ +LK + + +NA MEFD L
Sbjct: 419 GAGTDPTEGAALARSIMDFMLER-KIRCISTTHYNQLKIYALTTEGVKNASMEFDINTLS 477
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTYK+L G+PG+S+A I++RLGL ++ +AR L + E +V+ +E+ +T+
Sbjct: 478 PTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEKVLASIEKDRTK---- 533
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
R F L++ HK+ L + LE+ +++KI ++ A+++
Sbjct: 534 ---TREFKELAKR-HKSDLEKQNARLEN-------ELKKIENSKEKILKEAKDEARRILL 582
Query: 679 SASQARSLVHKRAQQLRP--SASQSLHCTKVG---KNQHVLTSNFQQTTVDKVEHPATAS 733
S + L+ L+ S+ Q+ + G +N N ++ ++K + P
Sbjct: 583 STKENVDLILDEISSLKAEISSDQARRIQESGDLLRNSIRKVDNDKKFVIEKAKKP---- 638
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
++DIK VGD V +SFG TV+++ SK I +Q G MK
Sbjct: 639 ---IEDIK------------VGDQVR-NSFGNISTVLELPDSKGNIYIQSGIMKM 677
>gi|440781736|ref|ZP_20959964.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
gi|440220454|gb|ELP59661.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
Length = 788
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 213/397 (53%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V +D+++ R LV+TGPNTGGKT+ LKTVGL +MA SG+ I + E + V +F VFA
Sbjct: 315 VAMDVYLGRDFTSLVVTGPNTGGKTVTLKTVGLLELMAMSGILIPARENSTVSFFKEVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I NI+ ++ S SLVL DE+GAGT+P EG AL +++LE
Sbjct: 375 DIGDEQSIEQSLSTFSSHMTNIVNIMGKADSNSLVLFDELGAGTDPTEGAALAVAILENL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E + L ATTH+ ELK + ENA +EFD LKPTY++L G+PG+S+A I++
Sbjct: 435 RERNTKLA-ATTHYSELKAYALKTEGVENASVEFDVETLKPTYRLLIGIPGKSNAFEISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ AR+ + + + ++I + + + ++ AR ML +N + +
Sbjct: 494 RLGLPDYIIDEARKGISSDTLKFEDLI---QTLQEKSIKAEENARRSEML-KNEAEKIKE 549
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ L S R + + + + A+ + A + + K ++L
Sbjct: 550 KYEEKLYSLNSSREKALNE-----------GRREAKNIIAEAKEEADRILKNIRELERMG 598
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
S K+ + + L N + E A +S K + RVK G+ V
Sbjct: 599 YSSGTRAKLEEERKKLKENLENA-----EESALKNSQNHKGLN---RVKE------GEEV 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++ S KG V+ SK E+ +Q G MK +K D+
Sbjct: 645 YIPSLNMKGIVLSQPDSKGEVQIQAGIMKINVKLKDL 681
>gi|389575981|ref|ZP_10166009.1| MutS2 family protein [Eubacterium cellulosolvens 6]
gi|389311466|gb|EIM56399.1| MutS2 family protein [Eubacterium cellulosolvens 6]
Length = 791
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 284/596 (47%), Gaps = 110/596 (18%)
Query: 205 GRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ S G++ S G+ IEP++ V LN+++++ K E +L
Sbjct: 193 GRYCVPVKAENRSAVPGMIHDQSSTGATLFIEPMAIVKLNNDIRELELKEQKEIEVILAT 252
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L+ +++I L + +LD + AR +L DMK + EPV +
Sbjct: 253 LSASAAEHVEDISYDLQNLAELDFIFARGGLAL-------------DMKAT---EPVFNT 296
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
E I L KA HPL + +H+
Sbjct: 297 ------EGRINLRKARHPL-IDKHR----------------------------------- 314
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
VPID+ + +L++TGPNTGGKT+ LKTVGL +M ++GLH
Sbjct: 315 ----------------VVPIDVHLGDSFDLLIVTGPNTGGKTVSLKTVGLLTLMGQAGLH 358
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I + + +++ F V+ADIGDEQS+ QSLSTFS H+ I + I ++ SLVL DE+GAG
Sbjct: 359 IPTLDRSELSVFTEVYADIGDEQSIEQSLSTFSSHMTNIVSFIEKADRNSLVLFDELGAG 418
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L G + T+ATTH+ ELK S D ENA EF+ L+PTY
Sbjct: 419 TDPTEGAALAIAILSHLHRQG-IRTMATTHYSELKIFALSTDKVENASCEFNIETLQPTY 477
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
++L GVPG+S+A I+ +LGLP ++ +A+ +V+ +E+ + + +E
Sbjct: 478 RLLIGVPGKSNAFAISSKLGLPDYIIDDAKGQISEQDESFEDVLSSLEQNR---IAQENE 534
Query: 622 ARHFLMLSRNLHK--NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
R + L K L+ R + LE +Q+ + ++K ++ AR+++
Sbjct: 535 QRAIEYRKQQLEKLEKELKNRERTLE---TQKNKIIEKANEQ---ARTVLQ--------- 579
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD 739
A++ + + R ++ ++ + ++ L + E TAS + VK
Sbjct: 580 --DAKTYADQVMKDFRKFGKAGVNSAEMERKRNEL----------RKEMDKTASKAQVKP 627
Query: 740 IKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+++ + R + +G V V S KGTV S+ + V++G ++ + +D+
Sbjct: 628 AERTGKKVRPQDLQLGTAVKVLSLNLKGTVSSKPDSRGNLFVRMGIIRSKVNISDL 683
>gi|254557071|ref|YP_003063488.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum JDM1]
gi|254045998|gb|ACT62791.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum JDM1]
Length = 787
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 291/592 (49%), Gaps = 109/592 (18%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I A+ S F G++ S+SG IEP + + +ND L+Q + + + E+ +L L
Sbjct: 197 RYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEEL 256
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + DEI + D +NA+A Y+ T P + PQ+
Sbjct: 257 SNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPAVS-PQN-------------- 301
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+YL +A HPL
Sbjct: 302 -------EVYLRQARHPL------------------------------------------ 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ P ++ V DI + + +VITGPNTGGKTI LKT+GL +MA+SGL I
Sbjct: 313 IDPRKV----------VANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFI 362
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++V ++ +FADIGDEQS+ Q+LSTFS H++ I + ++Q + SLVL+DE+GAGT
Sbjct: 363 PVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGT 422
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKPTY+
Sbjct: 423 DPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYR 481
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PGRS+A++IA+RLG+P +V AR L S ++N +I ++ + Q +
Sbjct: 482 LLVGIPGRSNALDIAQRLGIPQTIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHL 541
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ + S LH+ L E A Q+ RK Q I DA A ++V + S ++
Sbjct: 542 KTQVADSEKLHRQLKS------EFNAYQQ-RKDQLIEDAKVQANTIVEQ-------SKTK 587
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
A +++ ++ S + ++ ++ + L + QQ P + V++
Sbjct: 588 ADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQ--------PKLKKNRVLR---- 635
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
R K + GD V V S+G++G +++ + K E VQ+G +K MK +D
Sbjct: 636 --RAKAQHDFHEGDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILK--MKISD 682
>gi|270293330|ref|ZP_06199539.1| DNA mismatch repair protein MutS [Streptococcus sp. M143]
gi|270278179|gb|EFA24027.1| DNA mismatch repair protein MutS [Streptococcus sp. M143]
Length = 778
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 218/389 (56%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP VP D+ ++ V+VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVPNDVHFGKELTVIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E + E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------DQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V+
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVL--- 620
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
Q + KRT P VGD + V S+G++GT+
Sbjct: 621 -QKAKKKRT--PKVGDDIVVLSYGQRGTL 646
>gi|418966331|ref|ZP_13518074.1| MutS2 family protein [Streptococcus constellatus subsp.
constellatus SK53]
gi|383340349|gb|EID18656.1| MutS2 family protein [Streptococcus constellatus subsp.
constellatus SK53]
Length = 776
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 212/386 (54%), Gaps = 40/386 (10%)
Query: 390 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 444
+ L + HP V D++ A +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IRLLHVTHPLIENAVANDLYFASDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILA 356
Query: 445 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 504
++V FD +FADIGDEQS+ QSLSTFS H+ I I+ QS SLVLLDE+GAGT+P
Sbjct: 357 DNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQSDENSLVLLDELGAGTDP 416
Query: 505 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 564
EG AL M++LE + T+ATTH+ ELK +NA MEFD L+PTY+ +
Sbjct: 417 QEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFM 475
Query: 565 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 624
GVPG S+A IA RLGL VV++A++L S ++N +I ER + Q L E+R
Sbjct: 476 QGVPGCSNAFEIARRLGLSDRVVKDAQELTDTDS-DVNRII---ERLEEQTL----ESRK 527
Query: 625 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 684
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 685 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 744
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHDKSSLKPHEIIEAKSQLKKL----APETVDLSQNKVLKQAK 624
Query: 745 RVKRTELPNVGDLVHVSSFGKKGTVI 770
+ ++ P VGD + V S+G++GT++
Sbjct: 625 KARK---PKVGDDILVISYGQRGTLV 647
>gi|319946241|ref|ZP_08020481.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|417919657|ref|ZP_12563185.1| MutS2 family protein [Streptococcus australis ATCC 700641]
gi|319747623|gb|EFV99876.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|342832285|gb|EGU66584.1| MutS2 family protein [Streptococcus australis ATCC 700641]
Length = 778
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L++ HP VP DI + +VITGPNTGGKTI LKT+GLA +MA+SGL IL
Sbjct: 296 EIQLLQVRHPLIEKAVPNDIHFGKDLTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ +KV F +F+DIGDEQS+ QSLSTFS H+ I +I+ Q +SLVLLDE+GAGT+
Sbjct: 356 ADTGSKVAVFTQIFSDIGDEQSIEQSLSTFSSHMTNIVSILEQVDEESLVLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG +L +++LE G + T+ATTH+ ELK +NA MEFD L+PTY+
Sbjct: 416 PQEGASLAIAILEDLRLRG-IKTMATTHYPELKAYGIETLGVQNASMEFDTDSLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA RLGL ++V+ A+ + ++N +I E+ + Q L E+R
Sbjct: 475 MQGVPGRSNAFEIARRLGLSEVIVRQAQGMTN-QDRDVNRII---EKLEAQTL----ESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R++ + L+ R K+ +R ++ K K AQ++
Sbjct: 527 KRLDSIRDVEQENLKFNRVLKKLYNELTRERETELNK-----------ARKEAQEIV--- 572
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
L + Q+ Q LH K ++ + Q + P T S K +
Sbjct: 573 ----DLALAESDQI----LQGLHAKSQLKPHEIIEAKSQLKKLS----PETVDLSKNKVL 620
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
KQ+ K+ P VGD + V S+G++G++ K
Sbjct: 621 KQA---KKARAPKVGDEILVISYGQRGSLTK 648
>gi|163791552|ref|ZP_02185956.1| MutS2 family protein [Carnobacterium sp. AT7]
gi|159873188|gb|EDP67288.1| MutS2 family protein [Carnobacterium sp. AT7]
Length = 788
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 230/418 (55%), Gaps = 41/418 (9%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E +V L HP V DI I + + ++ITGPNTGGKTI LKT+GL +M +SG
Sbjct: 298 ENEVKLLSARHPLLDPESVVANDILIGGENQAVIITGPNTGGKTIILKTLGLLQLMGQSG 357
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L + + +++ F +FADIGDEQS+ QSLSTFS H+ I +I+ + ++SL++ DE+G
Sbjct: 358 LQLPVAPDSQMGLFTEIFADIGDEQSIEQSLSTFSSHMTNIVSILDRIDNKSLIIFDELG 417
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL +++L+ GS + + T+H+ ELK Y+ NA MEFD L P
Sbjct: 418 AGTDPQEGAALAIAILDRVGAVGSYVMV-TSHYPELKAYGYNRPQTINASMEFDIDTLSP 476
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TY++L GVPGRS+A I++RLGL V+ +ARQL S +NE+I ++E +
Sbjct: 477 TYRLLIGVPGRSNAFEISKRLGLSEEVIDSARQLIDGESQNLNEMISDLENRRKMAETEY 536
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRF--RKVQKISDAAAIARSLVHKSAQQLC 677
E RH++ + LH +L A Q+F + + + A A SLV ++ +
Sbjct: 537 LEVRHYVDEAEQLHADL---------QTAVQQFYAEREELLKKAREKANSLVEETEE--- 584
Query: 678 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 737
+A+Q + K+ Q L + K ++ + Q + + + E A + V+
Sbjct: 585 -TANQIIKDLRKK---------QILGQYEGVKEHELIDAKTQLSGLRQEE--ALEKNKVL 632
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K + K ++ GD V V SFG+KG +++ + K VVQ+G +K +K +D+
Sbjct: 633 K------KAKAKQVMKPGDDVIVQSFGQKGILME-KADKNHWVVQMGMLKMKLKESDL 683
>gi|306490923|gb|ADM95040.1| mismatch repair ATPase [uncultured candidate division JS1
bacterium]
Length = 793
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 220/397 (55%), Gaps = 42/397 (10%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VPID+ I K +L+ITGPNTGGKT+ LKTVGL +MA+SGLHI + ++V
Sbjct: 313 HPLLKGKVVPIDMEIGEKYDILIITGPNTGGKTVTLKTVGLLHLMAQSGLHIPVAIDSEV 372
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
F +FADIGDEQS+ Q+LSTFS H+K I +I++ + SL+LLDE+GAGT+P EG+AL
Sbjct: 373 TVFQKIFADIGDEQSMEQNLSTFSSHMKNIISILNAADHNSLILLDELGAGTDPSEGSAL 432
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M++L+ F G+ + ++TTHH LK Y + NA +EFDE L+P YK+ G+PG+
Sbjct: 433 AMAILDLFKTKGAKV-LSTTHHDSLKAYAYLTERVRNARVEFDEKTLQPIYKLSIGLPGK 491
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR 630
S A ++A+RLGL IV++ A+ ++ +I +ME K Q +E + + +
Sbjct: 492 SCAFSVAQRLGLSEIVLEKAKNYLEKEKIDLENLIKQMENDKAQLIEDLKDIKE------ 545
Query: 631 NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR 690
KN+ + + ++ E + F K + I ++ + L + ++A+ +++
Sbjct: 546 -EKKNIEKIKEELKEDI--RNFEK-----EKLKIKLEAYQEAERILTTAQNKAKEIIN-- 595
Query: 691 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
L+ + + T+ KN +D ++ + K++ TE
Sbjct: 596 --FLKKKKAGTEEFTEEIKN------------LDDLKKEIKNQAEKYNIFKETGNT-FTE 640
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
G+ V V S K+G +I + K+ +VQVGN+K
Sbjct: 641 ----GESVFVKSLQKEGIIIDKDDKKQTYMVQVGNLK 673
>gi|323702088|ref|ZP_08113756.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333923406|ref|YP_004496986.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532970|gb|EGB22841.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333748967|gb|AEF94074.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 783
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 213/406 (52%), Gaps = 50/406 (12%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP I + + R LVITGPNTGGKT+ LKTVGL +M +SGLHI + +++ F+ VFA
Sbjct: 313 VPATISLGKDFRTLVITGPNTGGKTVTLKTVGLFTLMTQSGLHIPAEAGSEMGIFNQVFA 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I NI++++ + SLVLLDE+GAGT+P EG AL ++LE
Sbjct: 373 DIGDEQSIEQSLSTFSSHMTNIVNILNRADTGSLVLLDELGAGTDPTEGAALARAILEEL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ TIATTH+ ELK Y+ ENA +EFD L+PTY++L G PGRS+A I+
Sbjct: 433 HGRGA-CTIATTHYSELKNYAYTTPGVENASVEFDVETLRPTYRLLIGRPGRSNAFEISA 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLS--------R 630
RLGL +VQ ARQ ++ ++I ++E+ + Q E E L R
Sbjct: 492 RLGLQPAIVQRARQFLTTEQVQVADLINKLEQTQ-QAAERDREEAAILRRESEEIKERYR 550
Query: 631 NLHKNLLRTRRKILEHCASQRFRKVQKISDAAAI-ARSLVHKSAQQLCPSASQARSLVHK 689
L + L R ILE + + K+ A+ + A V + +L + ++ R K
Sbjct: 551 QLEEQLREKREAILEKA----YEEASKLVRASRLEAEEAVKELRAKLAQANARDREEAIK 606
Query: 690 RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
+A+Q K Q V + V E T + + +K
Sbjct: 607 QARQ---------------KLQRVTSK------VAAKEPERTTPGEIPRQVKP------- 638
Query: 750 ELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G+ V + + +K V+ V S + + VQVG MK + ++
Sbjct: 639 -----GEQVFLPKYNQKAYVLSV--SGDNVQVQVGIMKMFVPLKEL 677
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP++AV N+E+++ + + + +L+ L+ + +++ ++ + QL
Sbjct: 213 SASGATLFIEPMAAVEANNEVRRLMVAEQQEIQKILVELSNGVSAIAEDLTITMDALGQL 272
Query: 284 DVVNARATYSLSFGGTSPNIF 304
D + A+A YS + SP I
Sbjct: 273 DFIMAKARYSRTLNALSPTII 293
>gi|254526388|ref|ZP_05138440.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
gi|221537812|gb|EEE40265.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
Length = 803
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 226/432 (52%), Gaps = 78/432 (18%)
Query: 216 LSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEI 273
+ FKG++ SS G+ + EP S V +++ A + E +L ++ + + + +
Sbjct: 217 IKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARIIAEEFKLLKKWSQIVSDNSENL 276
Query: 274 EKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYL 333
+M + +++L+ R+ YS GG +P + P+ S V S
Sbjct: 277 IEMSSILLRLENALTRSRYSKWIGGKTP----------TFEKNPIISLVGFS-------- 318
Query: 334 PKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSAL 393
HPLL+ +HK+K +P
Sbjct: 319 ----HPLLIWEHKKKG----------------------------------APP------- 333
Query: 394 ELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
PV +D I R +V+ ITGPNTGGKT LK +GL+++MA++GL I S+ +P+
Sbjct: 334 ----PVAVDFHINRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFC 389
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQ---SLVLLDEIGAGTNPLEGTAL 510
+++ DIGD QSL ++LSTFSGH+ +I I+ ++ S+VLLDEIG+GT+PLEG+AL
Sbjct: 390 PNIYVDIGDNQSLEENLSTFSGHISRIKEILDSLNNKKGLSVVLLDEIGSGTDPLEGSAL 449
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M+LL+ FA S +T+ATTH+G++K LKY++ FEN + FDE LKP Y + WG+PGR
Sbjct: 450 AMALLKEFANK-SDITLATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGR 508
Query: 571 SSAINIAERLGL-PGIVVQNARQLYGAASAEINEVI--IEMERFKTQFLEHVHEARHFLM 627
S+A++I++R+GL I+ + A L IN++I +E ER K Q A +
Sbjct: 509 SNALSISKRIGLDENILNEAANYLRPKEVDNINDIIKGLEEERIKQQ--NSAEAAAELIA 566
Query: 628 LSRNLHKNLLRT 639
+ LH L R
Sbjct: 567 RTEILHDELKRN 578
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L +SSF+ T +G+ A L+ + I Y+ S RLL+ET E++ +
Sbjct: 19 ESISLLEWDSLKVHLSSFSSTEMGKRAILS--FGIPSEYELSKRLLNETVEINELENNLD 76
Query: 112 CSLDLTGV 119
S+ + V
Sbjct: 77 KSISFSNV 84
>gi|331083698|ref|ZP_08332809.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403909|gb|EGG83461.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 792
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 175/620 (28%), Positives = 271/620 (43%), Gaps = 148/620 (23%)
Query: 200 VSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEE 256
V+ +GR CI A+ G++ S GS + EP++ V LN++L++ E
Sbjct: 188 VTMRNGRYCIPVKAEHKGQVPGMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIE 247
Query: 257 DVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHE 316
+L L++ +L+ IE L + QLD + ARA + + T P
Sbjct: 248 IILSNLSQYAAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRF------------- 294
Query: 317 PVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARK 376
+ I L KA HPL+ +HK
Sbjct: 295 ---------NTKGIIDLKKARHPLI-DKHK------------------------------ 314
Query: 377 GEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMA 436
VPID+ + +LV+TGPNTGGKT+ LKT+GL +M
Sbjct: 315 ---------------------VVPIDVRLGEDFDLLVVTGPNTGGKTVSLKTIGLLTLMG 353
Query: 437 KSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLD 496
+SGLHI + + +++ F V+ADIGDEQS+ QSLSTFS H+ + I ++ SLVL D
Sbjct: 354 QSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMTNVVRFIEKADRDSLVLFD 413
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
E+GAGT+P EG AL +++L G + T+ATTH+ ELK S ENA EFD
Sbjct: 414 ELGAGTDPTEGAALAIAILSHLHAQG-IRTMATTHYSELKVYALSTHGVENASCEFDVET 472
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNA---------------------RQLYG 595
L+PTY++L G+PG+S+A I+ +LGLP ++ A R+
Sbjct: 473 LRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAKEQISQEDESFEDVLSTLEQSRKTIE 532
Query: 596 AASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKV 655
A AEI E+E KTQ E L + + +IL + R +
Sbjct: 533 AEEAEIARYKTEIESLKTQLEEK--------------QDKLEQRKERILRDANEEAHRIL 578
Query: 656 QKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLT 715
++ + A + +K+ ++ S+ K +Q R + + T GK + T
Sbjct: 579 REAKEYADQTMKIFNKAGKE---------SMSAKELEQKRSELRKKMDTT--GKKMALKT 627
Query: 716 SNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPS 775
+++T+ KDI ++GD V V S KGT+ +
Sbjct: 628 PEKKKSTL------------TAKDI------------SLGDAVKVLSLNVKGTISSKPDA 663
Query: 776 KEEIVVQVGNMKWIMKFTDI 795
K + VQ+G ++ + +D+
Sbjct: 664 KGMVFVQMGILRSKVHLSDL 683
>gi|239629718|ref|ZP_04672749.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301065846|ref|YP_003787869.1| mutS family ATPase [Lactobacillus casei str. Zhang]
gi|417980047|ref|ZP_12620732.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|418004482|ref|ZP_12644505.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
gi|239528404|gb|EEQ67405.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438253|gb|ADK18019.1| MutS family ATPase [Lactobacillus casei str. Zhang]
gi|410525947|gb|EKQ00841.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|410549791|gb|EKQ23945.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 225/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LPG++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|380033002|ref|YP_004889993.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum WCFS1]
gi|81733674|sp|Q88V16.1|MUTS2_LACPL RecName: Full=MutS2 protein
gi|342242245|emb|CCC79479.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum WCFS1]
Length = 787
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 291/592 (49%), Gaps = 109/592 (18%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I A+ S F G++ S+SG IEP + + +ND L+Q + + + E+ +L L
Sbjct: 197 RYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEEL 256
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + DEI + D +NA+A Y+ T P + PQ+
Sbjct: 257 SNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPAVS-PQN-------------- 301
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+YL +A HPL
Sbjct: 302 -------EVYLRQARHPL------------------------------------------ 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ P ++ V DI + + +VITGPNTGGKTI LKT+GL +MA+SGL I
Sbjct: 313 IDPRKV----------VANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFI 362
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++V ++ +FADIGDEQS+ Q+LSTFS H++ I + ++Q + SLVL+DE+GAGT
Sbjct: 363 PVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGT 422
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKPTY+
Sbjct: 423 DPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYR 481
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PGRS+A++IA+RLG+P +V AR L S ++N +I ++ + Q +
Sbjct: 482 LLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHL 541
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ + S LH+ L E A Q+ RK Q I DA A ++V + S ++
Sbjct: 542 KTQVADSEKLHRQLKS------EFNAYQQ-RKDQLIEDAKVQANTIVEQ-------SKTK 587
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
A +++ ++ S + ++ ++ + L + QQ P + V++
Sbjct: 588 ADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQ--------PKLKKNRVLR---- 635
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
R K + GD V V S+G++G +++ + K E VQ+G +K MK +D
Sbjct: 636 --RAKAQHDFHEGDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILK--MKISD 682
>gi|392531789|ref|ZP_10278926.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 788
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 232/422 (54%), Gaps = 40/422 (9%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L E V ++ HP V DI I + LVITGPNTGGKTI LKT+GL +M
Sbjct: 294 LVNEENDVRFIQARHPLIDEKQAVANDILIGGDYQALVITGPNTGGKTITLKTLGLLQLM 353
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
+SGL + +E +++ F VFADIGDEQS+ QSLSTFS H+ I +I+++ ++SL+L
Sbjct: 354 GQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSILNKIDNKSLILF 413
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL +++L+ GS + +ATTH+ ELK Y+ NA MEFD
Sbjct: 414 DELGAGTDPQEGAALAIAILDQVGAVGSYV-MATTHYPELKAYGYNRPGTINASMEFDVE 472
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME-RFKTQ 614
L PTY++L GVPGRS+A I++RLGL V+ +AR L S +NE+I ++E R K
Sbjct: 473 TLSPTYRLLIGVPGRSNAFEISKRLGLDTAVIDSARSLIDGESQNLNEMIADLENRRKMT 532
Query: 615 FLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQ 674
+E+ HE R ++ + L+++L LE +R LV K+ +
Sbjct: 533 EMEY-HEVRQYVEEAETLYQDLTTA----LEQFFGER--------------EDLVKKARE 573
Query: 675 QLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS 734
+ S+A K LR Q + G +H L ++ + + H T +
Sbjct: 574 KANQIVSEAEEEASKIVSDLRK--MQLTGQFEGGIKEHELID--AKSKLANLHHEETLTK 629
Query: 735 SVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFT 793
+ V ++ + + GD V V+S+G++GT++ KVE + +VQ+G +K +K +
Sbjct: 630 NKVLKKAKAKQQFKK-----GDEVIVASYGQRGTLMEKVEGNN--WLVQLGILKMKIKES 682
Query: 794 DI 795
D+
Sbjct: 683 DM 684
>gi|229163542|ref|ZP_04291492.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
gi|228619924|gb|EEK76800.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCAS--QRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R KVQK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIVEFNEDRDERLLKVQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|357236448|ref|ZP_09123791.1| putative MutS2 protein [Streptococcus criceti HS-6]
gi|356884430|gb|EHI74630.1| putative MutS2 protein [Streptococcus criceti HS-6]
Length = 780
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 228/400 (57%), Gaps = 40/400 (10%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ ++ V+VITGPNTGGKTI LKT+GL+ +MA+SGL IL+ +KV F
Sbjct: 307 LVNPVANDLHFSKNLSVIVITGPNTGGKTIMLKTLGLSQIMAQSGLPILADSGSKVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I +I+ ++ QSLVLLDE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMGHIVDILDRADDQSLVLLDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK +NA M FD L+PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMATTHYPELKAYGIETAHVQNASMAFDIDSLRPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL ++V +A Q+ S + N +I E+ +TQ E+R L R++ +
Sbjct: 486 EIARRLGLAKVIVDDAEQMTNRES-DTNAII---EQLETQ----TAESRQRLDHIRDVEQ 537
Query: 635 NLLRTRR--KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
L+ R K L + S + K K+ A R LV ++ + ++Q ++ R+
Sbjct: 538 ENLKFNRAVKKLYNEFSHAYDK--KLEQAQDEIRQLVARATNE----SNQILKNLNDRS- 590
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
QL+P H K + + + + +KV ++++ + + P
Sbjct: 591 QLKP------HEVIEAKGKLKKLAPSEDLSKNKV-------------LRKAKKQRAARAP 631
Query: 753 NVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 791
VGD + V ++G++GT+I +++ + E QVG +K I+K
Sbjct: 632 KVGDDIIVIAYGQRGTLINQLKDGRWE--AQVGLIKMILK 669
>gi|152976937|ref|YP_001376454.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cytotoxicus NVH 391-98]
gi|189030426|sp|A7GTK1.1|MUTS2_BACCN RecName: Full=MutS2 protein
gi|152025689|gb|ABS23459.1| MutS2 family protein [Bacillus cytotoxicus NVH 391-98]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 220/399 (55%), Gaps = 35/399 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI E +++ F ++FA
Sbjct: 318 VPNDIVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 HNRGARV-VATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSERVINRARNHISTDTNKIENMIAKLEESQKNAERDWKEAEELRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K Q K ++ +A + + + +QLR
Sbjct: 555 -QRQIIEFNEERDERLLKAQ--------------KEGEEKVEAAKKEAEAIIRELRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
+ ++ K+ ++ + ++E A K ++ K+ P GD
Sbjct: 600 AQLANV------KDHELIEAK------SRLEGAAPELVKKQKVKVKNTAPKQQLRP--GD 645
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V +FG+KG ++K + S E VQ+G +K +K +D+
Sbjct: 646 EVKVLTFGQKGQLLK-KVSDSEWNVQIGILKMKVKESDM 683
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE+DK+ + +SLGR+ + S + +++ + + D T+ A I ++ H
Sbjct: 5 TLRVLEYDKVKEQLLEHTASSLGRDKVKRLMPSTD--FEEIVEMQDTTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
L G+ ++S ++ + S L P+E L + + + S ++ + + A L
Sbjct: 63 AP----LGGI--FDIRSNVKRAKIGSMLSPHELLDIASTMYGSRQMKRFIEDIVDNGAQL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITGCIGDGGEVLDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNDRYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ + D + + I LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAAEADIVLANVEVIANLDFIFAKALYAKRMKATKP 294
>gi|414084421|ref|YP_006993129.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
gi|412998005|emb|CCO11814.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
Length = 788
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 231/422 (54%), Gaps = 40/422 (9%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L E V ++ HP V DI I + LVITGPNTGGKTI LKT+GL +M
Sbjct: 294 LVNEENDVRFIQARHPLIDEKQAVANDILIGGDYQALVITGPNTGGKTITLKTLGLLQLM 353
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
+SGL + +E +++ F VFADIGDEQS+ QSLSTFS H+ I +I+++ +SL+L
Sbjct: 354 GQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSILNKIDDKSLILF 413
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL +++L+ GS + +ATTH+ ELK Y+ NA MEFD
Sbjct: 414 DELGAGTDPQEGAALAIAILDQVGAVGSYV-MATTHYPELKAYGYNRPGTINASMEFDVE 472
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME-RFKTQ 614
L PTY++L GVPGRS+A I++RLGL V+ +AR L S +NE+I ++E R K
Sbjct: 473 TLSPTYRLLIGVPGRSNAFEISKRLGLDTAVIDSARSLIDGESQNLNEMIADLENRRKMT 532
Query: 615 FLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQ 674
+E+ HE R ++ + L+++L LE +R LV K+ +
Sbjct: 533 EMEY-HEVRQYVEEAETLYQDLTTA----LEQFFGER--------------EDLVKKARE 573
Query: 675 QLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS 734
+ S+A K LR Q + G +H L ++ + + H T +
Sbjct: 574 KANQIVSEAEEEASKIVSDLRK--MQLTGQFEGGIKEHELID--AKSKLANLHHEETLTK 629
Query: 735 SVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMKFT 793
+ V ++ + + GD V V+S+G++GT++ KVE + +VQ+G +K +K +
Sbjct: 630 NKVLKKAKAKQQFKK-----GDEVIVASYGQRGTLMEKVEGNN--WLVQLGILKMKIKES 682
Query: 794 DI 795
D+
Sbjct: 683 DM 684
>gi|297617881|ref|YP_003703040.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145718|gb|ADI02475.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 779
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + +LVITGPNTGGKT+ LKTVGL +MA SGL + ++E ++ D+V+A
Sbjct: 312 VPVDLELGKGFDILVITGPNTGGKTVTLKTVGLLTLMAMSGLFVPAAEGTEIALVDAVYA 371
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++TSQSLVLLDE+GAGT+P+EG ALG ++L
Sbjct: 372 DIGDEQSIEQSLSTFSSHMTNIIDILKRATSQSLVLLDELGAGTDPVEGAALGRAILGEL 431
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + + TTH ELK + ENAC+EFD + L+PTY++ G+PG S+A+ IAE
Sbjct: 432 LAKG-VKAVVTTHQSELKVFAFQEAKVENACVEFDPITLQPTYRLSIGIPGHSNALEIAE 490
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVI 605
RLGL +V+ ARQ + ++ +I
Sbjct: 491 RLGLDHRIVEKARQFVPQSEQDLGRII 517
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
+L LE+DK+ +S A + +G E L +L + S+R ET A+++ +
Sbjct: 5 ALHRLEFDKILEMLSQKACSPMGAEKAL-ELQPVYDLETASMRQ-QETGEALKVLRLRDT 62
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFS-------------------- 152
LTGV ++ +R VR PL E L V AL++ S
Sbjct: 63 GF-LTGV--KDIRQHMRRVRSGVPLSTGELLDVGALVRASRLARDMVEGRECPGLCGLTG 119
Query: 153 -----ETLQLSLRAAIKEDAD-----------LYIRFMPLTQMLYQLMDMLIRNENNESL 196
E ++ ++R +I E + + R + + + +R+ + +
Sbjct: 120 DLFVDEGIERAIRESIDEGGEVRDTASPELKAIRNRIATAKNRVREYLQEFVRSSHYQKF 179
Query: 197 FLE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASV 251
+ ++ GR + A+ S KG++ S+SG +EP + V +N+++++ +
Sbjct: 180 LQDAIITERQGRYVVPVKAEYRSEVKGIIHDESASGATVFVEPEAVVHVNNDIRRLEMAE 239
Query: 252 TKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
+ E +L LT ++ + E+E+ L + LD+V A+ +L +P +
Sbjct: 240 NREIEKILRRLTSLLEPVVSELERDLEILTDLDLVLAKGRLALEMNAVAPRL 291
>gi|418007380|ref|ZP_12647266.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW4]
gi|410549324|gb|EKQ23497.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW4]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 225/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LPG++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|110799497|ref|YP_696563.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens ATCC 13124]
gi|123344633|sp|Q0TP77.1|MUTS2_CLOP1 RecName: Full=MutS2 protein
gi|110674144|gb|ABG83131.1| MutS2 family protein [Clostridium perfringens ATCC 13124]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTMPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|229087099|ref|ZP_04219249.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
gi|228696167|gb|EEL49002.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
Length = 786
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 223/399 (55%), Gaps = 35/399 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 YNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDERLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
+ ++ K+ ++ + + P VK +P+ + GD
Sbjct: 600 AQLANV------KDHELIEAKSRLEGA----APELVKKQKVKVKNTAPK----QQLRAGD 645
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V +FG+KG ++K + S E VQ+G +K +K +D+
Sbjct: 646 EVKVLTFGQKGQLLK-KVSDNEWNVQIGILKMKVKESDM 683
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP V LN+ LQ+AR + E +L+ LTE++ V+ D + + I L
Sbjct: 217 SASGQTLFIEPQVIVELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLANVEVIANL 276
Query: 284 DVVNARATYSLSFGGTSP 301
D + A+A Y+ T P
Sbjct: 277 DFIFAKALYAKRIKATKP 294
>gi|417988978|ref|ZP_12629502.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
gi|410540705|gb|EKQ15217.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 226/396 (57%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEI 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LPG++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP-----RVKRTELP---- 752
+ T G TV E+ A+ + +K + Q R+ R E
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|168214914|ref|ZP_02640539.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
gi|170713649|gb|EDT25831.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTMPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|228923296|ref|ZP_04086584.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582763|ref|ZP_17558874.1| MutS2 protein [Bacillus cereus VD014]
gi|423634569|ref|ZP_17610222.1| MutS2 protein [Bacillus cereus VD156]
gi|228836250|gb|EEM81603.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401211578|gb|EJR18325.1| MutS2 protein [Bacillus cereus VD014]
gi|401280548|gb|EJR86468.1| MutS2 protein [Bacillus cereus VD156]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH++L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRDL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|168215509|ref|ZP_02641134.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
gi|182382254|gb|EDT79733.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTMPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISDAA-AIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|257892933|ref|ZP_05672586.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257829312|gb|EEV55919.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|257886737|ref|ZP_05666390.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|257822791|gb|EEV49723.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|431762509|ref|ZP_19551071.1| MutS2 protein [Enterococcus faecium E3548]
gi|430625201|gb|ELB61851.1| MutS2 protein [Enterococcus faecium E3548]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|390630927|ref|ZP_10258899.1| MutS2 protein [Weissella confusa LBAE C39-2]
gi|390483815|emb|CCF31247.1| MutS2 protein [Weissella confusa LBAE C39-2]
Length = 791
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 154/243 (63%), Gaps = 9/243 (3%)
Query: 373 AARKGEKDTNLSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTIC 425
AA ++ SP E V L+ HP V DI I + +++TGPNTGGKTI
Sbjct: 286 AAATKSQEPEYSP-ENHVRLLQARHPLLDPQKAVANDIIIGEDYKAIIVTGPNTGGKTIT 344
Query: 426 LKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS 485
LKT+GL +MA+SGL I +EY+ V F VFADIGDEQS+ QSLSTFS H+ I I+
Sbjct: 345 LKTLGLLQLMAQSGLFIPVAEYSTVGLFKEVFADIGDEQSIEQSLSTFSSHMVNIVEILK 404
Query: 486 QSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFF 545
Q + SLVL DE+GAGT+P EG AL MS+L+A GS T+ATTH+ ELK Y+
Sbjct: 405 QIDADSLVLFDELGAGTDPQEGAALAMSILDAVGAKGS-YTVATTHYPELKVYGYNRVDT 463
Query: 546 ENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVI 605
NA MEFD L+PTYK L G+PGRS+A+ I++RLGL ++ A L S E+N++I
Sbjct: 464 INASMEFDVETLRPTYKFLLGIPGRSNALEISKRLGLDQSIIDAAASLTTEDSQELNDMI 523
Query: 606 IEM 608
++
Sbjct: 524 ADL 526
>gi|227552101|ref|ZP_03982150.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|424762404|ref|ZP_18189913.1| MutS2 family protein [Enterococcus faecalis TX1337RF]
gi|431033419|ref|ZP_19491265.1| MutS2 protein [Enterococcus faecium E1590]
gi|227178767|gb|EEI59739.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|402424629|gb|EJV56797.1| MutS2 family protein [Enterococcus faecium TX1337RF]
gi|430564520|gb|ELB03704.1| MutS2 protein [Enterococcus faecium E1590]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|423452167|ref|ZP_17429020.1| MutS2 protein [Bacillus cereus BAG5X1-1]
gi|401142238|gb|EJQ49787.1| MutS2 protein [Bacillus cereus BAG5X1-1]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA + S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 643 PGDEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESNM 683
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P+E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|374992901|ref|YP_004968400.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
gi|357211267|gb|AET65885.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
Length = 787
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 221/433 (51%), Gaps = 55/433 (12%)
Query: 380 DTNLSPSEM----QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
D N E+ Q+ ++ HP VP+ + + LVITGPNTGGKT+ LK V
Sbjct: 287 DMNAGSPELVTGQQLKLVQARHPLISGRVVPLSVELGIDFDTLVITGPNTGGKTVALKAV 346
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GL M + GL I + +K+ F +FADIGDEQS+ QSLSTFSGH+K I +II+++
Sbjct: 347 GLMAAMNQCGLQIPAESESKMGVFTQLFADIGDEQSVEQSLSTFSGHMKNIVDIINRADE 406
Query: 490 QSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENAC 549
+SLVLLDE+GAGT+P EG AL M +L E G TI+TTH+G LKT Y +NA
Sbjct: 407 RSLVLLDEVGAGTDPTEGAALAMGILAELHERGC-RTISTTHYGALKTFAYETPRVKNAS 465
Query: 550 MEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
+EFD L+PTY++L G+PG+S+A IA RLGL V+ A+ N + E E
Sbjct: 466 VEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEGVL-----------AKANTFVTERE 514
Query: 610 RFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLV 669
+E++ E R + + K T R+ +E + K ++ + I +L
Sbjct: 515 MQVADLIENLGETRREI----EIEKLKAETGRQAVEKQSKALEEKSNRLDEEVEILLALA 570
Query: 670 HKSAQQLCPSAS-QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEH 728
A +L A +A +L+ + L+ N QQ ++K
Sbjct: 571 RDEASELVREAKREAEALIEELKSALK-------------------KENKQQQDIEKARQ 611
Query: 729 PATASSSVVKDIKQSPRVKRT--ELPN----VGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
+ + Q ++KRT EL +G V+++ +KG V+K+ + E+ VQ
Sbjct: 612 ---GFRKISAKLDQGRQIKRTGGELTADQIMLGQTVYMTKVKQKGQVVKLPNANGEVQVQ 668
Query: 783 VGNMKWIMKFTDI 795
G MK ++ T++
Sbjct: 669 AGIMKVMVPLTEL 681
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
SF G++ S+SG IEP+ V L +EL++ + + +L L+ +++ DEI
Sbjct: 207 SFPGIVHDQSASGATLFIEPMPVVQLGNELREVILKEHREVQRILQMLSAQIEGRADEIA 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
+ + QLD+V A+A SL SP + Q +K P+ S
Sbjct: 267 DLHEALAQLDLVIAKAHLSLDMNAGSPELVTGQQLKLVQARHPLIS 312
>gi|218233457|ref|YP_002369349.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus B4264]
gi|228960821|ref|ZP_04122456.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048260|ref|ZP_04193828.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|229129836|ref|ZP_04258802.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|229147111|ref|ZP_04275470.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|229152748|ref|ZP_04280932.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|296505027|ref|YP_003666727.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|423584921|ref|ZP_17561008.1| MutS2 protein [Bacillus cereus VD045]
gi|423631267|ref|ZP_17607014.1| MutS2 protein [Bacillus cereus VD154]
gi|423657494|ref|ZP_17632793.1| MutS2 protein [Bacillus cereus VD200]
gi|226723046|sp|B7HF67.1|MUTS2_BACC4 RecName: Full=MutS2 protein
gi|218161414|gb|ACK61406.1| MutS2 family protein [Bacillus cereus B4264]
gi|228630726|gb|EEK87371.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|228636360|gb|EEK92831.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|228653527|gb|EEL09399.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|228722985|gb|EEL74362.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|228798843|gb|EEM45822.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296326079|gb|ADH09007.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|401235113|gb|EJR41586.1| MutS2 protein [Bacillus cereus VD045]
gi|401263840|gb|EJR69956.1| MutS2 protein [Bacillus cereus VD154]
gi|401289050|gb|EJR94771.1| MutS2 protein [Bacillus cereus VD200]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|217962033|ref|YP_002340603.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH187]
gi|222098016|ref|YP_002532073.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus Q1]
gi|229141279|ref|ZP_04269817.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|375286547|ref|YP_005106986.1| MutS2 family protein [Bacillus cereus NC7401]
gi|423355034|ref|ZP_17332659.1| MutS2 protein [Bacillus cereus IS075]
gi|423570780|ref|ZP_17547025.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|423603770|ref|ZP_17579663.1| MutS2 protein [Bacillus cereus VD102]
gi|226723047|sp|B7HRJ3.1|MUTS2_BACC7 RecName: Full=MutS2 protein
gi|254766387|sp|B9J054.1|MUTS2_BACCQ RecName: Full=MutS2 protein
gi|217064711|gb|ACJ78961.1| MutS2 family protein [Bacillus cereus AH187]
gi|221242074|gb|ACM14784.1| DNA mismatch repair protein, MutS family [Bacillus cereus Q1]
gi|228642060|gb|EEK98353.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|358355074|dbj|BAL20246.1| MutS2 family protein [Bacillus cereus NC7401]
gi|401085211|gb|EJP93454.1| MutS2 protein [Bacillus cereus IS075]
gi|401203407|gb|EJR10246.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|401246534|gb|EJR52881.1| MutS2 protein [Bacillus cereus VD102]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|228987801|ref|ZP_04147910.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771849|gb|EEM20306.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|257895303|ref|ZP_05674956.1| DNA mismatch repair protein [Enterococcus faecium Com12]
gi|257831868|gb|EEV58289.1| DNA mismatch repair protein [Enterococcus faecium Com12]
Length = 576
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|423373498|ref|ZP_17350837.1| MutS2 protein [Bacillus cereus AND1407]
gi|401096462|gb|EJQ04509.1| MutS2 protein [Bacillus cereus AND1407]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|229093646|ref|ZP_04224746.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
gi|228689733|gb|EEL43540.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|229019772|ref|ZP_04176575.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
gi|229025999|ref|ZP_04182383.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228735280|gb|EEL85891.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228741497|gb|EEL91694.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 221/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K V K ++ +A + + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------VQKEGEEKVEAAKKEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + + + + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FGEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|160937675|ref|ZP_02085035.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
gi|158439320|gb|EDP17072.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
Length = 812
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 219/397 (55%), Gaps = 30/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI++++ R+ +L++TGPNTGGKT+ LKTVGL +M +SGLHI + E +++ FD VFA
Sbjct: 324 VPINVWLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAIFDQVFA 383
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++++ S+SL L DE+GAGT+P EG AL +++L +F
Sbjct: 384 DIGDEQSIEQSLSTFSAHMTNIVRILNEADSRSLCLFDELGAGTDPTEGAALAIAIL-SF 442
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ T+ATTH+ ELK S ENAC EF+ L+PTY++L G+PG+S+A I++
Sbjct: 443 LHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQ 502
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLPG ++ +A+ A +++ +E + + E + +L L +
Sbjct: 503 KLGLPGYIIDDAKSHLEAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKNRLTQ 562
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ E RK + + +A A+ ++ +A+ + +Q+ A
Sbjct: 563 KEERLDE-------RKDKILKNATEEAQRILR-----------EAKETADQTIKQINKLA 604
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ S ++ + L ++T P S + SP+ + +GD V
Sbjct: 605 ASSGVGKELEAERARLRDQLKKTDEKLTVKPKGPSQPI------SPKKLK-----IGDGV 653
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S KGTV + ++ ++ VQ+G ++ ++ D+
Sbjct: 654 KVLSMNLKGTVSTLPNARGDLYVQMGILRSLVNIRDL 690
>gi|169343643|ref|ZP_02864642.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
gi|169298203|gb|EDS80293.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTLPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISDAA-AIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|423470753|ref|ZP_17447497.1| MutS2 protein [Bacillus cereus BAG6O-2]
gi|402434491|gb|EJV66529.1| MutS2 protein [Bacillus cereus BAG6O-2]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA + S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKLHREL-- 554
Query: 639 TRRKILEHC--ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 643 PGDEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S N +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTN--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P+E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|431757245|ref|ZP_19545876.1| MutS2 protein [Enterococcus faecium E3083]
gi|430619534|gb|ELB56361.1| MutS2 protein [Enterococcus faecium E3083]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +++ F+ VFA
Sbjct: 317 VPNDIAIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+
Sbjct: 437 GKK-SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 496 RLGLDTDVINEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDL 553
>gi|418275797|ref|ZP_12891120.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|376009348|gb|EHS82677.1| DNA mismatch repair protein MutS2 [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 787
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 293/592 (49%), Gaps = 109/592 (18%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I A+ S F G++ S+SG IEP + + +ND L+Q + + + E+ +L L
Sbjct: 197 RYVIPVKAENRSRFGGIVHDQSASGQTFFIEPQAVMAMNDRLRQNQVAEKQEEQRILEEL 256
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + DEI + D +NA+A Y+ DMK + EP S
Sbjct: 257 SNLIAPYQDEIINNAAILGHFDFINAKARYA-------------HDMKAT---EPAVSPK 300
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+ +YL +A HPL
Sbjct: 301 NE------VYLRQARHPL------------------------------------------ 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ P ++ V DI + + +VITGPNTGGKTI LKT+GL +MA+SGL I
Sbjct: 313 IDPRKV----------VANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFI 362
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++V ++ +FADIGDEQS+ Q+LSTFS H++ I + ++Q + SLVL+DE+GAGT
Sbjct: 363 PVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGT 422
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKPTY+
Sbjct: 423 DPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYR 481
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PGRS+A++IA+RLG+P +V AR L S ++N +I ++ + Q +
Sbjct: 482 LLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHL 541
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ + S LH+ L E A Q+ RK Q I DA A ++V + S ++
Sbjct: 542 KTQVADSEKLHRQLKS------EFNAYQQ-RKDQLIEDAKVQANTIVEQ-------SKTK 587
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
A +++ ++ S + ++ ++ + L + QQ P + V++
Sbjct: 588 ADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQ--------PKLKKNRVLR---- 635
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
R K + GD V V S+G++G +++ + K E VQ+G +K MK +D
Sbjct: 636 --RAKAQHDFHEGDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILK--MKISD 682
>gi|429204941|ref|ZP_19196222.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146803|gb|EKW99038.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 223/442 (50%), Gaps = 78/442 (17%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EP + V LN+ L++ +++ + + +L L+ + +E++ + I QL
Sbjct: 216 SASGQTVFVEPKAIVELNNRLKRQQSAEREEVKRILAELSALIAPYTEELQANAHIIGQL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D VNA+A Y+ + T P I + + +YL + +HPLL+
Sbjct: 276 DFVNAKARYAHAIKATEPII----------------------DTDNNVYLRQVWHPLLV- 312
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
Q+A ++ DI
Sbjct: 313 -----PQKAVRN----------------------------------------------DI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ + + ++ITGPNTGGKTI LKT+GL MM +SGL I + E +++ F +FADIGDE
Sbjct: 322 MLGKDYQAIIITGPNTGGKTITLKTLGLVQMMGQSGLFIPAYEESRIGIFTDIFADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ Q+LSTFS H+ I NI+ + SLVL DE+GAGT+P EG +L +++L+A +G+
Sbjct: 382 QSIEQNLSTFSSHMVNIVNILQHIDAHSLVLFDELGAGTDPQEGASLAIAILDAVGATGA 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ +ATTH+ ELK + NA MEFD L+PTY++L G+PGRS+A NI+ RLGL
Sbjct: 442 YV-VATTHYPELKAYGFERPGTINASMEFDVETLQPTYRLLLGIPGRSNAFNISRRLGLD 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
++ A++L S ++N +I ++ + Q E + L + LH +L + K+
Sbjct: 501 ETIIAAAQELTTQDSQDLNAMITDLVAKRHQAEEEAIALQKHLEEAEKLHHDLAQAYEKL 560
Query: 644 L---EHCASQRFRKVQKISDAA 662
+ H Q K I A
Sbjct: 561 VAERSHLTEQAKMKANDIVQVA 582
>gi|423650449|ref|ZP_17626019.1| MutS2 protein [Bacillus cereus VD169]
gi|401281608|gb|EJR87514.1| MutS2 protein [Bacillus cereus VD169]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FKEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|423335900|ref|ZP_17313651.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
gi|337729103|emb|CCC04226.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
Length = 791
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 219/411 (53%), Gaps = 50/411 (12%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E VS + HP V DI I + ++ITGPNTGGKTI LKT+G+ +M +SG
Sbjct: 298 ENHVSLRKARHPLIDPRRVVTNDIKIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSG 357
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L I + E + + FD+VFADIGDEQSL Q+LSTFSGH+ + I+ Q TS+S+VLLDE+G
Sbjct: 358 LFIPAEEGSTIGIFDNVFADIGDEQSLEQNLSTFSGHMDGVKAILEQITSRSIVLLDELG 417
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL M++L+ G+++ I TTH+ ELK Y NA MEFD+ LKP
Sbjct: 418 AGTDPKEGAALAMAILDNIGSKGTMVVI-TTHYPELKVYGYDRAKTINASMEFDQETLKP 476
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TYK+L G+PGRS+ + IA+RLG+ V+ AR S ++N +I ++ + + E
Sbjct: 477 TYKLLLGIPGRSNGLEIAQRLGINPQVIDEARTFVSDDSQDLNNMIGDLVEQRKKAREES 536
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
+ + + ++L + L QR + ++ ARS K+ Q+ +
Sbjct: 537 ERLAKLVAKNEKVQRDL----DEKLTRFNEQRDKLYEQ-------ARS---KANHQVSMA 582
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVG--KNQHVLTSNFQQTTVDKVEHPATASSSVV 737
+A ++H Q L + G K ++ + Q + + ++P +SV+
Sbjct: 583 KKKADRIIHHLRQ---------LEVQQGGNVKENELIDAQGQLNALHR-DNPRLQHNSVL 632
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+ KQ + + GD V V S+G+ G E++ + GN KW
Sbjct: 633 QRAKQKHDLHK------GDAVLVKSYGQYG----------ELLSKRGNHKW 667
>gi|110803296|ref|YP_699161.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens SM101]
gi|122956595|sp|Q0SRU6.1|MUTS2_CLOPS RecName: Full=MutS2 protein
gi|110683797|gb|ABG87167.1| MutS2 family protein [Clostridium perfringens SM101]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTMPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
+++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNIIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISDAA-AIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADTILKNMRDL 594
>gi|206977729|ref|ZP_03238620.1| MutS2 family protein [Bacillus cereus H3081.97]
gi|206744030|gb|EDZ55446.1| MutS2 family protein [Bacillus cereus H3081.97]
Length = 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V++ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIEQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|423615062|ref|ZP_17590896.1| MutS2 protein [Bacillus cereus VD115]
gi|401261918|gb|EJR68069.1| MutS2 protein [Bacillus cereus VD115]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNRERVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNEERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ V+S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|322516027|ref|ZP_08068964.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
gi|322125442|gb|EFX96788.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
Length = 791
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 218/404 (53%), Gaps = 48/404 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 316 LVNPVANDLHFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 375
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 376 EIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGASLAMAI 435
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 436 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 494
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHEARHFLMLSRN 631
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ + N
Sbjct: 495 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKDVEQ-----EN 548
Query: 632 LHKNLLRTRRKI---LEHCASQRFRKVQK-ISDAAAIARSLVHKSAQQLCPSASQARSLV 687
L N R +K+ H + K QK I D A L S S ++L
Sbjct: 549 LKFN--RAVKKLYNEFSHEYDKELEKAQKDIQDMVDTA----------LAESDSILKTL- 595
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
H ++ QL+P H K + + K+ S + V ++++ + K
Sbjct: 596 HDKS-QLKP------HEVIDAKGK-----------LKKLAPQVDLSKNKV--LRKAKKEK 635
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
T P VGD + V+++G++GT+ + QVG +K +K
Sbjct: 636 TTRAPRVGDDIIVTAYGQRGTLTS-QAKNGNWEAQVGLIKMTLK 678
>gi|168206066|ref|ZP_02632071.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
gi|170662410|gb|EDT15093.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTLPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|335996984|ref|ZP_08562901.1| DNA mismatch repair protein [Lactobacillus ruminis SPM0211]
gi|335352054|gb|EGM53545.1| DNA mismatch repair protein [Lactobacillus ruminis SPM0211]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 287/588 (48%), Gaps = 121/588 (20%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ SSSG IEP V LN+ L+Q + + + + +L L+E + +EIE
Sbjct: 207 AFGGIVHDQSSSGQTLFIEPKEIVELNNRLRQQQIAEKEEIKRILEELSELIAPYTEEIE 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + D +NA+A L D+K + +P+ S RE +YL
Sbjct: 267 NNAKILGKFDFINAKAK-------------LAHDLKAT---QPLIS------RENDVYLR 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+ +HPL L+
Sbjct: 305 QVWHPL----------------------------------------------------LD 312
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V D+ I + + +VITGPNTGGKTI LKT+GL MM +SGL I + E +++ FD
Sbjct: 313 SKKAVRNDVAIGKDYQAIVITGPNTGGKTITLKTLGLVSMMGQSGLFIPAFENSRIGVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ + +SLVL DE+GAGT+P EG AL +++
Sbjct: 373 DIFADIGDEQSIEQSLSTFSSHMTNTVEILKRIDERSLVLFDELGAGTDPQEGAALAIAI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+A GS + +ATTH+ ELK Y NA MEFD LKPTY +L G+PGRS+A
Sbjct: 433 LDAVGAKGSYV-VATTHYPELKAYGYERPQTINASMEFDAETLKPTYHLLIGIPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
+I++RLGL +V+ ARQL S ++NE+I ++ + + + E + +L S LH
Sbjct: 492 DISKRLGLDDAIVEAARQLTDQDSQDLNEMIADLVQKRHEAEEEKARFKKYLDESEKLHA 551
Query: 635 NL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
+L +R R ++E RK +I + A K ++++ S +
Sbjct: 552 DLEKGYGTYVRERDNMIETAK----RKANEIIENA-------QKKSEEII-------SEL 593
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
HK ++ S + S+ K ++ + ++ ++ +E P ++K K R K
Sbjct: 594 HK----MKQSGASSI------KENELIDA---RSRLNDLEQPI-----MLKKNKVLQRAK 635
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + + D V V ++G++G + K K E VQ+G +K + D+
Sbjct: 636 KQQEFHENDDVLVKTYGQRGVLTK-RLGKHEWEVQLGILKMKIDEDDL 682
>gi|300768029|ref|ZP_07077935.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181065|ref|YP_003925193.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|300494378|gb|EFK29540.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046556|gb|ADN99099.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 787
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 293/592 (49%), Gaps = 109/592 (18%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I A+ S F G++ S+SG IEP + + +ND L+Q + + + E+ +L L
Sbjct: 197 RYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEEL 256
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + DEI + D +NA+A Y+ DMK + EP S
Sbjct: 257 SNLIAPYQDEIINNAAILGHFDFINAKARYA-------------HDMKAT---EPAVSPK 300
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+ +YL +A HPL
Sbjct: 301 NE------VYLRQARHPL------------------------------------------ 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ P ++ V DI + + +VITGPNTGGKTI LKT+GL +MA+SGL I
Sbjct: 313 IDPRKV----------VANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFI 362
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++V ++ +FADIGDEQS+ Q+LSTFS H++ I + ++Q + SLVL+DE+GAGT
Sbjct: 363 PVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGT 422
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+A G+ + +ATTH+ ELK ++ NA MEFDE LKPTY+
Sbjct: 423 DPQEGAALAIAILDAIGAKGTQV-VATTHYPELKAYGFNRPDTINASMEFDEETLKPTYR 481
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PGRS+A++IA+RLG+P +V AR L S ++N +I ++ + Q +
Sbjct: 482 LLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHL 541
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ + S LH+ L E A Q+ RK Q I DA A ++V + S ++
Sbjct: 542 KTQVADSEKLHRQLKS------EFNAYQQ-RKDQLIEDAKVQANTIVEQ-------SKTK 587
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
A +++ ++ S + ++ ++ + L + QQ P + V++
Sbjct: 588 ADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQ--------PKLKKNRVLR---- 635
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
R K + GD V V S+G++G +++ + K E VQ+G +K MK +D
Sbjct: 636 --RAKAQHDFHEGDDVLVKSYGQRGVLMR-QMGKHEWEVQLGILK--MKISD 682
>gi|312863354|ref|ZP_07723592.1| MutS2 family protein [Streptococcus vestibularis F0396]
gi|311100890|gb|EFQ59095.1| MutS2 family protein [Streptococcus vestibularis F0396]
Length = 782
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 218/404 (53%), Gaps = 48/404 (11%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLHFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHEARHFLMLSRN 631
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ + N
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKDVEQ-----EN 539
Query: 632 LHKNLLRTRRKI---LEHCASQRFRKVQK-ISDAAAIARSLVHKSAQQLCPSASQARSLV 687
L N R +K+ H + K QK I D A L S S ++L
Sbjct: 540 LKFN--RAVKKLYNEFSHEYDKELEKAQKDIQDMVDTA----------LAESDSILKTL- 586
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
H ++ QL+P H K + + K+ S + V ++++ + K
Sbjct: 587 HDKS-QLKP------HEVIDAKGK-----------LKKLAPQVDLSKNKV--LRKAKKEK 626
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
T P VGD + V+++G++GT+ + QVG +K +K
Sbjct: 627 TTRAPRVGDDIIVTAYGQRGTLTS-QAKNGNWEAQVGLIKMTLK 669
>gi|229105178|ref|ZP_04235827.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
gi|228678104|gb|EEL32332.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNEERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ V+S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVREKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|168211671|ref|ZP_02637296.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
gi|170710370|gb|EDT22552.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTLPIV----------------------NEEGVIDLIDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVRIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|294506640|ref|YP_003570698.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
gi|294342968|emb|CBH23746.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
Length = 819
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 210/400 (52%), Gaps = 51/400 (12%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP + + LN+E+++ +++ E +L +T+ ++ + D IE+ L + Q
Sbjct: 218 SASGQTVYIEPAACLELNNEVRELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQF 277
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D++ A+A ++ G P + + E IY + +P+L
Sbjct: 278 DLLRAKARFANRLGAVVPKL--------------------NDEGHVEIY--EGRNPVL-- 313
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
Q +++L + RR GE++ L P E+ VP+D+
Sbjct: 314 ------QLHFEELGAGGATDRRAS---------GEEEA-LPPREV----------VPLDL 347
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ R LVITGPN GGKT+ +KTVGL +M GL + + ++ P FD + ADIGDE
Sbjct: 348 ELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQIVADIGDE 407
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ LSTFS H+ + +++S +LVL+DE G GT+P EG AL ++LE E+G+
Sbjct: 408 QSIEDDLSTFSSHVSNLRHMLSAVGESALVLIDEAGTGTDPDEGAALAQAVLERLTEAGA 467
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
TIATTHHG LKT + + EN MEFD+ L+PT++ GVPG S A IA R+GL
Sbjct: 468 -RTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAFEIARRMGLS 526
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
G ++ AR L G + +I ER + + +++AR
Sbjct: 527 GDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDAR 566
>gi|148543773|ref|YP_001271143.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|184153179|ref|YP_001841520.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227363247|ref|ZP_03847379.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|325682145|ref|ZP_08161663.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
gi|148530807|gb|ABQ82806.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|183224523|dbj|BAG25040.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227071703|gb|EEI09994.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|324978789|gb|EGC15738.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
Length = 791
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 219/411 (53%), Gaps = 50/411 (12%)
Query: 387 EMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSG 439
E VS + HP V DI I + ++ITGPNTGGKTI LKT+G+ +M +SG
Sbjct: 298 ENHVSLRKARHPLIDPQRVVTNDIKIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSG 357
Query: 440 LHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIG 499
L I + E + + FD+VFADIGDEQSL Q+LSTFSGH+ + I+ Q TS+SLVLLDE+G
Sbjct: 358 LFIPAEEGSTIGIFDNVFADIGDEQSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELG 417
Query: 500 AGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKP 559
AGT+P EG AL M++L+ G+++ I TTH+ ELK Y NA MEFD+ LKP
Sbjct: 418 AGTDPKEGAALAMAILDNIGSKGTMVVI-TTHYPELKVYGYDRAKTINASMEFDQETLKP 476
Query: 560 TYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHV 619
TYK+L G+PGRS+ + IA+RLG+ V+ AR S ++N +I ++ + + E
Sbjct: 477 TYKLLLGIPGRSNGLEIAQRLGISLQVIDEARTFVSDNSQDLNNMIGDLVEQRKKAREES 536
Query: 620 HEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPS 679
+ + + + ++L + L QR + ++ ARS K+ Q+ +
Sbjct: 537 EKLAKLVAKNEKVQRDL----DEKLTRFNEQRDKLYEQ-------ARS---KANHQVSMA 582
Query: 680 ASQARSLVHKRAQQLRPSASQSLHCTKVG--KNQHVLTSNFQQTTVDKVEHPATASSSVV 737
+A ++H Q L + G K ++ + Q + ++P +SV+
Sbjct: 583 KKKADRIIHHLRQ---------LEVQQGGNVKENELIDAQGQLNALHH-DNPRLQHNSVL 632
Query: 738 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+ KQ + + GD V V S+G+ G E++ + GN KW
Sbjct: 633 QRAKQKHDLHK------GDAVLVKSYGQYG----------ELLSKRGNHKW 667
>gi|116494335|ref|YP_806069.1| MutS family ATPase [Lactobacillus casei ATCC 334]
gi|122264237|sp|Q03AZ5.1|MUTS2_LACC3 RecName: Full=MutS2 protein
gi|116104485|gb|ABJ69627.1| MutS family ATPase [Lactobacillus casei ATCC 334]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 225/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LPG++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A +LV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NTLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|229099010|ref|ZP_04229945.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|229118041|ref|ZP_04247401.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|407707068|ref|YP_006830653.1| oxidoreductase, Gfo/Idh/MocA [Bacillus thuringiensis MC28]
gi|423377604|ref|ZP_17354888.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|423440711|ref|ZP_17417617.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|423463776|ref|ZP_17440544.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|423533128|ref|ZP_17509546.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|423541608|ref|ZP_17517999.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|423547839|ref|ZP_17524197.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|423622372|ref|ZP_17598150.1| MutS2 protein [Bacillus cereus VD148]
gi|228665490|gb|EEL20972.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|228684508|gb|EEL38451.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|401171141|gb|EJQ78374.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|401178276|gb|EJQ85456.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|401261512|gb|EJR67672.1| MutS2 protein [Bacillus cereus VD148]
gi|401638453|gb|EJS56203.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|402418842|gb|EJV51131.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|402421320|gb|EJV53580.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|402464361|gb|EJV96057.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|407384753|gb|AFU15254.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis MC28]
Length = 786
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNEERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ V+S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|402570749|ref|YP_006620092.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
gi|402251946|gb|AFQ42221.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
Length = 787
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 214/414 (51%), Gaps = 39/414 (9%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
Q+ ++ HP VP+ + + + LVITGPNTGGKT+ LK VGL M +SGL I
Sbjct: 300 QIKLVQARHPLISGRVVPLSLELGIEFDTLVITGPNTGGKTVALKVVGLMAAMNQSGLQI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ +++ F +FADIGDEQS+ QSLSTFSGH+K I II +S +SLVLLDE+GAGT
Sbjct: 360 PAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSDGRSLVLLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL M +L E G T++TTH+G LKT Y +NA +EFD L+PTY+
Sbjct: 420 DPTEGAALAMGILAELHERGC-RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGL V++ A N + E E +E++ E
Sbjct: 479 LLIGIPGKSNAFTIAGRLGLSEEVLEKA-----------NTFVTEREMQVADLIENLGET 527
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS- 681
+ + K T R+ +E K ++ + I +L A ++ A
Sbjct: 528 HREI----EIEKQKAETGRQAVEKQTKALEEKSIRLDEELEILVALAKDEASEIIREAKR 583
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +++ + LR Q K + +++ Q + +K
Sbjct: 584 EAEAIIDELKAALRKENKQQQDIEKARQGFRKISAKLDQG----------------RQVK 627
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+S + +G V+++ +KG VIK+ S +E+++Q G MK ++ +++
Sbjct: 628 RSGSELSADQIMLGQTVYMTKLRQKGQVIKLPNSNDEVLIQAGIMKVMVPLSEL 681
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
SF G++ S+SG IEP+ V L +EL++ + + +L L+ +++ DEI
Sbjct: 207 SFPGIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEGRGDEIA 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
+ + QLD+V A+A S+S +P + Q +K P+ S
Sbjct: 267 DLHEALAQLDLVIAKAHLSVSMNAGAPELVAGQQIKLVQARHPLIS 312
>gi|423411664|ref|ZP_17388784.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|423432549|ref|ZP_17409553.1| MutS2 protein [Bacillus cereus BAG4O-1]
gi|401104989|gb|EJQ12957.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|401115682|gb|EJQ23529.1| MutS2 protein [Bacillus cereus BAG4O-1]
Length = 786
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEVERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|254724521|ref|ZP_05186304.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A1055]
Length = 786
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSNRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|18310863|ref|NP_562797.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens str. 13]
gi|38604940|sp|Q8XJ80.1|MUTS2_CLOPE RecName: Full=MutS2 protein
gi|18145545|dbj|BAB81587.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 786
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSVLVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTLPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVRIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISDAA-AIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|339623939|ref|ZP_08659728.1| MutS family ATPase [Fructobacillus fructosus KCTC 3544]
Length = 799
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 280/575 (48%), Gaps = 109/575 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVD-LDEIEKMLNGIIQ 282
S SG IEP S V + +EL + R + AEED +LA M D L+++ + + +
Sbjct: 218 SQSGQTYYIEPQSVVEMANELSETRV-LALAEEDRVLAELSVMLADHLEDLRQNAMVLGK 276
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LD VNA+A + + +P + S ++E + L +A+HPL+
Sbjct: 277 LDFVNAKARLAKAQNAMAPEL--------------------SEKKE--VVLNQAWHPLI- 313
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
GEK V D
Sbjct: 314 ----------------------------------GEK-----------------KAVKND 322
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
I + K L+ITGPNTGGKTI +KT+GL ++A+SGL I + V FD +FADIGD
Sbjct: 323 IALGEKYETLIITGPNTGGKTITIKTLGLLQLLAQSGLFITVGRPSVVAVFDEIFADIGD 382
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS+ Q+LSTFS H++ I I++++ SL++ DE+GAGT+P EG AL M++L+ + G
Sbjct: 383 EQSIEQNLSTFSSHMENIKGILTRTDENSLLIFDELGAGTDPAEGAALAMAILDRAKDLG 442
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+ TIATTH+ ELK ENA M FD LKPTY++L GVPG+S+A+ IA RLG
Sbjct: 443 A-QTIATTHYPELKLYGNERSGTENASMVFDVKTLKPTYQLLIGVPGQSNALAIASRLGF 501
Query: 583 PGIVVQNARQLYGAASAEINEVIIEM-ERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
++ +A+ + + ++NE+I ++ ++ + E AR KNL+ T+
Sbjct: 502 DQQLLADAKTMVNPENQKLNEMIKDLVDQRQAAKTERERLARD--------QKNLVATQT 553
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQ 700
++ E + + + DA A LV K+ + +A L+ + R+++L
Sbjct: 554 ELEEKTLKLEKEQAKVMLDAKKRANELVSKTKR-------EAEQLIKEIRSERLAGGQKN 606
Query: 701 SLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 760
L + K + + + QQ+ DK+E K R KR + GD V V
Sbjct: 607 KLSEQDLQKQKQAIAA-LQQS--DKLEKN-----------KVLQRAKRVKELKPGDDVMV 652
Query: 761 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
SS+ ++GT++K + + VQ+G +K ++ D+
Sbjct: 653 SSYNQQGTLVKKHKNG-QWEVQMGILKMLVDEDDL 686
>gi|49478686|ref|YP_038600.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|81696639|sp|Q6HCX6.1|MUTS2_BACHK RecName: Full=MutS2 protein
gi|49330242|gb|AAT60888.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 786
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N++ + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNSQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|450145168|ref|ZP_21874440.1| putative DNA mismatch repair protein [Streptococcus mutans 1ID3]
gi|449149621|gb|EMB53414.1| putative DNA mismatch repair protein [Streptococcus mutans 1ID3]
Length = 776
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 22/297 (7%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L++ + D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNSIANDLHFEHDTTTILITGPNTGGKTIMLKTLGIIQLMAQSGLPILADEGSKVAVFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 635 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 678
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
>gi|307244041|ref|ZP_07526160.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492565|gb|EFM64599.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
Length = 807
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 219/404 (54%), Gaps = 47/404 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI + L+ITGPNTGGKT+ +KT+GL +M + GLH+ ++ + FD +FA
Sbjct: 333 VANDIILGGDYSTLLITGPNTGGKTVTIKTLGLFALMTQCGLHLSANYGTSMCIFDQIFA 392
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGD+QS+ Q+LSTFS H+ +I +I+ + T QSLV+ DE+GAGT+P EG AL +++LE
Sbjct: 393 DIGDDQSIEQNLSTFSSHMTRIVDIVERVTDQSLVIFDELGAGTDPEEGAALAIAILENI 452
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
SG+ IATTH+ ELK + ENA +EFD L PTY++L GVPG+S+A I+
Sbjct: 453 RSSGA-SCIATTHYSELKKYALAKKDVENAAVEFDMGTLSPTYRLLIGVPGKSNAFEISR 511
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQFLEHVHEARHFLMLSRNLH--- 633
+LGL ++ A+ EI EV+ +E R KTQ E + A + ++
Sbjct: 512 KLGLGEHIIDQAKNFLTNEDIEIEEVLQNVEKSRLKTQ--EELERAERYRQEIEDIKLDY 569
Query: 634 ----KNLLRTRRKILEHCASQRFRKV-QKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
+ L +++ K+LE+ SQ F V Q D A+ + + + +L S + R
Sbjct: 570 QAKLEKLDKSKAKVLENARSQAFSIVRQAKEDTDAMIKEI--RKTDRLKDSREKDR---- 623
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
R +++R QS+ GK F Q +V+ + P AS + +
Sbjct: 624 -RLEEIRKKIGQSM-----GK--------F-QPSVESMVVPKYASKEI-----------K 657
Query: 749 TELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 792
T P G V++ + + GTVI + K+E +VQVG MK + +
Sbjct: 658 TLKP--GTDVNIITLRQDGTVISADDKKKEAIVQVGIMKMSLPY 699
>gi|228917190|ref|ZP_04080747.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228935862|ref|ZP_04098672.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823630|gb|EEM69452.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228842391|gb|EEM87482.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 786
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|452990484|emb|CCQ98332.1| MutS2 protein [Clostridium ultunense Esp]
Length = 829
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 217/403 (53%), Gaps = 43/403 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +LVITGPNTGGKT+ LKT+GL +MA++GL I + E ++V F VFA
Sbjct: 360 VPIDVEVGDSFTMLVITGPNTGGKTVTLKTIGLMTLMAQAGLQIPAGEGSEVAVFSQVFA 419
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I II + T SL+LLDE+GAGT+P EG AL +++LE
Sbjct: 420 DIGDEQSIEQSLSTFSSHMTHIVKIIEEMTPDSLILLDELGAGTDPTEGAALAIAILEEL 479
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + +ATTH+ ELK Y++ NA +EFD L PTY++L G+PGRS+A IAE
Sbjct: 480 YRRDARV-VATTHYSELKVYAYNHPGVMNASVEFDVETLSPTYRLLLGIPGRSNAFLIAE 538
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ AR +++E E+E+ T E EA + + + ++R
Sbjct: 539 RLGLPKEIIDKAR-------GQVDEESRELEQMITNLAESRKEAEMKREEAERIQEEMVR 591
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R + E + + + +AA A +V K+ ++ + R L + +++
Sbjct: 592 LRNSLQEEKERLERERDRLLREAAREAEEVVKKARREAEEVIQELRRLGEEEGARIK--- 648
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN----- 753
+H L +E ++ I ++ R +R ++P+
Sbjct: 649 ------------EHRL-----------IEAKKRLDEAI--PILETGRRERGDVPSSPHGL 683
Query: 754 -VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V+V S KG V++ ++E +VQVG +K + D+
Sbjct: 684 KAGDEVYVHSLKLKGIVLEA-LGEDEYLVQVGILKTKLNGRDL 725
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 62/300 (20%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGRE--ATLTQLWSINQTYQDSLRLLDETNAAIEMQKHG 110
+++VLE+DK+ +A +SL RE LT + TY+ E A E G
Sbjct: 48 TVKVLEFDKVIEQAMRYASSSLARERMERLTPFF----TYE-------EVEEAQEATAEG 96
Query: 111 SCSLDLTGV----DLSLVKSAIREVRRASPLRPNEALAVVALL----------------- 149
L G + ++ +IR R L P E L + L
Sbjct: 97 VTVYRLRGEVPLGGIHDIRPSIRRARMGGVLSPQEFLDLADTLAAGRRLKHFLLELADKE 156
Query: 150 ------QFSE------TLQLSLRAAIKEDADLYIRFMPLTQMLY-----------QLMDM 186
+++E L+ + I E ++ PL + + + +D
Sbjct: 157 SLPILKEYAERIEGLKNLETKIHGTIDEYGEVLDGASPLLRKIRAEIKGLESGIKERLDR 216
Query: 187 LIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLN 241
++++ + + + E V+ +GR I + + +F GL+ S+SG IEP + V LN
Sbjct: 217 MVKDPSYQKMIQEQIVTLRNGRYVIPVKQEYRTAFGGLVHDQSASGATLFIEPEAVVRLN 276
Query: 242 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+EL+ A+ K E +L LT + D + + + +LD + +A Y+LS + P
Sbjct: 277 NELRDAKLKEEKEIERILRELTHTTAEEADALSVNVESLAELDFIFTKAKYALSIKASRP 336
>gi|395240988|ref|ZP_10418010.1| MutS2 protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475496|emb|CCI87987.1| MutS2 protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 787
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 219/404 (54%), Gaps = 37/404 (9%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
++L VP DI++ + ++ITGPNTGGKTI LKT GL +MA+SGL I + E ++V
Sbjct: 310 IDLTRVVPNDIYLGAEFDTMLITGPNTGGKTITLKTAGLLQLMAQSGLFIPAEEGSQVGV 369
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F +FADIGDEQS+ QSLSTFS H+ I +I+ S +LVL+DEIGAGT+P EG +L +
Sbjct: 370 FKEIFADIGDEQSIEQSLSTFSSHINDIVDIMKNSHQDTLVLIDEIGAGTDPEEGASLAI 429
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ + + + + TTH+ ELK Y+ + NA MEFD L PTY++ G+PG S+
Sbjct: 430 SILDFLRQRKAKIMV-TTHYPELKLYGYNRERTTNASMEFDIKTLSPTYRLQIGIPGHSN 488
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A IA RLG+ VV+NA L ++IN++I + + E + + L SRNL
Sbjct: 489 AFAIARRLGMREDVVKNAEGLMKDVDSDINQMIATLNDQTKKATEARIQLQTSLARSRNL 548
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
K K+ DA I V K + A++ + K+A+
Sbjct: 549 EK----------------------KLQDALDIYNQRVQKQLEFAQERANEVVAKKRKKAE 586
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPAT--ASSSVVKDIKQSPRVKRTE 750
++ + + K ++ + + +K+E AT A++ V++ R KR
Sbjct: 587 EIIKELEEQRKNGALIKQNKLIDAKGE---FNKLEQQATNLANNRVLQ------REKRRH 637
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
NVGD V V S+G+ G + K + + + VQ+G +K +K TD
Sbjct: 638 HVNVGDQVKVLSYGQTGVITK-KLTDHDYEVQIGIIK--VKVTD 678
>gi|126652668|ref|ZP_01724829.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
gi|126590517|gb|EAZ84635.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
Length = 788
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 225/403 (55%), Gaps = 46/403 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + +VITGPNTGGKT+ LKTVGL +MA++GL + + + +++ F +FA
Sbjct: 320 VPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSQLAVFKQLFA 379
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 380 DIGDEQSIEQSLSTFSSHMVNIVDILQKFDDESLVLFDELGAGTDPQEGAALAISILDEV 439
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA +EFD L PTY++L GVPGRS+A I+
Sbjct: 440 HGRGARV-MATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSNAFEISS 498
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL-- 636
RLGLP +++ A+ G E+ +I +E + Q + + L+ S +L K L
Sbjct: 499 RLGLPETIIERAKGFTGTDRHEVESMIASLEETRRQSEDDAERSHALLLESESLRKELQD 558
Query: 637 ----LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
R++ L+ A ++ RK+ + +A A ++ + +
Sbjct: 559 KLQAYDERKEALDKKAKEKARKI--VEEAKHEAEGIIAE-------------------LR 597
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK-RTEL 751
++R +A Q + +H L + ++E ++ V +K++ +VK R +
Sbjct: 598 EMRKNADQVV-------KEHELIEARK-----RLEEATPLDNNKV--LKKAAQVKARAQN 643
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
VGD V V S+G++GT+++ + S E VVQ+G +K MK +D
Sbjct: 644 LVVGDEVKVLSYGQRGTLLE-KVSNTEWVVQMGILK--MKISD 683
>gi|206969500|ref|ZP_03230454.1| MutS2 family protein [Bacillus cereus AH1134]
gi|229072054|ref|ZP_04205263.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|229081805|ref|ZP_04214297.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|229180871|ref|ZP_04308206.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|229192752|ref|ZP_04319710.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|365158667|ref|ZP_09354859.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|206735188|gb|EDZ52356.1| MutS2 family protein [Bacillus cereus AH1134]
gi|228590591|gb|EEK48452.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|228602428|gb|EEK59914.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|228701393|gb|EEL53887.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|228710988|gb|EEL62954.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|363626540|gb|EHL77523.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEVERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|423449119|ref|ZP_17425998.1| MutS2 protein [Bacillus cereus BAG5O-1]
gi|401128568|gb|EJQ36257.1| MutS2 protein [Bacillus cereus BAG5O-1]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 220/398 (55%), Gaps = 41/398 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNEERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
GD V V +FG+KG +++ + S E VQ+G +K +K
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVK 679
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ V+S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|301056059|ref|YP_003794270.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
anthracis str. CI]
gi|423549710|ref|ZP_17526037.1| MutS2 protein [Bacillus cereus ISP3191]
gi|300378228|gb|ADK07132.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
anthracis str. CI]
gi|401190506|gb|EJQ97548.1| MutS2 protein [Bacillus cereus ISP3191]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEIVANLDFIFAKAFYAKRIKATKP 294
>gi|228954821|ref|ZP_04116841.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229112016|ref|ZP_04241559.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|423426676|ref|ZP_17403707.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|423437985|ref|ZP_17414966.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|423502774|ref|ZP_17479366.1| MutS2 protein [Bacillus cereus HD73]
gi|449091504|ref|YP_007423945.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228671339|gb|EEL26640.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|228804810|gb|EEM51409.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110242|gb|EJQ18151.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|401119598|gb|EJQ27409.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|402460013|gb|EJV91741.1| MutS2 protein [Bacillus cereus HD73]
gi|449025261|gb|AGE80424.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|118479701|ref|YP_896852.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis str. Al Hakam]
gi|196044939|ref|ZP_03112173.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225866525|ref|YP_002751903.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|229186805|ref|ZP_04313960.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|229198701|ref|ZP_04325400.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|376268476|ref|YP_005121188.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|423573771|ref|ZP_17549890.1| MutS2 protein [Bacillus cereus MSX-D12]
gi|189030425|sp|A0RJF2.1|MUTS2_BACAH RecName: Full=MutS2 protein
gi|254766189|sp|C1ETZ0.1|MUTS2_BACC3 RecName: Full=MutS2 protein
gi|118418926|gb|ABK87345.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
str. Al Hakam]
gi|196024427|gb|EDX63100.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225787320|gb|ACO27537.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|228584777|gb|EEK42896.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|228596542|gb|EEK54207.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|364514276|gb|AEW57675.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|401213523|gb|EJR20263.1| MutS2 protein [Bacillus cereus MSX-D12]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|229158157|ref|ZP_04286225.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
gi|228625319|gb|EEK82078.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|196034369|ref|ZP_03101778.1| MutS2 family protein [Bacillus cereus W]
gi|218905777|ref|YP_002453611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH820]
gi|228929599|ref|ZP_04092617.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|226723044|sp|B7JR57.1|MUTS2_BACC0 RecName: Full=MutS2 protein
gi|195992911|gb|EDX56870.1| MutS2 family protein [Bacillus cereus W]
gi|218535887|gb|ACK88285.1| MutS2 family protein [Bacillus cereus AH820]
gi|228829986|gb|EEM75605.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTSPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|52140954|ref|YP_085875.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus E33L]
gi|196042123|ref|ZP_03109407.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228948276|ref|ZP_04110559.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124117|ref|ZP_04253309.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|81685978|sp|Q633P2.1|MUTS2_BACCZ RecName: Full=MutS2 protein
gi|51974423|gb|AAU15973.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
gi|196027059|gb|EDX65682.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228659419|gb|EEL15067.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|228811263|gb|EEM57601.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|420210593|ref|ZP_14716016.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
gi|394276044|gb|EJE20400.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
Length = 782
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 216/387 (55%), Gaps = 40/387 (10%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH
Sbjct: 392 TFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E + + E + ++ H L S++
Sbjct: 511 TMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQ 558
Query: 652 FRKVQKISDAAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVG 708
+++ Q +SL+ ++ A Q SA++ + K + LR +
Sbjct: 559 YQQYQNYE------KSLMEEAKEKANQRVKSATKEADEILKELRNLRDYKGAEV------ 606
Query: 709 KNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGT 768
+H L +Q D+ E K IKQ + K+ + + GD V V S+G+KG
Sbjct: 607 -KEHELIDKKKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGE 655
Query: 769 VIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V+++ EE VVQ+G +K + D+
Sbjct: 656 VLEL-VGNEEAVVQMGIIKMKLPIEDL 681
>gi|384176446|ref|YP_005557831.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595670|gb|AEP91857.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 785
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEYTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T P + D I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKATKP---IMNDT-------------------GFIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL P E V+
Sbjct: 306 KARHPLL-------------------------------------------PPEQVVAN-- 320
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 321 -------DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAMKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K +++ KR P
Sbjct: 595 RSI-----------KEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEKTKAQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|421871064|ref|ZP_16302686.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
gi|372459691|emb|CCF12235.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
Length = 785
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 215/397 (54%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + +V+TGPNTGGKT+ +KT+GL +M +GLHI + E ++ F S+FA
Sbjct: 317 VPLDVELGKGYTGIVVTGPNTGGKTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS HL I I+ Q +SLVL DE+GAGT+P EG AL MS+L+
Sbjct: 377 DIGDEQSIEQSLSTFSSHLTNIIRILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHV 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ L +ATTH+ ELK Y NA +EFD L+PTY++L GVPGRS+A IA
Sbjct: 437 LAKGARL-VATTHYSELKAYAYDTPEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIAS 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ AR+ ++ ++I +E K + +A + R + L +
Sbjct: 496 RLGLNEQIIDKARRSVSKEENQVEKMIASLESNKKTAEKEREDAENI----RKQAEELRQ 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ A + R ++K + A +A L + A+ + R L R + +
Sbjct: 552 QLEEERRQFAEAKNRLLEKAEEEARVAVQLASEEAEVII------RELRQMRKEGVDFKE 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ + K L + + +KV+ PA A V+ T++ +GD V
Sbjct: 606 HRLIDAKK------RLGNAVLELEKEKVKKPAKA-------------VRATQI-KIGDEV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V SFG+KGTV+ + S E +VQ+G +K +K D+
Sbjct: 646 MVDSFGQKGTVLD-KVSSTEYLVQLGIIKMKVKKDDM 681
>gi|422346549|ref|ZP_16427463.1| MutS2 protein [Clostridium perfringens WAL-14572]
gi|373226094|gb|EHP48421.1| MutS2 protein [Clostridium perfringens WAL-14572]
Length = 786
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 234/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GGT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLGGTLPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S +L DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFILFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|423640379|ref|ZP_17615997.1| MutS2 protein [Bacillus cereus VD166]
gi|401281295|gb|EJR87208.1| MutS2 protein [Bacillus cereus VD166]
Length = 786
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAETLRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|430749370|ref|YP_007212278.1| MutS2 family protein [Thermobacillus composti KWC4]
gi|430733335|gb|AGA57280.1| MutS2 family protein [Thermobacillus composti KWC4]
Length = 784
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 214/400 (53%), Gaps = 39/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + ++ITGPNTGGKT+ LKT+GL +MA SGL + + + +++ FD+++A
Sbjct: 317 VPLDVELGNSYTAIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVPADDGSQLCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFSGH+ I ++ + T +SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQNLSTFSGHMTNIIRMLREMTPKSLVLLDELGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRLGCRI-VATTHYSELKAYAYNRKGIINASMEFDVQTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP +++ AR + ++I +E E R R ++L
Sbjct: 496 RLGLPRSIIERARGEVSEDDRRVEDMIASLE-----------EDRQSAEAERQTAESLRA 544
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ E A++ RK ++ D ++ K+ ++ + ++AR LR A
Sbjct: 545 EMERLKERHAAE-LRKFEQQRD------RMLAKAQEEAREAVAKARREAEAIIADLRRMA 597
Query: 699 SQSLHCTKVGKNQHVLTS---NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ K +H L + D P +A + K ++ P G
Sbjct: 598 LEEAASVK----EHKLIEARRRLDEAIPDLTPKP-SAQGAARKPVRVEP----------G 642
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V S +KG V+ E + E +VQ+G +K + +D+
Sbjct: 643 DEVTVISLNQKGVVL--ETGETEALVQIGILKMKVALSDL 680
>gi|417986118|ref|ZP_12626693.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
gi|410526874|gb|EKQ01752.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
Length = 786
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LPG +V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPGAIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|389573810|ref|ZP_10163881.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. M 2-6]
gi|388426380|gb|EIL84194.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. M 2-6]
Length = 786
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 216/710 (30%), Positives = 319/710 (44%), Gaps = 152/710 (21%)
Query: 89 TYQDSLRLLDETNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVAL 148
TY +SL LL + IE SC D G L A+R +R + LR
Sbjct: 122 TYAESLILLPDVRKEIE-----SCIGD-NGEVLDHATPALRTIR--TQLR---------- 163
Query: 149 LQFSETLQLSLRAAIKEDADLYIRFMPLTQMLYQLMDMLIRNENNESLFLEVSSIHGRLC 208
SL + +++ + IR ++ML + + IRN+ R
Sbjct: 164 ---------SLESKVRDKLESMIRSQSASKMLSDTI-VTIRND--------------RFV 199
Query: 209 IRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 265
I + S G ++ SSSG IEP V LN+ LQQ R + E +L LT
Sbjct: 200 IPVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDLNNTLQQTRLKEKQEIEKILQMLTAS 259
Query: 266 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSS 325
+ +DE+ +N + LD + A+A Y+ + T P +
Sbjct: 260 VSEHIDELLHNVNELQTLDFIFAKAKYAKAEKATKPTV---------------------- 297
Query: 326 EREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSP 385
+ IYL +A HPLL + Q D+E
Sbjct: 298 NNQGEIYLKRARHPLL-----PRDQVVANDIE---------------------------- 324
Query: 386 SEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSS 445
+ + +VITGPNTGGKT+ LKT+GL +M ++GLHI
Sbjct: 325 -------------------LGKDFSTIVITGPNTGGKTVTLKTLGLLTLMTQAGLHIPVE 365
Query: 446 EYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPL 505
E ++V FD VFADIGDEQS+ QSLSTFS H+ I +I+ TS SLVL DE+GAGT+P
Sbjct: 366 EGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKLLTSNSLVLFDELGAGTDPA 425
Query: 506 EGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILW 565
EG AL MS+L+ ++ + + IATTH+ ELK Y+ + NA +EFD L PTY++L
Sbjct: 426 EGAALAMSILDEVHQTNARV-IATTHYPELKAYGYNREGVTNASVEFDIETLSPTYRLLI 484
Query: 566 GVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHF 625
GVPGRS+A I++RLGLP ++ A+ A E++++I +E K Q E +HE +
Sbjct: 485 GVPGRSNAFEISKRLGLPHHLIDRAKADMHAEHNEVDQMIASLEDSKKQAEEELHETEVY 544
Query: 626 LMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS 685
+ LHK L +++ILE + L+ ++ Q+ QA+
Sbjct: 545 RKEAEKLHKEL---QKQILEWNEQK---------------DKLLEEAEQKAAEKIEQAKK 586
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR 745
+ Q+LR S+ +H L +D + A + K P
Sbjct: 587 EAEEIIQELR-----SIKSEHRSFKEHEL--------IDARKRLEEAVPEFDRKKKPEPV 633
Query: 746 VKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K GD V V +FG+KGT+I+ + +E VQ+G +K +K D+
Sbjct: 634 KKAARQLKPGDEVKVLTFGQKGTLIE-QTGNKEWSVQMGILKMKVKEKDM 682
>gi|323485118|ref|ZP_08090470.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
gi|323401548|gb|EGA93894.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
Length = 800
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 221/412 (53%), Gaps = 60/412 (14%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI+I++ + +L++TGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F+ VFA
Sbjct: 315 VPINIYLGDQFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFEEVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ Q+ S SL L DE+GAGT+P EG AL +++L +F
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNIVSILEQADSNSLCLFDELGAGTDPTEGAALAIAVL-SF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S T+ATTH+ ELK + ENAC EF L+PTY++L G+PG+S+A I++
Sbjct: 434 LHNMSCRTMATTHYSELKVYALTTPGVENACCEFSLETLRPTYRLLIGIPGKSNAFAISK 493
Query: 579 RLGLPGIVVQNARQLYGA---------ASAEINEVIIEMERFK-TQFLEHVHEARHFLML 628
+LGLP ++++A++ A E N V IE ER + + E V +L
Sbjct: 494 KLGLPDYIIEDAKKHIEQEDESFEDLLADLEDNRVTIEKERAEIASYKEQVA------IL 547
Query: 629 SRNLHKNLLR---TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS 685
R L + R + K+LE + R +Q D A +++ A++ S
Sbjct: 548 KRRLEQKEERFSEQKDKMLEKAREEAQRILQDAKDTADQTIRSINRLAKE---------S 598
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK--VEHPATASSSVVKDIKQS 743
V+K + R L + VDK PA +V S
Sbjct: 599 GVNKELEAERSKLRNKL------------------SDVDKKLAVKPAVPKKAV------S 634
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
P+ R +GD V V S KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 635 PKSLR-----LGDTVRVLSMNLKGTVSSLPNAKGDLYVQMGILRSLVNIKDL 681
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 50/294 (17%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET-NAAIEMQKHG 110
++L+ LE++K+ + +A T +G+ TL + + + ++ R ET +AA ++ G
Sbjct: 4 KALKTLEYNKIIAQLEEYASTQIGK--TLCRELVPSCSLEEIRRNQTETTDAATRVRMKG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLR---AAIKEDA 167
S L GV V+ +++ + S L E LAV +LL + + R + + +D+
Sbjct: 62 S--LSFGGV--KDVRGSLKRLEIGSSLNIIELLAVSSLLTVTARAKAYGRREESELPDDS 117
Query: 168 --DLYIRFMPLTQMLYQLMDMLIRNE--------------------------------NN 193
+++ PLT + ++ +I + N+
Sbjct: 118 LDEMFRTLEPLTPVNTEIKRCIISEDDVSDDASPGLSKVRKSMKIIAGRVHTQLNSVLNS 177
Query: 194 ESLFLEVSSI---HGRLCIRTGAD-QLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQA 247
+L+ + I GR C+ ++ + G++ S GS I EP++ V LN+EL++
Sbjct: 178 SRAYLQEAVITMRDGRYCLPVKSEYKNQVPGMVHDQSSTGSTIFIEPMAVVKLNNELREL 237
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ E VL AL+ ++ D I L + +LD + A+A S F T P
Sbjct: 238 EIQEKREIEFVLTALSGELVPYTDTIALNLELLAKLDFIFAKAALSRHFNCTEP 291
>gi|386583346|ref|YP_006079749.1| DNA mismatch repair protein [Streptococcus suis D9]
gi|353735492|gb|AER16501.1| DNA mismatch repair protein [Streptococcus suis D9]
Length = 777
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I++++ SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVQILAEADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QFWTDTDSDVNRII---EKLESQTVE 524
>gi|225376458|ref|ZP_03753679.1| hypothetical protein ROSEINA2194_02100 [Roseburia inulinivorans DSM
16841]
gi|225211834|gb|EEG94188.1| hypothetical protein ROSEINA2194_02100 [Roseburia inulinivorans DSM
16841]
Length = 523
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 216/407 (53%), Gaps = 47/407 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + R ++L++TGPNTGGKT+ LKTVGL +M +SGLHI +SE +++ F+ VFA
Sbjct: 46 VPIDVMLGRDFKLLIVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPASERSELGIFEEVFA 105
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ + +SLVL DE+ AGT+P EG AL +S+L
Sbjct: 106 DIGDEQSIEQSLSTFSSHMTNIIRILKKVNDRSLVLFDELCAGTDPTEGAALAISILSRL 165
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ T+ATTH+ ELK S ENAC EF+ L PTY++L G+PG+S+A I+E
Sbjct: 166 HLYGAR-TMATTHYSELKVFALSTPDVENACCEFNVETLSPTYRLLIGIPGKSNAFAISE 224
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGL ++++A+ +++ ++E+ + + E + ++L + L +
Sbjct: 225 KLGLSKDLIEDAKTRISENDENFEDLLADLEKSRVTIEKEQAEINRYKQEIQSLKERLEQ 284
Query: 639 -------TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+R KIL + FR +++ D A +K + P S + K
Sbjct: 285 KQEKLDASRDKILRDANEEAFRILKEAKDVADETIRNFNKYGKANAP-----MSEMEKER 339
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS--PRVKRT 749
+LR DK+ AS + D K++ P K
Sbjct: 340 TRLR----------------------------DKM----NASQKKLADQKKNAVPNHKVP 367
Query: 750 ELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+ +GD V V S KGTV + +K ++ VQ+G ++ ++ D++
Sbjct: 368 KKLQIGDTVKVISMNLKGTVHTLPNAKGDLYVQMGILRSLVNINDLI 414
>gi|365903650|ref|ZP_09441473.1| MutS family ATPase [Lactobacillus malefermentans KCTC 3548]
Length = 785
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 288/611 (47%), Gaps = 129/611 (21%)
Query: 193 NESLFLE---VSSIHGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQ 246
NES +L V+ R I A+ + F G++ S G IEP + V N++L+Q
Sbjct: 179 NESKYLSEGIVTIRDDRFVIPVKAEYKQHFGGIVHDQSSTGQTLFIEPGAVVEYNNQLRQ 238
Query: 247 ARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLP 306
+ + + ++ +L L+E ++ EIE + + LD +NA+A Y+
Sbjct: 239 HQLAEKQEQQLILAELSELLKPYQTEIENNAHILGHLDFINAKARYA------------- 285
Query: 307 QDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRR 366
K+ EP+ S + + L A HPL+
Sbjct: 286 ---KQQKATEPIISS------QNVVKLRAARHPLI------------------------- 311
Query: 367 KLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICL 426
P ++ + LEL D + + +++TGPNTGGKTI L
Sbjct: 312 -----------------DPKKVVANDLELG-----DTY-----KAIIVTGPNTGGKTITL 344
Query: 427 KTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQ 486
KT+GL +M +SGL I ++E +++ FD +FADIGDEQS+ Q+LSTFS H+ I +I++
Sbjct: 345 KTLGLVQLMGQSGLFIPANENSEIAIFDDIFADIGDEQSIEQNLSTFSSHMDNIVSILAD 404
Query: 487 STSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFE 546
+ +SL+LLDE+GAGT+P EG +L M++L+ GS + +ATTH+ ELK Y+
Sbjct: 405 ADEKSLILLDEVGAGTDPQEGASLAMAILDDIGSIGSAV-VATTHYPELKAFGYNRSDTI 463
Query: 547 NACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVII 606
NA MEFD LKPTY +L G+PGRS+A IA RLG+ ++ AR+L + +IN +I
Sbjct: 464 NASMEFDTKTLKPTYHLLIGIPGRSNAFEIAARLGIKESIIAEARELTDQDNQDINNMIA 523
Query: 607 EMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIAR 666
++ K + + + L + LH L + + Q+ R ++ D+A
Sbjct: 524 DLTAQKKAADDAAAQLKVELAEASQLHDEL----KVKYDKYEKQKDRLIEDAKDSA---- 575
Query: 667 SLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKV 726
Q + + +QA ++ + LH + NQ V
Sbjct: 576 ------NQIVRDTRNQANEII------------KDLHQKQQLSNQAV------------K 605
Query: 727 EHPATASSSVVKDIKQSPRVKRTELP---------NVGDLVHVSSFGKKGTVIKVEPSKE 777
E+ ++ + ++Q+P++K+ + GD V V S+G+ GT++ + S
Sbjct: 606 ENELISAKGAINALQQNPQLKQNRILRREKKRHDFKKGDEVFVKSYGQMGTLMD-KLSDH 664
Query: 778 EIVVQVGNMKW 788
E VQ+G +K
Sbjct: 665 EWEVQLGILKM 675
>gi|169829506|ref|YP_001699664.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
gi|168993994|gb|ACA41534.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
Length = 788
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 224/403 (55%), Gaps = 46/403 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + +VITGPNTGGKT+ LKTVGL +MA++GL + + + +++ F +FA
Sbjct: 320 VPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSQLAVFKQLFA 379
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 380 DIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELGAGTDPQEGAALAISILDEV 439
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ NA +EFD L PTY++L GVPGRS+A I+
Sbjct: 440 HGRGARV-MATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSNAFEISS 498
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL-- 636
RLGLP +++ A+ G E+ +I +E + Q + + L+ S +L K L
Sbjct: 499 RLGLPESIIERAKGFTGTDRHEVESMIASLEETRRQSEDDAERSHALLLESESLRKELQD 558
Query: 637 ----LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
R++ L+ A ++ RK+ + +A A ++ + +
Sbjct: 559 KLQAYEERKEALDKKAKEKARKI--VEEAKREAEGIIAE-------------------LR 597
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK-RTEL 751
++R +A Q V K ++ + + +E+ K +K++ +VK R +
Sbjct: 598 EMRKNADQ------VVKEHELIEARKRLEEATPLENN--------KVLKKAAQVKARAQN 643
Query: 752 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
VGD V V S+G++GT+++ + S E VVQ+G +K MK +D
Sbjct: 644 LVVGDEVKVLSYGQRGTLLE-KVSNTEWVVQMGILK--MKISD 683
>gi|329927098|ref|ZP_08281454.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
gi|328938675|gb|EGG35054.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
Length = 637
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 174/286 (60%), Gaps = 32/286 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + +++TGPNTGGKT+ LKT+GL +MA SGL I + E +++ FD+++A
Sbjct: 317 VPLDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+SQ T +SLVLLDE+GAGT+P EG+AL +S+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIIRILSQMTPKSLVLLDEVGAGTDPAEGSALAISILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + IATTH+ ELK Y NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRMGCRM-IATTHYSELKAYAYERKGVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH----VHEARHFLMLSRNLHK 634
RLGLPG +++ AR E+ E + Q +EH + E RH + R +
Sbjct: 496 RLGLPGSILEFAR-------GEVKE--------EDQRVEHMIASLEENRHTAEVEREKAE 540
Query: 635 NLLRTRRKILEHCASQRFRKVQKISD--------AAAIARSLVHKS 672
+ RK +E + +++QK+ + A A AR +V K+
Sbjct: 541 QV----RKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIVDKA 582
>gi|282882263|ref|ZP_06290897.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
gi|281297884|gb|EFA90346.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
Length = 788
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 279/595 (46%), Gaps = 122/595 (20%)
Query: 204 HGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLL 260
GR I + S KGL+ +S SG IEP+ V N+E++ + + E +L
Sbjct: 195 EGRYVIPVRNENKSKVKGLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILK 254
Query: 261 ALTEKMQVDLDEIEKMLNGII--QLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
L+E++ IE N +I ++D + A+ SL G P +
Sbjct: 255 ELSEEVAEVSTSIES--NELILREIDFIFAKGKLSLDMGANLPKV--------------- 297
Query: 319 TSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGE 378
+ I L AYHPLL RK+
Sbjct: 298 -------NKNRYIDLKNAYHPLL-----------------------NRKI---------- 317
Query: 379 KDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
VPI+I+I + L+ITGPNTGGKT+ LKT+G+ +MA+
Sbjct: 318 -------------------AVPINIYIGKDFTSLIITGPNTGGKTVTLKTLGILQLMAQY 358
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GLHI + E ++V F+++FADIGDEQS+ Q+LSTFS H+ I I+ + SLVL DE+
Sbjct: 359 GLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEILEKVDEDSLVLFDEL 418
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL S+++ E + I+TTH+ +LK + + +NA MEFD L
Sbjct: 419 GAGTDPTEGAALARSIMDFMLER-KIRCISTTHYNQLKIYALTTEGVKNASMEFDINTLS 477
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTYK+L G+PG+S+A I++RLGL ++ +AR L + E +V+ +E+ +T+
Sbjct: 478 PTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEKVLASIEKDRTK---- 533
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
R F L++ HK+ L + LE +++KI ++ A+++
Sbjct: 534 ---TREFKELAKR-HKSDLEKQNARLEI-------ELKKIENSKEKILKEAKDEARRILL 582
Query: 679 SASQARSLVHKRAQQLRP--SASQSLHCTKVG---KNQHVLTSNFQQTTVDKVEHPATAS 733
S + L+ L+ S+ Q+ + G +N N ++ ++K + P
Sbjct: 583 STKENVDLILDEISSLKAEISSDQARRIQESGDLLRNSIRKVDNDKKFVIEKAKKP---- 638
Query: 734 SSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
++DIK VGD V +SFG TV+++ SK I +Q G MK
Sbjct: 639 ---IEDIK------------VGDQVR-NSFGNISTVLELPDSKGNIYIQSGIMKM 677
>gi|357057959|ref|ZP_09118816.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
gi|355374536|gb|EHG21830.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
Length = 784
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 220/400 (55%), Gaps = 42/400 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + +L+ITGPNTGGKT+ +KT+GL ++A+SG + ++ +++P + +++A
Sbjct: 314 VPIDIELGQNFSILLITGPNTGGKTVSMKTLGLLALLAQSGCFLPTAPDSEIPVYRNIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H + I II ++ L+LLDE+GAGT+P EG AL S++ F
Sbjct: 374 DIGDEQSIEQSLSTFSAHTRNIVRIIDKAEQGDLILLDEVGAGTDPDEGAALARSIIAHF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G + +ATTH+ LKT Y+ ENA +EFD L+PTY++L G+PG S+A +I+
Sbjct: 434 LQQG-IAVVATTHYAVLKTYAYAESGIENASVEFDLKTLRPTYRLLIGIPGASNAFSISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP +V A V+ E+ER K + E R+ +++ LR
Sbjct: 493 QLGLPQDIVARAEIYISEEHTHFEHVVNELEREKQDYETKNRELRNKEAEIKSVEAR-LR 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R+ L + + L+HK AR + ++ R SA
Sbjct: 552 AERETLSNTRQE-----------------LLHK-----------AREEANNIVREARRSA 583
Query: 699 SQSLHCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN--- 753
+++ K + H + + Q ++++ S ++++P V +T P+
Sbjct: 584 EETIKSLKDQFDDHGVKERRKVIQEARNRLDEAYIQDS-----LQKNPAVGKTIRPDDIR 638
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
GD+V++ S ++GTV+ V+ +E+ VQVG ++ I+K +
Sbjct: 639 SGDIVYIESLAQEGTVLSVQ--GKELTVQVGGLRTIVKMS 676
>gi|82750751|ref|YP_416492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus RF122]
gi|123549011|sp|Q2YXD1.1|MUTS2_STAAB RecName: Full=MutS2 protein
gi|82656282|emb|CAI80696.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 782
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 216/384 (56%), Gaps = 34/384 (8%)
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK + + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSCNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>gi|333896863|ref|YP_004470737.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112128|gb|AEF17065.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 786
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 166/272 (61%), Gaps = 9/272 (3%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I + LVITGPNTGGKT+ LKTVGL +M+ SGL+I + E + V +FD++F
Sbjct: 314 VPISIHLGESFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADEGSDVAFFDNIFV 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++ TS SLVLLDE+GAGT+P EG AL MS+L+ F
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTNIVKILNNVTSNSLVLLDELGAGTDPTEGAALAMSILD-F 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ TIATTH+ ELK N+ ENA +EFD LKPTY++ G+PG+S+A I++
Sbjct: 433 LHRMNCRTIATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISK 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVI-------IEMERFKTQFLEHVHEARHFLMLSRN 631
RLGL V+ NA+ + + +++ IE E K + ++
Sbjct: 493 RLGLNDDVIDNAKSYITSEELKFEDILKDLENKRIEAENAKEEIEALKNQVESLRQEYEK 552
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
K+ R R KI+E A ++ +K+ + + A A
Sbjct: 553 KIKDTEREREKIIEK-AREKAKKILENTKATA 583
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
+ LE+DK+ + + + + G+E L+ + + +L +++ N A+ + +G+
Sbjct: 6 FKNLEFDKIINQIVNLCDSEPGKELALS--IKPYENVEKALEEIEKVNEAVSFISSYGNI 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
S +D L K+ I+ S L P + L++ L + +++ LR +E + LY+R
Sbjct: 64 SFAFKKLDEILAKAKIK-----SSLSPGQLLSLSRFLSLAGKVKVYLRNEKEESSFLYLR 118
Query: 173 --FMPLTQM--LYQLMDMLIRNEN--------------------NESLFLEVSSI----- 203
M LT + LY +D + +E+ N + ++SI
Sbjct: 119 EYNMRLTNIKELYDKIDRAVMSEDELADDASPALKEIRRQKAQINNKIRDTLNSIIASSP 178
Query: 204 -----------HGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARA 249
+GR + + + +FKGL+ SSSG IEP++ V LN++L+Q
Sbjct: 179 KELQDPIITIRNGRYVVPVKQEYRGTFKGLIHDQSSSGATLFIEPMAVVELNNDLRQLEI 238
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
E +L LTE + +DEI + + + +LDV+ A+A YS+S T P
Sbjct: 239 KEQHEVERILAELTEDVGKHVDEINENMVVLKELDVIFAKAKYSISTDSTKP 290
>gi|170755146|ref|YP_001782757.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B1 str. Okra]
gi|429246442|ref|ZP_19209762.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
gi|229486369|sp|B1IMK5.1|MUTS2_CLOBK RecName: Full=MutS2 protein
gi|169120358|gb|ACA44194.1| MutS2 family protein [Clostridium botulinum B1 str. Okra]
gi|428756532|gb|EKX79084.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
Length = 788
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALKKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I E + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---ENLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|406981818|gb|EKE03215.1| hypothetical protein ACD_20C00234G0037 [uncultured bacterium]
Length = 790
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 197/326 (60%), Gaps = 29/326 (8%)
Query: 386 SEMQVSALELAHPVPI---------DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMA 436
+E +S + HP+ I ++ I + L+ITG NTGGKT+ LKT GL V+MA
Sbjct: 297 TERYISLTRVKHPILITSIENVISNNVEIGKDWSSLIITGSNTGGKTVILKTTGLCVLMA 356
Query: 437 KSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLD 496
K+GLHI + E A + F ++FADIGDEQS+ Q+LSTFSGH+ I +I++Q ++SLVLLD
Sbjct: 357 KAGLHIPAQE-ADIYPFKNIFADIGDEQSVIQNLSTFSGHMTNIISILNQLDNESLVLLD 415
Query: 497 EIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVK 556
EIGAGT+P EG+AL ++LEA + G+ TI TTH+GELK L Y+ + F NA +EFD
Sbjct: 416 EIGAGTDPSEGSALAQAILEALHKKGA-RTIVTTHYGELKALAYTQEGFYNASVEFDIDS 474
Query: 557 LKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFL 616
L PTYK++ G+PG+S+AI IA+ LGL + NA+ +Y E++ ++ + +
Sbjct: 475 LAPTYKLIMGLPGKSNAITIAKNLGLSAEISDNAQNIYITQKDPTGEIMEGLQNTQQE-- 532
Query: 617 EHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQL 676
LSRN K + + ++ LE ++ +K++KI+ A ++ K +
Sbjct: 533 -----------LSRNAQK--IESTKEELERLETEYNQKLEKINSEKKYALNVYKK---KF 576
Query: 677 CPSASQARSLVHKRAQQLRPSASQSL 702
++AR+ + + ++ R + S+ +
Sbjct: 577 DTEITKARAEIKEILEETRRTKSEKV 602
>gi|255526069|ref|ZP_05392992.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296187117|ref|ZP_06855515.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
gi|255510255|gb|EET86572.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296048311|gb|EFG87747.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
Length = 787
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 213/399 (53%), Gaps = 33/399 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+++ + LVITGPNTGGKT+ LKTVGL +MA SGL I + E + V +F VFA
Sbjct: 315 VPLDVYLGKGFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPARENSTVSFFKEVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I NII+++ +SLVL DE+GAGT+P EG AL +S+LE
Sbjct: 375 DIGDEQSIEQSLSTFSSHMTNIVNIINKADDESLVLFDELGAGTDPTEGAALAVSILENL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK + ENA +EFD L+PTY++L G+PG+S+A I+
Sbjct: 435 KSRGCRI-VATTHYSELKVYALKVNGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISR 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ +A++ + + + ++I +++ + + EA +L+
Sbjct: 494 RLGLADYIIHDAKENINSETLQFEDLIEDLQEKSVKAEANAREAE------------MLK 541
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ ++ +Q + A I + A+++ A + + K ++L +
Sbjct: 542 LEAAKIKDKYEEKMGSLQNAREKAVIN---AQREAKRIIKEAKEEADNILKEMRELEKAG 598
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV--GD 756
S K+ + + L DK++ + + R EL NV G+
Sbjct: 599 YASDVRHKLEEERRKLAQKL-----DKIDEK----------VNKVKRDDGEELKNVREGE 643
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V S +K VI +K + VQ G MK +K D+
Sbjct: 644 EVFVPSLNQKVIVISKPDNKGNVQVQAGIMKIEVKLKDL 682
>gi|239636360|ref|ZP_04677362.1| MutS2 protein [Staphylococcus warneri L37603]
gi|239597715|gb|EEQ80210.1| MutS2 protein [Staphylococcus warneri L37603]
Length = 782
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 179/624 (28%), Positives = 296/624 (47%), Gaps = 113/624 (18%)
Query: 177 TQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSV 231
Q + Q +D +++++ N+ + V+ + R I A+ + F G++ S+SG
Sbjct: 166 NQRIRQNLDRVVKSQANQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLY 225
Query: 232 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 291
IEP S V +N+++ + R E +L LT ++ V+ D + + + LD + A+A
Sbjct: 226 IEPSSVVEMNNQISRLRNDEAVERERILAELTSQVAVESDALLLAESIMGHLDFLIAKAR 285
Query: 292 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 351
Y+ + GT P +E T+YLP
Sbjct: 286 YARAIKGTKPTF----------------------HKERTVYLPN---------------- 307
Query: 352 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 411
A+ L NT + + +E +
Sbjct: 308 AYHPLLDHNT--------------------------VVANTIEFVDDI----------ET 331
Query: 412 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 471
++ITGPNTGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLS 391
Query: 472 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 531
TFS H+K I I+ ++ SL+L DE+GAGT+P EG AL MS+L+ G+L+ +ATTH
Sbjct: 392 TFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALV-MATTH 450
Query: 532 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 591
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 592 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 651
+ G EIN +I +E+ + E E + ++ H L + ++ Q
Sbjct: 511 TMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQATHDELAK------QYQQYQN 564
Query: 652 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 711
+ K + D A + A Q SA++ + K ++LR + +
Sbjct: 565 YEK--SLMDEAK-------EKANQRVKSATKEADAILKELRELRDQKGADV-------KE 608
Query: 712 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
H L +Q D+ E K IKQ+ + ++ + GD V V S+G+K +
Sbjct: 609 HELIDKKKQLD-DQYE---------AKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEVL 657
Query: 772 VEPSKEEIVVQVGNMKWIMKFTDI 795
+EE VVQ+G +K + D+
Sbjct: 658 ELVGEEEAVVQMGILKMKLPIEDL 681
>gi|126695576|ref|YP_001090462.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542619|gb|ABO16861.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9301]
Length = 803
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 219/428 (51%), Gaps = 74/428 (17%)
Query: 218 FKGLLLSSSGIGSVI--EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEK 275
FKG++ SS G+ + EP S V +++ A +T E +L + + + + + +
Sbjct: 219 FKGIIHDSSSSGNTVYFEPDSVVNKGNKIASLEARITAEEFKLLKKWSLVVSDNSENLIE 278
Query: 276 MLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPK 335
M +++L+ R+ YS GG +P + P+ S + +
Sbjct: 279 MAAILLRLENALTRSRYSKWIGGKTP----------TFEKSPIISLIGFT---------- 318
Query: 336 AYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALEL 395
HPLL+ +HK+K
Sbjct: 319 --HPLLIWEHKKKGA--------------------------------------------- 331
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
PV +D +I R +V+ ITGPNTGGKT LK +GL+++MA++GL I S+ +P+ +
Sbjct: 332 CPPVAVDFYINRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPN 391
Query: 456 VFADIGDEQSLSQSLSTFSGH---LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
++ DIGD QSL ++LSTFSGH +K+I +++ S+VLLDEIG+GT+PLEG+AL M
Sbjct: 392 IYVDIGDNQSLEENLSTFSGHISRIKEILDLLDHKKGLSVVLLDEIGSGTDPLEGSALAM 451
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
+LL+ FA S +T ATTH+G++K LKY++ FEN + FDE LKP Y + WG+PGRS+
Sbjct: 452 ALLKEFANK-SDITFATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSN 510
Query: 573 AINIAERLGL-PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRN 631
A++I++R+GL I+ + A L IN +I +E K + A + +
Sbjct: 511 ALSISKRIGLDESILNEAANYLKPKEVDNINSIIKGLEEEKIKQQNSAEAAAELIARTEI 570
Query: 632 LHKNLLRT 639
LH L R
Sbjct: 571 LHDELKRN 578
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
ES+ +LEWD L +SSFA T +G+ A L+ + I Y+ S RLL+ET +++ +
Sbjct: 19 ESISLLEWDSLKTHLSSFALTEMGKRAILS--FDIPSEYESSKRLLNETVEITQLENNLD 76
Query: 112 CSLDLTGV 119
S+ +GV
Sbjct: 77 KSISFSGV 84
>gi|323694011|ref|ZP_08108195.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|355625337|ref|ZP_09048200.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
gi|323501947|gb|EGB17825.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|354821364|gb|EHF05752.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
Length = 800
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 221/412 (53%), Gaps = 60/412 (14%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI+I++ + +L++TGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F+ VFA
Sbjct: 315 VPINIYLGDQFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFEEVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ Q+ S SL L DE+GAGT+P EG AL +++L +F
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNIVSILEQADSNSLCLFDELGAGTDPTEGAALAIAVL-SF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S T+ATTH+ ELK + ENAC EF L+PTY++L G+PG+S+A I++
Sbjct: 434 LHNMSCRTMATTHYSELKVYALTTPGVENACCEFSLETLRPTYRLLIGIPGKSNAFAISK 493
Query: 579 RLGLPGIVVQNARQLYGA---------ASAEINEVIIEMERFK-TQFLEHVHEARHFLML 628
+LGLP ++++A++ A E N V IE ER + + E V +L
Sbjct: 494 KLGLPDYIIEDAKKHIEQEDESFEDLLADLEDNRVTIEKERAEIASYKEQVA------IL 547
Query: 629 SRNLHKNLLR---TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS 685
R L + R + K+LE + R +Q D A +++ A++ S
Sbjct: 548 KRRLEQKEERFSEQKDKMLEKAREEAQRILQDAKDTADQTIRSINRLAKE---------S 598
Query: 686 LVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDK--VEHPATASSSVVKDIKQS 743
V+K + R L + +DK PA +V S
Sbjct: 599 GVNKELEAERSKLRNKL------------------SDIDKKLAVKPAVPKKAV------S 634
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
P+ R +GD V V S KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 635 PKSLR-----LGDTVRVLSMNLKGTVSSLPNAKGDLYVQMGILRSLVNIKDL 681
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 50/294 (17%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDET-NAAIEMQKHG 110
++L+ LE++K+ + +A T +G+ TL + + + ++ R ET +AA ++ G
Sbjct: 4 KALKTLEYNKIIAQLEEYASTQIGK--TLCRELVPSCSLEEIRRNQTETTDAATRVRMKG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLR---AAIKEDA 167
S L GV V+ +++ + S L E LAV +LL + + R + + +D+
Sbjct: 62 S--LSFGGV--KDVRGSLKRLEIGSSLNIIELLAVSSLLTVTARAKAYGRREESELPDDS 117
Query: 168 --DLYIRFMPLTQMLYQLMDMLIRNE--------------------------------NN 193
+++ PLT + ++ +I + N+
Sbjct: 118 LDEMFRTLEPLTPVNTEIKRCIISEDDVSDDASPGLSKVRKSMKIIAGRVHTQLNSVLNS 177
Query: 194 ESLFLEVSSI---HGRLCIRTGAD-QLSFKGLLLSSSGIGSVI--EPLSAVPLNDELQQA 247
+L+ + I GR C+ ++ + G++ S GS I EP++ V LN+EL++
Sbjct: 178 SRAYLQEAVITMRDGRYCLPVKSEYKNQVPGMVHDQSSTGSTIFIEPMAVVKLNNELREL 237
Query: 248 RASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ E VL AL+ ++ D I L + +LD + A+A S F T P
Sbjct: 238 EIQEKREIEFVLTALSGELVPYTDTIALNLELLAKLDFIFAKAALSRHFNCTEP 291
>gi|229175259|ref|ZP_04302774.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
gi|228608091|gb|EEK65398.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
Length = 786
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 220/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVINQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A + + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKKEAEGIIRELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIISLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|377809473|ref|YP_005004694.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
gi|361056214|gb|AEV95018.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
Length = 786
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 201/385 (52%), Gaps = 75/385 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG IEP + V LN++L+Q + +V E+ + L+E + D +++ + +
Sbjct: 217 SASGQTLYIEPEAVVELNNDLRQNQVAVVHEEQRIFQELSELVAPHRDTLKQNDHILGHF 276
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D++NA+A Y+ T P K+S + I L KA HPL
Sbjct: 277 DLLNAKARYAAKIKATEP-------------------KISEDNQ---INLRKARHPL--- 311
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
+ P + V DI
Sbjct: 312 ---------------------------------------IDPKRV----------VGNDI 322
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ + + L+ITGPNTGGKTI LKTVGL +M +SG+ I ++E + + FD +FADIGDE
Sbjct: 323 RLGKDFKTLIITGPNTGGKTISLKTVGLLQLMGQSGIFIPANENSTIGIFDEIFADIGDE 382
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ Q+LSTFS H+ I +I++Q + SLVL DE+GAGT+P EG AL +++L+ S
Sbjct: 383 QSIEQNLSTFSSHMDNIIHILAQIDNNSLVLFDELGAGTDPKEGAALAIAILDDVRNHAS 442
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
L+ +ATTH+ ELKT Y NA MEF+ LKPTYK+L G+PG+S+A +I+ RLGL
Sbjct: 443 LV-MATTHYPELKTYGYERSETINASMEFNVETLKPTYKLLIGIPGQSNAFDISSRLGLD 501
Query: 584 GIVVQNARQLYGAASAEINEVIIEM 608
++ AR L S ++N +I ++
Sbjct: 502 NRLISQARDLVDQDSQDLNNMIKDL 526
>gi|386726811|ref|YP_006193137.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
gi|384093936|gb|AFH65372.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
Length = 775
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 219/397 (55%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + K +++TGPNTGGKT+ LKT+GL +MA SG+ + + E +++ FD+++A
Sbjct: 304 VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYA 363
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I I+ + T +SLVLLDE+GAGT+P EG+AL +S+L+
Sbjct: 364 DIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYM 423
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 424 HRMGCRI-VATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAE 482
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++NAR G + +I +E+ Q A + ++ L + +
Sbjct: 483 RLGLSRSIIENARGQVGEEEQRVESMIATLEQNTIQ-------AEAERVTAQELRREVET 535
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R K+ + RF + + L+ K+ ++ + ++AR + +LR
Sbjct: 536 LREKL--NAERHRFEEQRD---------KLLEKAEREGREAVAKARREAEEVIAELR--- 581
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
L + G + S ++ D P S K + Q P+ K+ E GD V
Sbjct: 582 --RLQREEAGGVKDHKLSELKKKLNDAA--PELRS----KQVSQLPK-KKPETIGPGDEV 632
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V++ G++G V+ V + +E VQ+G +K + D+
Sbjct: 633 LVTNLGQRGHVVDV-VNAQEYTVQLGILKMKVNKADL 668
>gi|299535519|ref|ZP_07048840.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|424739203|ref|ZP_18167624.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
gi|298728719|gb|EFI69273.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|422946841|gb|EKU41246.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
Length = 788
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 226/409 (55%), Gaps = 46/409 (11%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L + +P DI + +VITGPNTGGKT+ LKTVGL +MA++GL + + + +++
Sbjct: 314 LPIDSAIPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSELAV 373
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +
Sbjct: 374 FEQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELGAGTDPQEGAALAI 433
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L+ G+ + +ATTH+ ELK Y+ NA +EFD L PTY++L GVPGRS+
Sbjct: 434 SILDEVHGRGARV-MATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSN 492
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ RLGLP ++ A+ G E+ +I +E + Q + + L+ S L
Sbjct: 493 AFEISSRLGLPESIIDRAKGFTGTDRHEVESMIASLEETRRQSEDDAERSHALLLESETL 552
Query: 633 HKNL------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL 686
K L R++ L+ A ++ RK+ + +A A +++ +
Sbjct: 553 RKELQDKLQAYEERKEALDKKAKEKARKI--VDEAKREAEAIIAE--------------- 595
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
+++R +A Q + +H L + ++E + V +K++ +V
Sbjct: 596 ----LREMRKNADQVV-------KEHELIEARK-----RLEEATPLEDNKV--LKKAAQV 637
Query: 747 K-RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
K R + VGD V V S+G++GT+++ + S E VVQ+G +K MK +D
Sbjct: 638 KARAQNLVVGDEVKVLSYGQRGTLLE-KVSNTEWVVQMGILK--MKISD 683
>gi|427394069|ref|ZP_18887571.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
gi|425730239|gb|EKU93079.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
Length = 793
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 186/686 (27%), Positives = 310/686 (45%), Gaps = 131/686 (19%)
Query: 124 VKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRFMP-------- 175
+K+ RE + + N AV +L L +++A + ED + P
Sbjct: 105 IKNFFREAQEDDIVLEN-LYAVSDMLNPLSDLSKTIQAVVDEDGRVVDSASPKLKGIRTG 163
Query: 176 ---LTQMLYQLMDMLIRNENNESLFLEVSSI-HGRLCIRTGADQLS-FKGLLLSSSGIGS 230
+ Q + Q ++ + R + L + +I + R + AD + F G++ S G
Sbjct: 164 IKQVEQSIRQKLENITRGSKSRYLTDAIITIRNDRYVVPVKADSKNVFGGIVHDQSATGQ 223
Query: 231 V--IEPLSAVPLNDELQQARASVTKAEEDVLLA-LTEKMQVDLDEIEKMLNGIIQLDVVN 287
+EP S + N++L++ S KAE D LLA L++K+ ++E+ L + LD +
Sbjct: 224 TLFVEPQSVLNQNNKLKEY-TSQEKAEVDRLLADLSQKITPYSKDLEQDLQVLTLLDFIA 282
Query: 288 ARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQ 347
A+A YS + P + RE +Y A HPL+
Sbjct: 283 AKAKYSRQLSASQP--------------------IVDDNREIALY--GARHPLI------ 314
Query: 348 KTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIAR 407
P ++ V DI +
Sbjct: 315 ------------------------------------DPDQV----------VENDITLGL 328
Query: 408 KTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLS 467
+ +V+TGPNTGGKT+ LKT+GL +M +SGLH+ + +++ F+ +ADIGDEQS+
Sbjct: 329 DYKAIVVTGPNTGGKTVVLKTLGLLQIMGQSGLHLPVKDNSRIGVFEKCYADIGDEQSIE 388
Query: 468 QSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTI 527
QSLSTFS H+ I +I+S +L++LDE+GAGT+P EG AL +++L+ + GS + I
Sbjct: 389 QSLSTFSSHMTNIVSILSDIDEATLIVLDELGAGTDPQEGAALAIAILDYISARGSTVVI 448
Query: 528 ATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVV 587
T+H+ ELK Y+ NA M FD LKPTYK+L G+PGRS+A +A+RLGL ++
Sbjct: 449 -TSHYPELKAYAYNRPETINASMAFDVNSLKPTYKLLLGIPGRSNAFEVAQRLGLNNEII 507
Query: 588 QNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 647
++QL S +N++I ++E + + + + L + LH +L E
Sbjct: 508 AASKQLMSGESQSVNQMIEDLEAKRQAYHKRNQSLQKELYDASKLHNDLKNFYEAYQERS 567
Query: 648 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQSLHCTK 706
Q++ D A + + + AQ+ QA ++ R +QL + ++
Sbjct: 568 --------QELEDKAKDKANRIVEKAQE------QADQIIDDLRQKQLNQPSEDNI---- 609
Query: 707 VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKK 766
+H + + K E + V++ K+ + VGD VHV SF ++
Sbjct: 610 ---KEHEFIDAKSRLSNMKYEQKHLKQNKVLQKEKEKKALA------VGDQVHVDSFDQE 660
Query: 767 GTVIKVEPSKEEIVVQVGNMKWIMKF 792
GT +V Q G+ KW+++
Sbjct: 661 GT----------LVDQTGDSKWVVQM 676
>gi|390935290|ref|YP_006392795.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570791|gb|AFK87196.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 786
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 167/266 (62%), Gaps = 13/266 (4%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI + + + LVITGPNTGGKT+ LKTVGL +M+ SGL+I + + + V +FD+VF
Sbjct: 314 VPISVHLGQSFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADDGSDVAFFDNVFV 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++ S SLVLLDE+GAGT+P EG AL MS+L+ F
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTNIVKILNNVNSNSLVLLDELGAGTDPTEGAALAMSILD-F 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ TIATTH+ ELK N+ ENA +EFD LKPTY++ G+PG+S+A I++
Sbjct: 433 LHRMNCRTIATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISK 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKT------QFLEHVHEARHFLMLSRNL 632
RLGL +++NA+ + +++ ++E +T Q +E + RH L
Sbjct: 493 RLGLNDDIIENAKNYITSEELRFEDILRDLENKRTEAENAKQKIEELK--RHVESLKDEY 550
Query: 633 HKNLL---RTRRKILEHCASQRFRKV 655
K + R R KI+E A ++ +K+
Sbjct: 551 EKKVKEAEREREKIIEK-AREKAKKI 575
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 51/292 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
+ LE+DK+ + +S + G+EA L + +++L+ +++ N A+ + +G+
Sbjct: 6 FKNLEFDKIINRISDLCDSEPGKEAALD--IKPYENVEEALKEIEKVNEAVSFIVSYGNM 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
S +D L K+ I S L P + L++ L + ++ LR +E Y+R
Sbjct: 64 SFSFKKIDDILAKAKI-----GSSLNPGQLLSLSRFLSLAGKVKAYLRNEKEEGIFPYLR 118
Query: 173 --FMPLTQM--LYQLMDMLIRNEN--------------------NESLFLEVSSI----- 203
M LT + LY +D + +E+ N + ++SI
Sbjct: 119 EYNMRLTNIRELYDKIDRTVISEDELADDASPALKEIRRQKAHINNKIRDTLNSIIASSS 178
Query: 204 -----------HGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARA 249
+GR + + + +FKGL+ SSSG IEP++ V LN++L+Q
Sbjct: 179 KELQDPIITIRNGRYVVPVKQEYRGTFKGLVHDQSSSGATLFIEPMAVVELNNDLRQLEI 238
Query: 250 SVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
E +L LT+++ DEI + + + +LDV+ A+A YS++ T P
Sbjct: 239 KEQHEIERILAELTDEVGEHADEIYENMVALKELDVIFAKAKYSINTDSTKP 290
>gi|229032198|ref|ZP_04188171.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
gi|228728978|gb|EEL79981.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
Length = 786
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 220/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A + + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKKEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + G+
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGN 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LATHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|379724074|ref|YP_005316205.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
gi|378572746|gb|AFC33056.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
Length = 794
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 219/397 (55%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + K +++TGPNTGGKT+ LKT+GL +MA SG+ + + E +++ FD+++A
Sbjct: 323 VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYA 382
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I I+ + T +SLVLLDE+GAGT+P EG+AL +S+L+
Sbjct: 383 DIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYM 442
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 443 HRMGCRI-VATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAE 501
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++NAR G + +I +E+ Q EA R + L R
Sbjct: 502 RLGLSRSIIENARGQVGEEEQRVESMIATLEQNTIQA-----EA------ERATAQELRR 550
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E ++R R ++ D L+ K+ ++ + ++AR + +LR
Sbjct: 551 EVETLREKLNAERHR-FEEQRD------KLLEKAEREGREAVAKARREAEEVIAELR--- 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
L + G + S ++ D P S K + Q P+ K+ E GD V
Sbjct: 601 --RLQREEAGGVKDHKLSELKKKLNDAA--PELRS----KQVSQLPK-KKPETIGPGDEV 651
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V++ G++G V+ V + +E VQ+G +K + D+
Sbjct: 652 LVTNLGQRGHVVDV-VNAQEYTVQLGILKMKVNKADL 687
>gi|387819388|ref|YP_005679735.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
gi|322807432|emb|CBZ05006.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
Length = 788
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I E + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---ENLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHEGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|423389147|ref|ZP_17366373.1| MutS2 protein [Bacillus cereus BAG1X1-3]
gi|401642422|gb|EJS60133.1| MutS2 protein [Bacillus cereus BAG1X1-3]
Length = 786
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 221/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A + + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKKEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
V H L ++ A+ +VK KQ VK T + G
Sbjct: 602 L-------VNVKDHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|257883965|ref|ZP_05663618.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257819803|gb|EEV46951.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 786
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|431546278|ref|ZP_19518903.1| MutS2 protein [Enterococcus faecium E1731]
gi|430591597|gb|ELB29626.1| MutS2 protein [Enterococcus faecium E1731]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|430855305|ref|ZP_19473014.1| MutS2 protein [Enterococcus faecium E1392]
gi|430547311|gb|ELA87247.1| MutS2 protein [Enterococcus faecium E1392]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|430825904|ref|ZP_19444102.1| MutS2 protein [Enterococcus faecium E0164]
gi|430445612|gb|ELA55342.1| MutS2 protein [Enterococcus faecium E0164]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|312870454|ref|ZP_07730574.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
gi|311094011|gb|EFQ52335.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
Length = 790
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 223/413 (53%), Gaps = 46/413 (11%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L ++ QV+ + HP V DI + + ++ITGPNTGGKTI LKT+G+ +M
Sbjct: 294 LLSADNQVNLRKAWHPLIARDQAVANDIKLGGDYQAVIITGPNTGGKTITLKTLGIIQLM 353
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
++GL I + E + + FD+VFADIGDEQSL Q+LSTFSGH+ + I+ Q T+ SLVLL
Sbjct: 354 GQAGLFIPAQEGSTIGVFDNVFADIGDEQSLEQNLSTFSGHMDNVKTILDQLTANSLVLL 413
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL M++L+ + GSL+ I TTH+ ELK Y NA MEFD+
Sbjct: 414 DELGAGTDPKEGAALAMAILDEIGQRGSLVMI-TTHYPELKVYGYDRAKTINASMEFDQA 472
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
L+PTY++L G+PGRS+ + IA+RLG+ ++ A+ L S ++N +I ++ + Q
Sbjct: 473 TLQPTYRLLLGIPGRSNGLEIAKRLGIGSAIISEAQSLVSDDSQDLNAMIGDLVEQRKQA 532
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
E + ++ + L + L+ QR + +++ ARS ++ Q
Sbjct: 533 REESERLAKLVAQNQADQEEL----NQKLDRFNEQRDQLLER-------ARS---QANHQ 578
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ + +A ++H +QL + ++ Q L + Q ++P +S
Sbjct: 579 VAQAKRKADRIIH-HLRQLEIQQGAGVKENQLMDAQGALNALHQ-------DNPRLQHNS 630
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V+K K+ + + GD V V S+G+ G E++ + GN KW
Sbjct: 631 VLKRAKEKHDLHK------GDAVLVKSYGQHG----------ELLSRRGNHKW 667
>gi|257882656|ref|ZP_05662309.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|294622756|ref|ZP_06701711.1| MutS2 family protein [Enterococcus faecium U0317]
gi|416132269|ref|ZP_11597881.1| MutS2 family protein [Enterococcus faecium E4452]
gi|424795296|ref|ZP_18221164.1| MutS2 family protein [Enterococcus faecium S447]
gi|424855055|ref|ZP_18279381.1| MutS2 family protein [Enterococcus faecium R499]
gi|424950176|ref|ZP_18365348.1| MutS2 family protein [Enterococcus faecium R496]
gi|424957193|ref|ZP_18371933.1| MutS2 family protein [Enterococcus faecium R446]
gi|424960033|ref|ZP_18374581.1| MutS2 family protein [Enterococcus faecium P1986]
gi|424966350|ref|ZP_18380154.1| MutS2 family protein [Enterococcus faecium P1140]
gi|424994917|ref|ZP_18406830.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|424998362|ref|ZP_18410055.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|425001768|ref|ZP_18413255.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|425004274|ref|ZP_18415594.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|425012205|ref|ZP_18423037.1| MutS2 family protein [Enterococcus faecium E422]
gi|425018028|ref|ZP_18428507.1| MutS2 family protein [Enterococcus faecium C621]
gi|425032607|ref|ZP_18437636.1| MutS2 family protein [Enterococcus faecium 515]
gi|430827998|ref|ZP_19446128.1| MutS2 protein [Enterococcus faecium E0269]
gi|431746632|ref|ZP_19535457.1| MutS2 protein [Enterococcus faecium E2134]
gi|431767631|ref|ZP_19556078.1| MutS2 protein [Enterococcus faecium E1321]
gi|431775339|ref|ZP_19563612.1| MutS2 protein [Enterococcus faecium E2560]
gi|431780207|ref|ZP_19568392.1| MutS2 protein [Enterococcus faecium E4389]
gi|431781496|ref|ZP_19569643.1| MutS2 protein [Enterococcus faecium E6012]
gi|431786129|ref|ZP_19574145.1| MutS2 protein [Enterococcus faecium E6045]
gi|257818314|gb|EEV45642.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|291597807|gb|EFF28944.1| MutS2 family protein [Enterococcus faecium U0317]
gi|364093369|gb|EHM35646.1| MutS2 family protein [Enterococcus faecium E4452]
gi|402924563|gb|EJX44761.1| MutS2 family protein [Enterococcus faecium S447]
gi|402931801|gb|EJX51358.1| MutS2 family protein [Enterococcus faecium R499]
gi|402933643|gb|EJX53063.1| MutS2 family protein [Enterococcus faecium R496]
gi|402944145|gb|EJX62582.1| MutS2 family protein [Enterococcus faecium R446]
gi|402949000|gb|EJX67094.1| MutS2 family protein [Enterococcus faecium P1986]
gi|402956711|gb|EJX74151.1| MutS2 family protein [Enterococcus faecium P1140]
gi|402978799|gb|EJX94516.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|402983441|gb|EJX98841.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|402985390|gb|EJY00600.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|402990027|gb|EJY04923.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|402994063|gb|EJY08626.1| MutS2 family protein [Enterococcus faecium E422]
gi|403003183|gb|EJY17093.1| MutS2 family protein [Enterococcus faecium C621]
gi|403012545|gb|EJY25764.1| MutS2 family protein [Enterococcus faecium 515]
gi|430484079|gb|ELA61114.1| MutS2 protein [Enterococcus faecium E0269]
gi|430608534|gb|ELB45780.1| MutS2 protein [Enterococcus faecium E2134]
gi|430630584|gb|ELB66939.1| MutS2 protein [Enterococcus faecium E1321]
gi|430640686|gb|ELB76520.1| MutS2 protein [Enterococcus faecium E4389]
gi|430643055|gb|ELB78811.1| MutS2 protein [Enterococcus faecium E2560]
gi|430646202|gb|ELB81696.1| MutS2 protein [Enterococcus faecium E6045]
gi|430649441|gb|ELB84818.1| MutS2 protein [Enterococcus faecium E6012]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|69245126|ref|ZP_00603250.1| MutS 2 protein [Enterococcus faecium DO]
gi|257879660|ref|ZP_05659313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257890326|ref|ZP_05669979.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260559678|ref|ZP_05831858.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|293560080|ref|ZP_06676584.1| MutS2 family protein [Enterococcus faecium E1162]
gi|294614397|ref|ZP_06694313.1| MutS2 family protein [Enterococcus faecium E1636]
gi|314938141|ref|ZP_07845446.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|314943818|ref|ZP_07850553.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|314949777|ref|ZP_07853087.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|314951185|ref|ZP_07854243.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|314994416|ref|ZP_07859700.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|314995612|ref|ZP_07860706.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|383329426|ref|YP_005355310.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|389869286|ref|YP_006376709.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|415898673|ref|ZP_11551403.1| MutS2 family protein [Enterococcus faecium E4453]
gi|424789896|ref|ZP_18216506.1| MutS2 family protein [Enterococcus faecium V689]
gi|424912749|ref|ZP_18336124.1| MutS2 family protein [Enterococcus faecium R497]
gi|424955437|ref|ZP_18370273.1| MutS2 family protein [Enterococcus faecium R494]
gi|424964246|ref|ZP_18378359.1| MutS2 family protein [Enterococcus faecium P1190]
gi|424970080|ref|ZP_18383617.1| MutS2 family protein [Enterococcus faecium P1139]
gi|424974783|ref|ZP_18387998.1| MutS2 family protein [Enterococcus faecium P1137]
gi|424978200|ref|ZP_18391145.1| MutS2 family protein [Enterococcus faecium P1123]
gi|424980291|ref|ZP_18393093.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|424983595|ref|ZP_18396176.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|424987917|ref|ZP_18400268.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|424991796|ref|ZP_18403927.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|425007017|ref|ZP_18418168.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|425016051|ref|ZP_18426638.1| MutS2 family protein [Enterococcus faecium E417]
gi|425021060|ref|ZP_18431339.1| MutS2 family protein [Enterococcus faecium C497]
gi|425024153|ref|ZP_18434239.1| MutS2 family protein [Enterococcus faecium C1904]
gi|425035142|ref|ZP_18439993.1| MutS2 family protein [Enterococcus faecium 514]
gi|425039209|ref|ZP_18443767.1| MutS2 family protein [Enterococcus faecium 513]
gi|425041479|ref|ZP_18445872.1| MutS2 family protein [Enterococcus faecium 511]
gi|425046563|ref|ZP_18450570.1| MutS2 family protein [Enterococcus faecium 510]
gi|425049153|ref|ZP_18453021.1| MutS2 family protein [Enterococcus faecium 509]
gi|425060412|ref|ZP_18463707.1| MutS2 family protein [Enterococcus faecium 503]
gi|430831133|ref|ZP_19449186.1| MutS2 protein [Enterococcus faecium E0333]
gi|430852078|ref|ZP_19469813.1| MutS2 protein [Enterococcus faecium E1258]
gi|431003613|ref|ZP_19488711.1| MutS2 protein [Enterococcus faecium E1578]
gi|431251925|ref|ZP_19503983.1| MutS2 protein [Enterococcus faecium E1623]
gi|431755260|ref|ZP_19543914.1| MutS2 protein [Enterococcus faecium E2883]
gi|431771238|ref|ZP_19559624.1| MutS2 protein [Enterococcus faecium E1644]
gi|431772678|ref|ZP_19561016.1| MutS2 protein [Enterococcus faecium E2369]
gi|68195969|gb|EAN10402.1| MutS 2 protein [Enterococcus faecium DO]
gi|257813888|gb|EEV42646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257826686|gb|EEV53312.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260074346|gb|EEW62668.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|291592705|gb|EFF24298.1| MutS2 family protein [Enterococcus faecium E1636]
gi|291605947|gb|EFF35377.1| MutS2 family protein [Enterococcus faecium E1162]
gi|313590200|gb|EFR69045.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|313591188|gb|EFR70033.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|313596664|gb|EFR75509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|313597542|gb|EFR76387.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|313642488|gb|EFS07068.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|313643850|gb|EFS08430.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|364089863|gb|EHM32509.1| MutS2 family protein [Enterococcus faecium E4453]
gi|378939120|gb|AFC64192.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|388534535|gb|AFK59727.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|402921430|gb|EJX41876.1| MutS2 family protein [Enterococcus faecium V689]
gi|402927678|gb|EJX47618.1| MutS2 family protein [Enterococcus faecium R497]
gi|402934061|gb|EJX53454.1| MutS2 family protein [Enterococcus faecium R494]
gi|402947097|gb|EJX65327.1| MutS2 family protein [Enterococcus faecium P1190]
gi|402955532|gb|EJX73054.1| MutS2 family protein [Enterococcus faecium P1137]
gi|402962705|gb|EJX79623.1| MutS2 family protein [Enterococcus faecium P1139]
gi|402962932|gb|EJX79835.1| MutS2 family protein [Enterococcus faecium P1123]
gi|402966828|gb|EJX83433.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|402971214|gb|EJX87503.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|402973400|gb|EJX89529.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|402975823|gb|EJX91752.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|402993517|gb|EJY08117.1| MutS2 family protein [Enterococcus faecium E417]
gi|402995904|gb|EJY10320.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|403007752|gb|EJY21300.1| MutS2 family protein [Enterococcus faecium C497]
gi|403007864|gb|EJY21411.1| MutS2 family protein [Enterococcus faecium C1904]
gi|403017153|gb|EJY29929.1| MutS2 family protein [Enterococcus faecium 513]
gi|403018752|gb|EJY31412.1| MutS2 family protein [Enterococcus faecium 514]
gi|403024013|gb|EJY36210.1| MutS2 family protein [Enterococcus faecium 510]
gi|403025767|gb|EJY37812.1| MutS2 family protein [Enterococcus faecium 511]
gi|403028786|gb|EJY40587.1| MutS2 family protein [Enterococcus faecium 509]
gi|403042608|gb|EJY53554.1| MutS2 family protein [Enterococcus faecium 503]
gi|430482004|gb|ELA59145.1| MutS2 protein [Enterococcus faecium E0333]
gi|430542660|gb|ELA82768.1| MutS2 protein [Enterococcus faecium E1258]
gi|430561702|gb|ELB00956.1| MutS2 protein [Enterococcus faecium E1578]
gi|430578351|gb|ELB16903.1| MutS2 protein [Enterococcus faecium E1623]
gi|430617260|gb|ELB54134.1| MutS2 protein [Enterococcus faecium E2883]
gi|430633763|gb|ELB69917.1| MutS2 protein [Enterococcus faecium E1644]
gi|430637757|gb|ELB73756.1| MutS2 protein [Enterococcus faecium E2369]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|430860620|ref|ZP_19478219.1| MutS2 protein [Enterococcus faecium E1573]
gi|430552018|gb|ELA91768.1| MutS2 protein [Enterococcus faecium E1573]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|430843631|ref|ZP_19461530.1| MutS2 protein [Enterococcus faecium E1050]
gi|430497490|gb|ELA73527.1| MutS2 protein [Enterococcus faecium E1050]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|293568794|ref|ZP_06680108.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430819495|ref|ZP_19438147.1| MutS2 protein [Enterococcus faecium E0045]
gi|430834320|ref|ZP_19452327.1| MutS2 protein [Enterococcus faecium E0679]
gi|431149562|ref|ZP_19499420.1| MutS2 protein [Enterococcus faecium E1620]
gi|431230237|ref|ZP_19502440.1| MutS2 protein [Enterococcus faecium E1622]
gi|431301457|ref|ZP_19507776.1| MutS2 protein [Enterococcus faecium E1626]
gi|431764575|ref|ZP_19553112.1| MutS2 protein [Enterococcus faecium E4215]
gi|291588511|gb|EFF20345.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430440567|gb|ELA50814.1| MutS2 protein [Enterococcus faecium E0045]
gi|430485551|gb|ELA62457.1| MutS2 protein [Enterococcus faecium E0679]
gi|430574223|gb|ELB13001.1| MutS2 protein [Enterococcus faecium E1622]
gi|430575451|gb|ELB14167.1| MutS2 protein [Enterococcus faecium E1620]
gi|430580647|gb|ELB19114.1| MutS2 protein [Enterococcus faecium E1626]
gi|430630715|gb|ELB67064.1| MutS2 protein [Enterococcus faecium E4215]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|168179617|ref|ZP_02614281.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226950552|ref|YP_002805643.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A2 str. Kyoto]
gi|421835524|ref|ZP_16270271.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
gi|254766595|sp|C1FKL4.1|MUTS2_CLOBJ RecName: Full=MutS2 protein
gi|182669561|gb|EDT81537.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226843815|gb|ACO86481.1| MutS2 family protein [Clostridium botulinum A2 str. Kyoto]
gi|409742817|gb|EKN42043.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
Length = 788
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I E + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---ENLQEKSIKAEEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHEGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|424819498|ref|ZP_18244589.1| MutS2 family protein [Enterococcus faecium R501]
gi|402926153|gb|EJX46215.1| MutS2 family protein [Enterococcus faecium R501]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|357011634|ref|ZP_09076633.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus elgii B69]
Length = 795
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 219/400 (54%), Gaps = 38/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + +++TGPNTGGKT+ LKT+GL +MA +GL + + E +++ FD++FA
Sbjct: 324 VPLDVELGNRYSTIIVTGPNTGGKTVSLKTIGLLSLMAMAGLFVPAEEGSQLCVFDAIFA 383
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I I+ + T +SLVLLDE+GAGT+P EG+AL +S+LE
Sbjct: 384 DIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILEHM 443
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK + NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 444 HRMGCRI-VATTHYSELKAYAFDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAE 502
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ +AR G + +I +E + Q A R
Sbjct: 503 RLGLAKTIIDHARGQVGEEDQRVESMIATLEENRLQAEAERESAE--------------R 548
Query: 639 TRRKI---LEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
RR++ E A++R R+ ++ D L ++ ++ + ++AR + +LR
Sbjct: 549 NRREVETLREQLAAER-RRFEEQKD------KLFERAEREAQEAVAKARREADEIITELR 601
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ K H L S ++ D P S S +PR K+ + G
Sbjct: 602 RIQREEAGGVK----DHKL-SELKRRMNDAA--PELRSKSKAG----TPR-KKADRIGPG 649
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V++ G++G V+++ S+ E+ VQ+G +K + D+
Sbjct: 650 DEVLVTNLGQRGHVVEL-VSETEVTVQLGILKMKVNKADL 688
>gi|430946889|ref|ZP_19485669.1| MutS2 protein [Enterococcus faecium E1576]
gi|430558286|gb|ELA97705.1| MutS2 protein [Enterococcus faecium E1576]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|302874999|ref|YP_003843632.1| MutS2 family protein [Clostridium cellulovorans 743B]
gi|302577856|gb|ADL51868.1| MutS2 family protein [Clostridium cellulovorans 743B]
Length = 784
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 201/392 (51%), Gaps = 79/392 (20%)
Query: 217 SFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEED-VLLALTEKMQVDLDEI 273
S +GL+ S GS IEP++ V LN+E+++ KAE D +L L+ K+ D++ I
Sbjct: 205 SVQGLVHDQSSTGSTLFIEPIALVNLNNEIKELLLK-EKAEIDRILQELSNKVYDDINVI 263
Query: 274 EKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYL 333
E + +LD + A+A Y+ G T P I ++ + L
Sbjct: 264 ENNSLIVTELDFIFAKAKYANDLGCTIPKI----------------------NKDGNVDL 301
Query: 334 PKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSAL 393
+A HPLL RK+
Sbjct: 302 IEARHPLL-----------------------DRKIV------------------------ 314
Query: 394 ELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWF 453
VP DI + R+ LVITGPNTGGKT+ LKT+GL +MA SGL I + E + V +F
Sbjct: 315 -----VPSDIKLGREFTSLVITGPNTGGKTVTLKTLGLIELMALSGLLIPARENSTVGFF 369
Query: 454 DSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMS 513
+FADIGDEQS+ QSLSTFS H+ I +II + SL L DE+GAGT+P EG AL +S
Sbjct: 370 KEIFADIGDEQSIEQSLSTFSSHMTNIVSIIENADEHSLALFDELGAGTDPTEGAALAIS 429
Query: 514 LLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSA 573
+LE + L +ATTH+ ELK + ENA +EFD LKPTY++L G+PG+S+A
Sbjct: 430 ILENLRMNKVKL-VATTHYSELKGYALKTENVENASVEFDVETLKPTYRLLIGIPGKSNA 488
Query: 574 INIAERLGLPGIVVQNARQLYGAASAEINEVI 605
I+ RLGLP ++ NA++ + E ++I
Sbjct: 489 FEISRRLGLPDYIITNAKENIARETLEFEDLI 520
>gi|431414518|ref|ZP_19512337.1| MutS2 protein [Enterococcus faecium E1630]
gi|431759732|ref|ZP_19548343.1| MutS2 protein [Enterococcus faecium E3346]
gi|430589251|gb|ELB27396.1| MutS2 protein [Enterococcus faecium E1630]
gi|430625913|gb|ELB62516.1| MutS2 protein [Enterococcus faecium E3346]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|294617527|ref|ZP_06697157.1| MutS2 family protein [Enterococcus faecium E1679]
gi|291596133|gb|EFF27396.1| MutS2 family protein [Enterococcus faecium E1679]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|304404921|ref|ZP_07386581.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
gi|304345800|gb|EFM11634.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
Length = 788
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 216/400 (54%), Gaps = 39/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +++TGPNTGGKT+ LKT+GL +M+ SGL I + + +++ FD+++A
Sbjct: 317 VPIDVELGNSFSTIIVTGPNTGGKTVSLKTIGLLSLMSMSGLFIPAEDGSQMCVFDAIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS HL I I++ T +SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQNLSTFSSHLTNIIRILNAMTPKSLVLLDELGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
GS + +ATTH+ ELK Y+ + NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HRKGSRI-VATTHYSELKAYAYNRNGVINASMEFDVATLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ +AR E++E + +E E A + +L + L +
Sbjct: 496 RLGLSQQIIDHAR-------GEVSEDDMRVENMIASLEEDRLSAETERQSAESLRRELEQ 548
Query: 639 TRRKILEHCASQRFRKVQK---ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
R K H A Q+ + Q+ + A AR+ V K+ + S R L L
Sbjct: 549 LREK---HAAEQQRFEEQRDKLLLKAQEEARAAVRKAKLEAEQIISDLRKLA------LE 599
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
AS V +++ + ++ P A++ K K P G
Sbjct: 600 EGAS-------VKEHKLIEARRKLDEASPELHKPKPAANRSGKSAKIGP----------G 642
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V S +KG+VI++ S E +VQ+G MK + D+
Sbjct: 643 DEVRVYSLNQKGSVIELTGS--EALVQLGIMKMKVSLDDL 680
>gi|431514071|ref|ZP_19516119.1| MutS2 protein [Enterococcus faecium E1634]
gi|430586327|gb|ELB24588.1| MutS2 protein [Enterococcus faecium E1634]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|404494351|ref|YP_006718457.1| DNA mismatch repair ATPase MutS-2 [Pelobacter carbinolicus DSM
2380]
gi|77546354|gb|ABA89916.1| DNA mismatch repair ATPase MutS-2 [Pelobacter carbinolicus DSM
2380]
Length = 788
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 222/789 (28%), Positives = 355/789 (44%), Gaps = 164/789 (20%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQ--DSLRLLDETNAAIEMQKH 109
E+LRVLE++K+ ++ T GRE TL L ++ Q ++L + E A E Q
Sbjct: 4 ETLRVLEYNKIVRLLAGHTVTEPGREKTLA-LQPLHDPRQVAEALAEVAEMTALFESQGR 62
Query: 110 ---GSC------------------SLDLTGVDLSL-VKSAIR---EVRRASPLRPNEALA 144
G C + DL V SL SA R + ++++PL +A
Sbjct: 63 PPLGGCRELRPALRRLHADGSWLPAEDLLAVVSSLEAASACRGYFDGQQSAPLLAEQASG 122
Query: 145 VVALLQFSETLQLSLRAAIK-----------EDADLYIRFMPLTQMLYQLMDMLIRNENN 193
L LQ +RA+I E DL L + + ++ ++ E+
Sbjct: 123 ----LTVCNALQREIRASIGSHGEILDSASFELGDLRQSARHLRGRIRRKLEDMLHAESF 178
Query: 194 ESLFLE--VSSIHGRLCIRTGADQLS-FKGLLLSSSGIGSVI--EPLSAVPLNDELQQAR 248
+F + V+ +GR + AD KGL+ S G + EP + + N+ELQ R
Sbjct: 179 SGVFQDSIVTERNGRYVVPVRADHRGRVKGLIHDESASGQTLFMEPNAVLEGNNELQALR 238
Query: 249 ASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQD 308
+ + EE +L L+ +++ +E + + D+ A A + G +P
Sbjct: 239 RAEQREEERILRRLSAQVRGQRVALEHNQTLMARFDLRAAAARFGQMCGAVTPQ------ 292
Query: 309 MKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKL 368
L +PV I L A HPLL+
Sbjct: 293 ----LADKPV------------IDLRDARHPLLM-------------------------- 310
Query: 369 YGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKT 428
G + + +E+ V ID+ + + ++LVI+GPNTGGK++ LKT
Sbjct: 311 VGADGS------------------VEVERAVSIDLKLGQDRQILVISGPNTGGKSVALKT 352
Query: 429 VGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQST 488
+GL V+M +SGL I +++ F SV ADIGDEQS+ Q LSTFSGHL ++ I+ +
Sbjct: 353 IGLLVLMVRSGLPIPCRADSRIYLFPSVQADIGDEQSIEQHLSTFSGHLTRLRRIMEECG 412
Query: 489 SQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENA 548
++LVLLDE+G GT+P EG AL M++L+ ++G + T+ATTH +K + D ENA
Sbjct: 413 PETLVLLDELGTGTDPAEGGALAMAMLDHLRDAG-VRTVATTHLNLIKGYAATQDGVENA 471
Query: 549 CMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEM 608
+EFD L+PTY++ +G+PG S A IA RLGLP V+Q A G +
Sbjct: 472 AVEFDPETLQPTYRLHYGIPGASQAFAIARRLGLPATVLQRAEDYLG-----------DG 520
Query: 609 ERFKTQFLEHVHEARHFLMLSRNLHKNL-------LRTRRKILEHCASQRFRKVQKISDA 661
E+ + +E ++ +H L L + + L R+K+LE +Q+ Q + D
Sbjct: 521 EKAGLELMEKINAQQHALELELSEARKLRERARQERARRKKLLEDFEAQK----QALQDK 576
Query: 662 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 721
A + A QL A + + K A+Q T+V Q LTS +Q
Sbjct: 577 A-------RRRADQLVREAERKIKGLLKEARQT---------GTQV-PEQARLTSEVRQV 619
Query: 722 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 781
+ + PA+ VK ++P+ + VG+L+ + + +G V++V+ E+ V
Sbjct: 620 REELRQAPAS-----VKGRGKAPKSVK-----VGELLRIPTLRTEGEVVRVQGDTVEMTV 669
Query: 782 QVGNMKWIM 790
Q ++ M
Sbjct: 670 QGKKLRLAM 678
>gi|430835419|ref|ZP_19453409.1| MutS2 protein [Enterococcus faecium E0680]
gi|430489410|gb|ELA66024.1| MutS2 protein [Enterococcus faecium E0680]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|358464134|ref|ZP_09174101.1| MutS2 family protein [Streptococcus sp. oral taxon 058 str. F0407]
gi|357067310|gb|EHI77434.1| MutS2 family protein [Streptococcus sp. oral taxon 058 str. F0407]
Length = 778
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 216/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LEA + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEAL-RFRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|406580064|ref|ZP_11055285.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|406584557|ref|ZP_11059584.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|406590812|ref|ZP_11065162.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410936712|ref|ZP_11368575.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
gi|404454651|gb|EKA01563.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|404463909|gb|EKA09484.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|404468826|gb|EKA13702.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410734742|gb|EKQ76660.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|423417539|ref|ZP_17394628.1| MutS2 protein [Bacillus cereus BAG3X2-1]
gi|401107818|gb|EJQ15763.1| MutS2 protein [Bacillus cereus BAG3X2-1]
Length = 786
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 220/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A + + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKKEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + L D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|427396578|ref|ZP_18889337.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|431638661|ref|ZP_19523288.1| MutS2 protein [Enterococcus faecium E1904]
gi|447912185|ref|YP_007393597.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
gi|425723248|gb|EKU86139.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|430602140|gb|ELB39719.1| MutS2 protein [Enterococcus faecium E1904]
gi|445187894|gb|AGE29536.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|418010214|ref|ZP_12649997.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
gi|410554421|gb|EKQ28397.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP ++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|425052198|ref|ZP_18455823.1| MutS2 family protein [Enterococcus faecium 506]
gi|403035239|gb|EJY46637.1| MutS2 family protein [Enterococcus faecium 506]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEKVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|293553120|ref|ZP_06673758.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430822931|ref|ZP_19441506.1| MutS2 protein [Enterococcus faecium E0120]
gi|430838514|ref|ZP_19456460.1| MutS2 protein [Enterococcus faecium E0688]
gi|430857731|ref|ZP_19475364.1| MutS2 protein [Enterococcus faecium E1552]
gi|430865610|ref|ZP_19481245.1| MutS2 protein [Enterococcus faecium E1574]
gi|431742713|ref|ZP_19531597.1| MutS2 protein [Enterococcus faecium E2071]
gi|291602711|gb|EFF32925.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430442860|gb|ELA52881.1| MutS2 protein [Enterococcus faecium E0120]
gi|430491756|gb|ELA68208.1| MutS2 protein [Enterococcus faecium E0688]
gi|430546941|gb|ELA86883.1| MutS2 protein [Enterococcus faecium E1552]
gi|430552957|gb|ELA92674.1| MutS2 protein [Enterococcus faecium E1574]
gi|430607682|gb|ELB44983.1| MutS2 protein [Enterococcus faecium E2071]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E RHF+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDL 553
>gi|323341502|ref|ZP_08081743.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 25644]
gi|417974481|ref|ZP_12615299.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 25644]
gi|323091113|gb|EFZ33744.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 25644]
gi|346329142|gb|EGX97443.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 25644]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 285/588 (48%), Gaps = 121/588 (20%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ SSSG IEP V LN+ L+Q + + + + +L L+E + +EIE
Sbjct: 207 AFGGIVHDQSSSGQTLFIEPKEIVELNNRLRQQQIAEKEEIKRILEELSELIAPYTEEIE 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + D +NA+A L D+K + +P+ S RE +YL
Sbjct: 267 NNAKILGKFDFINAKAK-------------LAHDLKAT---QPLIS------RENDVYLR 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+ +HPL L+
Sbjct: 305 QVWHPL----------------------------------------------------LD 312
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V D+ I + + +VITGPNTGGKTI LKT+GL MM +SGL I + E +++ FD
Sbjct: 313 SKKAVRNDVAIGKDYQAIVITGPNTGGKTITLKTLGLVSMMGQSGLFIPAFENSRIGVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ +SLVL DE+GAGT+P EG AL +++
Sbjct: 373 DIFADIGDEQSIEQSLSTFSSHMTNTVEILKSIDERSLVLFDELGAGTDPQEGAALAIAI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+A GS + +ATTH+ ELK Y NA MEFD LKPTY +L G+PGRS+A
Sbjct: 433 LDAVGAKGSYV-VATTHYPELKAYGYERPQTINASMEFDAETLKPTYHLLIGIPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
+I++RLGL +V+ ARQL S ++NE+I ++ + + + E + +L S LH
Sbjct: 492 DISKRLGLDDAIVEAARQLTDQDSQDLNEMIADLVQKRHEAEEEKARFKKYLDESEKLHA 551
Query: 635 NL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
+L +R R ++E RK +I + A K ++++ S +
Sbjct: 552 DLEKGYGTYVRERDNMIETAK----RKANEIIENA-------QKKSEEII-------SEL 593
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
HK Q + SL + +N+ + ++ ++ +E P ++K K R K
Sbjct: 594 HKMKQ-----SGASL----IKENELIDA----RSRLNDLEQPI-----MLKKNKVLQRAK 635
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + + D V V ++G++G + K K E VQ+G +K + D+
Sbjct: 636 KQQEFHENDDVLVKTYGQRGVLTK-RLGKHEWEVQLGILKMKIDEDDL 682
>gi|153940847|ref|YP_001392400.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum F str. Langeland]
gi|384463373|ref|YP_005675968.1| MutS2 family protein [Clostridium botulinum F str. 230613]
gi|189030427|sp|A7GHZ0.1|MUTS2_CLOBL RecName: Full=MutS2 protein
gi|152936743|gb|ABS42241.1| MutS2 family protein [Clostridium botulinum F str. Langeland]
gi|295320390|gb|ADG00768.1| MutS2 family protein [Clostridium botulinum F str. 230613]
Length = 788
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 223/417 (53%), Gaps = 37/417 (8%)
Query: 386 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
+E V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA S
Sbjct: 295 NEGIVDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMS 354
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GL I + E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+
Sbjct: 355 GLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDEL 414
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+
Sbjct: 415 GAGTDPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLR 473
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTY++L G+PG+S+A I++RLGLP ++ AR+ + E+I E + + ++
Sbjct: 474 PTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---ENLQEKSIKA 530
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
+AR L+ N L+ R + ++ +QK+ D A I + A+ +
Sbjct: 531 QEDAR----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIK 578
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
A + + K +QL S K+ + + L ++++ E +K
Sbjct: 579 EAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALK 636
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
++K+ GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 637 NVKE------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|149183061|ref|ZP_01861514.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
gi|148849242|gb|EDL63439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 223/406 (54%), Gaps = 39/406 (9%)
Query: 397 HPV-PIDIFIARKTRV------LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAK 449
HP+ PID +A + +VITGPNTGGKT+ LKT+GL +MA+SGL I + + ++
Sbjct: 310 HPMLPIDEAVANDIELGKDFSSIVITGPNTGGKTVTLKTIGLLTLMAQSGLQIPALDGSE 369
Query: 450 VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTA 509
+ F +V+ADIGDEQS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG A
Sbjct: 370 MGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGKVDHESLVLFDELGAGTDPQEGAA 429
Query: 510 LGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPG 569
L +S+L+ + G+ + +ATTH+ ELK Y+ D NA +EFD L PTYK+L GVPG
Sbjct: 430 LAISILDEVHQRGAKV-VATTHYPELKAYGYNRDGVVNASVEFDVETLSPTYKLLIGVPG 488
Query: 570 RSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLS 629
RS+A I++RLGL V+ A+ G S EI +I +E+ + EA L +
Sbjct: 489 RSNAFEISKRLGLADRVIDRAKSHIGTDSKEIENMIASLEKSRKDAEADYDEAHELLKQA 548
Query: 630 RNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK 689
+HK++ +++++E + K + + A + A Q+ A + V +
Sbjct: 549 EMMHKDM---QKQMMEF-----YEKRDSLYEKAEV-------KASQVVEKAKEEAEGVIR 593
Query: 690 RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
+++R S + +H L ++ A + K K + KR
Sbjct: 594 DLRKMRLEKSAEI-------KEHELIDARKRI------EGAAPELNRSKPKKTNASQKRE 640
Query: 750 ELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
P GD V V SF +KG +++ + SK E VQ+G MK +K +D+
Sbjct: 641 LKP--GDEVKVLSFDQKGHLVE-KVSKNEWQVQMGIMKMKVKESDL 683
>gi|386585395|ref|YP_006081797.1| DNA mismatch repair protein [Streptococcus suis D12]
gi|353737541|gb|AER18549.1| DNA mismatch repair protein [Streptococcus suis D12]
Length = 777
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I++++ SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVQILAEADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|191637667|ref|YP_001986833.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|385819398|ref|YP_005855785.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|385822563|ref|YP_005858905.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|409996521|ref|YP_006750922.1| MutS2 protein [Lactobacillus casei W56]
gi|238693020|sp|B3WC74.1|MUTS2_LACCB RecName: Full=MutS2 protein
gi|190711969|emb|CAQ65975.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|327381725|gb|AEA53201.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|327384890|gb|AEA56364.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|406357533|emb|CCK21803.1| MutS2 protein [Lactobacillus casei W56]
Length = 786
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP ++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|337751036|ref|YP_004645198.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
gi|336302225|gb|AEI45328.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
Length = 794
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 219/397 (55%), Gaps = 32/397 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + K +++TGPNTGGKT+ LKT+GL +MA SG+ + + E +++ FD+++A
Sbjct: 323 VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYA 382
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I I+ + T +SLVLLDE+GAGT+P EG+AL +S+L+
Sbjct: 383 DIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYM 442
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G + +ATTH+ ELK Y NA MEFD L+PTY++L GVPGRS+A IAE
Sbjct: 443 HRMGCRI-VATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAE 501
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++NAR G + +I +E+ Q EA R + L R
Sbjct: 502 RLGLSRSIIENARGQVGEEEQRVESMIATLEQNTIQA-----EA------ERATAQELRR 550
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E ++R R ++ D L+ K+ ++ + ++AR + +LR
Sbjct: 551 EVETLREKLNAERHR-FEEQRD------KLLEKAEREGREAVAKARREAEEVIAELR--- 600
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
L + G + S ++ D P S K + Q P+ K+ E GD V
Sbjct: 601 --RLQREEAGGVKDHKLSELKKKLNDAA--PELRS----KQVSQLPK-KKPETIGPGDEV 651
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V++ G++G ++ V + +E VQ+G +K + D+
Sbjct: 652 LVTNLGQRGHIVDV-VNAQEYTVQLGILKMKVNKADL 687
>gi|223932739|ref|ZP_03624737.1| MutS2 family protein [Streptococcus suis 89/1591]
gi|302023286|ref|ZP_07248497.1| DNA mismatch repair protein [Streptococcus suis 05HAS68]
gi|330832072|ref|YP_004400897.1| DNA mismatch repair protein [Streptococcus suis ST3]
gi|223898572|gb|EEF64935.1| MutS2 family protein [Streptococcus suis 89/1591]
gi|329306295|gb|AEB80711.1| DNA mismatch repair protein [Streptococcus suis ST3]
Length = 777
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I++++ SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVQILAEADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|381183546|ref|ZP_09892273.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
gi|380316562|gb|EIA19954.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
Length = 784
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 219/398 (55%), Gaps = 34/398 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI + +VITGPNTGGKTI LKT+GL MM ++GL I + E + V ++ +FA
Sbjct: 318 VANDILLGDGYSTIVITGPNTGGKTITLKTLGLLTMMTQAGLQIPAQEESLVAIYEDIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMTNIVSILEKLNQNSLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
A+ G+ + +ATTH+ ELK Y+ F NA +EF+ L PTYK+L G+PGRS+A I+
Sbjct: 438 AKRGASV-VATTHYPELKAYGYNRVFATNASVEFNVETLSPTYKLLIGIPGRSNAFEISR 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR L SA++NE+I +E + EA L+++ K LLR
Sbjct: 497 RLGLNEGVIDEARALVDTESADLNEMISSLEEKRNLAEAEYKEASE---LAKDADK-LLR 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPS 697
+K + Q+ + +++ ++ K+++ + + +A +++ + R QLR +
Sbjct: 553 DLQKEIRTYYEQKDKLLERANE----------KASEVVTAAEEEADTIIRELRELQLRGA 602
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
+ G +H L +D A A ++ P K GD
Sbjct: 603 S---------GVKEHEL--------IDAKSRLAGAKPKTIQKKVVHPVKKVAHKFQEGDG 645
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V S G+KG ++ + S E VQ+G +K +K TD+
Sbjct: 646 VRVLSLGQKGVLLD-KVSGSEWNVQIGIIKMKIKETDL 682
>gi|372324775|ref|ZP_09519364.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
gi|366983583|gb|EHN58982.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
Length = 795
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 276/574 (48%), Gaps = 108/574 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGII-Q 282
S SG+ IEP +AV LND L + +L+ +++ + L E K+ N +I +
Sbjct: 218 SQSGLTLYIEPEAAVSLNDHLHDLEIDERREINAILIDISQSL-FPLYEQLKLNNELIGE 276
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LD++ A+A + + P I +SE+E I L A HPLL
Sbjct: 277 LDLIQAKARLANTMDAIKPQI--------------------NSEKE--IDLQAARHPLL- 313
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
PS+ + ++L H
Sbjct: 314 ------------------------------------------PSDAVANDIKLGHD---- 327
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
FI+ L+ITGPNTGGKT+ +KT+GL +MA+SG+ I + + + + FD++FADIGD
Sbjct: 328 -FIS-----LIITGPNTGGKTVLMKTLGLLQLMAQSGIFITADKNSSIYVFDNIFADIGD 381
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQSL QSLSTFS H+ I II+ S + SLVLLDE+GAGT+P EG AL M+++E +E
Sbjct: 382 EQSLEQSLSTFSSHMMNIKEIIADSDTDSLVLLDELGAGTDPSEGAALAMAIVENLSER- 440
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+L + TTH+ ELK F NA MEFD L+PTY++L G+PG+S+AI IA RLG+
Sbjct: 441 KILNLTTTHYPELKVFADQKPFAVNASMEFDLKTLRPTYRLLIGIPGQSNAITIARRLGV 500
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
V++ A E+N +I + F+ Q L+ E + N K L +
Sbjct: 501 DKRVLERAEAYVDPKDQELNNLIQGL-VFQRQDLDQQQEDLQRRLADVNSEKENLDRQSS 559
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK-RAQQLRPSASQS 701
LE K + + DA A +V + S+++ L+ + R+++L+
Sbjct: 560 ELEQS------KAKLLLDAKNEANHIV-------ASTRSESKKLLDQIRSERLKAGQGS- 605
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
GKN+ L Q DK+ + S+ K+ K + KR + +G+ V V+
Sbjct: 606 ------GKNEQELNRIVNQ--FDKLRQ----NDSLEKN-KVLQKAKRAKQFRIGEDVMVT 652
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
S+ + G + + S E +Q+G +K + D+
Sbjct: 653 SYHQPGRITD-KVSNHEWQIQMGILKMTVHENDL 685
>gi|423521564|ref|ZP_17498037.1| MutS2 protein [Bacillus cereus HuA4-10]
gi|401177766|gb|EJQ84953.1| MutS2 protein [Bacillus cereus HuA4-10]
Length = 786
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKSAEHERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S ++ + S L P+E + + + + S ++ + + +L
Sbjct: 63 ----VPLGGI--SDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAENGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILEGHVAQIISLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNDRYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|417992328|ref|ZP_12632689.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
CRF28]
gi|410534012|gb|EKQ08677.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
CRF28]
Length = 786
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP ++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A SLV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NSLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|182626137|ref|ZP_02953897.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|422874800|ref|ZP_16921285.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
gi|177908574|gb|EDT71099.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|380304441|gb|EIA16730.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
Length = 786
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 233/472 (49%), Gaps = 92/472 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP + V LN+E+++ E +L L+ + ++D I+ N I++L
Sbjct: 214 SSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVEL 273
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D + A+A Y GT P + E I L A HPL+
Sbjct: 274 DFIFAKAKYGSDLDGTMPIV----------------------NEEGVIDLMDARHPLI-- 309
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P + VS+ DI
Sbjct: 310 -----------------------------------------PKDKVVSS---------DI 319
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
++ R+ L+ITGPNTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDE
Sbjct: 320 YLGREFSTLLITGPNTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDE 379
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G
Sbjct: 380 QSIEQSLSTFSSHMTNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGC 439
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ ++TTH+ ELK + ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL
Sbjct: 440 RI-MSTTHYSELKGYALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLK 498
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKI 643
V++ A+++ S + ++I + + + ++ ++AR +L + K + R K
Sbjct: 499 DNVIEEAKKVISTESLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK- 552
Query: 644 LEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
++F +++ + D A AR + A+Q+ SA + + K + L
Sbjct: 553 ------EKFERIESVRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>gi|429736042|ref|ZP_19269961.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156327|gb|EKX98960.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
Length = 785
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 221/403 (54%), Gaps = 48/403 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + +L+ITGPNTGGKT+ +KT+GL ++A+SG + ++ +++P + +++A
Sbjct: 314 VPIDIELGKNFSILLITGPNTGGKTVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H + I II ++ L+LLDE+GAGT+P EG AL S++E F
Sbjct: 374 DIGDEQSIEQSLSTFSAHTRNIVRIIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + +ATTH+ LKT Y+ ENA +EFD L+PTY++L G+PG S+A +I+
Sbjct: 434 LQR-DIAVLATTHYAALKTYAYTQTGVENASVEFDLKTLRPTYRLLIGIPGASNAFSISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH----K 634
+LGLP +V A V+ E+E+ K + EAR+ ++ + +
Sbjct: 493 QLGLPQEIVARAEIYVNEEHTHFERVVNELEQEKKDY-----EARNRVLYDKEREITAVE 547
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
LR+ R+ L AA + L+HK AR + ++
Sbjct: 548 ARLRSERETL-----------------AASRQELLHK-----------AREEANNIVREA 579
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVK--RTE 750
R SA +++ K + H + + Q ++++ + +V + +P K R +
Sbjct: 580 RRSAEETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPAHTV----RSTPVGKPVRPD 635
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
GD+V++ S ++GTV+ V+ E+ VQVG ++ I+K +
Sbjct: 636 DIQTGDIVYIDSLAQEGTVLSVQ--GHELAVQVGGLRTIVKMS 676
>gi|389855931|ref|YP_006358174.1| DNA mismatch repair protein [Streptococcus suis ST1]
gi|353739649|gb|AER20656.1| DNA mismatch repair protein [Streptococcus suis ST1]
Length = 777
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTITLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I++++ SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVQILAEADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|322374876|ref|ZP_08049390.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
gi|321280376|gb|EFX57415.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
Length = 778
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALNESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K S ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------SKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|423519234|ref|ZP_17495715.1| MutS2 protein [Bacillus cereus HuA2-4]
gi|401159591|gb|EJQ66974.1| MutS2 protein [Bacillus cereus HuA2-4]
Length = 786
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ D NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNRDQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A Q + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKQEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P+E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQLMDML--------------------IRNE--NNESLFLE------ 199
I + Q+ LY L + IRN+ ES E
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDSGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 200 -------------VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAPKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|30264620|ref|NP_846997.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Ames]
gi|47530091|ref|YP_021440.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187442|ref|YP_030694.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Sterne]
gi|65321918|ref|ZP_00394877.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|165871464|ref|ZP_02216111.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167635560|ref|ZP_02393872.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|167641563|ref|ZP_02399810.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|170688257|ref|ZP_02879467.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|170708684|ref|ZP_02899122.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|177653140|ref|ZP_02935427.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190566985|ref|ZP_03019901.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227817334|ref|YP_002817343.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CDC 684]
gi|229603197|ref|YP_002868830.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A0248]
gi|254686957|ref|ZP_05150815.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CNEVA-9066]
gi|254736658|ref|ZP_05194364.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Western North America USA6153]
gi|254741696|ref|ZP_05199383.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Kruger B]
gi|254754707|ref|ZP_05206742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Vollum]
gi|254757539|ref|ZP_05209566.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Australia 94]
gi|386738447|ref|YP_006211628.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|421639161|ref|ZP_16079754.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
gi|81714920|sp|Q81L40.1|MUTS2_BACAN RecName: Full=MutS2 protein
gi|254766187|sp|C3PAE0.1|MUTS2_BACAA RecName: Full=MutS2 protein
gi|254766188|sp|C3L808.1|MUTS2_BACAC RecName: Full=MutS2 protein
gi|30259278|gb|AAP28483.1| MutS2 family protein [Bacillus anthracis str. Ames]
gi|47505239|gb|AAT33915.1| MutS2 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181369|gb|AAT56745.1| MutS2 family protein [Bacillus anthracis str. Sterne]
gi|164712761|gb|EDR18291.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167510448|gb|EDR85847.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|167528980|gb|EDR91735.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|170126364|gb|EDS95253.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|170667763|gb|EDT18516.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|172081664|gb|EDT66735.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190561976|gb|EDV15945.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002648|gb|ACP12391.1| MutS2 family protein [Bacillus anthracis str. CDC 684]
gi|229267605|gb|ACQ49242.1| MutS2 family protein [Bacillus anthracis str. A0248]
gi|384388299|gb|AFH85960.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|403393580|gb|EJY90823.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
Length = 786
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PT+K+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSNRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIIEFNEERDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L K H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQLANVK----DHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|423395169|ref|ZP_17372370.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|423406028|ref|ZP_17383177.1| MutS2 protein [Bacillus cereus BAG2X1-3]
gi|401655940|gb|EJS73468.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|401660697|gb|EJS78175.1| MutS2 protein [Bacillus cereus BAG2X1-3]
Length = 786
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 221/402 (54%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F +FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKHIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++ Q+LR
Sbjct: 555 -QRQIVEFNEDRDERLLKAQK-------------EGEEKVEAAKKEAEGII----QELRQ 596
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
L V H L ++ A+ +VK KQ VK T +
Sbjct: 597 LRKAQL----VNVKDHEL--------IEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLE-KISDTEWSVQIGILKMKVKESNM 683
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LERHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|423400603|ref|ZP_17377776.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|423457214|ref|ZP_17434011.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|423478688|ref|ZP_17455403.1| MutS2 protein [Bacillus cereus BAG6X1-1]
gi|401148991|gb|EJQ56474.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|401655327|gb|EJS72861.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|402426719|gb|EJV58834.1| MutS2 protein [Bacillus cereus BAG6X1-1]
Length = 786
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 223/400 (55%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A + + + +QLR
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKKEAEGIIRELRQLRK-- 599
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
+Q ++ K+ ++ + K TA V KQ VK T + G
Sbjct: 600 AQLINV----KDHELIEA--------KSRLEGTAPELVK---KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|340751175|ref|ZP_08687998.1| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
gi|340562266|gb|EEO36747.2| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
Length = 778
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 222/420 (52%), Gaps = 41/420 (9%)
Query: 382 NLSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVM 434
N++ EM +S ++ HP VP+ I + L+ITGPNTGGKT+ LKT GL +
Sbjct: 292 NINNREM-LSLVDARHPFIPADKIVPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTL 350
Query: 435 MAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVL 494
MA SG+ I + E+ + +F V+ADIGDEQS+ QSLS+FS HLK + I+ SLVL
Sbjct: 351 MALSGIPIPAHEHTSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILESVNKSSLVL 410
Query: 495 LDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDE 554
LDE+G+GT+P+EG+A M++++ + + TTH+ E+K Y+ + E A MEFD
Sbjct: 411 LDELGSGTDPIEGSAFAMAVID-YLRDRKCKSFITTHYSEVKAHGYNEEGIETASMEFDV 469
Query: 555 VKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQ 614
L PTY++L G+PG S+A+ IA+RLG+ V++ A+ G + +I ++I ++ K
Sbjct: 470 NTLSPTYRLLIGIPGESNALTIAKRLGVSDEVIEKAKSYIGDDNKKIEKMIANIKE-KAD 528
Query: 615 FLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQ 674
LE + + FL + ++ + ++LE ++ I + K+ +
Sbjct: 529 ELEAMKQQVEFLKAAAQRDRDEYAEKLRVLEKEKNE-------------ILKEAYEKADK 575
Query: 675 QLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASS 734
+ ++A +LV K ++ ++ V K+ ++L S Q
Sbjct: 576 MMKEMQAKAVALVEK----IQKEENKKEDVKNVQKSLNMLRSALQDDR------------ 619
Query: 735 SVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
K++++ P++ R VGD V V+S + V+K+ KE + VQ G +K + D
Sbjct: 620 --NKNVEEKPKIARKVDYKVGDKVFVNSLNQFANVLKINGGKETVQVQAGILKLEVSMDD 677
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 163 IKEDA-----DLYIRFMPLTQMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQ 215
IK+DA D+ I L+ + + D L + F E ++ GR + AD
Sbjct: 143 IKDDASLDLRDIRIHKKTLSMNIKRKFDELFDEPSFAKAFQERIITERDGRSVVPVKAD- 201
Query: 216 LSFKGLL------LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVD 269
FKGL+ SSSG IEPLS V LN+++++ + +LL +TE ++ +
Sbjct: 202 --FKGLIKGIEHDRSSSGQTVFIEPLSIVALNNKMRELELKEKEEIRKILLRITEHVRNN 259
Query: 270 LDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI--------------FLPQDMKRSLTH 315
++I+ + I+ LD++NARA Y + PNI F+P D LT
Sbjct: 260 REDIDAVGEAILSLDILNARAVYGIEKNCVIPNINNREMLSLVDARHPFIPADKIVPLTF 319
Query: 316 E 316
E
Sbjct: 320 E 320
>gi|423673678|ref|ZP_17648617.1| MutS2 protein [Bacillus cereus VDM062]
gi|401310543|gb|EJS15859.1| MutS2 protein [Bacillus cereus VDM062]
Length = 786
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A Q + + +QLR +
Sbjct: 555 -QRQIIE-FNDERDEKLLK-----------AQKEGEEKVEAAKQEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVHVKNTAPKQQLRSG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|228941731|ref|ZP_04104278.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974655|ref|ZP_04135221.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981249|ref|ZP_04141549.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|384188627|ref|YP_005574523.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676948|ref|YP_006929319.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|423386045|ref|ZP_17363301.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|423527598|ref|ZP_17504043.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|452201022|ref|YP_007481103.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|228778449|gb|EEM26716.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|228785058|gb|EEM33071.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817943|gb|EEM64021.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942336|gb|AEA18232.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401634696|gb|EJS52459.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|402452967|gb|EJV84777.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|409176077|gb|AFV20382.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452106415|gb|AGG03355.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 786
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS--LVHKRAQQLRP 696
+R+I+E +R K+ K K A+ + Q R LV+ + +L
Sbjct: 555 -QRQIIEFN-DERDEKLLKAQKEGEEKVEAAKKEAEGIIQELRQLRKAQLVNVKDHELIE 612
Query: 697 SASQSLHCT--KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ S+ L T ++ K Q V N TA KQ R
Sbjct: 613 AKSR-LEGTAPELVKKQKVNVKN-------------TAP-------KQQLR--------A 643
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 644 GDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY+L ++ + R+
Sbjct: 119 LETHVAQIVSLYELEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|297588543|ref|ZP_06947186.1| MutS2 protein [Finegoldia magna ATCC 53516]
gi|297573916|gb|EFH92637.1| MutS2 protein [Finegoldia magna ATCC 53516]
Length = 783
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I++ LVITGPNTGGKT+ LKTVGL +MA+SG+ I E ++V FD++F
Sbjct: 316 VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFT 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I++ T SLVL DE+GAGT+P EG AL +++L F
Sbjct: 376 DIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S+ TIATTH+ +LK + + +N +EFD L PTYK+ G+PG+S+A I+
Sbjct: 436 LDK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
RLGL ++ NA+++ + +V+ ++E K Q E
Sbjct: 495 RLGLDDDIINNAKEILSQEDKDFEDVLSDIESEKKQIDE 533
>gi|375090529|ref|ZP_09736843.1| MutS2 family protein [Facklamia languida CCUG 37842]
gi|374565290|gb|EHR36561.1| MutS2 family protein [Facklamia languida CCUG 37842]
Length = 786
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 233/433 (53%), Gaps = 49/433 (11%)
Query: 373 AARKGEKDTNLSPSEMQVSAL-ELAHP-------VPIDIFIARKTRVLVITGPNTGGKTI 424
A K + T S SE Q AL + HP V DI I ++LVITGPNTGGKTI
Sbjct: 283 AYAKANQATKPSFSEDQQIALWQARHPLIDPDKIVANDILIGDSYQLLVITGPNTGGKTI 342
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKT+GL +M +SGL + +++ F+ ++ADIGDEQS+ QSLSTFS H+ I II
Sbjct: 343 ILKTLGLVQVMGQSGLFVPCEAGSQLGVFEGIYADIGDEQSIEQSLSTFSSHMTNIVKII 402
Query: 485 SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
S SLVL DE+G+GT+P EG AL M++L+ + G+ + +ATTH+ ELK +
Sbjct: 403 EASHESSLVLFDELGSGTDPQEGAALAMAILDYLRKVGATV-MATTHYPELKVYAHETPK 461
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV 604
NA MEFD L PTY++L GVPGRS+A +I++RLGL ++ +ARQ S +NE+
Sbjct: 462 TVNASMEFDSESLSPTYRLLIGVPGRSNAFDISKRLGLREDILADARQGISKESQSLNEM 521
Query: 605 IIEMERFKTQF-LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAA 663
+ ++ER + Q L+H A FL S L K+L + L+
Sbjct: 522 VAKLERERRQSELKHA-SAVEFLNRSEQLLKDLRTEYNRYLDQ----------------- 563
Query: 664 IARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ----HVLTSNFQ 719
L+ K+ +Q ++A+ K Q++R L + G+NQ HVL Q
Sbjct: 564 -KEDLMEKAKRQANEKVAEAQKEAEKLLQEIR-----DLQLVQ-GQNQTIKEHVLIDKKQ 616
Query: 720 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 779
D+++ + V + K+ + VGD V V S+ ++G V++ + +K E
Sbjct: 617 --AFDQLKEAENLKKNKV-----LKKAKKAQGFAVGDQVEVLSYQQRGVVVE-QVAKNEY 668
Query: 780 VVQVGNMKWIMKF 792
+VQ+G +K MKF
Sbjct: 669 LVQMGILK--MKF 679
>gi|421487811|ref|ZP_15935209.1| MutS2 family protein [Streptococcus oralis SK304]
gi|400369773|gb|EJP22770.1| MutS2 family protein [Streptococcus oralis SK304]
Length = 778
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 216/391 (55%), Gaps = 46/391 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETSFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 771
+ K+ P VGD + V S+G++GT+ K
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTLTK 648
>gi|373857569|ref|ZP_09600310.1| MutS2 family protein [Bacillus sp. 1NLA3E]
gi|372452701|gb|EHP26171.1| MutS2 family protein [Bacillus sp. 1NLA3E]
Length = 785
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 220/410 (53%), Gaps = 45/410 (10%)
Query: 397 HP-VPIDIFIARKTRV------LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAK 449
HP +PID +A + +VITGPNTGGKT+ LKTVGL +MA++GL + + + ++
Sbjct: 309 HPLIPIDEVVANDITIGIDFSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQVPAFDGSE 368
Query: 450 VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTA 509
+ FD V+ADIGDEQS+ QSLSTFS H+ I +I+ + S SLVL DE+GAGT+P EG A
Sbjct: 369 MAVFDEVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDSNSLVLFDELGAGTDPQEGAA 428
Query: 510 LGMSLL-EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVP 568
L +S+L E + S + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVP
Sbjct: 429 LAISILDEVYKRSAKV--IATTHYPELKAYGYNREGVSNASVEFDVETLSPTYKLLIGVP 486
Query: 569 GRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLML 628
GRS+A I+ +LGL V++NAR A + +I +I +E + Q E L
Sbjct: 487 GRSNAFEISRKLGLDESVIENARSHVSADTNQIENMISSLEASRRQAEIEQEETNELLRN 546
Query: 629 SRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
+ LH NL + + RK Q A A +V K + S+A ++
Sbjct: 547 AEKLHDNLQKEMIAFYD-------RKDQMFEKAEDEALEIVEK-------AKSEAEGVI- 591
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
+ L ++ K V + +D + A+ + K +K+SP +
Sbjct: 592 -----------RDLRKMRIEKQAEVK----EHELIDAKKRLEAAAPT--KTVKRSPVKQA 634
Query: 749 TELPN--VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
T+ + GD V V SFG+KG +I + S VQ+G +K ++ D++
Sbjct: 635 TKKHSFTAGDEVKVVSFGQKGLLIN-KTSDHGWQVQIGILKMKVEEEDLI 683
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 67/331 (20%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGSC 112
+RVLE+DK+ + +SLGR+ L S N +++ +R +ET+ A + + G+
Sbjct: 6 MRVLEFDKIKEQLLEHVSSSLGRDKGQKLLPSSN--FEEVVRWQEETDEAANVFRLKGNI 63
Query: 113 SLD-----------------LTGVDLSLVKSAI---REVRRASPLRPNEALAVVALLQFS 152
L L+ +L V S + R+++R E +++ L++FS
Sbjct: 64 PLGGIFDIRAHIKRAAIGGMLSSNELMQVASTVHVSRQMKRFIEDVAEEDVSIPILVEFS 123
Query: 153 E------TLQLSLRAAIKEDAD-LYIRFMPLTQMLYQL----------MDMLIRNENNES 195
E L+ S++ AI ++ + L L + +QL +D +IR+ N +
Sbjct: 124 EQIIVLAELEQSIKMAIDDNGEVLDGASATLRSLRHQLRSKEARVREKLDSMIRSSNAQK 183
Query: 196 LFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARAS 250
+ + ++ + R + + S G ++ SSSG IEP S V LN+ELQ R
Sbjct: 184 MLSDALITIRNDRFVLPVKQEYRSHYGGIIHDQSSSGQTLFIEPQSIVELNNELQGIRLK 243
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ + +L+ LT + +++ ++ + +LD + A+A Y+ + P
Sbjct: 244 EEQEIQRILIELTAHVAEYQEDLATVVVVLTELDFMFAKARYAKRIKASKP--------- 294
Query: 311 RSLTHEPVTSKVSSSEREWTIYLPKAYHPLL 341
++ H E I+L KA HPL+
Sbjct: 295 -TMNH------------EGRIFLNKARHPLI 312
>gi|291524453|emb|CBK90040.1| MutS2 family protein [Eubacterium rectale DSM 17629]
Length = 792
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 220/404 (54%), Gaps = 28/404 (6%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L+ + VPID+ + + + L+ITGPNTGGKT+ LKTVGL +M ++GLHI +++ +K+
Sbjct: 311 LDAKNVVPIDVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAI 370
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F+ VFADIGDEQS+ QSLSTFS H+ I I+ ++ +SL L DE+ +GT+P EG AL +
Sbjct: 371 FEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAI 430
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L + G+ +T+ATTH+ ELK S D ENAC EF+ L PTY++L G+PG+S+
Sbjct: 431 SILNRLHQYGA-ITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSN 489
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ +LGL ++++A+ + ++I +E + Q +E L N
Sbjct: 490 AFAISSKLGLDENIIEDAKSRINDNDLDFEDLIASLES-QRQTIEKEQ-------LEINS 541
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+K + +K LE ++ ++ K D ++ ++ ++ A+ L K +
Sbjct: 542 YKAEIEKLKKQLE----EKNERIDKSKD------KILREANEEAYKILQDAKELADKTIR 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+++ K + L DK + + + K ++P+ R
Sbjct: 592 NFNKYGQGQAPMSQMEKERSALRDKMN----DKEKKLSDIKKNTAKANHKAPKKLR---- 643
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+GD V V S KGTV + +K ++ VQ+G ++ ++ D+V
Sbjct: 644 -IGDSVLVLSLNLKGTVHTLPNAKGDLYVQMGILRSLVNINDLV 686
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 205 GRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ + + G++ S GS IEP++ V LN+EL++ + E +L A
Sbjct: 194 GRYCLPVKAEAKGNVPGMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAA 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
L++K+ ++ +E+ + +LD + A+A + S+ G +P
Sbjct: 254 LSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAP 293
>gi|162661179|gb|EDQ48693.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 866
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 216/406 (53%), Gaps = 52/406 (12%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
+++ VPID+ + +++TGPNTGGKT+ LKT+GL +MA SGL + + E +++
Sbjct: 502 IDMEKVVPIDVELGNSYSSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPAEEGSQLCV 561
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
FD+++ADIGDEQS+ QSLSTFS H+ I I++ T +SLVLLDE+GAGT+P EG+AL +
Sbjct: 562 FDAIYADIGDEQSIEQSLSTFSSHMTNIIRILNHMTPKSLVLLDEVGAGTDPAEGSALAI 621
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+LE G + +ATTH+ ELK Y NA MEFD L PTY++L GVPGRS+
Sbjct: 622 SILEHIHSLGCRM-VATTHYSELKAYAYERKGVINASMEFDVNTLSPTYRLLVGVPGRSN 680
Query: 573 AINIAERLGLPGIVVQNARQ---------LYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
A IAERLGLP +++ AR + AS E N + E ER K + L E
Sbjct: 681 AFAIAERLGLPQVILDYARGEVKEEDQRVEHMIASLEENRLGAESEREKAEKLRQEMEQ- 739
Query: 624 HFLMLSRNLHKNLLRTR-RKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
LR+R ++ LE QR R ++K A + + A+Q+
Sbjct: 740 -------------LRSRHQQELEKLEEQRDRLIEKARGEAKEVIAKARREAEQIIAD--- 783
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
LR A + K +H L + +Q +D+ E + K
Sbjct: 784 -----------LRQLAKEEGASVK----EHKLIAARRQ--LDEAEPQQRKKGAAKPKAKA 826
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+++ P GD V V S +KG V+++ +K E VVQ+G MK
Sbjct: 827 PRQIE----P--GDEVMVYSLNQKGHVVELSGAK-EAVVQLGIMKM 865
>gi|260887326|ref|ZP_05898589.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|330838921|ref|YP_004413501.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
gi|260862962|gb|EEX77462.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|329746685|gb|AEC00042.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
Length = 791
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 219/404 (54%), Gaps = 34/404 (8%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
++ A VPIDI + R+L+ITGPNTGGKT+ LKT+GL +M +SG +I ++ +++
Sbjct: 308 IDAAKVVPIDIALGEAYRMLLITGPNTGGKTVSLKTIGLFALMVQSGCYIPAAAGSEISV 367
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
+ +V+ IGDEQS+ QSLSTFS H+ + ++ L+LLDEIGAGT+P EG AL M
Sbjct: 368 YTNVYTVIGDEQSIEQSLSTFSAHMSHLVKLLECVEGTDLLLLDEIGAGTDPEEGAALAM 427
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
++LE F GS TI TTH+ ELKT ++ + ENAC+EFD L+PTY++L G+PG S+
Sbjct: 428 AILEQFLARGSS-TIVTTHYSELKTFAFTREGIENACVEFDVETLRPTYRLLTGMPGASN 486
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ RLGL + A+Q A A+ +V+ ++E K ++E R+ ++ R
Sbjct: 487 AFAISRRLGLSEAAILRAQQFIKADHAQFEKVVNQLESEKL-----MYEQRNADIMERQ- 540
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
++V K+ + + + + +Q+ A Q + + +R
Sbjct: 541 --------------------QRVAKLEEKTQALKDEIREKKEQMLKKARQESANLVRRT- 579
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTE 750
R A + + K + + S + Q +K++ A S + + K +
Sbjct: 580 --RREAEEIIKSLKAQFDDLGIESRRRAMQEAREKLQEAAERSRTGLLPGKAYKEKIDMQ 637
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
VGD+V+V +K TV+K++ + I VQ+G++K +K D
Sbjct: 638 KLAVGDVVYVRKLDQKATVLKIQGAN--IEVQLGSLKTYVKAGD 679
>gi|332298293|ref|YP_004440215.1| MutS2 protein [Treponema brennaborense DSM 12168]
gi|332181396|gb|AEE17084.1| MutS2 protein [Treponema brennaborense DSM 12168]
Length = 870
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 234/470 (49%), Gaps = 63/470 (13%)
Query: 373 AARKG--EKDTNLSPSEMQVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTI 424
AAR G +K + +E Q ++ HP VPID+ + RVL+ITGPNTGGKT+
Sbjct: 291 AARWGIEQKAVFAADTEAQPVLVQARHPLLGAKAVPIDLAFPKDCRVLIITGPNTGGKTV 350
Query: 425 CLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNII 484
LKTV L ++ +SG + + E ++P VFADIGDEQSL QSLSTFSGH+K I + +
Sbjct: 351 TLKTVALFTLLNQSGFPVPAKEGTRLPVRTGVFADIGDEQSLDQSLSTFSGHMKNIADTL 410
Query: 485 SQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDF 544
+++ S SLVLLDE+G+GT+P EG A+ M++L+A E S + + TTHHG LK Y++
Sbjct: 411 TRADSDSLVLLDELGSGTDPQEGGAIAMAVLDALIEKRSFVLV-TTHHGVLKNYGYTHRA 469
Query: 545 FENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEV 604
NA EFDE L PTY+I G+PG S A++IA R GLP VV A + A+++ +
Sbjct: 470 CVNASAEFDETTLAPTYRIRTGIPGESRALDIARRNGLPPEVVDKAASYLISEQADVSAM 529
Query: 605 I--------------------------------IEMERFKTQFLEHVHEA----RHFLML 628
I ++ R K E HE R FL
Sbjct: 530 IRGLTAKHEAADLLEKQLRQDQQRLREQRRAADLKSLRLKQTEWELAHEGNRETRRFLEE 589
Query: 629 SRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSA--QQLCPSASQARSL 686
SR + +NL+R R+ ++ R V++ +A+++ + + S ++ ++
Sbjct: 590 SRKMLENLVRELRE--GEITREKTRAVKRF--ITELAQNVQERGDLLDEQEESLAREQAA 645
Query: 687 VHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRV 746
+R +Q +A++ H K L + A + D + P
Sbjct: 646 FTEREKQYETAAAKPPHTAK-----KRLKNADAFAAAKSAAQDGQAFGTRTDDSRSLPGF 700
Query: 747 KRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+ G V S ++GT+++ + K +VQVG+MK +K D+
Sbjct: 701 E------AGTEVLTGSANRRGTLLR-KSGKNSWIVQVGSMKLTLKEKDLT 743
>gi|228910376|ref|ZP_04074191.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
gi|228849142|gb|EEM93981.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
Length = 786
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS--LVHKRAQQLRP 696
+R+I+E +R K+ K K A+ + Q R LV+ + +L
Sbjct: 555 -QRQIIEFN-DERDEKLLKAQKEGEEKVEAAKKEAEGIIQELRQLRKAQLVNVKDHELIE 612
Query: 697 SASQSLHCT--KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ S+ L T ++ K Q V N TA KQ R
Sbjct: 613 AKSR-LEGTAPELVKKQKVNVKN-------------TAP-------KQQLR--------A 643
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 644 GDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
Length = 781
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 220/399 (55%), Gaps = 39/399 (9%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VPID+ I L+ITGPNTGGKT+ LKTVGL +MA++ L I + E + V
Sbjct: 304 HPLLPGKVVPIDVAIGGDYTTLIITGPNTGGKTVSLKTVGLITLMAQTALFIPADEGSTV 363
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
FD VF DIGD+QS+ SLSTFS L I +I+++ TS SLVLLDEIG+GT+P+EG AL
Sbjct: 364 NVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDILNRVTSNSLVLLDEIGSGTDPIEGAAL 423
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
+S+L E ++T ATTH+ ELK N+ NA +EF+ L PTYK+ G PG+
Sbjct: 424 AISILSHLTEK-EVMTFATTHYSELKYYAMENNRVMNASVEFNVNTLSPTYKLEIGTPGK 482
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR 630
S+A I++RLGL +++ A+ L + N+++ ++E K Q EA+
Sbjct: 483 SNAFEISKRLGLSEEILKKAKDLISDDTKNFNKILEQIEDDKYQM-----EAK------- 530
Query: 631 NLHKNLLRTRRKILEHCASQRFR-KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHK 689
+K + RR+I + R K ++I +A A + A ++ A++ + K
Sbjct: 531 --NKEIEAYRREI--QSIKDKLRNKSKEIDEAKAEIIKKAEERANEILDKANKESQAMLK 586
Query: 690 RAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT 749
A++ S++ + + ++ + + + F+ + +++ E + + K +P
Sbjct: 587 EAKR-----SKNANTRDIDRSLNKIRNKFKDSYIEREEDRFGQTRA-----KDAP----D 632
Query: 750 ELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
EL VGD++ V+ +K VI+ SK I VQ+G +K
Sbjct: 633 ELK-VGDMIIVAGLNEKAEVIEGPDSKGNIKVQMGILKM 670
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTY-QDSLRLLDETNAAIEMQKHG 110
+SL VLE++K+ +S AR+SL ++ L S + Y +D L E A+
Sbjct: 4 KSLEVLEYNKILEKLSKMARSSLVKKQILDLKPSTDVGYLEDEL----EKTGAMAKVIAR 59
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQ 156
+ ++D+ G L K + +RR L P++ L ++ LL+ SE L+
Sbjct: 60 NGNIDIFG--LYDFKEIVGYIRRNGILEPSDLLKILGLLRVSEYLK 103
>gi|116628455|ref|YP_821074.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus LMD-9]
gi|122266950|sp|Q03IU4.1|MUTS2_STRTD RecName: Full=MutS2 protein
gi|116101732|gb|ABJ66878.1| DNA structure-specific ATPase involved in suppression of
recombination, MutS family [Streptococcus thermophilus
LMD-9]
Length = 783
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|291527503|emb|CBK93089.1| MutS2 family protein [Eubacterium rectale M104/1]
Length = 792
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 219/404 (54%), Gaps = 28/404 (6%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L+ VPID+ + + + L+ITGPNTGGKT+ LKTVGL +M ++GLHI +++ +K+
Sbjct: 311 LDAKKVVPIDVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAI 370
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F+ VFADIGDEQS+ QSLSTFS H+ I I+ ++ +SL L DE+ +GT+P EG AL +
Sbjct: 371 FEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAI 430
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L + G+ +T+ATTH+ ELK S D ENAC EF+ L PTY++L G+PG+S+
Sbjct: 431 SILNRLHQYGA-ITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSN 489
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ +LGL ++++A+ + ++I +E + Q +E L N
Sbjct: 490 AFAISSKLGLDENIIEDAKSRINDNDLDFEDLIASLES-QRQTIEKEQ-------LEINS 541
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+K + +K LE ++ ++ K D ++ ++ ++ A+ L K +
Sbjct: 542 YKAEIEKLKKQLE----EKNERIDKSKD------KILREANEEAYKILQDAKELADKTIR 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+++ K + L DK + + + K ++P+ R
Sbjct: 592 NFNKYGQGQAPMSQMEKERSALRDKMN----DKEKKLSDIKKNTAKANHKAPKKLR---- 643
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+GD V V S KGTV + +K ++ VQ+G ++ ++ D+V
Sbjct: 644 -IGDSVLVLSLNLKGTVHTLPNAKGDLYVQMGILRSLVNINDLV 686
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 205 GRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ + + G++ S GS IEP++ V LN+EL++ + E +L A
Sbjct: 194 GRYCLPVKAEAKGNVPGMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAA 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L++K+ ++ +E+ + +LD + A+A + S+ G +P+
Sbjct: 254 LSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDF 295
>gi|386345470|ref|YP_006041634.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387910457|ref|YP_006340763.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
gi|339278931|emb|CCC20679.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387575392|gb|AFJ84098.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
Length = 783
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|335429528|ref|ZP_08556426.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
gi|334889538|gb|EGM27823.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
Length = 780
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 225/391 (57%), Gaps = 40/391 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + ++ ++ITGPNTGGKT+ LKT+GL +M ++GL + ++E++K+ FD+VFA
Sbjct: 315 VPNDIMLGQEFTSIIITGPNTGGKTVTLKTLGLLTLMMQAGLLVPANEHSKLAVFDNVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I NI+ T SLVLLDE+GAGT+P EG AL MSLL+ F
Sbjct: 375 DIGDEQSIEQSLSTFSSHMKTIINIVDNITINSLVLLDELGAGTDPKEGAALAMSLLDYF 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ GS + IATTH+ ELKT Y+ + NA +EF+ LKPTYK+L G+PGRS+A I++
Sbjct: 435 RKRGSRI-IATTHYPELKTYAYNTEKVINASVEFNVETLKPTYKLLIGIPGRSNAFEISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V+++AR+ ++ +I ++E Q + + E F
Sbjct: 494 RLGLNELVIEDAREKVDFEQTDVANLISQLETKGLQLEKLIDENEQF------------- 540
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+Q+ ++ + + ++ + + +++ A Q + + K A Q
Sbjct: 541 ----------NQKLKQEKNTYQSKSLD---IDRQKEKMIEKAKQEAASIIKSANQEAKEV 587
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT--ELPNVGD 756
L K G +N+++ V ++ +S K KQ +V +T +L GD
Sbjct: 588 INELKELKKGA-----KTNYKEHEVINIKSKLDSS----KYYKQKEKVSKTSHQLKE-GD 637
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
V V +F + G +I+ + +K+E +VQ+G +K
Sbjct: 638 QVMVLTFNRSGILIE-QVNKKEWLVQIGALK 667
>gi|392423579|ref|YP_006464573.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
gi|391353542|gb|AFM39241.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
Length = 788
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 213/414 (51%), Gaps = 39/414 (9%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
Q+ ++ HP VP+ + + LVITGPNTGGKT+ LK +GL M +SGLHI
Sbjct: 300 QLKLIQARHPLIGGKVVPLSVELGIGFDTLVITGPNTGGKTVALKVIGLMAAMTQSGLHI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ + + F +FADIGDEQS+ QSLSTFSGH+K I II +S +SLVLLDE+GAGT
Sbjct: 360 PAESNSSMGVFSQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSDERSLVLLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL M +L G T++TTH+G LKT Y +NA +EFD L+PTY+
Sbjct: 420 DPTEGAALAMGILAELHSRGC-RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGL V++ A N + E E +E++ E
Sbjct: 479 LLIGIPGKSNAFTIARRLGLSEGVLERA-----------NTFVTEREMQVADLIENLGET 527
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS- 681
+ L K +++ R+ +E K Q++ + + +L + A +L A
Sbjct: 528 HREI----ELEKEKVQSGRQAVEQQTKALEEKSQRLDEDYDLLMTLAKEEAAELVREAKR 583
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +++ + + L+ Q K + +++ + K ++ ++
Sbjct: 584 EAEAIIAELKEALKKETKQQQDIEKARQGFRRISNKLDKGRAVKQTGSGLSADQIM---- 639
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+G V ++ +KG V+K+ + E++VQ G MK ++ ++
Sbjct: 640 ------------LGQTVLMTKLRQKGQVLKLPNASGEVLVQAGIMKVMVPLAEL 681
>gi|317050976|ref|YP_004112092.1| MutS2 family protein [Desulfurispirillum indicum S5]
gi|316946060|gb|ADU65536.1| MutS2 family protein [Desulfurispirillum indicum S5]
Length = 785
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 166/267 (62%), Gaps = 13/267 (4%)
Query: 381 TNLSPSEMQVSALE------LAHPVPIDIFIA-RKTRVLVITGPNTGGKTICLKTVGLAV 433
T L PS+ + L L +PVP+D ++ +L+ITGPNTGGKTI LK++GLAV
Sbjct: 293 TFLEPSQHKGCCLPRLRHPLLKNPVPVDAYLGGEHPSMLLITGPNTGGKTIALKSLGLAV 352
Query: 434 MMAKSGLHILSSEYAK-VPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSL 492
+ SG+ +L SE + +FDSVFADIGDEQS+ Q+LSTFSGH+ I ++ +T +SL
Sbjct: 353 LSHNSGMPVLCSEVESFMGYFDSVFADIGDEQSIEQNLSTFSGHIVNIAHVAGNATERSL 412
Query: 493 VLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEF 552
VLLDE+G+GT+P EG AL + +LE F + +ATTHH +K ++ NACMEF
Sbjct: 413 VLLDELGSGTDPEEGGALAVGILEYFRQR-KCSVVATTHHNAVKRYAFTTGGIGNACMEF 471
Query: 553 DEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
D L+PTY+IL+G G SSA+ IA+R GLPG +++ +R + S E + I +ER
Sbjct: 472 DLQTLQPTYRILYGYQGESSALAIAQRHGLPGEILETSRNFLESQSGEEAKTIAALERKL 531
Query: 613 TQFLEHVHEARHFLMLSRNLHKNLLRT 639
+F + F SR L K LRT
Sbjct: 532 EKF---ARRSDQFERESREL-KEKLRT 554
>gi|228967649|ref|ZP_04128670.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402563934|ref|YP_006606658.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
gi|228792025|gb|EEM39606.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401792586|gb|AFQ18625.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
Length = 786
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS--LVHKRAQQLRP 696
+R+I+E +R K+ K K A+ + Q R LV+ + +L
Sbjct: 555 -QRQIIEFN-DERDEKLLKAQKEGEEKVEAAKKEAEGIIQELRQLRKAQLVNVKDHELIE 612
Query: 697 SASQSLHCT--KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ S+ L T ++ K Q V N TA KQ R
Sbjct: 613 AKSR-LEGTAPELVKKQKVNVKN-------------TAP-------KQQLR--------A 643
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 644 GDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V++D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEVDIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|421224287|ref|ZP_15681033.1| mutS2 protein [Streptococcus pneumoniae 2070768]
gi|395591623|gb|EJG51918.1| mutS2 protein [Streptococcus pneumoniae 2070768]
Length = 689
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|417982883|ref|ZP_12623531.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|417995567|ref|ZP_12635859.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|417998549|ref|ZP_12638768.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|418001406|ref|ZP_12641551.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|418014595|ref|ZP_12654190.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
gi|410529338|gb|EKQ04156.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|410537240|gb|EKQ11818.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|410540964|gb|EKQ15468.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|410546729|gb|EKQ20974.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|410553224|gb|EKQ27228.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
Length = 786
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP ++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A +LV K A++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDKA---NTLVDK-----------AQTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|75762595|ref|ZP_00742445.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899706|ref|YP_002448117.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus G9842]
gi|228903069|ref|ZP_04067206.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|423358361|ref|ZP_17335864.1| MutS2 protein [Bacillus cereus VD022]
gi|423560939|ref|ZP_17537215.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|434377706|ref|YP_006612350.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
gi|226723045|sp|B7IJV1.1|MUTS2_BACC2 RecName: Full=MutS2 protein
gi|74489915|gb|EAO53281.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218542145|gb|ACK94539.1| MutS2 family protein [Bacillus cereus G9842]
gi|228856555|gb|EEN01078.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|401086048|gb|EJP94280.1| MutS2 protein [Bacillus cereus VD022]
gi|401202784|gb|EJR09634.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|401876263|gb|AFQ28430.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
Length = 786
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + +EA S LH+ L
Sbjct: 497 RLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARS--LVHKRAQQLRP 696
+R+I+E +R K+ K K A+ + Q R LV+ + +L
Sbjct: 555 -QRQIIEFN-DERDEKLLKAQKEGEEKVEAAKKEAEGIIQELRQLRKAQLVNVKDHELIE 612
Query: 697 SASQSLHCT--KVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
+ S+ L T ++ K Q V N TA KQ R
Sbjct: 613 AKSR-LEGTAPELVKKQKVNVKN-------------TAP-------KQQLR--------A 643
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 644 GDEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQK-HGS 111
+LRVLE++K+ + +SLGR+ + S + +++ + + D T+ A ++ + GS
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTD--FEEIVEMQDTTDEAAKVIRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ ++S ++ + S L PNE L + + S ++ + + +L I
Sbjct: 63 APLG----GITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPI 118
Query: 172 RFMPLTQM--LYQL---------------------------------------MDMLIRN 190
+ Q+ LY L ++ + R+
Sbjct: 119 LETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRS 178
Query: 191 ENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQ 245
N + + + V+ + R I + G ++ S+SG IEP V LN+ LQ
Sbjct: 179 SNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQ 238
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+AR + E +LL LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 239 EARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKP 294
>gi|418193090|ref|ZP_12829586.1| mutS2 family protein [Streptococcus pneumoniae GA47439]
gi|353861237|gb|EHE41176.1| mutS2 family protein [Streptococcus pneumoniae GA47439]
Length = 778
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q S ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDS-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRVLKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|55821734|ref|YP_140176.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|81676665|sp|Q5M2P5.1|MUTS2_STRT2 RecName: Full=MutS2 protein
gi|55737719|gb|AAV61361.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
Length = 783
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|153932430|ref|YP_001385445.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936995|ref|YP_001388852.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. Hall]
gi|229486367|sp|A7FY72.1|MUTS2_CLOB1 RecName: Full=MutS2 protein
gi|152928474|gb|ABS33974.1| MutS2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152932909|gb|ABS38408.1| MutS2 family protein [Clostridium botulinum A str. Hall]
Length = 788
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGTKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|417934437|ref|ZP_12577757.1| MutS2 family protein [Streptococcus mitis bv. 2 str. F0392]
gi|340771007|gb|EGR93522.1| MutS2 family protein [Streptococcus mitis bv. 2 str. F0392]
Length = 778
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 216/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + +++ F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRIGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALNESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K ++ ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------ADLKKMAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|121534235|ref|ZP_01666060.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
gi|121307338|gb|EAX48255.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
Length = 789
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 219/390 (56%), Gaps = 34/390 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +L+ITGPNTGGKT+ LKTVGL +M ++GL I + +++P F +VFA
Sbjct: 320 VPIDVRLGEDFSILLITGPNTGGKTVTLKTVGLFALMTQAGLFIPAGSGSEMPVFRNVFA 379
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ + I+++ ++ LVL+DEIGAGT+P EG AL M++LE
Sbjct: 380 DIGDEQSIEQSLSTFSAHMTNLVKILAKVSAHDLVLIDEIGAGTDPGEGAALAMAILEYL 439
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+G+ TIATTH+ ELKT YS ENA +EFD L+PTY++ G+PG S+A I+
Sbjct: 440 HSAGA-RTIATTHYSELKTFAYSRHGIENASVEFDIHTLRPTYRLQIGIPGSSNAFAISR 498
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ ARQ A+ +++ +E+ K + + L +
Sbjct: 499 RLGLPQELIDRARQFLDKDYAQFEKILAVLEQEKKE-------YEERRRRAEELEAEVAA 551
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R+K+ + A+ R+ + I A A S+V ++ + QA ++ + +Q ++
Sbjct: 552 LRQKLAQEEAALLARRREIIDKAQEEAMSIVRQARR-------QAEEVIARLKEQFSVAS 604
Query: 699 SQSLHCTKVGKNQHVLTSNFQ-QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
+ + Q + + Q Q + ++ HP ++ K +P L G
Sbjct: 605 DKE-------RQQAIADARRQLQRQMAELHHPELDAAE-----KTAP----PALLTPGST 648
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
V+V++ +KG+V+ ++ E VVQ+G +K
Sbjct: 649 VYVTTLRQKGSVLAIKDG--EAVVQLGVLK 676
>gi|55823654|ref|YP_142095.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
gi|81676513|sp|Q5LY40.1|MUTS2_STRT1 RecName: Full=MutS2 protein
gi|55739639|gb|AAV63280.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 783
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|336114602|ref|YP_004569369.1| MutS2 family protein [Bacillus coagulans 2-6]
gi|335368032|gb|AEH53983.1| MutS2 family protein [Bacillus coagulans 2-6]
Length = 741
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 159/245 (64%), Gaps = 1/245 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI + + +VITGPNTGGKTI LKT+GL +MA++GL I + + +++ F VFA
Sbjct: 275 VPNDITLGQDYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEMAVFKEVFA 334
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ + QSLVL DE+GAGT+P EG AL +S+L+
Sbjct: 335 DIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAALAISILDEV 394
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ + +ATTH+ ELK Y+ + NA +EFD L PTY++L GVPGRS+A I+
Sbjct: 395 YKRGARV-VATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRSNAFEISR 453
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ +A+ L GA + E+ +I +E + + + EA+ L + LH +L +
Sbjct: 454 RLGLSPSVIAHAQSLIGADTNEVENMIAALESARREAEKERQEAQKLLEDAEGLHHDLQK 513
Query: 639 TRRKI 643
R+
Sbjct: 514 QMRQF 518
>gi|306828937|ref|ZP_07462129.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
gi|304429115|gb|EFM32203.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
Length = 778
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 209/391 (53%), Gaps = 50/391 (12%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+S+ SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILSKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSA--SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+H ++ QL+P K+ + L+ N
Sbjct: 586 ------LHSKS-QLKPHEIIEAKAELKKLAPEKVYLSKN--------------------- 617
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
K + K+ P VGD + V S+G++GT+
Sbjct: 618 --KVLQKAKKKRAPRVGDDIVVISYGQRGTL 646
>gi|294101715|ref|YP_003553573.1| MutS2 family protein [Aminobacterium colombiense DSM 12261]
gi|293616695|gb|ADE56849.1| MutS2 family protein [Aminobacterium colombiense DSM 12261]
Length = 783
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 205/399 (51%), Gaps = 38/399 (9%)
Query: 394 ELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEY 447
+L HP +P+ I R VLV+TGPNTGGKT+ LKTVG+ +++A G + + E
Sbjct: 305 DLLHPLLGEKGIPLTIECGRSFHVLVVTGPNTGGKTVALKTVGMGIILAWCGFPLPAKEG 364
Query: 448 AKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEG 507
V D+VFADIGDEQS+ Q+LSTFS HLK I +I+S++T SLVLLDE+GAGT+P EG
Sbjct: 365 TVVGNLDNVFADIGDEQSIEQNLSTFSAHLKNIIHILSEATRSSLVLLDELGAGTDPQEG 424
Query: 508 TALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGV 567
ALG++L++ E S +T+ATTHH +K+ + E A MEF+ L PTY +L G+
Sbjct: 425 AALGIALIDTLREKKS-ITLATTHHNPIKSYALTTPHVETASMEFNVETLAPTYHLLMGI 483
Query: 568 PGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM 627
PGRS+AI IAER G+P V+Q AR + EVI ++ K L H E
Sbjct: 484 PGRSNAIYIAERYGMPSEVLQKARATLKEQEISMEEVIADLHERKA-LLNHEWEKMEEQR 542
Query: 628 LSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
+L + K LE QR + + K AA L + ++R ++
Sbjct: 543 QKADLLSKEYSEKMKALEE---QREKIIAKAEQQAATV----------LASAEEESRRMI 589
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
+ R ++LH GK +++ + E +K +K R
Sbjct: 590 RDLDEAARSVVQRNLH----GKRENIREK--------RKELEQKEEKRFIKKMKDEKRNL 637
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNM 786
+GD V ++ GT++ ++ +K E+ M
Sbjct: 638 -----EIGDAVSIAGTSITGTILALKGNKAEVQAGAARM 671
>gi|269837731|ref|YP_003319959.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
gi|269786994|gb|ACZ39137.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
Length = 800
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ I R+LV+TGPNTGGKT+ LKTVGL +MA++GL I +++ + + F +V+A
Sbjct: 329 VPIDVRIGETYRILVVTGPNTGGKTVALKTVGLLTLMAQTGLFIPAADGSALSVFSAVYA 388
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ +I ++ + + SLVLLDEIGAGT+P EG+AL +++ A
Sbjct: 389 DIGDEQSIEQSLSTFSAHVTKIIAMLRSADADSLVLLDEIGAGTDPQEGSALARAIISAL 448
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G ++ + TTH+ ELK Y + ENA +EFD L PTY++L GV G+S+A+ IAE
Sbjct: 449 LERG-VIAMVTTHYSELKAFAYVTEGTENASVEFDLRNLSPTYRLLLGVAGQSNALAIAE 507
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
RLG+P V++ AR + +E++ E+ R +
Sbjct: 508 RLGMPREVIEAARSYLSPGTERADELLTEIRRRR 541
>gi|401684068|ref|ZP_10815951.1| MutS2 family protein [Streptococcus sp. BS35b]
gi|418974669|ref|ZP_13522578.1| MutS2 family protein [Streptococcus oralis SK1074]
gi|383348040|gb|EID25999.1| MutS2 family protein [Streptococcus oralis SK1074]
gi|400186373|gb|EJO20585.1| MutS2 family protein [Streptococcus sp. BS35b]
Length = 778
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTFESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|168181815|ref|ZP_02616479.1| MutS2 family protein [Clostridium botulinum Bf]
gi|237796578|ref|YP_002864130.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum Ba4 str. 657]
gi|259511153|sp|C3KTI4.1|MUTS2_CLOB6 RecName: Full=MutS2 protein
gi|182674997|gb|EDT86958.1| MutS2 family protein [Clostridium botulinum Bf]
gi|229262891|gb|ACQ53924.1| MutS2 family protein [Clostridium botulinum Ba4 str. 657]
Length = 788
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGAKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|401565428|ref|ZP_10806266.1| MutS2 family protein [Selenomonas sp. FOBRC6]
gi|400187177|gb|EJO21373.1| MutS2 family protein [Selenomonas sp. FOBRC6]
Length = 785
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 219/401 (54%), Gaps = 44/401 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + + +L+ITGPNTGGKT+ +KT+GL ++A+SG + ++ +++P + +++A
Sbjct: 314 VPIDIELGKNFSILLITGPNTGGKTVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H + I II ++ L+LLDE+GAGT+P EG AL S++E F
Sbjct: 374 DIGDEQSIEQSLSTFSAHTRNIVRIIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + +ATTH+ LKT Y+ ENA +EFD L+PTY++L G+PG S+A +I+
Sbjct: 434 LQR-DIAVLATTHYAALKTYAYTQTGVENASVEFDLKTLRPTYRLLIGIPGASNAFSISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLH----K 634
+LGLP +V A V+ E+E+ K + E R+ ++ + +
Sbjct: 493 QLGLPQEIVARAEIYVNEEHTHFERVVNELEQEKKDY-----EIRNRVLYDKEREITAVE 547
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
LR+ R+ L AA + L+HK AR + ++
Sbjct: 548 ARLRSERETL-----------------AASRQELLHK-----------AREEANNIVREA 579
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK--RTELP 752
R SA +++ K + H + ++ + + + + + ++ +P K R +
Sbjct: 580 RRSAEETIKSLKDQFDDHGVKE--RRKAIQEARNRLDEAYVPARTVRSTPVGKPMRPDDI 637
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFT 793
GD+V++ S ++GTV+ V+ E+ VQVG ++ I+K +
Sbjct: 638 QTGDIVYIDSLAQEGTVLSVQ--GHELAVQVGGLRTIVKMS 676
>gi|445382616|ref|ZP_21427302.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
gi|445395409|ref|ZP_21429035.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748486|gb|ELW73452.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748654|gb|ELW73613.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
Length = 783
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + +++ F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRIAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|417939821|ref|ZP_12583109.1| MutS2 family protein [Streptococcus oralis SK313]
gi|343388702|gb|EGV01287.1| MutS2 family protein [Streptococcus oralis SK313]
Length = 712
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTTIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|418018649|ref|ZP_12658205.1| DNA mismatch repair protein [Streptococcus salivarius M18]
gi|345527498|gb|EGX30809.1| DNA mismatch repair protein [Streptococcus salivarius M18]
Length = 782
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 153/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
LA+PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LANPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILTDKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|238925261|ref|YP_002938778.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
gi|259511157|sp|C4ZI07.1|MUTS2_EUBR3 RecName: Full=MutS2 protein
gi|238876937|gb|ACR76644.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
Length = 792
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 218/404 (53%), Gaps = 28/404 (6%)
Query: 393 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 452
L+ VPID+ + + L+ITGPNTGGKT+ LKTVGL +M ++GLHI +++ +K+
Sbjct: 311 LDAKKVVPIDVRLGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAI 370
Query: 453 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 512
F+ VFADIGDEQS+ QSLSTFS H+ I I+ ++ +SL L DE+ +GT+P EG AL +
Sbjct: 371 FEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAI 430
Query: 513 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 572
S+L + G+ +T+ATTH+ ELK S D ENAC EF+ L PTY++L G+PG+S+
Sbjct: 431 SILNRLHQYGA-ITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSN 489
Query: 573 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 632
A I+ +LGL ++++A+ + ++I +E + Q +E L N
Sbjct: 490 AFAISSKLGLDENIIEDAKSRINDNDLDFEDLIASLES-QRQTIEKEQ-------LEINS 541
Query: 633 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 692
+K + +K LE ++ ++ K D ++ ++ ++ A+ L K +
Sbjct: 542 YKAEIEKLKKQLE----EKNERIDKSKD------KILREANEEAYKILQDAKELADKTIR 591
Query: 693 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 752
+++ K + L DK + + + K ++P+ R
Sbjct: 592 NFNKYGQGQAPMSQMEKERSALRDKMN----DKEKKLSDIKKNTAKANHKAPKKLR---- 643
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+GD V V S KGTV + +K ++ VQ+G ++ ++ D+V
Sbjct: 644 -IGDSVLVLSLNLKGTVHTLPNAKGDLYVQMGILRSLVNINDLV 686
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 205 GRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ + + G++ S GS IEP++ V LN+EL++ + E +L A
Sbjct: 194 GRYCLPVKAEAKGNVPGMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAA 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L++K+ ++ +E+ + +LD + A+A + S+ G +P+
Sbjct: 254 LSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDF 295
>gi|374578851|ref|ZP_09651945.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
gi|374414933|gb|EHQ87368.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
Length = 788
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 216/414 (52%), Gaps = 39/414 (9%)
Query: 389 QVSALELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
Q+ ++ HP VP+ + + LVITGPNTGGKT+ LK VGL M +SGL I
Sbjct: 300 QMKLVQARHPLISGGVVPLSLELGIDFDTLVITGPNTGGKTVALKVVGLMAAMNQSGLQI 359
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ +++ F +FADIGDEQS+ QSLSTFSGH+K I II+++ +SLVLLDE+GAGT
Sbjct: 360 PAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIINRADGRSLVLLDEVGAGT 419
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL M +L E G T++TTH+G LKT Y +NA +EFD L+PTY+
Sbjct: 420 DPTEGAALAMGILAELHERGC-RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYR 478
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A IA RLGL V++ A N + E E +E++ E
Sbjct: 479 LLIGIPGKSNAFTIAGRLGLSERVLEKA-----------NTFVTEREMQVADLIENLGET 527
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS- 681
+ L K T R+ +E K ++ + + ++ A +L
Sbjct: 528 HREI----ELEKEKAETGRRAVEKQTKALEEKSIRLDEEFELLMAMARDEANELIRGVKR 583
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 741
+A +++ + L+ Q K + H +++ K++H + +K
Sbjct: 584 EADAIIEELKAALKKENKQQQDIEKARQGFHRISA--------KLDHG--------RQVK 627
Query: 742 QSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+S + +G V+++ +KG V+K+ + E++VQ G MK ++ T++
Sbjct: 628 RSGSELTADQIMLGQTVYMTKLRQKGQVVKLPNASGEVLVQAGIMKVMVPLTEL 681
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
SF G++ S+SG IEP+ V L +EL++ + + +L L+ +++ DEI
Sbjct: 207 SFPGIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEARADEIA 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTS 320
+ + QLD+V A+A S++ +P + Q MK P+ S
Sbjct: 267 DLHEALAQLDLVVAKAHLSVTMNAGTPELVAGQQMKLVQARHPLIS 312
>gi|323142314|ref|ZP_08077146.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322413198|gb|EFY04085.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 793
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 167/262 (63%), Gaps = 3/262 (1%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+++ + K +L+ITGPNTGGKT+ LK VGL +MA+ GL I +S AK+P F +V+A
Sbjct: 315 VPLNVQLGDKFTMLLITGPNTGGKTVALKAVGLFALMAQIGLFIPASS-AKMPVFRAVYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ + I+++ + LVL+DEI AGT+P EG AL M++LE
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTNLIRILNEVKAGDLVLIDEICAGTDPNEGAALAMAMLEHL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G +LT+ TTH+ ELKT Y ++ ENA +EFD V L+PTY++L GVPG S+A NI+
Sbjct: 434 HEQG-VLTMVTTHYSELKTFAYGHEGMENASVEFDPVSLRPTYRLLMGVPGSSNAFNISR 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++NA +L + V+ E++ + ++ E S L +N L
Sbjct: 493 RLGLAEDIIKNAGELLNQEHVHMENVLQELDSERRRYESGSKEIEDLRRESEQL-RNALA 551
Query: 639 TRRKILEHCASQRFRKVQKISD 660
+ E ++ RK ++ +D
Sbjct: 552 YSKSEFERRKNEMLRKAREQAD 573
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 138/311 (44%), Gaps = 46/311 (14%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLT--------QLWSINQTYQDSLRLLDE----- 99
+++ LE+DK+ + ++S A T LG++A ++ ++ + + ++LR+LDE
Sbjct: 5 AVKTLEFDKVKNMLASKAATFLGKQAIISLQIESEFSKVKRLQEETAEALRILDEGRRFP 64
Query: 100 ------TNAAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLR-------PNEALAVV 146
A ++ + GS L +L +++ ++ PN A
Sbjct: 65 FGGAFNITADVKRAELGSV---LEPEELQHIQTTVQAFASMKDFTAENVETAPNLAEYGA 121
Query: 147 ALLQFSETLQLSLRAAIKEDADLYIRFMP-----------LTQMLYQLMDMLIRNENNES 195
L QFS L+ + +AI E ++ P + + +D ++ + NN+
Sbjct: 122 ELTQFSR-LEKQIGSAIDEYGEIKDNASPKLGGLRAAIQIAKNRVKEKLDSILHDPNNQK 180
Query: 196 LFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDELQQARAS 250
F++ + ++ G R I + +++F G++ SG G+ IEPL+ V LN+++++ A
Sbjct: 181 YFMDNIVTMRGDRYVIPVKQEYKMNFPGIVHDQSGTGATLFIEPLAVVNLNNDIKRYVAE 240
Query: 251 VTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 310
+ E +L LT+ + + + L LDV+ ARA + P + L ++
Sbjct: 241 EHEEMERILRQLTQNVGAEAKALLASLEIFTTLDVICARALLAQEQHAVRPMLVLSGGVE 300
Query: 311 RSLTHEPVTSK 321
+ P+ K
Sbjct: 301 IAQGRHPLLPK 311
>gi|347525834|ref|YP_004832582.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 27782]
gi|345284793|gb|AEN78646.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 27782]
Length = 786
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 286/588 (48%), Gaps = 121/588 (20%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ SSSG IEP V LN+ L+Q + + + + +L L+E + +EIE
Sbjct: 207 AFGGIVHDQSSSGQTLFIEPKEIVELNNRLRQQQIAEKEEIKRILEELSELIAPYTEEIE 266
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ + D +NA+A L D+K + +P+ S RE +YL
Sbjct: 267 NNAKILGKFDFINAKAK-------------LAHDLKAT---QPLIS------RENDVYLR 304
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
+ +HPL L+
Sbjct: 305 QVWHPL----------------------------------------------------LD 312
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V D+ I + + +VITGPNTGGKTI LKT+GL MM +SGL I + E +++ FD
Sbjct: 313 SKKAVRNDVAIGKDYQAIVITGPNTGGKTITLKTLGLVSMMGQSGLFIPAFENSRIGVFD 372
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ +SLVL DE+GAGT+P EG AL +++
Sbjct: 373 DIFADIGDEQSIEQSLSTFSSHMTNTVEILKSIDERSLVLFDELGAGTDPQEGAALAIAI 432
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+A GS + +ATTH+ ELK Y NA MEFD LKPTY +L G+PGRS+A
Sbjct: 433 LDAVGAKGSYV-VATTHYPELKAYGYERPQTINASMEFDAETLKPTYHLLIGIPGRSNAF 491
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
+I++RLGL +V+ AR+L S ++NE+I ++ + + + E + +L S LH
Sbjct: 492 DISKRLGLDDEIVEAARKLTDQDSQDLNEMIADLVQKRHEAEEEKARFKKYLDESEKLHA 551
Query: 635 NL-------LRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
+L +R R ++E+ RK +I + A K ++++ S +
Sbjct: 552 DLEKGYGTYVRERDNMIENAK----RKANEIIENA-------QKKSEEII-------SEL 593
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
HK Q + SL + +N+ + ++ ++ +E P ++K K R K
Sbjct: 594 HKMKQ-----SGASL----IKENELIDA----RSRLNDLEQPI-----MLKKNKVLQRAK 635
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ + + D V V ++G++G + K K E VQ+G +K + D+
Sbjct: 636 KQQEFHENDDVLVKTYGQRGVLTK-RLGKHEWEVQLGILKMKIDEDDL 682
>gi|358068271|ref|ZP_09154738.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
gi|356693530|gb|EHI55204.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
Length = 846
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 212/405 (52%), Gaps = 46/405 (11%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI+I I +LVITGPNTGGKT+ LKTVGL +M +SGLHI + E + +P F +V+A
Sbjct: 374 VPINISIGDDYSLLVITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSSLPVFKNVYA 433
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFSGH+K I +II ++ SL L DE+GAGT+P EG AL ++LL
Sbjct: 434 DIGDEQSIEQSLSTFSGHMKNIVDIIKKADRSSLCLFDELGAGTDPAEGAALAIALLSHL 493
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G+ + +AT+H+ ELK + ENAC EF+ L+PTY+I+ G+PG+S+A I+
Sbjct: 494 HKKGATV-LATSHYSELKIFALNTPGIENACCEFNVETLRPTYRIIIGIPGKSNAFAISR 552
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVI--IEMERF-----KTQFLEHVHEARHFLMLSRN 631
+LGLP ++ A++ + E++ IE +RF K + + E
Sbjct: 553 KLGLPEYIIDEAKKNIEDENMSFEEILTKIEHDRFVIENEKKEINNYKAEIEKLKQTYEK 612
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 691
+ + R ILE R +S A A + ++ + SA S + K
Sbjct: 613 KNSRIQEIRENILEKA---RLEAENILSLAKETADTTINNINK--LTSAKGIGSELEKER 667
Query: 692 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEH-PATASSSVVKDIKQSPRVKRTE 750
++LR S + K+E PA S K+ + P+ R
Sbjct: 668 EKLRES-------------------------LKKLEKKPALKISK--KNSAKKPKHLR-- 698
Query: 751 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V+V S KGTV + K ++ VQ+G ++ + DI
Sbjct: 699 ---CGDSVYVHSMNLKGTVSSLPNDKGKLYVQMGILRSQVSLDDI 740
>gi|385262380|ref|ZP_10040486.1| MutS2 family protein [Streptococcus sp. SK643]
gi|385190687|gb|EIF38127.1| MutS2 family protein [Streptococcus sp. SK643]
Length = 778
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+ ++ L HP V DI + +VITGPNTGGKTI LKT+GL +MA+SGL
Sbjct: 294 QQEIQLLHARHPLVKNAVANDIHFGKDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V FD +FADIGDEQS+ QSLSTFS H+ I I+ Q SL+LLDE+GAG
Sbjct: 354 ILADKGSRVAVFDQIFADIGDEQSIEQSLSTFSSHMTNIVQILGQVNQNSLLLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY
Sbjct: 414 TDPQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E
Sbjct: 473 RFMQGVPGRSNAFEIAKRLGLSEVIVGDASQQVDQDN-DVNRIIEQLE-------EQTLE 524
Query: 622 ARHFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
+R L R + + L+ R K+ ++ ++ K + AA + + Q+
Sbjct: 525 SRKRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILK 584
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+ +H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 585 N-------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ 621
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ------KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|339499783|ref|YP_004697818.1| MutS2 protein [Spirochaeta caldaria DSM 7334]
gi|338834132|gb|AEJ19310.1| MutS2 protein [Spirochaeta caldaria DSM 7334]
Length = 821
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 145/208 (69%), Gaps = 1/208 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +TR ++ITGPNTGGKT+ LKTVGL ++M + GL + ++E +P D V+A
Sbjct: 324 VPIDLSMDSETRTVIITGPNTGGKTVTLKTVGLFILMNQFGLAVPAAEGTSLPLVDGVYA 383
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+SQSLSTFS H+ I +II+ +TS SLVLLDE+G+GT+P EG+A+ M+LL+ F
Sbjct: 384 DIGDEQSISQSLSTFSSHMTNIASIIAAATSHSLVLLDELGSGTDPEEGSAIAMALLDHF 443
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E+G+ + + TTHH LK Y+ +NA ++FD L PTY I+ G+PG S A+ IA
Sbjct: 444 IETGARV-LVTTHHSILKNYGYTKPNVQNASVDFDSRTLSPTYHIIMGIPGESRALEIAS 502
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVII 606
R GLP ++ AR +++ +II
Sbjct: 503 RNGLPQSILDRARSYLDEERTDVSALII 530
>gi|148381072|ref|YP_001255613.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 3502]
gi|148290556|emb|CAL84684.1| putative DNA mismatch repair protein [Clostridium botulinum A str.
ATCC 3502]
Length = 788
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGTKI-IATTHYSELKAYVLRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|383754385|ref|YP_005433288.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381366437|dbj|BAL83265.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 792
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 223/393 (56%), Gaps = 30/393 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP I I + R+L+ITGPNTGGKT+ +KT+GL V+MA++GL++ + +++ + +++A
Sbjct: 314 VPTTISIGQDYRMLLITGPNTGGKTVTMKTLGLLVLMAQAGLYLPVDQGSEIALYANIYA 373
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + S L+LLDE+GAGT+P EG AL MS+LE
Sbjct: 374 DIGDEQSIEQSLSTFSAHMTHIVSILDKVESDDLLLLDELGAGTDPEEGAALAMSILEKL 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E + TIATTH+ ELKT Y+ + ENAC+EFD L+PTY++L G+PG S+A I++
Sbjct: 434 LEVQA-TTIATTHYSELKTFAYTREGIENACVEFDIETLRPTYRLLIGIPGASNAFAISK 492
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ A+QL A A+ VI E+E K + + + + L + LL+
Sbjct: 493 RLGLADSLILRAQQLVKADHAQFEHVINELENEKMMYEQRNADIAERQARVKKLEEKLLK 552
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ E + ++ ++K D +A +L+ ++ ++ +Q + + + R A
Sbjct: 553 AK----EELSQKKGDIIRKAKDKSA---ALIRQTRRESEEVINQLKEQFDDQGIRARQQA 605
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
Q+ +++ A K + Q +K+ VGD V
Sbjct: 606 IQNARA-----------------KINEASAKANPGIMAQKGVGQRIDLKKI---RVGDTV 645
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
+V +KGTV++++ +++ VQVG ++ +K
Sbjct: 646 YVKKLDQKGTVLEIQG--KDLTVQVGALRTKLK 676
>gi|170761509|ref|YP_001788443.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A3 str. Loch Maree]
gi|238688791|sp|B1L0S3.1|MUTS2_CLOBM RecName: Full=MutS2 protein
gi|169408498|gb|ACA56909.1| MutS2 family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 788
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRREVVPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + G+ + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGAKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNALID---ARREAKNIIKEAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V ++S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLASINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|259502869|ref|ZP_05745771.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
gi|259169236|gb|EEW53731.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
Length = 790
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 224/413 (54%), Gaps = 46/413 (11%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L ++ QV+ + HP V DI + + ++ITGPNTGGKTI LKT+G+ +M
Sbjct: 294 LLSADNQVNLRKAWHPLIARDQAVANDIKLGGDYQAVIITGPNTGGKTITLKTLGIIQLM 353
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
++GL I + E + + FD+VFADIGDEQSL Q+LSTFSGH++ + I+ Q T++SLVLL
Sbjct: 354 GQAGLFIPAQEGSTIGVFDNVFADIGDEQSLEQNLSTFSGHMENVKAILDQLTARSLVLL 413
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL M++L+ + GSL+ I TTH+ ELK Y NA MEFD+
Sbjct: 414 DELGAGTDPKEGAALAMAILDEIGQWGSLVMI-TTHYPELKVYGYDRAKTINASMEFDQA 472
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
L+PTY++L G+PGRS+ + IA+RLG+ ++ A+ L S ++N +I ++ + +
Sbjct: 473 TLQPTYRLLLGIPGRSNGLEIAKRLGIGSAIIGEAQSLVSDDSQDLNAMIGDLVEQRKRA 532
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
E + ++ + L + L+ QR R +++ ARS ++ Q
Sbjct: 533 REEGDRLAKLVAQNQADQEEL----NQKLDRFNEQRDRLLER-------ARS---QANHQ 578
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ + +A ++H +QL + ++ Q L + Q ++P +S
Sbjct: 579 VAQAKRKADRIIH-HLRQLEIQQGAGVKENQLIDAQGALNALHQ-------DNPRLQHNS 630
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V+K R K + GD V V S+G+ G E++ + GN KW
Sbjct: 631 VLK------RAKAKHDLHKGDAVLVKSYGQHG----------ELLSRRGNHKW 667
>gi|326791035|ref|YP_004308856.1| MutS2 protein [Clostridium lentocellum DSM 5427]
gi|326541799|gb|ADZ83658.1| MutS2 protein [Clostridium lentocellum DSM 5427]
Length = 797
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 210/410 (51%), Gaps = 78/410 (19%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R CI + S FKG++ SS+G IEP++ V L + L+ + E +L+ L
Sbjct: 196 RYCIPIKIEYKSQFKGIVHDQSSTGATVFIEPMAVVELGNALKSLEVKEQEEIEKLLIEL 255
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
T ++ +EI + + LD + AR+ +SL + P +
Sbjct: 256 TNQIAPITEEIGRNYELLTLLDSIFARSEFSLRYDCREPRL------------------- 296
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
+ I+L KA HPLL
Sbjct: 297 ---NNQGYIFLKKARHPLL----------------------------------------- 312
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
A E P+ DI++ + L+ITGPNTGGKT+ LKT+GL +MA GL I
Sbjct: 313 ---------AKESVVPI--DIYVGKDFTTLLITGPNTGGKTVTLKTIGLFSLMAAIGLQI 361
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++E +++ F+ ++AD+GDEQS+ QSLSTFS H+ I +I+ + SLVLLDE+G+GT
Sbjct: 362 PAAEGSEMAIFEGIYADLGDEQSIEQSLSTFSAHMTNIVSILKDMSLNSLVLLDEVGSGT 421
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P+EG AL M++LE + + T+ATTH+ ELK S D ENA EFD L+PTY+
Sbjct: 422 DPVEGAALAMAILEHLRKQ-QIRTVATTHYSELKLYALSTDGVENASCEFDVESLRPTYR 480
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFK 612
+L GVPG+S+A I+ +LGLP ++ A+ + ++ ++++++E+ K
Sbjct: 481 LLIGVPGKSNAFAISMKLGLPEYLIDEAKVYLQKENVKMEDILVDLEQSK 530
>gi|386087362|ref|YP_006003236.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
gi|312279075|gb|ADQ63732.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
Length = 783
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ V+VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L+PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLRPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQIVETQKRLEHIKD 534
>gi|431374601|ref|ZP_19510289.1| MutS2 protein [Enterococcus faecium E1627]
gi|430583225|gb|ELB21614.1| MutS2 protein [Enterococcus faecium E1627]
Length = 786
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E R+F+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDL 553
>gi|392375798|ref|YP_003207631.1| MutS2 protein [Candidatus Methylomirabilis oxyfera]
gi|258593491|emb|CBE69830.1| putative MutS2 protein [Candidatus Methylomirabilis oxyfera]
Length = 804
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 194/372 (52%), Gaps = 68/372 (18%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S SG+ +EP V LN++L+ + S + VL ALT ++ D + + +L
Sbjct: 218 SISGVTIFLEPQEVVELNNQLRLLQRSEEEEIRRVLAALTATLRATADAVLSTMLLAAEL 277
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
DV A A ++ +L PV K + + L +A HPLLL+
Sbjct: 278 DVRCAAARFA-----------------DTLHCAPVALKEAGP-----LLLREAGHPLLLE 315
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
+ + A + +PID+
Sbjct: 316 R---------------------------------------------IDAAGIHRTIPIDL 330
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ L+ITGPNTGGKT+ LKT GL +MA++GLH+ +S ++VP+F V ADIGDE
Sbjct: 331 RLGDSFDALLITGPNTGGKTVALKTAGLLSLMAQAGLHLPASPDSEVPFFSGVLADIGDE 390
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ QI I+ + +LVLLDE+GAGT+P+EG LG+++L+A E G+
Sbjct: 391 QSIEQSLSTFSSHIGQIRRILDAAQPGTLVLLDELGAGTDPVEGACLGIAILDALLERGA 450
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
L+ +ATTH +K YS+ EN C+EFD L+P YK+L G+ GRS + IA R+GLP
Sbjct: 451 LV-VATTHLDAIKAYAYSHPRIENGCVEFDLDTLRPLYKLLIGLSGRSHGLAIASRVGLP 509
Query: 584 GIVVQNARQLYG 595
V+Q A +L G
Sbjct: 510 LRVIQQAERLLG 521
>gi|406586214|ref|ZP_11061148.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD1S]
gi|419818288|ref|ZP_14342355.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD4S]
gi|404463504|gb|EKA09128.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD4S]
gi|404474310|gb|EKA18627.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD1S]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 208/391 (53%), Gaps = 50/391 (12%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALNESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSA--SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+H ++ QL+P K+ + L+ N
Sbjct: 586 ------LHSKS-QLKPHEIIEAKAELKKLAPEKVYLSKN--------------------- 617
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
K + K+ P VGD + V S+G++GT+
Sbjct: 618 --KVLQKAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|149023694|ref|ZP_01836174.1| MutS2 family protein [Streptococcus pneumoniae SP23-BS72]
gi|168482643|ref|ZP_02707595.1| MutS2 family protein [Streptococcus pneumoniae CDC1873-00]
gi|168490681|ref|ZP_02714824.1| MutS2 family protein [Streptococcus pneumoniae CDC0288-04]
gi|417695580|ref|ZP_12344760.1| mutS2 family protein [Streptococcus pneumoniae GA47368]
gi|417697875|ref|ZP_12347048.1| mutS2 family protein [Streptococcus pneumoniae GA41317]
gi|418073266|ref|ZP_12710529.1| mutS2 family protein [Streptococcus pneumoniae GA11184]
gi|418091044|ref|ZP_12728189.1| mutS2 family protein [Streptococcus pneumoniae GA44452]
gi|418102131|ref|ZP_12739208.1| mutS2 family protein [Streptococcus pneumoniae NP070]
gi|418106768|ref|ZP_12743810.1| mutS2 family protein [Streptococcus pneumoniae GA41410]
gi|418120511|ref|ZP_12757459.1| mutS2 family protein [Streptococcus pneumoniae GA44194]
gi|418129585|ref|ZP_12766469.1| mutS2 family protein [Streptococcus pneumoniae GA07643]
gi|418161460|ref|ZP_12798151.1| mutS2 family protein [Streptococcus pneumoniae GA17328]
gi|418168515|ref|ZP_12805161.1| mutS2 family protein [Streptococcus pneumoniae GA19077]
gi|418175226|ref|ZP_12811824.1| mutS2 family protein [Streptococcus pneumoniae GA41437]
gi|418182027|ref|ZP_12818588.1| mutS2 family protein [Streptococcus pneumoniae GA43380]
gi|418186422|ref|ZP_12822953.1| mutS2 family protein [Streptococcus pneumoniae GA47360]
gi|418218162|ref|ZP_12844830.1| mutS2 family protein [Streptococcus pneumoniae NP127]
gi|418229151|ref|ZP_12855761.1| mutS2 family protein [Streptococcus pneumoniae EU-NP01]
gi|418237997|ref|ZP_12864554.1| mutS2 family protein [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419452260|ref|ZP_13992235.1| MutS2 family protein [Streptococcus pneumoniae EU-NP03]
gi|419459280|ref|ZP_13999216.1| MutS2 family protein [Streptococcus pneumoniae GA02270]
gi|419461555|ref|ZP_14001472.1| MutS2 family protein [Streptococcus pneumoniae GA02714]
gi|419474811|ref|ZP_14014653.1| MutS2 family protein [Streptococcus pneumoniae GA14688]
gi|419477073|ref|ZP_14016899.1| MutS2 family protein [Streptococcus pneumoniae GA18068]
gi|419485918|ref|ZP_14025685.1| MutS2 family protein [Streptococcus pneumoniae GA44128]
gi|419488253|ref|ZP_14028006.1| MutS2 family protein [Streptococcus pneumoniae GA44386]
gi|419505396|ref|ZP_14045057.1| MutS2 family protein [Streptococcus pneumoniae GA49194]
gi|419525175|ref|ZP_14064741.1| mutS2 family protein [Streptococcus pneumoniae GA14373]
gi|421208283|ref|ZP_15665308.1| mutS2 protein [Streptococcus pneumoniae 2070005]
gi|421239988|ref|ZP_15696541.1| mutS2 protein [Streptococcus pneumoniae 2080913]
gi|421242244|ref|ZP_15698771.1| mutS2 protein [Streptococcus pneumoniae 2081074]
gi|421269842|ref|ZP_15720699.1| mutS2 family protein [Streptococcus pneumoniae SPAR48]
gi|421272066|ref|ZP_15722913.1| mutS2 family protein [Streptococcus pneumoniae SPAR55]
gi|147929631|gb|EDK80623.1| MutS2 family protein [Streptococcus pneumoniae SP23-BS72]
gi|172043586|gb|EDT51632.1| MutS2 family protein [Streptococcus pneumoniae CDC1873-00]
gi|183574892|gb|EDT95420.1| MutS2 family protein [Streptococcus pneumoniae CDC0288-04]
gi|332202316|gb|EGJ16385.1| mutS2 family protein [Streptococcus pneumoniae GA41317]
gi|332203577|gb|EGJ17644.1| mutS2 family protein [Streptococcus pneumoniae GA47368]
gi|353752804|gb|EHD33429.1| mutS2 family protein [Streptococcus pneumoniae GA11184]
gi|353766417|gb|EHD46957.1| mutS2 family protein [Streptococcus pneumoniae GA44452]
gi|353777843|gb|EHD58315.1| mutS2 family protein [Streptococcus pneumoniae NP070]
gi|353780964|gb|EHD61414.1| mutS2 family protein [Streptococcus pneumoniae GA41410]
gi|353795066|gb|EHD75418.1| mutS2 family protein [Streptococcus pneumoniae GA44194]
gi|353802877|gb|EHD83169.1| mutS2 family protein [Streptococcus pneumoniae GA07643]
gi|353831050|gb|EHE11179.1| mutS2 family protein [Streptococcus pneumoniae GA17328]
gi|353836434|gb|EHE16522.1| mutS2 family protein [Streptococcus pneumoniae GA19077]
gi|353843786|gb|EHE23830.1| mutS2 family protein [Streptococcus pneumoniae GA41437]
gi|353850264|gb|EHE30268.1| mutS2 family protein [Streptococcus pneumoniae GA43380]
gi|353854244|gb|EHE34224.1| mutS2 family protein [Streptococcus pneumoniae GA47360]
gi|353876359|gb|EHE56208.1| mutS2 family protein [Streptococcus pneumoniae NP127]
gi|353890988|gb|EHE70747.1| mutS2 family protein [Streptococcus pneumoniae EU-NP01]
gi|353895130|gb|EHE74870.1| mutS2 family protein [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379534152|gb|EHY99364.1| MutS2 family protein [Streptococcus pneumoniae GA02270]
gi|379535080|gb|EHZ00287.1| MutS2 family protein [Streptococcus pneumoniae GA02714]
gi|379560879|gb|EHZ25901.1| mutS2 family protein [Streptococcus pneumoniae GA14373]
gi|379562318|gb|EHZ27332.1| MutS2 family protein [Streptococcus pneumoniae GA14688]
gi|379567872|gb|EHZ32855.1| MutS2 family protein [Streptococcus pneumoniae GA18068]
gi|379588827|gb|EHZ53667.1| MutS2 family protein [Streptococcus pneumoniae GA44128]
gi|379590368|gb|EHZ55206.1| MutS2 family protein [Streptococcus pneumoniae GA44386]
gi|379607310|gb|EHZ72056.1| MutS2 family protein [Streptococcus pneumoniae GA49194]
gi|379628223|gb|EHZ92827.1| MutS2 family protein [Streptococcus pneumoniae EU-NP03]
gi|395576753|gb|EJG37307.1| mutS2 protein [Streptococcus pneumoniae 2070005]
gi|395610862|gb|EJG70938.1| mutS2 protein [Streptococcus pneumoniae 2080913]
gi|395611577|gb|EJG71645.1| mutS2 protein [Streptococcus pneumoniae 2081074]
gi|395870494|gb|EJG81607.1| mutS2 family protein [Streptococcus pneumoniae SPAR48]
gi|395877625|gb|EJG88694.1| mutS2 family protein [Streptococcus pneumoniae SPAR55]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|15902412|ref|NP_357962.1| MutS2 family protein [Streptococcus pneumoniae R6]
gi|116517220|ref|YP_815881.1| MutS2 family protein [Streptococcus pneumoniae D39]
gi|421265469|ref|ZP_15716353.1| mutS2 family protein [Streptococcus pneumoniae SPAR27]
gi|81744150|sp|Q8DR26.1|MUTS2_STRR6 RecName: Full=MutS2 protein
gi|122279233|sp|Q04M67.1|MUTS2_STRP2 RecName: Full=MutS2 protein
gi|15457928|gb|AAK99172.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|116077796|gb|ABJ55516.1| MutS2 family protein [Streptococcus pneumoniae D39]
gi|395869491|gb|EJG80606.1| mutS2 family protein [Streptococcus pneumoniae SPAR27]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|421235605|ref|ZP_15692206.1| mutS2 protein [Streptococcus pneumoniae 2071004]
gi|395604524|gb|EJG64656.1| mutS2 protein [Streptococcus pneumoniae 2071004]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|418088176|ref|ZP_12725341.1| mutS2 family protein [Streptococcus pneumoniae GA47033]
gi|418201690|ref|ZP_12838122.1| mutS2 family protein [Streptococcus pneumoniae GA52306]
gi|419454801|ref|ZP_13994764.1| MutS2 family protein [Streptococcus pneumoniae EU-NP04]
gi|421284737|ref|ZP_15735515.1| mutS2 protein [Streptococcus pneumoniae GA60190]
gi|421306610|ref|ZP_15757257.1| mutS2 protein [Streptococcus pneumoniae GA60132]
gi|353755853|gb|EHD36456.1| mutS2 family protein [Streptococcus pneumoniae GA47033]
gi|353869166|gb|EHE49049.1| mutS2 family protein [Streptococcus pneumoniae GA52306]
gi|379631242|gb|EHZ95822.1| MutS2 family protein [Streptococcus pneumoniae EU-NP04]
gi|395888657|gb|EJG99668.1| mutS2 protein [Streptococcus pneumoniae GA60190]
gi|395910320|gb|EJH21194.1| mutS2 protein [Streptococcus pneumoniae GA60132]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|430847896|ref|ZP_19465729.1| MutS2 protein [Enterococcus faecium E1133]
gi|430849196|ref|ZP_19466977.1| MutS2 protein [Enterococcus faecium E1185]
gi|431748902|ref|ZP_19537654.1| MutS2 protein [Enterococcus faecium E2297]
gi|430536272|gb|ELA76648.1| MutS2 protein [Enterococcus faecium E1133]
gi|430538042|gb|ELA78341.1| MutS2 protein [Enterococcus faecium E1185]
gi|430612427|gb|ELB49467.1| MutS2 protein [Enterococcus faecium E2297]
Length = 786
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E R+F+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDL 553
>gi|417794466|ref|ZP_12441720.1| MutS2 family protein [Streptococcus oralis SK255]
gi|334269366|gb|EGL87785.1| MutS2 family protein [Streptococcus oralis SK255]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V DI ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDIHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADRGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|331266978|ref|YP_004326608.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus oralis Uo5]
gi|326683650|emb|CBZ01268.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus oralis Uo5]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKNRAPKVGDDIIVLSYGQRGTL 646
>gi|187776956|ref|ZP_02993429.1| hypothetical protein CLOSPO_00500 [Clostridium sporogenes ATCC
15579]
gi|187775615|gb|EDU39417.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes ATCC 15579]
Length = 788
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 220/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP +PI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGKHPLIDRREVIPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + GS + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGSKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A I + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNAFID---ARREAKNIIREAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V + S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLVSINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSAKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|146317891|ref|YP_001197603.1| mismatch repair ATPase [Streptococcus suis 05ZYH33]
gi|146320079|ref|YP_001199790.1| mismatch repair ATPase [Streptococcus suis 98HAH33]
gi|253751124|ref|YP_003024265.1| DNA mismatch repair protein [Streptococcus suis SC84]
gi|229486384|sp|A4VZ51.1|MUTS2_STRS2 RecName: Full=MutS2 protein
gi|229486386|sp|A4VSW4.1|MUTS2_STRSY RecName: Full=MutS2 protein
gi|145688697|gb|ABP89203.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 05ZYH33]
gi|145690885|gb|ABP91390.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 98HAH33]
gi|251815413|emb|CAZ50988.1| putative DNA mismatch repair protein [Streptococcus suis SC84]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 308 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 367
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ + SL+L DE+GAGT+P EG +L M++
Sbjct: 368 EIFADIGDEQSIEQSLSTFSSHMTHTVEILRAADQDSLILFDELGAGTDPQEGASLAMAI 427
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 428 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAF 486
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 487 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 525
>gi|421233455|ref|ZP_15690079.1| mutS2 protein [Streptococcus pneumoniae 2061617]
gi|421248758|ref|ZP_15705221.1| mutS2 protein [Streptococcus pneumoniae 2082239]
gi|395603295|gb|EJG63432.1| mutS2 protein [Streptococcus pneumoniae 2061617]
gi|395615387|gb|EJG75403.1| mutS2 protein [Streptococcus pneumoniae 2082239]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|415748771|ref|ZP_11476823.1| mutS2 protein [Streptococcus pneumoniae SV35]
gi|381319028|gb|EIC59745.1| mutS2 protein [Streptococcus pneumoniae SV35]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|417915303|ref|ZP_12558920.1| MutS2 family protein [Streptococcus mitis bv. 2 str. SK95]
gi|342834838|gb|EGU69097.1| MutS2 family protein [Streptococcus mitis bv. 2 str. SK95]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNKHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|221231273|ref|YP_002510425.1| DNA mismatch repair protein [Streptococcus pneumoniae ATCC 700669]
gi|415697001|ref|ZP_11456575.1| mutS2 protein [Streptococcus pneumoniae 459-5]
gi|415751480|ref|ZP_11478715.1| mutS2 protein [Streptococcus pneumoniae SV36]
gi|418122717|ref|ZP_12759652.1| mutS2 family protein [Streptococcus pneumoniae GA44378]
gi|418127301|ref|ZP_12764199.1| mutS2 family protein [Streptococcus pneumoniae NP170]
gi|418136468|ref|ZP_12773312.1| mutS2 family protein [Streptococcus pneumoniae GA11663]
gi|418177471|ref|ZP_12814055.1| mutS2 family protein [Streptococcus pneumoniae GA41565]
gi|419472503|ref|ZP_14012356.1| MutS2 family protein [Streptococcus pneumoniae GA13430]
gi|254766603|sp|B8ZLH4.1|MUTS2_STRPJ RecName: Full=MutS2 protein
gi|220673733|emb|CAR68232.1| putative DNA mismatch repair protein [Streptococcus pneumoniae ATCC
700669]
gi|353798190|gb|EHD78520.1| mutS2 family protein [Streptococcus pneumoniae GA44378]
gi|353801106|gb|EHD81414.1| mutS2 family protein [Streptococcus pneumoniae NP170]
gi|353844245|gb|EHE24288.1| mutS2 family protein [Streptococcus pneumoniae GA41565]
gi|353903526|gb|EHE79050.1| mutS2 family protein [Streptococcus pneumoniae GA11663]
gi|379553405|gb|EHZ18489.1| MutS2 family protein [Streptococcus pneumoniae GA13430]
gi|381311085|gb|EIC51910.1| mutS2 protein [Streptococcus pneumoniae SV36]
gi|381319709|gb|EIC60399.1| mutS2 protein [Streptococcus pneumoniae 459-5]
Length = 778
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|419781259|ref|ZP_14307091.1| MutS2 family protein [Streptococcus oralis SK100]
gi|383184651|gb|EIC77165.1| MutS2 family protein [Streptococcus oralis SK100]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|418188651|ref|ZP_12825166.1| mutS2 family protein [Streptococcus pneumoniae GA47373]
gi|353855793|gb|EHE35762.1| mutS2 family protein [Streptococcus pneumoniae GA47373]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|386581264|ref|YP_006077668.1| DNA mismatch repair protein [Streptococcus suis SS12]
gi|353733410|gb|AER14420.1| DNA mismatch repair protein [Streptococcus suis SS12]
Length = 777
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ + SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVEILRAADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|253753025|ref|YP_003026165.1| DNA mismatch repair protein [Streptococcus suis P1/7]
gi|253754848|ref|YP_003027988.1| DNA mismatch repair protein [Streptococcus suis BM407]
gi|386577218|ref|YP_006073623.1| DNA structure-specific ATPase involved in suppression of
recombination, MutS family [Streptococcus suis GZ1]
gi|386579197|ref|YP_006075602.1| DNA mismatch repair protein [Streptococcus suis JS14]
gi|386587494|ref|YP_006083895.1| DNA mismatch repair protein [Streptococcus suis A7]
gi|403060908|ref|YP_006649124.1| DNA mismatch repair protein [Streptococcus suis S735]
gi|251817312|emb|CAZ55044.1| putative DNA mismatch repair protein [Streptococcus suis BM407]
gi|251819270|emb|CAR44564.1| putative DNA mismatch repair protein [Streptococcus suis P1/7]
gi|292557680|gb|ADE30681.1| DNA structure-specific ATPase involved in suppression of
recombination, MutS family [Streptococcus suis GZ1]
gi|319757389|gb|ADV69331.1| DNA mismatch repair protein [Streptococcus suis JS14]
gi|354984655|gb|AER43553.1| DNA mismatch repair protein [Streptococcus suis A7]
gi|402808234|gb|AFQ99725.1| DNA mismatch repair protein [Streptococcus suis S735]
Length = 777
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ + SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVEILRAADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|167772055|ref|ZP_02444108.1| hypothetical protein ANACOL_03429 [Anaerotruncus colihominis DSM
17241]
gi|167665853|gb|EDS09983.1| MutS2 family protein [Anaerotruncus colihominis DSM 17241]
Length = 793
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 289/623 (46%), Gaps = 129/623 (20%)
Query: 182 QLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLS 236
+++D L+R+ + E ++ GR + + + KGL+ +SG G+ IEP+
Sbjct: 166 EVLDRLVRSATYQKYLQENIITQRDGRFVVPVRQEYRNEIKGLVHDTSGSGATVFIEPMG 225
Query: 237 AVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSF 296
V N+E++ + + +L L+ ++ D I I++LD+ A++
Sbjct: 226 VVEANNEIRILQGQEQAEIDRILRELSAQVGACADSIGGSYEAIVELDLYFAKSR----- 280
Query: 297 GGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDL 356
L +M+ + EP S+ ++E L +A HP
Sbjct: 281 --------LADEMRAT---EPAISETGAAE------LKRARHP----------------- 306
Query: 357 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 416
L P++ VPID+ + LV+TG
Sbjct: 307 --------------------------LLPAD---------RVVPIDLRLGGDFDTLVVTG 331
Query: 417 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 476
PNTGGKT+ +KT+GL MA+ GL + +++ + VP F+ + DIGDEQS+ QSLSTFS H
Sbjct: 332 PNTGGKTVAIKTLGLLSAMAQCGLMLPAADGSTVPVFEKLLVDIGDEQSIEQSLSTFSAH 391
Query: 477 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 536
+ I I+ ++ +SLVLLDE+GAGT+P+EG AL ++++E G+ + +ATTH+ E+K
Sbjct: 392 MTNIIRILDEADGRSLVLLDELGAGTDPVEGAALAVAIIERLRAQGAKV-VATTHYAEIK 450
Query: 537 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 596
+ ENA EFD L+PTY++L GVPGRS+A I ERLGLP V++ AR
Sbjct: 451 MYALNTPGVENASCEFDVATLRPTYRLLIGVPGRSNAFAICERLGLPAGVIEAARAHVSG 510
Query: 597 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQ 656
+ EV+ ++E+ + + L R R SQR +
Sbjct: 511 ENLRFEEVVSQLEQTR---------------------QELERAR----VQAESQRAGAQR 545
Query: 657 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQ----------LRPSASQSLHCTK 706
+ +A A+ R++ + +++ + QAR +V + Q LR + +
Sbjct: 546 ERDEADALRRAMEQEREREIERARVQARGIVEQAGMQAQKLLDELDELRRQKDSAGFAER 605
Query: 707 VGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ-SPRVKRTELP-NVGDLVHVSSFG 764
+ + +N ++ + + P T K+I+Q +P E P GD V + S G
Sbjct: 606 AAQAKSAFKANMRR--LHDLADPVTR-----KNIEQYTP-----ERPLKRGDTVRLVSLG 653
Query: 765 KKGTVIKVEPSKEEIVVQVGNMK 787
++GTV+ + + VQ G +K
Sbjct: 654 REGTVLSAPDGQGFVQVQAGIIK 676
>gi|418147871|ref|ZP_12784638.1| mutS2 family protein [Streptococcus pneumoniae GA13856]
gi|353814069|gb|EHD94296.1| mutS2 family protein [Streptococcus pneumoniae GA13856]
Length = 780
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 298 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 357
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 358 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 417
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 418 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 476
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 477 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 528
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 529 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 587
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 588 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 623
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 624 ----KAKKKRAPKVGDDIVVLSYGQRGTL 648
>gi|261208743|ref|ZP_05923180.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565573|ref|ZP_06446020.1| MutS2 protein [Enterococcus faecium D344SRF]
gi|260077245|gb|EEW64965.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162655|gb|EFD10508.1| MutS2 protein [Enterococcus faecium D344SRF]
Length = 786
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 320 DITIGKDYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I+S+ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
L V+ A+QL S ++NE+I ++E + E R+F+ ++ LH +L
Sbjct: 499 LDTEVIDEAKQLMNDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDL 553
>gi|418166030|ref|ZP_12802688.1| mutS2 family protein [Streptococcus pneumoniae GA17971]
gi|353832125|gb|EHE12248.1| mutS2 family protein [Streptococcus pneumoniae GA17971]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|293364830|ref|ZP_06611547.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
gi|307703079|ref|ZP_07640026.1| mutS2 protein [Streptococcus oralis ATCC 35037]
gi|291316280|gb|EFE56716.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
gi|307623472|gb|EFO02462.1| mutS2 protein [Streptococcus oralis ATCC 35037]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALNESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|347752968|ref|YP_004860533.1| MutS2 family protein [Bacillus coagulans 36D1]
gi|347585486|gb|AEP01753.1| MutS2 family protein [Bacillus coagulans 36D1]
Length = 784
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 158/238 (66%), Gaps = 1/238 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP DI I ++ +VITGPNTGGKTI LKT+GL +MA++GL I + + +++ F VFA
Sbjct: 318 VPNDITIGQEYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEMAVFKEVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ + QSLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + + +ATTH+ ELK Y+ + NA +EFD L PTY++L GVPGRS+A I+
Sbjct: 438 YKREARV-VATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRSNAFEISR 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 636
RLGL ++++A+ L GA + E+ +I +E + + + EA+ L + LH++L
Sbjct: 497 RLGLSPSIIEHAQSLIGADTNEVENMIAALESARREAEKERQEAQELLKDAEELHRDL 554
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 59/300 (19%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
++ LE+DK+ + + A + LG E S +Y++ +R+ +ET+ A ++
Sbjct: 6 IKTLEFDKIKNLLLEHASSPLGAEKIEALFPS--SSYEEVVRMQEETDEAAQV------- 56
Query: 114 LDLTG-VDLSLVKSAIREVRRAS---PLRPNEALAVVALLQFSET--------------- 154
L L G V L + R ++RA+ L P E + + + + S T
Sbjct: 57 LRLKGHVPLFGIYDIRRHLKRAAIGGRLNPQELVQIASTIHVSRTMKRFIEGITEEETEL 116
Query: 155 ---------------LQLSLRAAIKEDADLY---------IR--FMPLTQMLYQLMDMLI 188
L+ +R A+ E+ ++ IR + + + ++ I
Sbjct: 117 PILTSMVDRIAVLTPLEHEIRNAVDENGEILDSASETLRQIRHGLRGTERRIREKLEGYI 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R +N + + ++ + R CI + + G ++ SSSG IEP S V LN++
Sbjct: 177 RGKNAAKMLSDAIITIRNDRYCIPVKQEYRANYGGIVHDQSSSGQTLFIEPQSVVDLNNQ 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 303
L++ + E +L L+ + E+E ++ + D + A+A Y S G+ P I
Sbjct: 237 LREWHLKEQQEVERILSELSAAVAAAGGELETIVEILADFDFMFAKALYGRSIKGSKPVI 296
>gi|423484112|ref|ZP_17460802.1| MutS2 protein [Bacillus cereus BAG6X1-2]
gi|401139138|gb|EJQ46701.1| MutS2 protein [Bacillus cereus BAG6X1-2]
Length = 786
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILERADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 YNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHC--ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E +R K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDDRDERLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LANVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 643 AGDEVKVLTFGQKGQLLK-KVSDTEWNVQIGILKMKVKESNM 683
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 128/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S ++ + S L P+E + + + + S ++ + ++ +L
Sbjct: 63 ----VPLGGI--SDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMVENGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILVGHVAQIISLYDLEKKITNCIGDGGEVLDSASDKLRGIRNQIRTAESRIREKLESMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNDRYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|225858260|ref|YP_002739770.1| MutS2 family protein [Streptococcus pneumoniae 70585]
gi|254766602|sp|C1C5E4.1|MUTS2_STRP7 RecName: Full=MutS2 protein
gi|225720222|gb|ACO16076.1| MutS2 family protein [Streptococcus pneumoniae 70585]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRVLKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|225856135|ref|YP_002737646.1| MutS2 family protein [Streptococcus pneumoniae P1031]
gi|410475889|ref|YP_006742648.1| MutS2 family protein [Streptococcus pneumoniae gamPNI0373]
gi|419441830|ref|ZP_13981865.1| MutS2 family protein [Streptococcus pneumoniae GA13224]
gi|444387199|ref|ZP_21185223.1| MutS2 family protein [Streptococcus pneumoniae PCS125219]
gi|444390444|ref|ZP_21188359.1| MutS2 family protein [Streptococcus pneumoniae PCS70012]
gi|444395344|ref|ZP_21192889.1| MutS2 family protein [Streptococcus pneumoniae PNI0002]
gi|444396870|ref|ZP_21194357.1| MutS2 family protein [Streptococcus pneumoniae PNI0006]
gi|444399230|ref|ZP_21196699.1| MutS2 family protein [Streptococcus pneumoniae PNI0007]
gi|444401834|ref|ZP_21199014.1| MutS2 family protein [Streptococcus pneumoniae PNI0008]
gi|444403988|ref|ZP_21200957.1| MutS2 family protein [Streptococcus pneumoniae PNI0009]
gi|444408439|ref|ZP_21205083.1| MutS2 family protein [Streptococcus pneumoniae PNI0010]
gi|444413805|ref|ZP_21210120.1| MutS2 family protein [Streptococcus pneumoniae PNI0153]
gi|444415602|ref|ZP_21211835.1| MutS2 family protein [Streptococcus pneumoniae PNI0199]
gi|444417959|ref|ZP_21213954.1| MutS2 family protein [Streptococcus pneumoniae PNI0360]
gi|444419970|ref|ZP_21215802.1| MutS2 family protein [Streptococcus pneumoniae PNI0427]
gi|444421941|ref|ZP_21217608.1| MutS2 family protein [Streptococcus pneumoniae PNI0446]
gi|254766606|sp|C1CIQ8.1|MUTS2_STRZP RecName: Full=MutS2 protein
gi|225724925|gb|ACO20777.1| MutS2 family protein [Streptococcus pneumoniae P1031]
gi|379555326|gb|EHZ20395.1| MutS2 family protein [Streptococcus pneumoniae GA13224]
gi|406368834|gb|AFS42524.1| MutS2 family protein [Streptococcus pneumoniae gamPNI0373]
gi|444253797|gb|ELU60251.1| MutS2 family protein [Streptococcus pneumoniae PCS125219]
gi|444256907|gb|ELU63245.1| MutS2 family protein [Streptococcus pneumoniae PCS70012]
gi|444258302|gb|ELU64628.1| MutS2 family protein [Streptococcus pneumoniae PNI0002]
gi|444262101|gb|ELU68399.1| MutS2 family protein [Streptococcus pneumoniae PNI0006]
gi|444267525|gb|ELU73424.1| MutS2 family protein [Streptococcus pneumoniae PNI0008]
gi|444268936|gb|ELU74755.1| MutS2 family protein [Streptococcus pneumoniae PNI0007]
gi|444270097|gb|ELU75891.1| MutS2 family protein [Streptococcus pneumoniae PNI0010]
gi|444272976|gb|ELU78663.1| MutS2 family protein [Streptococcus pneumoniae PNI0153]
gi|444277633|gb|ELU83135.1| MutS2 family protein [Streptococcus pneumoniae PNI0009]
gi|444279442|gb|ELU84839.1| MutS2 family protein [Streptococcus pneumoniae PNI0199]
gi|444282274|gb|ELU87549.1| MutS2 family protein [Streptococcus pneumoniae PNI0360]
gi|444285907|gb|ELU90920.1| MutS2 family protein [Streptococcus pneumoniae PNI0427]
gi|444288711|gb|ELU93601.1| MutS2 family protein [Streptococcus pneumoniae PNI0446]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|149008003|ref|ZP_01831560.1| MutS2 family protein [Streptococcus pneumoniae SP18-BS74]
gi|307126622|ref|YP_003878653.1| MutS2 family protein [Streptococcus pneumoniae 670-6B]
gi|417676186|ref|ZP_12325599.1| mutS2 family protein [Streptococcus pneumoniae GA17545]
gi|418154459|ref|ZP_12791190.1| mutS2 family protein [Streptococcus pneumoniae GA16242]
gi|418224862|ref|ZP_12851491.1| mutS2 family protein [Streptococcus pneumoniae NP112]
gi|419466032|ref|ZP_14005918.1| MutS2 family protein [Streptococcus pneumoniae GA05248]
gi|419511835|ref|ZP_14051469.1| MutS2 family protein [Streptococcus pneumoniae GA05578]
gi|419516120|ref|ZP_14055738.1| MutS2 family protein [Streptococcus pneumoniae GA02506]
gi|421282621|ref|ZP_15733411.1| mutS2 protein [Streptococcus pneumoniae GA04216]
gi|147760515|gb|EDK67491.1| MutS2 family protein [Streptococcus pneumoniae SP18-BS74]
gi|306483684|gb|ADM90553.1| MutS2 family protein [Streptococcus pneumoniae 670-6B]
gi|332076851|gb|EGI87313.1| mutS2 family protein [Streptococcus pneumoniae GA17545]
gi|353822751|gb|EHE02926.1| mutS2 family protein [Streptococcus pneumoniae GA16242]
gi|353882170|gb|EHE61981.1| mutS2 family protein [Streptococcus pneumoniae NP112]
gi|379547604|gb|EHZ12741.1| MutS2 family protein [Streptococcus pneumoniae GA05248]
gi|379636305|gb|EIA00863.1| MutS2 family protein [Streptococcus pneumoniae GA05578]
gi|379640123|gb|EIA04662.1| MutS2 family protein [Streptococcus pneumoniae GA02506]
gi|395884591|gb|EJG95629.1| mutS2 protein [Streptococcus pneumoniae GA04216]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRVLKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|333998204|ref|YP_004530816.1| MutS2 family protein [Treponema primitia ZAS-2]
gi|333740584|gb|AEF86074.1| MutS2 family protein [Treponema primitia ZAS-2]
Length = 894
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 140/207 (67%), Gaps = 1/207 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID + R ++ITGPNTGGKT+ LKTVGL +M +SGL + S E +P FD ++A
Sbjct: 376 VPIDFLMDGTIRTVIITGPNTGGKTVALKTVGLFALMNQSGLALPSGEGTALPVFDGIYA 435
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQSLSQSLSTFS H+ I I + T +SLVLLDE+G+GT+P EG+A+ M++L+
Sbjct: 436 DIGDEQSLSQSLSTFSAHMTNIAAITASVTGRSLVLLDELGSGTDPEEGSAIAMAILDYL 495
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E L + TTHHG LK Y+ + ENA ++FD L PTY+I+ GVPG S A++IA
Sbjct: 496 IEKKVRLLV-TTHHGMLKNYGYTREGVENASVDFDSRTLSPTYRIVMGVPGESRAVDIAA 554
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVI 605
R GLP +V+ AR A+++ +I
Sbjct: 555 RNGLPEAMVRGARGYLAEERADVSALI 581
>gi|169832578|ref|YP_001693914.1| MutS2 family protein [Streptococcus pneumoniae Hungary19A-6]
gi|238688319|sp|B1I9K1.1|MUTS2_STRPI RecName: Full=MutS2 protein
gi|168995080|gb|ACA35692.1| MutS2 family protein [Streptococcus pneumoniae Hungary19A-6]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|225853982|ref|YP_002735494.1| MutS2 family protein [Streptococcus pneumoniae JJA]
gi|254766605|sp|C1CCH3.1|MUTS2_STRZJ RecName: Full=MutS2 protein
gi|225723641|gb|ACO19494.1| MutS2 family protein [Streptococcus pneumoniae JJA]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|182683375|ref|YP_001835122.1| mutS2 family protein [Streptococcus pneumoniae CGSP14]
gi|303255387|ref|ZP_07341453.1| mutS2 family protein [Streptococcus pneumoniae BS455]
gi|303259484|ref|ZP_07345461.1| mutS2 family protein [Streptococcus pneumoniae SP-BS293]
gi|303262347|ref|ZP_07348290.1| mutS2 family protein [Streptococcus pneumoniae SP14-BS292]
gi|303264765|ref|ZP_07350682.1| mutS2 family protein [Streptococcus pneumoniae BS397]
gi|303266604|ref|ZP_07352489.1| mutS2 family protein [Streptococcus pneumoniae BS457]
gi|303268837|ref|ZP_07354624.1| mutS2 family protein [Streptococcus pneumoniae BS458]
gi|387758730|ref|YP_006065708.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
INV200]
gi|418109384|ref|ZP_12746413.1| mutS2 family protein [Streptococcus pneumoniae GA49447]
gi|418138743|ref|ZP_12775575.1| mutS2 family protein [Streptococcus pneumoniae GA13338]
gi|418179785|ref|ZP_12816360.1| mutS2 family protein [Streptococcus pneumoniae GA41688]
gi|418199151|ref|ZP_12835600.1| mutS2 family protein [Streptococcus pneumoniae GA47976]
gi|419422501|ref|ZP_13962720.1| MutS2 family protein [Streptococcus pneumoniae GA43264]
gi|419514003|ref|ZP_14053631.1| MutS2 family protein [Streptococcus pneumoniae England14-9]
gi|421267631|ref|ZP_15718505.1| mutS2 family protein [Streptococcus pneumoniae SPAR95]
gi|421295673|ref|ZP_15746388.1| mutS2 protein [Streptococcus pneumoniae GA58581]
gi|238691130|sp|B2ILV2.1|MUTS2_STRPS RecName: Full=MutS2 protein
gi|182628709|gb|ACB89657.1| mutS2 family protein [Streptococcus pneumoniae CGSP14]
gi|301801319|emb|CBW34002.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
INV200]
gi|302597632|gb|EFL64712.1| mutS2 family protein [Streptococcus pneumoniae BS455]
gi|302636446|gb|EFL66938.1| mutS2 family protein [Streptococcus pneumoniae SP14-BS292]
gi|302639418|gb|EFL69876.1| mutS2 family protein [Streptococcus pneumoniae SP-BS293]
gi|302641618|gb|EFL71978.1| mutS2 family protein [Streptococcus pneumoniae BS458]
gi|302643848|gb|EFL74110.1| mutS2 family protein [Streptococcus pneumoniae BS457]
gi|302645632|gb|EFL75862.1| mutS2 family protein [Streptococcus pneumoniae BS397]
gi|353784677|gb|EHD65097.1| mutS2 family protein [Streptococcus pneumoniae GA49447]
gi|353847207|gb|EHE27234.1| mutS2 family protein [Streptococcus pneumoniae GA41688]
gi|353866739|gb|EHE46635.1| mutS2 family protein [Streptococcus pneumoniae GA47976]
gi|353906450|gb|EHE81854.1| mutS2 family protein [Streptococcus pneumoniae GA13338]
gi|379589832|gb|EHZ54671.1| MutS2 family protein [Streptococcus pneumoniae GA43264]
gi|379638493|gb|EIA03038.1| MutS2 family protein [Streptococcus pneumoniae England14-9]
gi|395871637|gb|EJG82740.1| mutS2 family protein [Streptococcus pneumoniae SPAR95]
gi|395897742|gb|EJH08701.1| mutS2 protein [Streptococcus pneumoniae GA58581]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|149012158|ref|ZP_01833267.1| MutS2 family protein [Streptococcus pneumoniae SP19-BS75]
gi|147763760|gb|EDK70694.1| MutS2 family protein [Streptococcus pneumoniae SP19-BS75]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|418145644|ref|ZP_12782430.1| mutS2 family protein [Streptococcus pneumoniae GA13637]
gi|353816518|gb|EHD96727.1| mutS2 family protein [Streptococcus pneumoniae GA13637]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|148988159|ref|ZP_01819622.1| MutS2 family protein [Streptococcus pneumoniae SP6-BS73]
gi|421210405|ref|ZP_15667395.1| mutS2 protein [Streptococcus pneumoniae 2070035]
gi|421231218|ref|ZP_15687867.1| mutS2 protein [Streptococcus pneumoniae 2080076]
gi|147926623|gb|EDK77696.1| MutS2 family protein [Streptococcus pneumoniae SP6-BS73]
gi|395575280|gb|EJG35849.1| mutS2 protein [Streptococcus pneumoniae 2070035]
gi|395597020|gb|EJG57228.1| mutS2 protein [Streptococcus pneumoniae 2080076]
Length = 778
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|418075516|ref|ZP_12712758.1| mutS2 family protein [Streptococcus pneumoniae GA47502]
gi|353751530|gb|EHD32162.1| mutS2 family protein [Streptococcus pneumoniae GA47502]
Length = 778
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRVLKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|227534485|ref|ZP_03964534.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187884|gb|EEI67951.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 786
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 224/396 (56%), Gaps = 49/396 (12%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI + K + +VITGPNTGGKTI LKT+GL +M +SGL I + + +++ FD VFADIG
Sbjct: 319 DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIG 378
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+ Q + SLVL DE+GAGT+P EG AL +++L+A E
Sbjct: 379 DEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEV 438
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK Y+ NA MEFD L+PTY++L GVPGRS+A +I+ RLG
Sbjct: 439 GAYV-VATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLG 497
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
LP ++V+ A+ + + S E+N +I ++E+ + AR L ++++H L +
Sbjct: 498 LPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYK 557
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
K ++R ++Q+ D A +LV K+ ++ K +QLR
Sbjct: 558 KF----TTERDAQLQQAKDK---ANTLVDKT-----------QTKADKIIKQLR-----Q 594
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP---------RVKRTELP 752
+ T G TV E+ A+ + +K + Q R + +
Sbjct: 595 MQLTNPG-------------TVK--ENQLIAAKTALKQLHQDEPLQKNRILRREREKQAL 639
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+VGD V V+S+ + GT+++ + K+ VQ+G +K
Sbjct: 640 HVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKM 674
>gi|302380376|ref|ZP_07268846.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
gi|302311866|gb|EFK93877.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
Length = 783
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I++ LVITGPNTGGKT+ LKTVGL +MA+SG+ I E ++V FD++F
Sbjct: 316 VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFT 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I++ T SLVL DE+GAGT+P EG AL +++L F
Sbjct: 376 DIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
S+ TIATTH+ +LK + + +N +EFD L PTYK+ G+PG+S+A I+
Sbjct: 436 LYK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
RLGL ++ NA+++ + +V+ ++E K Q E
Sbjct: 495 RLGLDDDIINNAKEILSQEDKDFEDVLSDIESKKKQIDE 533
>gi|148983804|ref|ZP_01817123.1| MutS2 family protein [Streptococcus pneumoniae SP3-BS71]
gi|387756918|ref|YP_006063897.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
OXC141]
gi|418231524|ref|ZP_12858112.1| mutS2 family protein [Streptococcus pneumoniae GA07228]
gi|418235822|ref|ZP_12862391.1| mutS2 family protein [Streptococcus pneumoniae GA19690]
gi|419479282|ref|ZP_14019094.1| MutS2 family protein [Streptococcus pneumoniae GA19101]
gi|419498977|ref|ZP_14038677.1| MutS2 family protein [Streptococcus pneumoniae GA47597]
gi|147923951|gb|EDK75063.1| MutS2 family protein [Streptococcus pneumoniae SP3-BS71]
gi|301799507|emb|CBW32054.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
OXC141]
gi|353887830|gb|EHE67606.1| mutS2 family protein [Streptococcus pneumoniae GA07228]
gi|353893751|gb|EHE73496.1| mutS2 family protein [Streptococcus pneumoniae GA19690]
gi|379574105|gb|EHZ39051.1| MutS2 family protein [Streptococcus pneumoniae GA19101]
gi|379603865|gb|EHZ68633.1| MutS2 family protein [Streptococcus pneumoniae GA47597]
gi|429317352|emb|CCP37119.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
SPN034156]
gi|429318893|emb|CCP32110.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
SPN034183]
gi|429320706|emb|CCP34083.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
SPN994039]
gi|429322526|emb|CCP30124.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
SPN994038]
Length = 778
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRVLKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|15900325|ref|NP_344929.1| MutS2 family protein [Streptococcus pneumoniae TIGR4]
gi|111657626|ref|ZP_01408360.1| hypothetical protein SpneT_02001180 [Streptococcus pneumoniae
TIGR4]
gi|421246659|ref|ZP_15703148.1| mutS2 protein [Streptococcus pneumoniae 2082170]
gi|81775691|sp|Q97SG5.1|MUTS2_STRPN RecName: Full=MutS2 protein
gi|14971874|gb|AAK74569.1| MutS2 family protein [Streptococcus pneumoniae TIGR4]
gi|395615853|gb|EJG75868.1| mutS2 protein [Streptococcus pneumoniae 2082170]
Length = 778
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|421205876|ref|ZP_15662941.1| mutS2 protein [Streptococcus pneumoniae 2090008]
gi|421229086|ref|ZP_15685763.1| mutS2 protein [Streptococcus pneumoniae 2061376]
gi|421291204|ref|ZP_15741947.1| mutS2 protein [Streptococcus pneumoniae GA56348]
gi|421311172|ref|ZP_15761784.1| mutS2 protein [Streptococcus pneumoniae GA58981]
gi|395577527|gb|EJG38066.1| mutS2 protein [Streptococcus pneumoniae 2090008]
gi|395598071|gb|EJG58276.1| mutS2 protein [Streptococcus pneumoniae 2061376]
gi|395895924|gb|EJH06893.1| mutS2 protein [Streptococcus pneumoniae GA56348]
gi|395913551|gb|EJH24403.1| mutS2 protein [Streptococcus pneumoniae GA58981]
Length = 778
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 209/391 (53%), Gaps = 50/391 (12%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSA--SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+H ++ QL+P + K+ + L+ N
Sbjct: 586 ------LHSKS-QLKPHEIIEAKVKLKKLAPEKVDLSKN--------------------- 617
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
K + K+ P VGD + V S+G++GT+
Sbjct: 618 --KVLQKAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|417693350|ref|ZP_12342539.1| mutS2 family protein [Streptococcus pneumoniae GA47901]
gi|332204433|gb|EGJ18498.1| mutS2 family protein [Streptococcus pneumoniae GA47901]
Length = 777
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|303233786|ref|ZP_07320440.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
gi|302495220|gb|EFL54972.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
Length = 783
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I++ LVITGPNTGGKT+ LKTVGL +MA+SG+ I E ++V FD++F
Sbjct: 316 VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFT 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I++ T SLVL DE+GAGT+P EG AL +++L F
Sbjct: 376 DIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
S+ TIATTH+ +LK + + +N +EFD L PTYK+ G+PG+S+A I+
Sbjct: 436 LYK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
RLGL ++ NA+++ + +V+ ++E K Q E
Sbjct: 495 RLGLDDDIINNAKEILSQEDKDFEDVLSDIESKKKQIDE 533
>gi|169824561|ref|YP_001692172.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687754|sp|B0S1P2.1|MUTS2_FINM2 RecName: Full=MutS2 protein
gi|167831366|dbj|BAG08282.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 783
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I++ LVITGPNTGGKT+ LKTVGL +MA+SG+ I E ++V FD++F
Sbjct: 316 VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFT 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I++ T SLVL DE+GAGT+P EG AL +++L F
Sbjct: 376 DIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
S+ TIATTH+ +LK + + +N +EFD L PTYK+ G+PG+S+A I+
Sbjct: 436 LYK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
RLGL ++ NA+++ + +V+ ++E K Q E
Sbjct: 495 RLGLDDDIINNAKEILSQEDKDFEDVLSDIESKKKQIDE 533
>gi|417926121|ref|ZP_12569532.1| recombination and DNA strand exchange inhibitor protein [Finegoldia
magna SY403409CC001050417]
gi|341590342|gb|EGS33586.1| recombination and DNA strand exchange inhibitor protein [Finegoldia
magna SY403409CC001050417]
Length = 783
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I++ LVITGPNTGGKT+ LKTVGL +MA+SG+ I E ++V FD++F
Sbjct: 316 VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLITLMAQSGILIPVDENSEVAIFDNIFT 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+K I +I++ T SLVL DE+GAGT+P EG AL +++L F
Sbjct: 376 DIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLVLFDELGAGTDPTEGAALAIAILRIF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
S+ TIATTH+ +LK + + +N +EFD L PTYK+ G+PG+S+A I+
Sbjct: 436 LYK-SIRTIATTHYSQLKIFALTEKYVKNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISR 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
RLGL ++ NA+++ + +V+ ++E K Q E
Sbjct: 495 RLGLDDDIINNAKEILSQEDKDFEDVLSDIESKKKQIDE 533
>gi|410658584|ref|YP_006910955.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|410661571|ref|YP_006913942.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
gi|409020939|gb|AFV02970.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|409023927|gb|AFV05957.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
Length = 796
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 216/400 (54%), Gaps = 36/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI + + + L+ITGPNTGGKT+ LKT+GL +M +SGLHI + +++ F +F
Sbjct: 323 VPISVGLGMDDQFLIITGPNTGGKTVTLKTIGLMAVMMQSGLHIPAESDSRLGIFTRIFV 382
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I ++ S+SLVLLDE+GAGT+P EG AL M++L
Sbjct: 383 DIGDEQSVEQSLSTFSAHMTNIVDITREADSRSLVLLDELGAGTDPGEGAALAMAILAEL 442
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E GS +ATTH+G LKT Y+ ENA +EF+ LKPTY++L G+PGRS+A+ IA+
Sbjct: 443 LERGS-CGVATTHYGALKTFAYNTPGVENASVEFNPETLKPTYRLLTGIPGRSNALAIAQ 501
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ AR I E + ++ LE++ + + + L K +
Sbjct: 502 RLGLGSSILEKARSF-----------ISERDTKESDLLENLEDTQREI----ELKKRSVE 546
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+K EH A++ +K ++ + ++ K+ ++ QAR ++++ +
Sbjct: 547 EEQKKAEHKAAELKKKNLELEEK---YEDIMRKAKEEAVDVVRQARLEAEGIIKEIKEAQ 603
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN---VG 755
+ Q+ ++K S V + + + + K P G
Sbjct: 604 KKE--------------RREQEAALEKTRQGLKKLSEKVYETEYTGKNKSGPKPGQVEPG 649
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V++ + +KG V++ + E++VQ G +K + ++I
Sbjct: 650 QTVYMPNLRQKGQVLQKPDNNNEVLVQTGILKVSVPLSEI 689
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 178 QMLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVI 232
Q + + +D ++RN + + + + ++S R + + S F G++ S+SG I
Sbjct: 172 QRIKESLDGILRNPSYQKMLQDNVITSRGDRYVVPIKMEYSSAFPGIVHDQSASGATLFI 231
Query: 233 EPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATY 292
EP++ V L +EL++ + + +L LT K+ + EI + +I+LD + A+A
Sbjct: 232 EPMAVVQLGNELREITLKENREVQKILQQLTAKVTARIPEILLLNEALIKLDFILAKARL 291
Query: 293 SLSFGGTSPNIFLPQDMK 310
S SP + Q++K
Sbjct: 292 SEDMEAGSPLVMNKQEVK 309
>gi|417001937|ref|ZP_11941410.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479647|gb|EGC82739.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 781
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 219/403 (54%), Gaps = 41/403 (10%)
Query: 394 ELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEY 447
E HP VPID+ I L+ITGPNTGGKT+ LKTVGL MA++GL I + E
Sbjct: 301 EARHPLLSGKVVPIDVRIGGSYTTLIITGPNTGGKTVSLKTVGLISAMAQTGLFIPADEG 360
Query: 448 AKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEG 507
++V FD +F DIGD QS+ SLSTFS L I I+ ++T +SLVLLDEIG+GT+P+EG
Sbjct: 361 SRVSVFDDIFVDIGDTQSIEMSLSTFSASLTNIVEILKKATDKSLVLLDEIGSGTDPVEG 420
Query: 508 TALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGV 567
AL +S+L + + ++T TTH+ ELK NA +EFD L PTYK+ G
Sbjct: 421 AALAISILNSLTKK-EVMTFTTTHYSELKYYAVETPGVMNASVEFDVDTLSPTYKLEIGT 479
Query: 568 PGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLM 627
PG+S+A I++RLGLP ++++A+ L G + IN+++ E+E K + E +
Sbjct: 480 PGKSNAFEISKRLGLPVEILKDAKDLIGEDNRNINKILEEIEEDKKEIESKNKEIDDY-- 537
Query: 628 LSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLV 687
K + R R ++ E S ++ I +A A ++ K+
Sbjct: 538 -----KKEIARIRNELKEKSKSLSRKEEDIIREAEDKANKILDKA--------------- 577
Query: 688 HKRAQQLRPSA--SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR 745
+KR+Q + A S++ + + + ++ + + +N+++ +++ + +K K +P+
Sbjct: 578 NKRSQDMLKEAKRSRNANTSDIDRSLNKIRTNYKEGRIER-----QGENLSLKQSKNAPK 632
Query: 746 VKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
+ VGD+V ++ ++ VI+ K I VQ+G +K
Sbjct: 633 TLK-----VGDMVLIAGLNEEAQVIEAPDHKGNIKVQMGILKM 670
>gi|15615668|ref|NP_243972.1| recombination and DNA strand exchange inhibitor protein [Bacillus
halodurans C-125]
gi|20139206|sp|Q9K8A0.1|MUTS2_BACHD RecName: Full=MutS2 protein
gi|10175728|dbj|BAB06825.1| DNA mismatch repair protein [Bacillus halodurans C-125]
Length = 785
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 219/400 (54%), Gaps = 38/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + LVITGPNTGGKT+ LKT+GL +MA+SGLH+ + E +++ F VFA
Sbjct: 318 VPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGLHVPAEEESELAVFKHVFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I+ + +SLVL DE+GAGT+P EG AL +++L+
Sbjct: 378 DIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGAGTDPTEGAALAIAILDDV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTY++L GVPGRS+A I++
Sbjct: 438 YRRGARI-VATTHYSELKGYAYNREGVMNASVEFDVETLSPTYRLLIGVPGRSNAFAISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +++ A+ ++++ +I +E+ + EA L + L +L
Sbjct: 497 RLGLEEKIIEQAKAHIDEDASQVESMIASLEQSQKSAESDWEEAEKALQEAEQLRLDL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+K L+ ++ R I ++ Q + + +A ++ +LR
Sbjct: 555 --QKKLDDLEKEKER----------ILAEAEQQAEQAVKDAKEEAEVII----SELRDLQ 598
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKD---IKQSPRVKRTELPNVG 755
Q + + +D +H A+ + K +K++ KR P G
Sbjct: 599 KQGVSVK-------------EHQIIDAKKHLEEAAPKLTKQQKKVKRTAEKKREFKP--G 643
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V SFG+KG +++ + S+ E VQ+G MK ++ +D+
Sbjct: 644 DEVKVLSFGQKGHIVE-KVSEAEYQVQMGIMKMKVEASDL 682
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
+F G++ S+SG +EP + V +N++L++A+A + E +L L+ ++ +D++
Sbjct: 208 AFGGIVHDQSASGATLFVEPQAVVEINNQLREAKAKEQREIERILSELSMQVSEHVDDLF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSP 301
++ + +LD + ARA Y + T P
Sbjct: 268 VNVDVLAELDFIMARAHYGKAIRATQP 294
>gi|414157952|ref|ZP_11414246.1| MutS2 protein [Streptococcus sp. F0441]
gi|410870497|gb|EKS18454.1| MutS2 protein [Streptococcus sp. F0441]
Length = 778
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|417090662|ref|ZP_11956028.1| DNA mismatch repair protein [Streptococcus suis R61]
gi|353533437|gb|EHC03091.1| DNA mismatch repair protein [Streptococcus suis R61]
Length = 777
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 5/223 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
+A PVP D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL+ + ++V F
Sbjct: 307 IAKPVPNDLYFGSQLTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFK 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I+ + SL+L DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHTVEILRVADQDSLILFDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ G + T+ATTH+ ELK ENA MEFD L+PTYK + GVPGRS+A
Sbjct: 427 LDDLRLRG-IKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 617
IA RLGL I++Q+A Q + +++N +I E+ ++Q +E
Sbjct: 486 EIARRLGLSDIIIQSA-QSWTDTDSDVNRII---EKLESQTVE 524
>gi|419778010|ref|ZP_14303912.1| MutS2 family protein [Streptococcus oralis SK10]
gi|383187763|gb|EIC80207.1| MutS2 family protein [Streptococcus oralis SK10]
Length = 778
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALNESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|320162401|ref|YP_004175626.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
gi|319996255|dbj|BAJ65026.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
Length = 808
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 282/613 (46%), Gaps = 129/613 (21%)
Query: 200 VSSIHGRLCIRTGADQLSFKGLLLS------SSGIGSVIEPLSAVPLNDELQQARASVTK 253
++ +GR I A+ FKG + S SSG +EPL+ V LN+E + + V
Sbjct: 187 ITQRNGRYVIPLRAE---FKGQVRSIIHDQSSSGATLFVEPLAVVDLNNEWHELQLRVRD 243
Query: 254 AEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSL 313
E +L L++++ + + + + + D A A Y+ +D++ S
Sbjct: 244 EERRILAELSDQVGAHFEALAALTEALARFDFALACAKYA-------------EDLRAS- 289
Query: 314 THEPVTSKVSSSERE----WTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLY 369
EPV + R TI L +A HPL
Sbjct: 290 --EPVLVRYRHPARPDHPGSTIRLIQARHPL----------------------------- 318
Query: 370 GGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTV 429
L P + VPID+ + T +VITGPNTGGKT+ LKTV
Sbjct: 319 -------------LDPQTV----------VPIDVDLDEDTFCVVITGPNTGGKTVTLKTV 355
Query: 430 GLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTS 489
GL +MA+SGLHI + +++ F++VFADIGDEQS+ QSLSTFSGH+K I I+ ++ +
Sbjct: 356 GLLALMAQSGLHIPARSGSELSVFENVFADIGDEQSIEQSLSTFSGHIKNISRILRRANT 415
Query: 490 QSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENAC 549
+LVL DE+GAGT+P EG AL ++L E IA TH+ ELK ++ NA
Sbjct: 416 HTLVLFDELGAGTDPQEGAALARAILAHMVEKRIPCLIA-THYPELKIFAHNTPGVINAS 474
Query: 550 MEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEME 609
MEFD L+PTY + G+PGRS+A+ IA RLGL ++++ AR AEI+ + E
Sbjct: 475 MEFDLNTLRPTYHLTLGLPGRSNALAIASRLGLDPVIIEKAR-------AEISPEELRAE 527
Query: 610 RFKTQFLEHVHEARHFLMLSRNL----HKNLLRTRRKI---LEHCASQRFRKVQKISDAA 662
L +H R +R + + R R ++ LE +R R ++K+ + A
Sbjct: 528 ----NLLNEIHRQRDAARRARERAEKEQREVERLRAELAARLEKIEEERQRLLEKVREEA 583
Query: 663 AIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTT 722
+ + +++ +AR + + L+P +S + + V T +TT
Sbjct: 584 EQEAEALRREVEEVRRQLMRARQPL----EALQPLREKSEALVENARTALVSTPAAGETT 639
Query: 723 VDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQ 782
+ +HP A GD V V S G +G + + +E+ VQ
Sbjct: 640 LPP-QHPFRA----------------------GDKVRVRSLGMQGVITAL--GEEDAEVQ 674
Query: 783 VGNMKWIMKFTDI 795
VGN++ + +D+
Sbjct: 675 VGNLRVRARLSDL 687
>gi|392988863|ref|YP_006487456.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
gi|392336283|gb|AFM70565.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
Length = 786
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 155/240 (64%), Gaps = 1/240 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I ++ + +VITGPNTGGKTI LKT+GL +M +SGL I E +++ F+ VFADIG
Sbjct: 320 DISIGKEYQAIVITGPNTGGKTITLKTLGLLQLMGQSGLPIPVDEESQIGIFEEVFADIG 379
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ QSLSTFS H+ +I++ +SLVL DE+GAGT+P EG AL +++L+ +
Sbjct: 380 DEQSIEQSLSTFSSHMTNTVDILAHVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKK 439
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
S +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 440 -SAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLG 498
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L V+ A+QL S ++NE+I ++E + E RH++ ++ L++NL R
Sbjct: 499 LDQSVINEAKQLMNDESQDLNEMIADLENRRKMAETEYLEMRHYVDEAQELYENLKEAYR 558
>gi|307708234|ref|ZP_07644701.1| MutS2 family protein [Streptococcus mitis NCTC 12261]
gi|307615680|gb|EFN94886.1| MutS2 family protein [Streptococcus mitis NCTC 12261]
Length = 778
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 215/390 (55%), Gaps = 46/390 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTVI 770
+ K+ P VGD + V S+G++GT+I
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTLI 647
>gi|306825813|ref|ZP_07459152.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432174|gb|EFM35151.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 778
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|291087888|ref|ZP_06347777.2| MutS2 protein [Clostridium sp. M62/1]
gi|291073610|gb|EFE10974.1| MutS2 family protein [Clostridium sp. M62/1]
Length = 818
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 214/402 (53%), Gaps = 39/402 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI+I++ +L++TGPNTGGKT+ LKTVGL +M ++GLHI + + +++ FD+VFA
Sbjct: 317 VPINIYLGDSFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I++++ S SL L DE+GAGT+P EG AL +++L F
Sbjct: 377 DIGDEQSIEQSLSTFSAHMTNIVSILNEADSNSLCLFDELGAGTDPTEGAALAVAVL-TF 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ T+ATTH+ ELK + ENAC EF L+PTY++L G+PG+S+A I++
Sbjct: 436 LHNMQCRTMATTHYSELKVFALTEPGVENACCEFSVETLRPTYRLLIGIPGKSNAFAISK 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP ++++A++ A +++ +E + + E + L + L +
Sbjct: 496 KLGLPDYIIEDAKRHIEKEDAAFEDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQ 555
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
E Q+ R ++K AR K Q +A ++K A Q
Sbjct: 556 KE----ERFQDQKERLLEK-------AREEAQKILQDAKDTADSTIRNINKLANQ----- 599
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTT--VDKVEHPATASSSVVKDIKQSPRVKRTELPN--- 753
+ GK S + VDK P Q+PR +T P
Sbjct: 600 ------SGAGKELEEQRSKLRNKIKDVDKKLAPKKP---------QAPR--KTISPKSLK 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+GD V V S KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 643 IGDGVKVLSMNLKGTVSSLPNAKGDLYVQMGILRSLVNIRDL 684
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 205 GRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ + G++ S GS IEP++ + LN+E+++ + E VL+A
Sbjct: 194 GRYCLPVKAEHKNQVPGMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMA 253
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
L+ ++ + + + L+ + +LD + A+A+ S F T P
Sbjct: 254 LSSQLVPYTETLAENLSILARLDFIFAKASLSRHFNCTEP 293
>gi|398306013|ref|ZP_10509599.1| recombination and DNA strand exchange inhibitor protein [Bacillus
vallismortis DV1-F-3]
Length = 785
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 281/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTE+ +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEQTAEHTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
+ L+ + LD + A+A Y+ + T P L D + L
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKP---LMND-------------------SGFVRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL P+E V+
Sbjct: 306 KARHPLL-------------------------------------------PAEQVVAN-- 320
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
DI + +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 321 -------DIELGGDFSTMVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETEAIRREADKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAATKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RSI-----------KQEHRSFKDHELINAKKRLEGAVPTFEKSKKPEKPKTQKRNFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGSEWNVQIGILKMKVKEKDL 681
>gi|406577109|ref|ZP_11052728.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD6S]
gi|404460371|gb|EKA06640.1| putative DNA mismatch repair protein, MutS2 family protein
[Streptococcus sp. GMD6S]
Length = 778
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|116333827|ref|YP_795354.1| MutS family ATPase [Lactobacillus brevis ATCC 367]
gi|122269486|sp|Q03R49.1|MUTS2_LACBA RecName: Full=MutS2 protein
gi|116099174|gb|ABJ64323.1| MutS family ATPase [Lactobacillus brevis ATCC 367]
Length = 787
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 174/291 (59%), Gaps = 15/291 (5%)
Query: 389 QVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
QV+ + HP V DI I R + +++TGPNTGGKTI LKT+ L +M +SGL
Sbjct: 300 QVNLRQARHPLIDPKKVVANDITIGRDYKTIIVTGPNTGGKTITLKTLALVQLMGQSGLF 359
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
I ++E + + FD +FADIGDEQS+ QSLSTFSGH++ I I+ Q+ +SL+++DE+GAG
Sbjct: 360 IPANENSVIGIFDDIFADIGDEQSIEQSLSTFSGHMENIVAILRQADERSLIVVDELGAG 419
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +++L+ GS + +A+TH+ ELK Y+ NA MEFD L+PTY
Sbjct: 420 TDPQEGAALAIAILDQMGTLGSYV-MASTHYPELKAYGYNRPETINASMEFDGETLQPTY 478
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+L G+PGRS+A++IA RLG+P VV AR L S ++N +I ++ K
Sbjct: 479 HLLIGIPGRSNALDIAARLGMPEQVVAAARGLTDQDSQDLNAMISDLTEQKRHADADAER 538
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKS 672
R L + LH L + + + +K Q ++DA A LV +S
Sbjct: 539 LRQELAEADELHAQLKK-------QFDAYQHQKDQLMTDAKREANRLVDES 582
>gi|402835332|ref|ZP_10883901.1| MutS2 family protein [Mogibacterium sp. CM50]
gi|402274829|gb|EJU24000.1| MutS2 family protein [Mogibacterium sp. CM50]
Length = 791
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 208/398 (52%), Gaps = 30/398 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + L+ITGPNTGGKT+ LKT+GL ++M +SGLHI E +++P F VFA
Sbjct: 315 VPIDVSLGEDYDTLLITGPNTGGKTVTLKTIGLFILMTESGLHIPCCEESRIPIFRDVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
+IGDEQS+ +LSTFS H+ +II+ + + SLVLLDEIG+GT+P EG ALG+++LE
Sbjct: 375 EIGDEQSIENNLSTFSSHMLNTADIIANADANSLVLLDEIGSGTDPAEGAALGIAMLEVL 434
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK S + ENA MEFD L PTYKI G+PG+S+A I+
Sbjct: 435 KTKGAHI-VATTHYTELKKYALSTEGVENASMEFDMETLSPTYKIKIGLPGKSNAFEISR 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGL ++ A L +NE IE E ++ + A L + + R
Sbjct: 494 KLGLDSAIIDRAISL-------MNENDIEFEGAVSRVEADQNRADEVLARAEAMEAEANR 546
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
E A+ + K + I A AR ++ S A V + +++LR +A
Sbjct: 547 KLMDAEEKLAAAKDSKRRIIESAKEEARDII-----------SDANRTVKEVSKELRKAA 595
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
++ N + ++ +K A A K++K S K EL G +
Sbjct: 596 KENRD------NSSAAVAESKRKLREKYIKNAAAP----KEVKNSNVPKAEELKR-GTRI 644
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+ G+ G V + + V++G +K K D+V
Sbjct: 645 KLLKLGQNGEVETPPDASGSLTVRIGALKMGAKLKDVV 682
>gi|421276932|ref|ZP_15727752.1| mutS2 protein [Streptococcus mitis SPAR10]
gi|395876213|gb|EJG87289.1| mutS2 protein [Streptococcus mitis SPAR10]
Length = 778
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 387 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
+ ++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL
Sbjct: 294 DQEIQLLHVRHPLVQNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLP 353
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
IL+ + ++V F+ VFADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAG
Sbjct: 354 ILADKGSRVGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQNSLLLLDELGAG 413
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL MS+LE + T+ATTH+ ELK + +NA MEFD L+PTY
Sbjct: 414 TDPQEGAALAMSILEDL-RLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTY 472
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+ + GVPGRS+A IA+RLGL ++V G AS +IN+ ++ R Q E E
Sbjct: 473 RFMQGVPGRSNAFEIAKRLGLSDVIV-------GDASKQINQD-NDVNRIIEQLEEQTLE 524
Query: 622 ARHFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
+R L R + + L+ R K+ ++ ++ K + AA L + +
Sbjct: 525 SRKRLENIRQVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDLALAESDDILK 584
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+ +H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 585 N-------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ 621
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ------KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|419503261|ref|ZP_14042937.1| MutS2 family protein [Streptococcus pneumoniae GA47760]
gi|379610635|gb|EHZ75366.1| MutS2 family protein [Streptococcus pneumoniae GA47760]
Length = 778
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + E+N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-EVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|424834848|ref|ZP_18259539.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
gi|365978409|gb|EHN14489.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
Length = 788
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
V +E HP VPI + + + L+ITGPNTGGKT+ LKTVGL +MA SGL I
Sbjct: 299 VDIIEGRHPLIDRRQVVPISVKLGDEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + + +F++VFADIGDEQS+ QSLSTFS H+K I +I+ ++ SLVL DE+GAGT
Sbjct: 359 PARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVDIMDKADENSLVLFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + GS + IATTH+ ELK + ENA +EFD L+PTY+
Sbjct: 419 DPTEGAALAISILENLRKRGSKI-IATTHYSELKAYALRKEGVENASVEFDVETLRPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+L G+PG+S+A I++RLGLP ++ AR+ + E+I + + + ++ +A
Sbjct: 478 LLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELI---QNLQEKSIKAQEDA 534
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
R L+ N L+ R + ++ +QK+ D A + + A+ + A +
Sbjct: 535 R----LAEN-----LKLERDKEKKKYEEKLEGLQKVRDNAFMD---ARREAKNIIREAKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K +QL S K+ + + L ++++ E +K++K+
Sbjct: 583 EADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLD--SIEEKEIKTVHKGEALKNVKE 640
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V + S +K V+ +K +++VQ G MK D+
Sbjct: 641 ------------GDEVLLVSINQKVIVLSKPDNKGDVLVQAGIMKITANIKDL 681
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
SS+G IEP+S V LN+E+++ E +L L+ K+ ++ ++ N + +L
Sbjct: 214 SSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSSKINANITGVKTDANIVWEL 273
Query: 284 DVVNARATYSLSFGGTSPNI 303
D + A+A ++ + T P I
Sbjct: 274 DFIFAKAKFASEYNCTCPTI 293
>gi|251795420|ref|YP_003010151.1| MutS2 family protein [Paenibacillus sp. JDR-2]
gi|247543046|gb|ACT00065.1| MutS2 family protein [Paenibacillus sp. JDR-2]
Length = 789
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 213/397 (53%), Gaps = 31/397 (7%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+D+ + + +++TGPNTGGKT+ LKTVGL +MA SGL + + E +++ FDS++A
Sbjct: 317 VPLDVELGNQFTAIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPADEGSQLCVFDSIYA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+ TS+SLVLLDE+GAGT+P EG+AL +++LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIIRILGSMTSKSLVLLDELGAGTDPAEGSALAIAILEHI 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ S + IATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A IAE
Sbjct: 437 HKLDSRI-IATTHYSELKAYAYNRKGVINASMEFDVATLSPTYRLLVGVPGRSNAFAIAE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL ++ +AR EV E +R + + + E R LS +N
Sbjct: 496 RLGLSQAIIDHAR----------GEVSEEDQRVEN-MIASLEEDR----LSAESERNTAE 540
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+ R+ +E +QR R ++ ++ K+ ++ + ++AR + LR A
Sbjct: 541 SMRREME---AQRKRHEAELERFEEQRDKMLQKAQEEAHEAVAKARREADQIIADLRKLA 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
+ K +H L ++ E S K+ ++ GD V
Sbjct: 598 LEEGASVK----EHKLIEAKRRLEEAAPELATKKKRSAGGGAKKPAKI------GAGDEV 647
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V S +KG V ++ S + VQ+G MK + D+
Sbjct: 648 MVYSLNQKGIVAEIGAS--DATVQLGIMKMKVALDDL 682
>gi|405761437|ref|YP_006702033.1| DNA mismatch repair protein [Streptococcus pneumoniae SPNA45]
gi|404278326|emb|CCM08931.1| putative DNA mismatch repair protein [Streptococcus pneumoniae
SPNA45]
Length = 778
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 214/386 (55%), Gaps = 40/386 (10%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E + + + R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLEEQTLESCKRLDNIR 533
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
+ NL N R +K+ ++ ++ K + AA + + Q+ +
Sbjct: 534 E--VEQENLKMN--RALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN---- 585
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ---LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ----- 621
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 -KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|419707642|ref|ZP_14235124.1| MutS2 protein [Streptococcus salivarius PS4]
gi|383282642|gb|EIC80624.1| MutS2 protein [Streptococcus salivarius PS4]
Length = 782
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 152/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLHFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|295090651|emb|CBK76758.1| MutS2 family protein [Clostridium cf. saccharolyticum K10]
Length = 816
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 214/402 (53%), Gaps = 39/402 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI+I++ +L++TGPNTGGKT+ LKTVGL +M ++GLHI + + +++ FD+VFA
Sbjct: 315 VPINIYLGDSFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFA 374
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I +I++++ S SL L DE+GAGT+P EG AL +++L F
Sbjct: 375 DIGDEQSIEQSLSTFSAHMTNIVSILNEADSNSLCLFDELGAGTDPTEGAALAVAVL-TF 433
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ T+ATTH+ ELK + ENAC EF L+PTY++L G+PG+S+A I++
Sbjct: 434 LHNMQCRTMATTHYSELKVFALTEPGVENACCEFSVETLRPTYRLLIGIPGKSNAFAISK 493
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP ++++A++ A +++ +E + + E + L + L +
Sbjct: 494 KLGLPDYIIEDAKRHIEKEDAAFEDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQ 553
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
E Q+ R ++K AR K Q +A ++K A Q
Sbjct: 554 KE----ERFQDQKERLLEK-------AREEAQKILQDAKDTADSTIRNINKLANQ----- 597
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTT--VDKVEHPATASSSVVKDIKQSPRVKRTELPN--- 753
+ GK S + VDK P Q+PR +T P
Sbjct: 598 ------SGAGKELEEQRSKLRNKIKDVDKKLAPKKP---------QAPR--KTISPKSLK 640
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+GD V V S KGTV + +K ++ VQ+G ++ ++ D+
Sbjct: 641 IGDGVKVLSMNLKGTVSSLPNAKGDLYVQMGILRSLVNIRDL 682
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 205 GRLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR C+ A+ + G++ S GS IEP++ + LN+E+++ + E VL+A
Sbjct: 192 GRYCLPVKAEHKNQVPGMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMA 251
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
L+ ++ + + + L+ + +LD + A+A+ S F T P
Sbjct: 252 LSSQLVPYTETLAENLSILARLDFIFAKASLSRHFNCTEP 291
>gi|417885123|ref|ZP_12529282.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
gi|341596419|gb|EGS39022.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
Length = 790
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 222/413 (53%), Gaps = 46/413 (11%)
Query: 383 LSPSEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMM 435
L ++ QV+ + HP V DI + + ++ITGPNTGGKTI LKT+G+ +M
Sbjct: 294 LLSADNQVNLRKAWHPLIARDQAVANDIKLGGDYQAVIITGPNTGGKTITLKTLGIIQLM 353
Query: 436 AKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLL 495
++GL I + E + + FD+VFADIGDEQSL Q+LSTFSGH+ + I+ Q T+ SLVLL
Sbjct: 354 GQAGLFIPAQEGSTIGVFDNVFADIGDEQSLEQNLSTFSGHMDNVKTILDQLTANSLVLL 413
Query: 496 DEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEV 555
DE+GAGT+P EG AL M++L+ + GSL+ I TTH+ ELK Y NA MEFD+
Sbjct: 414 DELGAGTDPKEGAALAMAILDEIGQRGSLVMI-TTHYPELKVYGYDRAKTINASMEFDQA 472
Query: 556 KLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF 615
L+PTY++L G+PGRS+ + IA+RLG+ ++ A+ L S ++N +I ++ + Q
Sbjct: 473 TLQPTYRLLLGIPGRSNGLEIAKRLGIGPAIISEAQSLVSDDSQDLNAMIGDLVEQRKQA 532
Query: 616 LEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQ 675
E + ++ + L + L+ QR + +++ AR ++ Q
Sbjct: 533 REESERLAKLVAQNQADQEEL----NQKLDRFNEQRDQLLER-------ARL---QANHQ 578
Query: 676 LCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSS 735
+ + +A ++H +QL + ++ Q L + Q ++P +S
Sbjct: 579 VAQAKRKADRIIH-HLRQLEIQQGAGVKENQLMDAQGALNALHQ-------DNPRLQHNS 630
Query: 736 VVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 788
V+K K+ + + GD V V S+G+ G E++ + GN KW
Sbjct: 631 VLKRAKEKHDLHK------GDAVLVKSYGQHG----------ELLSRRGNHKW 667
>gi|428280333|ref|YP_005562068.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
gi|291485290|dbj|BAI86365.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
Length = 785
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEYTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T +P+ + I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKAT----------------KPIMNDTG------FIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL P ++
Sbjct: 306 KARHPLL------------------------------------------PPDQV------ 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 318 ----VANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAMKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RTI-----------KEEHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKAQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|449095303|ref|YP_007427794.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
gi|449029218|gb|AGE64457.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
Length = 785
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEHTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T +P+ + I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKAT----------------KPIMNDTG------FIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL P ++
Sbjct: 306 KARHPLL------------------------------------------PPDQV------ 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 318 ----VANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAIKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RSI-----------KEEHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKAQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|335046580|ref|ZP_08539603.1| recombination and DNA strand exchange inhibitor protein
[Oribacterium sp. oral taxon 108 str. F0425]
gi|333760366|gb|EGL37923.1| recombination and DNA strand exchange inhibitor protein
[Oribacterium sp. oral taxon 108 str. F0425]
Length = 786
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 182/316 (57%), Gaps = 16/316 (5%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I I R+LVITGPNTGGKT+CLKT+GL +M ++GL I + + + + F ++A
Sbjct: 310 VPISIHIGEAFRLLVITGPNTGGKTVCLKTLGLLQLMGQAGLLIPAFQGSSITVFKEIYA 369
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I+S++ S L L DE+GAGT+P EG AL + +L
Sbjct: 370 DIGDEQSIEQSLSTFSAHMTNTVKILSEADSDCLCLFDELGAGTDPTEGAALALGILHEL 429
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G + T+ATTH+ E+K S + ENA EFD L+PTY++L GVPG+S+A IA+
Sbjct: 430 YERG-VTTLATTHYAEIKLYALSTEGVENAACEFDVESLRPTYRLLIGVPGKSNAFAIAK 488
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEM-------ERFKTQFLEHVHEARHFLMLSRN 631
+LGL ++++AR G ++I ++ ER + + ++ E +R
Sbjct: 489 KLGLSEKIIEDARGRIGEEDLHFEDLISDLEDSKRLAERERLEIEQYKEEVERLKARARE 548
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS-----QARSL 686
K + + R KIL R + +SDA A S+V + ++ S Q RS
Sbjct: 549 STKGIEKGREKILNRA---REEAAKILSDAKETADSIVKEIRKRENGGGSSLEVEQIRSK 605
Query: 687 VHKRAQQLRPSASQSL 702
+ K+ ++ + + QS+
Sbjct: 606 LKKKMEETQAFSGQSV 621
>gi|363897770|ref|ZP_09324308.1| hypothetical protein HMPREF9624_00870 [Oribacterium sp. ACB7]
gi|361958235|gb|EHL11537.1| hypothetical protein HMPREF9624_00870 [Oribacterium sp. ACB7]
Length = 786
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 182/316 (57%), Gaps = 16/316 (5%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I I R+LVITGPNTGGKT+CLKT+GL +M ++GL I + + + + F ++A
Sbjct: 310 VPISIHIGEAFRLLVITGPNTGGKTVCLKTLGLLQLMGQAGLLIPAFQGSSITVFKEIYA 369
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I+S++ S L L DE+GAGT+P EG AL + +L
Sbjct: 370 DIGDEQSIEQSLSTFSAHMTNTVKILSEADSDCLCLFDELGAGTDPTEGAALALGILHEL 429
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
E G + T+ATTH+ E+K S + ENA EFD L+PTY++L GVPG+S+A IA+
Sbjct: 430 YERG-VTTLATTHYAEIKLYALSTEGVENAACEFDVESLRPTYRLLIGVPGKSNAFAIAK 488
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEM-------ERFKTQFLEHVHEARHFLMLSRN 631
+LGL ++++AR G ++I ++ ER + + ++ E +R
Sbjct: 489 KLGLSEKIIEDARGRIGEEDLHFEDLISDLEDSKRLAERERLEIEQYKEEVERLKARARE 548
Query: 632 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS-----QARSL 686
K + + R KIL R + +SDA A S+V + ++ S Q RS
Sbjct: 549 STKGIEKGREKILNRA---REEAAKILSDAKETADSIVKEIRKRENGGGSSLEVEQIRSK 605
Query: 687 VHKRAQQLRPSASQSL 702
+ K+ ++ + + QS+
Sbjct: 606 LKKKMEETQAFSGQSV 621
>gi|325264641|ref|ZP_08131371.1| MutS2 protein [Clostridium sp. D5]
gi|324030303|gb|EGB91588.1| MutS2 protein [Clostridium sp. D5]
Length = 791
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 216/398 (54%), Gaps = 32/398 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI + + +L+ITGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F V+A
Sbjct: 316 VPISVTLGEDFTLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAGDRSELAIFRQVYA 375
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I + + + SLVL DE+GAGT+P EG AL +++L
Sbjct: 376 DIGDEQSIEQSLSTFSSHMTNIVSFLQEVDENSLVLFDELGAGTDPTEGAALAIAILSYL 435
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ G + T+ATTH+ ELK S ENAC EFD L+PTY++L G+PG+S+A I+
Sbjct: 436 HKRG-IRTMATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLLGIPGKSNAFAISG 494
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
+LGLP ++++A+Q A +++ ++E K + +E EA + KN +
Sbjct: 495 KLGLPDYIIEDAKQHLTEQDASFEDLLTDLESGK-RTIEKEREAIEAYKREVEILKNQAK 553
Query: 639 TRRKILEHCASQRFRKVQKISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 697
++ +E QR R +++ ++ A I R +A+ L + + R
Sbjct: 554 QKQVKIEE---QRERILKEANEKAGTILR---------------EAKELADETMKNFRKF 595
Query: 698 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDL 757
+ + ++ K + L ++T+ A S V+ KQ K + +G+
Sbjct: 596 GKEGISVAEMEKERERLRQKMKETSA--------AGSMAVQ--KQKKAYKPGDF-KLGES 644
Query: 758 VHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
V V S GTV + S+ + VQ+G ++ + +D+
Sbjct: 645 VKVLSMNLTGTVSSLPDSRGNLTVQMGILRSQVNISDL 682
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 206 RLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R CI A+ S G++ S GS IEP++ V LN++L++ A + + +L L
Sbjct: 194 RYCIPVKAEYRSQVNGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQEEIQVILARL 253
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ + ++EI + LD + AR + +LS + P
Sbjct: 254 SADTALYIEEIHNNYKLLTDLDFIFARGSLALSMNASRP 292
>gi|403384307|ref|ZP_10926364.1| MutS2 protein [Kurthia sp. JC30]
Length = 789
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 282/597 (47%), Gaps = 115/597 (19%)
Query: 206 RLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARASVTKAEED-VLLA 261
R I A+ S G ++ S+SG IEP + V N+E+Q + KAE D +L+
Sbjct: 198 RFVIPVKAEYRSHYGGVIHDQSASGQTLYIEPDAVVQANNEIQGLKVK-EKAEVDRILME 256
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
L+ K+Q + ++ + ++DVV A+A Y + T P +
Sbjct: 257 LSAKVQEVAHSLFVLVQILGEIDVVLAKAKYGQAHKCTMPKM------------------ 298
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
++R + + L KA HPLL D+++A
Sbjct: 299 ---NDRGY-MKLTKARHPLL-------------DVDTA---------------------- 319
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
V DI +VITGPNTGGKT+ LKT+GL +MA++GL
Sbjct: 320 -----------------VANDIEFGDDVTAIVITGPNTGGKTVTLKTIGLCTLMAQAGLP 362
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
+ + + +++ F +FADIGDEQS+ QSLSTFS H+ I +I+++ SLVL DE+GAG
Sbjct: 363 VPALDGSELAVFTQLFADIGDEQSIEQSLSTFSSHMVNIVDILNEFDHDSLVLFDELGAG 422
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG AL +S+L+ G+ + +ATTH+ ELK Y+ NA MEF+ L PTY
Sbjct: 423 TDPQEGAALAISILDEVHGRGARV-MATTHYPELKAYGYNRPGVVNASMEFNVDTLSPTY 481
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
++L GVPGRS+A I++RLGLP +++ A+ G + E+ +I +E + Q + E
Sbjct: 482 RLLIGVPGRSNAFEISKRLGLPDNIIETAKSYTGTETHEVESMIASLETSRRQAEKDAEE 541
Query: 622 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 681
+ L S L +L KI E+ A++ +L A
Sbjct: 542 SARLLAESNALRADL---DAKIAEYEATK-----------------------DELAKKAK 575
Query: 682 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVD---KVEHPATASSSVVK 738
+ + A+Q S LH + NQ V + +D ++E A A + +
Sbjct: 576 EKARKIVAEAKQEAESIIDELHKMQHRANQAVK----EHEIIDARKRLESAAPAPENRIL 631
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
KQ R + VGD V V S+G++GT++K + S E VQ+G +K + D+
Sbjct: 632 K-KQRQLNARAQTLQVGDEVKVLSYGQRGTLLKKDKSG-EWHVQIGILKMKLPEEDL 686
>gi|334340999|ref|YP_004545979.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
gi|334092353|gb|AEG60693.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
Length = 783
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 218/403 (54%), Gaps = 38/403 (9%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
A VP I + + R LVITGPNTGGKT+ LKTVGL +M +SGLHI + ++ F
Sbjct: 310 ADAVPATISLGKDFRSLVITGPNTGGKTVTLKTVGLFTLMTQSGLHIPAESGTEMGVFSK 369
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
++ADIGDEQS+ QSLSTFS H+ + +I++ + SLVLLDE+GAGT+P EG AL ++L
Sbjct: 370 IYADIGDEQSIEQSLSTFSSHMTNLVDILAGAGQGSLVLLDELGAGTDPTEGAALARAIL 429
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
E + G + TIATTH+ ELK Y+ ENA +EFD L+PTY++L G PGRS+A
Sbjct: 430 ETLFQRG-VCTIATTHYSELKNYAYTTPGVENASVEFDIETLRPTYRLLIGRPGRSNAFE 488
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
I+ RLGL VVQ ARQ E+ ++I ++E+ + E L R+ K
Sbjct: 489 ISARLGLSPEVVQRARQFLTTEQVEVADLINKLEQTQQA---AEREREEAETLRRDSEK- 544
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L+ R + LE Q+ R+ ++ SL+ K+ ++ AR + ++LR
Sbjct: 545 -LKERYRQLE----QQLREKRE---------SLLEKAQEEAARLVRNARLEADEAVKELR 590
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP--- 752
++ +N S QQ +K++ + ++ V + RV E+P
Sbjct: 591 SKLAE--------ENAKDRESAIQQAR-NKLQRVTSKVAAKVPE-----RVVPGEIPRQV 636
Query: 753 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
G V + + +K V+ V S + + VQVG MK + ++
Sbjct: 637 KPGQQVFLPKYNQKAYVLSV--SGDNVQVQVGIMKMFVPLKEL 677
>gi|352518027|ref|YP_004887344.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
gi|348602134|dbj|BAK95180.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
Length = 792
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 166/266 (62%), Gaps = 1/266 (0%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
DI I + +VITGPNTGGKTI LKT+GL +M ++GL I + E +++ F+ VFADIG
Sbjct: 323 DIMIGEDYQAVVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEDSQMGIFNEVFADIG 382
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I ++++Q SLVL DE+GAGT+P EG AL +++L+ A
Sbjct: 383 DEQSIEQNLSTFSSHMTTIVDVLNQVDKNSLVLFDELGAGTDPQEGAALAIAILDDLAAK 442
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I+ RLG
Sbjct: 443 QAYV-MATTHYPELKVYGYNRPKTVNASMEFDVDTLSPTYRLLIGVPGRSNAFEISRRLG 501
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L ++ +A+Q+ S ++NE+I ++E + E R+++ ++ LH++L +
Sbjct: 502 LDQTLIDSAKQIMNGESQDLNEMITDLENRRKMAETEYLELRNYVSKAKQLHEDLQEAYQ 561
Query: 642 KILEHCASQRFRKVQKISDAAAIARS 667
E ++ + K +D A+
Sbjct: 562 YFYEQKENEFAKARSKANDIVEQAKD 587
>gi|419783156|ref|ZP_14308948.1| MutS2 family protein [Streptococcus oralis SK610]
gi|383182582|gb|EIC75136.1| MutS2 family protein [Streptococcus oralis SK610]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGVFVEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ + ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELSREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|423512651|ref|ZP_17489182.1| MutS2 protein [Bacillus cereus HuA2-1]
gi|402447575|gb|EJV79425.1| MutS2 protein [Bacillus cereus HuA2-1]
Length = 786
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCA--SQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 643 SGDEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESNM 683
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P+E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|228477326|ref|ZP_04061964.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
gi|228251345|gb|EEK10516.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
Length = 782
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 151/230 (65%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQSVETQKRLEHIKD 534
>gi|421453204|ref|ZP_15902560.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181513|gb|EJO15780.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
Length = 810
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 152/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 335 LVNPVANDLHFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 394
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 395 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNAADSNSLVLVDELGAGTDPQEGASLAMAI 454
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 455 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 513
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 514 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 562
>gi|417938567|ref|ZP_12581864.1| MutS2 family protein [Streptococcus infantis SK970]
gi|343391027|gb|EGV03603.1| MutS2 family protein [Streptococcus infantis SK970]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 213/386 (55%), Gaps = 40/386 (10%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVQNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ VFADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQNSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL MS+LE + T+ATTH+ ELK + +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMSILEDL-RLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V G AS +IN+ ++ R Q E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIV-------GDASKQINQD-NDVNRIIEQLEEQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
L R + + L+ R + + K +++ A A +V + L S
Sbjct: 527 KRLENIRQVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELA---LAESDDIL 583
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
++L H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 584 KNL-HSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ----- 621
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 -KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|387760548|ref|YP_006067525.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
gi|339291315|gb|AEJ52662.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
Length = 782
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 151/230 (65%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVATFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|395242020|ref|ZP_10419020.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480768|emb|CCI85260.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 786
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 224/412 (54%), Gaps = 40/412 (9%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+S L+ HP V DI++ ++ITGPNTGGKTI LKT GL +MA+SGL I
Sbjct: 299 ISLLKARHPLIDPEKVVANDIYLGNDFDTMLITGPNTGGKTITLKTAGLLQLMAQSGLFI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E +KV F+ +FADIGDEQS+ QSLSTFS H+ I I+ ++ +LVL+DEIGAGT
Sbjct: 359 PAQEGSKVGVFNEIFADIGDEQSIEQSLSTFSSHINDIVEIMKRAQGDTLVLIDEIGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG +L +S+L+ S + + TTH+ ELK Y+ NA MEFD L PTY+
Sbjct: 419 DPEEGASLAISILDYLQSRNSKIMV-TTHYPELKLYGYNRPRTTNASMEFDLKSLSPTYR 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
+ G+PG S+A IA RLG+ VV++A QL ++IN+ +IE F+T+ EA
Sbjct: 478 LQIGIPGHSNAFAIARRLGMREDVVKSAEQLMDDTDSDINK-MIEQLNFQTK---KATEA 533
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+ L +L R+R+ LE +K+ DA V K + A++
Sbjct: 534 K------TKLESSLARSRQ--LE----------KKLQDALDWYNQRVQKQLEFAQERANE 575
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K+A Q+ + + K ++ + + +++K E A++ V++
Sbjct: 576 VVAKKRKKADQIIKQLEEQQKNGALIKQNKIIDAKGELNSLEK-EANNLANNKVLQ---- 630
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
R KR NVGD V V S+G+ G V K + ++ VQ+G +K +K TD
Sbjct: 631 --REKRRHHVNVGDQVKVLSYGQTGVVTK-KLTEHNYEVQMGIVK--VKVTD 677
>gi|322373719|ref|ZP_08048255.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
gi|321278761|gb|EFX55830.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
Length = 782
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 152/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|333994261|ref|YP_004526874.1| MutS2 family protein [Treponema azotonutricium ZAS-9]
gi|333734619|gb|AEF80568.1| MutS2 family protein [Treponema azotonutricium ZAS-9]
Length = 801
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 208/421 (49%), Gaps = 80/421 (19%)
Query: 205 GRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLA 261
GR+ + A+ + KG++ +SS+G +EP V N+EL + VL
Sbjct: 190 GRMVLAVKANYRGRIKGIVHEVSSTGQTLFVEPEEVVEKNNELLIENRRLDAEIRRVLRE 249
Query: 262 LTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSK 321
+T ++ +I K GI+ L+ + ARA Y G K
Sbjct: 250 MTGRILASHTQIAKFHEGIVHLETLRARARYGFETRG----------------------K 287
Query: 322 VSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDT 381
++ +R+ + L KA HP L G A
Sbjct: 288 FAALDRDGALILKKARHP----------------------------LLGAKA-------- 311
Query: 382 NLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 441
VP+D + TR +++TGPNTGGKT+ LKT GL +M + GL
Sbjct: 312 -----------------VPLDFAMNGNTRTVIVTGPNTGGKTVALKTAGLLALMNQFGLP 354
Query: 442 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 501
+ E + +P FD V+ADIGDEQS+SQSLSTFS H+ I +I S++ +SLVLLDE+G+G
Sbjct: 355 LPIDEGSCLPIFDGVYADIGDEQSISQSLSTFSSHMTNIASICSRAGERSLVLLDELGSG 414
Query: 502 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 561
T+P EG+A+ M++L+ E S L IATTHHG LK Y+ +NA MEFD L PT+
Sbjct: 415 TDPEEGSAIAMAILDHLIEKRSRL-IATTHHGILKNYGYTRKGVQNASMEFDGKTLSPTF 473
Query: 562 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 621
+I+ G+PG S A++IA R GL +V AR A+I+ V+I R K + L+ E
Sbjct: 474 RIVMGIPGESRAVDIAARNGLGADIVAKARTYLAEEQADIS-VLINGLREKHRELDAATE 532
Query: 622 A 622
A
Sbjct: 533 A 533
>gi|315612581|ref|ZP_07887494.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
gi|315315562|gb|EFU63601.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ ++ +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKELTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVELALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AELKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P +GD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKMGDDIVVLSYGQRGTL 646
>gi|289168565|ref|YP_003446834.1| mismatch repair ATPase (MutS family) [Streptococcus mitis B6]
gi|288908132|emb|CBJ22973.1| mismatch repair ATPase (MutS family) [Streptococcus mitis B6]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V DI + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDIHFGQDLTAIVITGPNTGGKTIMLKTLGLTQIMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKVYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVNQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|206901081|ref|YP_002251021.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
gi|206740184|gb|ACI19242.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 216/409 (52%), Gaps = 52/409 (12%)
Query: 394 ELAHP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEY 447
E HP VPI + + R LVITGPNTGGKT+ LKT+GL V++ ++G+ + + E
Sbjct: 299 EARHPFLGEKAVPISLEVGRTFNTLVITGPNTGGKTVTLKTIGLFVLLNQAGIPVPAKEG 358
Query: 448 AKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIIS----QSTSQSLVLLDEIGAGTN 503
+ F+ VFADIGDEQS+ Q+LSTFS H+ I + I + L+L+DE+GAGT+
Sbjct: 359 TVLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKRVLILIDELGAGTD 418
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL ++LLE F E G++ IA TH +LK + ENA MEFDE+ LKP YK+
Sbjct: 419 PQEGAALAVALLEYFHEKGTINVIA-THFPQLKVIASKYPGMENASMEFDEISLKPLYKV 477
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ G+PG+S+AI I++RLGLP ++ + L ++ EVI E++R + ++ E + +
Sbjct: 478 VMGIPGKSNAILISKRLGLPRKILDRSLSLLSEDEIKLEEVIGELQRDRRRYEEEIEKI- 536
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
L ++L +RKI E K Q L K ++L S+
Sbjct: 537 ------NKLKRDLQEEKRKIQEEKEMLEKEKAQ-----------LKAKYKEELFRDISKV 579
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
+ + ++L+ +SL Q L + ++ T+++ P
Sbjct: 580 EGKIREIIRKLQ---EESLTMKDAQSLQEELRNLRKELTIEEKREPENL----------- 625
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVG----NMKW 788
T +P++GD V + S K+G VI V+ K+ +VQVG N+ W
Sbjct: 626 -----TYIPHIGDRVLLRSTKKEGYVIDVDNEKKTALVQVGLLKINVPW 669
>gi|322387278|ref|ZP_08060888.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
gi|419843400|ref|ZP_14366714.1| MutS2 family protein [Streptococcus infantis ATCC 700779]
gi|321141807|gb|EFX37302.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
gi|385702866|gb|EIG40002.1| MutS2 family protein [Streptococcus infantis ATCC 700779]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 212/389 (54%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVQNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ VFADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQNSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL MS+LE + T+ATTH+ ELK + +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMSILEDL-RLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V G AS +IN+ ++ R Q E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIV-------GDASKQINQD-NDVNRIIEQLEEQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + + +
Sbjct: 527 KRLENIRQVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDLALAESDDILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|154499931|ref|ZP_02037969.1| hypothetical protein BACCAP_03588 [Bacteroides capillosus ATCC
29799]
gi|150271529|gb|EDM98786.1| MutS2 family protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 791
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 224/450 (49%), Gaps = 83/450 (18%)
Query: 223 LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQ 282
+SSSG IEP+ V N+EL++ +A K + +L L+ ++I + + +I
Sbjct: 215 VSSSGGTFFIEPMGVVKANNELRELQADEEKEIDRILAELSADCAAHKEDIAQDYDLLIM 274
Query: 283 LDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 342
LDV+ ARA S R EP K+ S I L +A HPLL
Sbjct: 275 LDVIFARAKLSY----------------RMRASEP---KIVS----RGICLRQARHPLL- 310
Query: 343 QQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPID 402
D N V D
Sbjct: 311 -------------------------------------DPN--------------KAVAND 319
Query: 403 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 462
+++ LVITGPNTGGKT+ LKT+GL +MA+ GLHI ++ + V FD V +DIGD
Sbjct: 320 LYLGGDFDTLVITGPNTGGKTVTLKTIGLLTLMAQCGLHIPVADDSTVMIFDRVLSDIGD 379
Query: 463 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 522
EQS++QSLSTFS H+ I I+ ++ ++L+L DE+GAGT+P+EG AL +++E E G
Sbjct: 380 EQSIAQSLSTFSSHMVNIVGILKEADDKTLILFDELGAGTDPIEGAALAAAIIEQSRELG 439
Query: 523 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 582
+L+ ATTH+ ELK + ENA EFD L PTY++L G+PG+S+A I+ERLGL
Sbjct: 440 ALVA-ATTHYAELKVYAMTTAGVENASCEFDVNSLAPTYRLLIGIPGKSNAFAISERLGL 498
Query: 583 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 642
P V+ A A + +VI +E+ + Q + +AR R ++ RT R+
Sbjct: 499 PKEVIDKASARIDAENVRFEDVITRLEQQRQQMEQEKDQARKL----RREMEDSARTARE 554
Query: 643 ILEHCASQRFRKVQKISDAAAIARSLVHKS 672
+ +R + V+K A A AR+++ ++
Sbjct: 555 YRDKLEKERAKAVEK---AQAEARAILDEA 581
>gi|321312391|ref|YP_004204678.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
gi|320018665|gb|ADV93651.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
Length = 785
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEYTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T +P+ + I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKAT----------------KPIMNDTG------FIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPLL P ++
Sbjct: 306 KARHPLL------------------------------------------PPDQV------ 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 318 ----VANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAMKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RSI-----------KEEHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKTQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|387784883|ref|YP_006070966.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
gi|338745765|emb|CCB96131.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
Length = 782
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 151/230 (65%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 307 LVNPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 366
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I+ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 367 EIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGASLAMAI 426
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 485
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 486 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 534
>gi|430758681|ref|YP_007208637.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430023201|gb|AGA23807.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 785
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEYTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T +P+ + I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKAT----------------KPIMNDTG------FIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL L P ++
Sbjct: 306 KARHPL------------------------------------------LPPDQV------ 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 318 ----VANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAMKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RSI-----------KEEHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKTQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|408411562|ref|ZP_11182705.1| MutS2 protein [Lactobacillus sp. 66c]
gi|407874274|emb|CCK84511.1| MutS2 protein [Lactobacillus sp. 66c]
Length = 788
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 216/400 (54%), Gaps = 31/400 (7%)
Query: 396 AHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDS 455
A V DI + + ++ITGPNTGGKTI LKT+GL +MA+SGL I ++E ++V FD
Sbjct: 317 AKVVANDICLGQDFDTVLITGPNTGGKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQ 376
Query: 456 VFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLL 515
+FADIGDEQS+ QSLSTFS H+ I I+ + TS+SLVL+DEIGAGT+P EG +L +S+L
Sbjct: 377 IFADIGDEQSIEQSLSTFSSHITDIVAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISIL 436
Query: 516 EAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAIN 575
+ F + + + + TTH+ ELK YS + NA MEFD L PTY++ G+PG S+A
Sbjct: 437 DFFRKKQAKIMV-TTHYPELKLYGYSRERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFA 495
Query: 576 IAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKN 635
IA RLG+ VV +A +L ++IN +I E+ + +T+ E R L S + KN
Sbjct: 496 IARRLGMREDVVLDAEKLMSDDDSDINHMIDELNK-QTKL---ATENRQKLQSSLDRAKN 551
Query: 636 LLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLR 695
L + R L+ +QR +K QL + +A +V K+ ++
Sbjct: 552 LEKQLRDALD-IYNQRVQK--------------------QLDFAQERANEIVAKKRKKAD 590
Query: 696 PSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVG 755
+ K G N + N + A +++ K+ KR + VG
Sbjct: 591 KIIADLEEARKNGAN---IKENQLMDAKGEFNQLAKQEANLAKNKVLQKEKKRHHVA-VG 646
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V S+G+ GTV K + E V +G +K + DI
Sbjct: 647 DKVKVLSYGQTGTVTK-KLGDHEYEVALGRIKLKVSDRDI 685
>gi|381211900|ref|ZP_09918971.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
Length = 780
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 214/397 (53%), Gaps = 38/397 (9%)
Query: 402 DIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIG 461
D+ + + +VITGPNTGGKT+ LK +GL +MA+SGL I +++ ++ FD VFADIG
Sbjct: 316 DVVLGKDYTSIVITGPNTGGKTVTLKMIGLFTLMAQSGLQIPAADGCEMAVFDDVFADIG 375
Query: 462 DEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAES 521
DEQS+ Q+LSTFS H+ I +I+S +SLVL DE+GAGT+P EG AL MS+L+
Sbjct: 376 DEQSIEQNLSTFSSHMINIVSILSGIDDKSLVLFDELGAGTDPQEGAALAMSILDDVVSR 435
Query: 522 GSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLG 581
G+ + +ATTH+ ELK ++ D NA +EFD L+PTY++L GVPGRS+A IA RLG
Sbjct: 436 GARV-VATTHYPELKAYGFNRDNVINASVEFDVETLQPTYRLLIGVPGRSNAFEIAGRLG 494
Query: 582 LPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
L ++ A+ G S + +I +E+ + Q EA L S L +L++ +
Sbjct: 495 LAQSIIDRAKNQVGVNSESVENMIASLEQSRRQAEADYEEAHEILQESEELRNDLIKAWQ 554
Query: 642 KILEHCASQRFRKVQKISDAA-AIARSLVHKSAQQLCPSASQARSLVHK--RAQQLRPSA 698
+ E+ ++K ++ +D A AR ++ + A+ H+ A+++ A
Sbjct: 555 Q-YENKREDLYKKAEEKADKALQKARDEAETIVDEIRHMKTDAQLKEHEWIEARKMLEEA 613
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 758
L K K P KQ P + P GD +
Sbjct: 614 QPKLSSKKANK-------------------P-----------KQQPNTAKEFKP--GDEI 641
Query: 759 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ S ++GT+++ + ++ E ++QVG MK +K ++I
Sbjct: 642 KLLSANQQGTILE-KLNENEYLIQVGIMKVQVKRSEI 677
>gi|423557869|ref|ZP_17534171.1| MutS2 protein [Bacillus cereus MC67]
gi|401192406|gb|EJQ99422.1| MutS2 protein [Bacillus cereus MC67]
Length = 786
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 222/402 (55%), Gaps = 41/402 (10%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHC--ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRP 696
+R+I+E ++ K QK + +++ + +A ++H+ +QLR
Sbjct: 555 -QRQIIEFNDERDEKLLKAQK-------------EGEEKVEAAKKEAEGIIHE-LRQLRK 599
Query: 697 SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPN 753
+ L + ++ A+ +VK KQ VK T +
Sbjct: 600 AQ---------------LVNVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLR 642
Query: 754 VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KG ++K + S E VQ+G +K +K +++
Sbjct: 643 PGDEVKVLTFGQKGQLLK-KVSDTEWSVQIGILKMKVKESNM 683
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S ++ + S L P+E + + + + S ++ + + +L
Sbjct: 63 ----VPLGGI--SDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAENGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILEGHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|385837812|ref|YP_005875442.1| Recombination inhibitory protein MutS2 [Lactococcus lactis subsp.
cremoris A76]
gi|414074686|ref|YP_006999903.1| DNA mismatch repair protein mutS [Lactococcus lactis subsp.
cremoris UC509.9]
gi|358749040|gb|AEU40019.1| Recombination inhibitory protein MutS2 [Lactococcus lactis subsp.
cremoris A76]
gi|413974606|gb|AFW92070.1| DNA mismatch repair protein mutS [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 776
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 187/318 (58%), Gaps = 22/318 (6%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI R +VITGPNTGGKTI LKTVGL ++A+SGL IL+ + +++ FD +FA
Sbjct: 313 VANDIKFDRTLNTIVITGPNTGGKTITLKTVGLLTILAQSGLPILADDGSRIHLFDDIFA 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++Q+ SLVL DE+GAGT+P EG AL +++LE
Sbjct: 373 DIGDEQSIEQSLSTFSSHMTNIVQILAQADENSLVLFDELGAGTDPKEGAALAIAILENL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ ++ T+A+TH+ ELK NA MEF+ K++PTY + GVPGRS+A+ I+
Sbjct: 433 RKR-NVKTMASTHYPELKAYGVKTQQVINASMEFNIDKMQPTYHLQLGVPGRSNALEISR 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A Q + ++N++I ++E + +E + +++LHK+L +
Sbjct: 492 RLGLPETIISEAGQQISGSEHDVNQMIEKLEEKTREVIESSRNIKKIERENQSLHKDLTK 551
Query: 639 TRRKI-------LEHCASQRFRKVQKIS-DAAAIARSLVHKSA-------------QQLC 677
+I LE + V+K S +A I ++L K+A + L
Sbjct: 552 VYNQINRERDFELEKAQKEAQEVVKKASLEAQEILKNLNDKAALKPHEIIAARKELEGLA 611
Query: 678 PSASQARSLVHKRAQQLR 695
P+ +++ V K+A+ R
Sbjct: 612 PTIDFSKNKVLKKAKAQR 629
>gi|16079910|ref|NP_390736.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310799|ref|ZP_03592646.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315124|ref|ZP_03596929.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221320042|ref|ZP_03601336.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324324|ref|ZP_03605618.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402777014|ref|YP_006630958.1| DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|418031956|ref|ZP_12670439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|452915656|ref|ZP_21964282.1| mutS2 family protein [Bacillus subtilis MB73/2]
gi|3914084|sp|P94545.2|MUTS2_BACSU RecName: Full=MutS2 protein
gi|1770036|emb|CAA99569.1| hypothetical protein [Bacillus subtilis]
gi|2635323|emb|CAB14818.1| putative DNA mismatch repair enzyme [Bacillus subtilis subsp.
subtilis str. 168]
gi|351470819|gb|EHA30940.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|402482194|gb|AFQ58703.1| Putative DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|407960866|dbj|BAM54106.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|407965696|dbj|BAM58935.1| recombination and DNA strand exchangeinhibitorprotein [Bacillus
subtilis BEST7003]
gi|452116004|gb|EME06400.1| mutS2 family protein [Bacillus subtilis MB73/2]
Length = 785
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 280/581 (48%), Gaps = 109/581 (18%)
Query: 217 SFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIE 274
S+ G++ SSSG IEP + V +N+ LQQA+ + E +L LTEK +E+
Sbjct: 208 SYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAEYTEELF 267
Query: 275 KMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLP 334
L + LD + A+A Y+ + T +P+ + I L
Sbjct: 268 LDLQVLQTLDFIFAKARYAKAVKAT----------------KPIMNDTG------FIRLK 305
Query: 335 KAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALE 394
KA HPL L P ++
Sbjct: 306 KARHPL------------------------------------------LPPDQV------ 317
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
V DI + R +VITGPNTGGKT+ LKT+GL +MA+SGLHI + E ++ F+
Sbjct: 318 ----VANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFE 373
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
VFADIGDEQS+ QSLSTFS H+ I I+ Q SLVL DE+GAGT+P EG AL MS+
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSI 433
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
L+ + + + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A
Sbjct: 434 LDDVHRTNARV-LATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 634
I++RLGLP ++ A+ A E++ +I +E+ K + E + E + LHK
Sbjct: 493 EISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHK 552
Query: 635 NLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 694
L +++I+E + +K + + +A ++A+++ + +A ++H +L
Sbjct: 553 EL---QQQIIELNS----KKDKMLEEAE-------QQAAEKVKAAMKEAEDIIH----EL 594
Query: 695 RPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNV 754
R K +H + + K A + K ++ KR P
Sbjct: 595 RTI-----------KEEHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKTQKRDFKP-- 641
Query: 755 GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 GDEVKVLTFGQKGTLLE-KTGGNEWNVQIGILKMKVKEKDL 681
>gi|116512507|ref|YP_811414.1| MutS family DNA structure-specific ATPase [Lactococcus lactis
subsp. cremoris SK11]
gi|123025269|sp|Q02XM1.1|MUTS2_LACLS RecName: Full=MutS2 protein
gi|116108161|gb|ABJ73301.1| DNA structure-specific ATPase for suppression of recombination,
MutS family [Lactococcus lactis subsp. cremoris SK11]
Length = 776
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 187/318 (58%), Gaps = 22/318 (6%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
V DI R +VITGPNTGGKTI LKTVGL ++A+SGL IL+ + +++ FD +FA
Sbjct: 313 VANDIKFDRTLNTIVITGPNTGGKTITLKTVGLLTILAQSGLPILADDGSRIHLFDDIFA 372
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I++Q+ SLVL DE+GAGT+P EG AL +++LE
Sbjct: 373 DIGDEQSIEQSLSTFSSHMTNIVQILAQADENSLVLFDELGAGTDPKEGAALAIAILENL 432
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ ++ T+A+TH+ ELK NA MEF+ K++PTY + GVPGRS+A+ I+
Sbjct: 433 RKR-NVKTMASTHYPELKAYGVKTQQVINASMEFNIDKMQPTYHLQLGVPGRSNALEISR 491
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP ++ A Q + ++N++I ++E + +E + +++LHK+L +
Sbjct: 492 RLGLPETIISEAGQQISGSEHDVNQMIEKLEEKTREVIESSRNIKKIERENQSLHKDLTK 551
Query: 639 TRRKI-------LEHCASQRFRKVQKIS-DAAAIARSLVHKSA-------------QQLC 677
+I LE + V+K S +A I ++L K+A + L
Sbjct: 552 VYNQINRERDFELEKAQKEAQEVVKKASLEAQEILKNLNDKAALKPHEIIAARKELEGLA 611
Query: 678 PSASQARSLVHKRAQQLR 695
P+ +++ V K+A+ R
Sbjct: 612 PTIDFSKNKVLKKAKAQR 629
>gi|423598156|ref|ZP_17574156.1| MutS2 protein [Bacillus cereus VD078]
gi|401237617|gb|EJR44068.1| MutS2 protein [Bacillus cereus VD078]
Length = 786
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSNRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A Q + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKQEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D I + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIILSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|313896601|ref|ZP_07830150.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312974786|gb|EFR40252.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 761
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 214/395 (54%), Gaps = 36/395 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPIDI + R VL+ITGPNTGGKT+ +KT+G+ +MA+SG + ++ A++P + S++A
Sbjct: 290 VPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILALMAQSGCFLPTASGAELPVYGSIYA 349
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H K I I+ ++ S LVLLDE+GAGT+P EG AL S++E
Sbjct: 350 DIGDEQSIEQSLSTFSAHTKNIVRILQKAKSNDLVLLDEVGAGTDPDEGAALARSIIEHL 409
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+ + IATTH+ LKT Y NA +EFD L+PTY++L G PG S+A +I+
Sbjct: 410 LQR-RISVIATTHYAALKTYAYGRQGVMNASVEFDTSTLRPTYRLLIGTPGASNAFSISR 468
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL +V A++ V+ E+E+ K +E R + LR
Sbjct: 469 RLGLADAIVARAQRYIDEDHVRFETVVNELEQEK-----RAYETR----------QTELR 513
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
R + + Q + K A R L+HK+ ++ +AR + ++L+
Sbjct: 514 IRAQKISAMEEQLRTERDKFIQAH---RKLLHKAREEANGIVREARRSAEETIKKLK--- 567
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKV--EHPATASSSVVKDIKQSPRVKRTELPNVGD 756
Q V + + + ++ T + HP+ K +++ E+ GD
Sbjct: 568 -QQFDDHGVKERRKAIQEARERLTGAYMPQRHPSAT--------KVGQKIRAGEI-EPGD 617
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 791
+VH++ ++GTV+ V+ +E+ VQ+G ++ ++K
Sbjct: 618 IVHITRLAQEGTVLAVQ--GKELTVQIGALRTVVK 650
>gi|385260721|ref|ZP_10038864.1| MutS2 family protein [Streptococcus sp. SK140]
gi|385190964|gb|EIF38392.1| MutS2 family protein [Streptococcus sp. SK140]
Length = 778
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 212/389 (54%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVKNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + +++ F+ VFADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRIGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQNSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL MS+LE + T+ATTH+ ELK + +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMSILEDL-RLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V G AS +IN+ ++ R Q E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIV-------GDASKQINQD-NDVNRIIEQLEEQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA L + + +
Sbjct: 527 KRLENIRQVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDLALAESDDILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|225026876|ref|ZP_03716068.1| hypothetical protein EUBHAL_01130 [Eubacterium hallii DSM 3353]
gi|224955800|gb|EEG37009.1| MutS2 family protein [Eubacterium hallii DSM 3353]
Length = 791
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 218/400 (54%), Gaps = 34/400 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPI I+I +L++TGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F +FA
Sbjct: 317 VPIHIYIGEDFNMLLLTGPNTGGKTVSLKTVGLFQLMGQAGLHIPAFQGSRLAVFSDIFA 376
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ +LSTFS H+ + +I+ ++ SLVLLDE+ GT+P EG AL +++L+
Sbjct: 377 DIGDEQSIEMNLSTFSSHMTNLVHILDEADPNSLVLLDELCGGTDPTEGAALAIAILDDL 436
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
+G + T+ATTH+ ELK ENAC EFD L PTY++L G+PG+S+A +I+E
Sbjct: 437 -HTGKIRTVATTHYAELKMYAMDTPGVENACCEFDLETLSPTYRLLIGIPGKSNAFSISE 495
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP +++ AR A + + ++ E+E+ K + + E NL KN L+
Sbjct: 496 RLGLPDYIIEQARSQIDATAIDFENMLSELEKNKAEIEKEQSELYKTKQEIENL-KNSLK 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
++ ++ + R DA AR+++ ++ + A ++ H Q + +
Sbjct: 555 EKQDDIKEKRDKMLR------DAREEARNILEEAKE----VADESIRKYHAWGQHPKQNN 604
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDK-VEHPATASSSVVK--DIKQSPRVKRTELPNVG 755
+ + + + + +DK + + A SS++ D K VG
Sbjct: 605 MKKMEAQRSDLRGRM-------SKLDKKLAYKAKKSSTISDPSDFK------------VG 645
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V++ GTV + ++V+Q+G + ++ + ++
Sbjct: 646 DSVFVTTLSLNGTVKEAANKDGDLVIQMGFLSSVVNYKNL 685
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 52/296 (17%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAI-EMQKHG 110
++L LE+DK+ + +FA +++G+ L S + Y++ L ET A+ + K G
Sbjct: 4 KALITLEYDKIIKKLETFASSTMGKALCKDLLPSSD--YEEILSAQTETKDALTRLYKTG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALL-------QFSET-----LQLS 158
S LS ++ +R + S L E L + LL ++ +T S
Sbjct: 62 YLSFQ----GLSDIRPHLRLLEIDSTLNTKELLDIARLLSITAQAVEYGDTEDDIMAYDS 117
Query: 159 LRAAIKEDADLYIRFMPLTQMLYQ-----------LMDM-----------------LIRN 190
L + E L + +TQ + L D+ +I +
Sbjct: 118 LNSYFGELDSLEFLYQRITQCILSEDEISDDASSALKDIRREIKQTNISIHNKLTSVINS 177
Query: 191 ENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQ 245
+NN+++ + ++ +GR C+ + + +F G++ SSSG IEP++ V LN+ L+
Sbjct: 178 QNNKTMLQDALITVRNGRYCVPVKTEYRNAFPGMIHDQSSSGSTLFIEPMAVVQLNNHLK 237
Query: 246 QARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
+ E +L +L+ + E+E+ + +LD + A+A Y+ + GT P
Sbjct: 238 ELDIKEKMEIEKILQSLSAQAASCSRELEENQKILTKLDFIFAKAKYAKEYQGTEP 293
>gi|240146928|ref|ZP_04745529.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257200911|gb|EEU99195.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 808
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 210/408 (51%), Gaps = 49/408 (12%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VPID+ + +L+ITGPNTGGKT+ LKTVGL +M ++GLHI +SE +++ F+ VFA
Sbjct: 331 VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERSELGIFEEVFA 390
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H+ I I+SQ +SLVL DE+ AGT+P EG AL +S+L
Sbjct: 391 DIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGAALAISILSKL 450
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK ENAC EFD L PTY++L G+PG+S+A I+
Sbjct: 451 KLYGARV-MATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPGKSNAFAIST 509
Query: 579 RLGLPGIVVQNARQLYGA---------ASAEINEVIIEMERFK-TQFLEHVHEARHFLML 628
+LGL ++++A+ A E + + IE E+ + Q+ E + + + L
Sbjct: 510 KLGLSEDIIEDAKGRISENDMNFEDLLADLEKSRITIEKEQLEINQYKEEIQKLKEQL-- 567
Query: 629 SRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVH 688
+ L +R KIL Q + +++ D A +K P S +
Sbjct: 568 -EQKQERLDASRDKILREANEQAYNIIREAKDLADETIRNFNKYGTAHAPV-----SEME 621
Query: 689 KRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 748
K +LR +N Q+ D+ ++ A P K
Sbjct: 622 KERTKLRDK-----------------MNNAQKKMSDQKKNAA-------------PNHKI 651
Query: 749 TELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDIV 796
+ +GD V V S GTV + +K ++ VQ+G ++ ++ D++
Sbjct: 652 PKKLRIGDRVKVISMNLNGTVHSLPNAKGDLYVQMGILRSLVNINDLI 699
>gi|417935532|ref|ZP_12578849.1| MutS2 family protein [Streptococcus infantis X]
gi|343402441|gb|EGV14946.1| MutS2 family protein [Streptococcus infantis X]
Length = 778
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 213/386 (55%), Gaps = 40/386 (10%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVRHPLVQNAVANDVHFGKDLTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ VFADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQNSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL MS+LE + T+ATTH+ ELK + +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMSILEDL-RLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V G AS +IN+ ++ R Q E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSDVIV-------GDASKQINQD-NDVNRIIEQLEEQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
L R + + L+ R + + K +++ A A +V + L S
Sbjct: 527 KRLENIRQVEQENLKMNRALKKLYNELNREKETELNKAREQASEIVDLA---LAESDDIL 583
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
++L H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 584 KNL-HSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ----- 621
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 -KAKKKRAPKVGDDIIVLSYGQRGTL 646
>gi|423670115|ref|ZP_17645144.1| MutS2 protein [Bacillus cereus VDM034]
gi|401297475|gb|EJS03084.1| MutS2 protein [Bacillus cereus VDM034]
Length = 786
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A Q + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKQEADGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKINVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|153955797|ref|YP_001396562.1| recombination and DNA strand exchange inhibitor protein
[Clostridium kluyveri DSM 555]
gi|219856164|ref|YP_002473286.1| hypothetical protein CKR_2821 [Clostridium kluyveri NBRC 12016]
gi|229486370|sp|A5N245.1|MUTS2_CLOK5 RecName: Full=MutS2 protein
gi|254766597|sp|B9E5U7.1|MUTS2_CLOK1 RecName: Full=MutS2 protein
gi|146348655|gb|EDK35191.1| MutS-related protein [Clostridium kluyveri DSM 555]
gi|219569888|dbj|BAH07872.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 786
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 223/405 (55%), Gaps = 36/405 (8%)
Query: 390 VSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
+ +E HP VP+D+++ + LVITGPNTGGKT+ LKT+GL +MA SGL I
Sbjct: 299 IDIVEGRHPLIDRKTVVPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHIMALSGLMI 358
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
+ E + V +F +FADIGDEQS+ Q+LSTFS H+ I NII+ S +SL+L DE+GAGT
Sbjct: 359 PARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLILFDELGAGT 418
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +S+LE + GS++ +ATTH+ ELK ++ ENA +EFD LKPTYK
Sbjct: 419 DPTEGAALAVSILENLKDRGSMI-VATTHYSELKAYALKSNGVENASVEFDVDTLKPTYK 477
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEA 622
++ G+PG+S+A I++RLGLP +++ AR+ + + + ++I ++ + + + EA
Sbjct: 478 LMIGIPGKSNAFEISKRLGLPEFIIKAARENIASEALKFEDLIQSLQEKRIKAENYFREA 537
Query: 623 RHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQ 682
+L R K ++ Q+ ++Q++ D + + H+ A+++ + +
Sbjct: 538 E---ILKREAAK---------IKEKYEQKAIRLQEVRDKSI---TEAHRKAREIIRESKE 582
Query: 683 ARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQ 742
+ K ++L S ++ + + +L + + + + +K +K+
Sbjct: 583 EADRILKDIRELEKMGYSSSVKHELEERRKMLKDKLENVE-ENLYKAKSEDGQRLKSVKE 641
Query: 743 SPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
G+ V + S +K V+ +K E+ VQ G MK
Sbjct: 642 ------------GEEVFIPSLNQKVLVLSKPDNKGEVQVQAGIMK 674
>gi|417847342|ref|ZP_12493310.1| MutS2 family protein [Streptococcus mitis SK1073]
gi|339456990|gb|EGP69571.1| MutS2 family protein [Streptococcus mitis SK1073]
Length = 778
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 213/387 (55%), Gaps = 40/387 (10%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKVYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
L R + + L+ R + + K +++ A A +V + + Q
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQASEIVDMA----LSESDQI 582
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 583 LKNLHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ----- 621
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTVI 770
+ K+ P VGD + V S+G++GT+I
Sbjct: 622 -KAKKNRAPKVGDDIVVLSYGQRGTLI 647
>gi|375091463|ref|ZP_09737753.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
gi|374563326|gb|EHR34645.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
Length = 785
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 220/409 (53%), Gaps = 44/409 (10%)
Query: 397 HP------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKV 450
HP VPID+ I LVITGPNTGGKT+ LKTVGL V MA++GL + E++KV
Sbjct: 304 HPLLKGKIVPIDVKIGENYNALVITGPNTGGKTVSLKTVGLVVFMAQAGLFVPCDEFSKV 363
Query: 451 PWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTAL 510
F+ VFADIGD QS+ QSLSTFS + I NI++++ +SLVL DE+G GT+P EG AL
Sbjct: 364 AVFNDVFADIGDNQSIEQSLSTFSASMTNIVNILNKANDKSLVLFDELGNGTDPTEGAAL 423
Query: 511 GMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGR 570
M++++ + S+L ++TTH+ ELK S + +NA +EFD L PTYK+ G PG+
Sbjct: 424 AMAIIDTLVKRESIL-LSTTHYSELKLYAMSTEGVQNANVEFDIETLSPTYKLTIGRPGK 482
Query: 571 SSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR 630
S+A I+ RLGL ++ +A+Q + + ++I E+E K++ + E
Sbjct: 483 SNAFEISRRLGLFEDILFDAKQYISKENRDFEDIIAEIEDDKSRLDNQLSE--------- 533
Query: 631 NLHKNLLRTRRKI--LEHCASQRFRKVQK-ISDAAAIARSLVHKSAQQLCPSASQARSLV 687
++K LR ++ I + +R K +K I A A+ + L + ++++ L+
Sbjct: 534 -VNKEKLRYQKLIDDFNNDVGKRREKAEKDIEKAKEEAKKI-------LYDAKNKSKELL 585
Query: 688 HKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVK 747
Q S S+ + N+ N + T K T ++ + D+K
Sbjct: 586 RIAKSQKGRSESRDIDRAYSEINEKYKEENKRYETKPK----QTRKNNKIIDVK------ 635
Query: 748 RTELPNVGDLVHVSSFGKKGTVIKVEP-SKEEIVVQVGNMKWIMKFTDI 795
+G+ V V S G + V++ P +K E+ VQ+G +K+ + D+
Sbjct: 636 ------LGETVKVLSMGGELGVVQTLPDNKGEVTVQMGILKFTVNIRDL 678
>gi|340399647|ref|YP_004728672.1| DNA mismatch repair protein [Streptococcus salivarius CCHSS3]
gi|338743640|emb|CCB94150.1| DNA mismatch repair protein [Streptococcus salivarius CCHSS3]
Length = 810
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 152/230 (66%), Gaps = 5/230 (2%)
Query: 395 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 454
L +PV D+ +VITGPNTGGKT+ LKT+GLA +MA+SGL IL+ + ++V F
Sbjct: 335 LVNPVANDLRFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQ 394
Query: 455 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 514
+FADIGDEQS+ QSLSTFS H+ I I++ + S SLVL+DE+GAGT+P EG +L M++
Sbjct: 395 EIFADIGDEQSIEQSLSTFSSHMTHIVEILNAADSNSLVLVDELGAGTDPQEGASLAMAI 454
Query: 515 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 574
LE S + T+ATTH+ ELK ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 455 LEHLRLS-QIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPGRSNAF 513
Query: 575 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQ-FLEHVHE 621
IA RLGL I+V+ A L S ++N +I +E + +TQ LEH+ +
Sbjct: 514 EIARRLGLNEIIVKEAENLTDTDS-DVNRIIEQLEAQTVETQKRLEHIKD 562
>gi|423660606|ref|ZP_17635775.1| MutS2 protein [Bacillus cereus VDM022]
gi|401302514|gb|EJS08093.1| MutS2 protein [Bacillus cereus VDM022]
Length = 786
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP +I + + +VITGPNTGGKT+ LKTVG+ V+MA+SGLHI + +++ F ++FA
Sbjct: 318 VPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFA 377
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ Q+LSTFS H+ I +I+ ++ +SLVL DE+GAGT+P EG AL +S+L+
Sbjct: 378 DIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEV 437
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ + +ATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A I++
Sbjct: 438 CNRGARV-VATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISK 496
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGL V+ AR + +I +I ++E + EA S LH+ L
Sbjct: 497 RLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHREL-- 554
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
+R+I+E +R K+ K K ++ +A Q + + +QLR +
Sbjct: 555 -QRQIIEFN-DERDEKLLK-----------AQKEGEEKVEAAKQEAEGIIQELRQLRKAQ 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRT---ELPNVG 755
L + ++ A+ +VK KQ VK T + G
Sbjct: 602 ---------------LINVKDHELIEAKSRLEGAAPELVK--KQKVNVKNTAPKQQLRAG 644
Query: 756 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
D V V +FG+KG +++ + S E VQ+G +K +K +++
Sbjct: 645 DEVKVLTFGQKGQLLE-KVSDTEWSVQIGILKMKVKESNM 683
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 57/298 (19%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKH 109
+LRVLE++K+ + +SLGR+ + S + +++ + L + T+ A I ++ H
Sbjct: 5 TLRVLEYNKVKEQLLEHTASSLGRDKVKNLVPSTD--FEEIVELQETTDEAAKVIRLKGH 62
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ L G+ S ++S I+ + S L P E + + + + S ++ + I +L
Sbjct: 63 ----VPLGGI--SDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMIDNGVEL 116
Query: 170 YIRFMPLTQM--LYQL---------------------------------------MDMLI 188
I + Q+ LY L ++ +
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMT 176
Query: 189 RNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDE 243
R+ N + + + V+ + R I + G ++ S+SG IEP V LN+
Sbjct: 177 RSSNAQKMLSDAIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNA 236
Query: 244 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 301
LQ+AR + E +L+ LTE++ V+ D + + + LD + A+A Y+ T P
Sbjct: 237 LQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
>gi|444410464|ref|ZP_21206998.1| MutS2 family protein [Streptococcus pneumoniae PNI0076]
gi|444277471|gb|ELU82978.1| MutS2 family protein [Streptococcus pneumoniae PNI0076]
Length = 778
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D++ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ Q LSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQRLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|421297876|ref|ZP_15748568.1| mutS2 protein [Streptococcus pneumoniae GA60080]
gi|395903960|gb|EJH14882.1| mutS2 protein [Streptococcus pneumoniae GA60080]
Length = 778
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|418069516|ref|ZP_12706793.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
gi|357536047|gb|EHJ20078.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
Length = 785
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 208/406 (51%), Gaps = 78/406 (19%)
Query: 206 RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R I AD S F G++ SSSG +EP + V LN++L+Q + + E+ +L L
Sbjct: 195 RYVIPVRADSRSRFGGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQVAEVHEEQRILQEL 254
Query: 263 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKV 322
+ + D ++ + LD++NA+A Y+ T P ++
Sbjct: 255 SALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP-------------------QI 295
Query: 323 SSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTN 382
S++ R I L +A HPL+
Sbjct: 296 STNNR---INLRQARHPLI----------------------------------------- 311
Query: 383 LSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHI 442
P ++ VP DI + + LVITGPNTGGKTI LKTVGL +MA+SG+ I
Sbjct: 312 -DPKKV----------VPNDIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFI 360
Query: 443 LSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGT 502
++E + V F+ +FADIGDEQS+ Q+LSTFS H+ +I+ +SL L DE+GAGT
Sbjct: 361 PANENSTVRVFEEIFADIGDEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGT 420
Query: 503 NPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYK 562
+P EG AL +++L+ + G+ ++I TTH+ ELKT Y NA MEFD L+PTYK
Sbjct: 421 DPKEGAALAIAILDRVRQRGA-VSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYK 479
Query: 563 ILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEM 608
+L G+PG+S+A I+ RLGL ++ AR L S ++N +I ++
Sbjct: 480 LLLGIPGQSNAFEISRRLGLDEDIITQARGLVDQDSQDLNNMIKDL 525
>gi|194397995|ref|YP_002037088.1| MutS2 family protein [Streptococcus pneumoniae G54]
gi|419490371|ref|ZP_14030113.1| MutS2 family protein [Streptococcus pneumoniae GA47179]
gi|419531679|ref|ZP_14071199.1| mutS2 family protein [Streptococcus pneumoniae GA47794]
gi|421274355|ref|ZP_15725187.1| MutS2 family protein [Streptococcus pneumoniae GA52612]
gi|238690853|sp|B5E7E8.1|MUTS2_STRP4 RecName: Full=MutS2 protein
gi|194357662|gb|ACF56110.1| MutS2 family protein [Streptococcus pneumoniae G54]
gi|379596651|gb|EHZ61455.1| MutS2 family protein [Streptococcus pneumoniae GA47179]
gi|379610005|gb|EHZ74742.1| mutS2 family protein [Streptococcus pneumoniae GA47794]
gi|395875083|gb|EJG86164.1| MutS2 family protein [Streptococcus pneumoniae GA52612]
Length = 778
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 214/389 (55%), Gaps = 46/389 (11%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRR---KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSA 680
L R + + L+ R K+ ++ ++ K + AA + + Q+ +
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKN- 585
Query: 681 SQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDI 740
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 586 ------LHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ-- 621
Query: 741 KQSPRVKRTELPNVGDLVHVSSFGKKGTV 769
+ K+ P VGD + V S+G++GT+
Sbjct: 622 ----KAKKKRAPKVGDDIVVLSYGQRGTL 646
>gi|83590547|ref|YP_430556.1| MutS2 family protein [Moorella thermoacetica ATCC 39073]
gi|83573461|gb|ABC20013.1| DNA mismatch repair protein, MutS family [Moorella thermoacetica
ATCC 39073]
Length = 801
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 210/391 (53%), Gaps = 32/391 (8%)
Query: 399 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 458
VP+ + + LVITGPNTGGKT+ LKT+GL +MA+ GLH+ +++ +V +V+A
Sbjct: 320 VPVSLTLGEDFDTLVITGPNTGGKTVTLKTMGLFTLMAQCGLHLPAADGTEVDVTAAVYA 379
Query: 459 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 518
DIGDEQS+ QSLSTFS H++QI I+ + + SLVLLDE+GAGT+P EG AL M++L+
Sbjct: 380 DIGDEQSIEQSLSTFSAHMRQIVAIVREVEAGSLVLLDELGAGTDPTEGAALAMAILDYL 439
Query: 519 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 578
G+ T+ATTH ELK Y+ ENA +EFD L+PTYK+L G PG S+A +A
Sbjct: 440 TGVGAR-TVATTHFSELKAYAYATPRVENAAVEFDSETLQPTYKLLIGTPGESNAFAVAG 498
Query: 579 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 638
RLGLP +++ AR + ++ +I + + EA + + + +
Sbjct: 499 RLGLPPALIEQARGFLSEENRRVSRLIEGLTADRRASARERAEAESLRREAEAAREAMEK 558
Query: 639 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 698
RR+ + A Q + A AR+++ ++ ++ R L+ + + L A
Sbjct: 559 ERREWQQQAARQ-------LEKAREEARAILRRARYEV-------RELMARVEKAL---A 601
Query: 699 SQSLHCTKVGKNQHVLTSNFQQTTV--DKVEHPATASSSVVKDIKQSPRVKRTELPNVGD 756
+SL Q VL+ Q+ D+VE V Q P R GD
Sbjct: 602 EESLRS-----QQQVLSRARQRLKELEDEVETGMERYQPVAGG--QPPEHLRA-----GD 649
Query: 757 LVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 787
V ++S+G+ G VI + E++VQVG +K
Sbjct: 650 RVFLASWGQVGEVISPPNEQGEVLVQVGALK 680
>gi|409351617|ref|ZP_11234250.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
gi|407876643|emb|CCK86308.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
Length = 788
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 221/417 (52%), Gaps = 38/417 (9%)
Query: 386 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
++ V L HP V DI + + ++ITGPNTGGKTI LKT+GL +MA+S
Sbjct: 300 TDQSVKLLAARHPLIDPKKVVANDICLGQDFDTVLITGPNTGGKTITLKTLGLLSLMAQS 359
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GL I ++E ++V FD +FADIGDEQS+ QSLSTFS H+ I I+ + TS+SLVL+DEI
Sbjct: 360 GLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDIVAIMKKVTSKSLVLIDEI 419
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG +L +S+L+ F + + + + TTH+ ELK YS + NA MEFD L
Sbjct: 420 GAGTDPEEGASLAISILDFFRKKQAKIMV-TTHYPELKLYGYSRERTTNASMEFDMKTLS 478
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTY++ G+PG S+A IA RLG+ VV +A +L ++IN +I E+ + +T+
Sbjct: 479 PTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSDINHMIDELNK-QTKL--- 534
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
E R L S + KNL + R L+ +QR +K QL
Sbjct: 535 ATENRQKLQSSLDRAKNLEKQLRDALD-IYNQRAQK--------------------QLDF 573
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+ +A +V K+ ++ + K G N + N + A +++ K
Sbjct: 574 AQERANEIVAKKRKKADKIIADLEEARKNGAN---IKENQLMDAKGEFNQLAKQEANLAK 630
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
+ KR + VGD V V S+G+ GTV K + E V +G +K + DI
Sbjct: 631 NKVLQKEKKRHHVA-VGDKVKVLSYGQTGTVTK-KLGDHEYEVALGRIKLKVSDRDI 685
>gi|307704257|ref|ZP_07641176.1| mutS2 protein [Streptococcus mitis SK597]
gi|307622168|gb|EFO01186.1| mutS2 protein [Streptococcus mitis SK597]
Length = 778
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 213/387 (55%), Gaps = 40/387 (10%)
Query: 389 QVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHIL 443
++ L + HP V D+ + +VITGPNTGGKTI LKT+GL +MA+SGL IL
Sbjct: 296 EIQLLHVCHPLVKNAVANDVHFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPIL 355
Query: 444 SSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTN 503
+ + ++V F+ +FADIGDEQS+ QSLSTFS H+ I +I+ + SL+LLDE+GAGT+
Sbjct: 356 ADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTD 415
Query: 504 PLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKI 563
P EG AL M++LE + T+ATTH+ ELK F +NA MEFD L+PTY+
Sbjct: 416 PQEGAALAMAILEDL-RLRQVKTMATTHYPELKVYGIETAFVQNASMEFDTATLRPTYRF 474
Query: 564 LWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEAR 623
+ GVPGRS+A IA+RLGL ++V +A Q + ++N +I ++E E E+R
Sbjct: 475 MQGVPGRSNAFEIAKRLGLSEVIVGDASQQVDQDN-DVNRIIEQLE-------EQTLESR 526
Query: 624 HFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQA 683
L R + + L+ R + + K +++ A A +V + + Q
Sbjct: 527 KRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQASEIVDMA----LSESDQI 582
Query: 684 RSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQS 743
+H ++ QL+P H K + ++ +KV+ + + V++
Sbjct: 583 LKNLHSKS-QLKP------HEIIEAK------AKLKKLAPEKVD---LSKNKVLQ----- 621
Query: 744 PRVKRTELPNVGDLVHVSSFGKKGTVI 770
+ K+ P VGD + V S+G++GT+I
Sbjct: 622 -KAKKKRAPKVGDDIVVLSYGQRGTLI 647
>gi|226323501|ref|ZP_03799019.1| hypothetical protein COPCOM_01276 [Coprococcus comes ATCC 27758]
gi|225208185|gb|EEG90539.1| MutS2 family protein [Coprococcus comes ATCC 27758]
Length = 791
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/597 (27%), Positives = 277/597 (46%), Gaps = 115/597 (19%)
Query: 206 RLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLAL 262
R C+ A+ S GL+ S GS IEP++ V LN++L++ A E++ + +
Sbjct: 194 RYCLPVKAEYRSQVNGLIHDQSATGSTLFIEPMAVVKLNNDLKELYAQ----EQEEIQVI 249
Query: 263 TEKMQVD----LDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPV 318
++ VD ++EI +++LD + A+ +L DM S PV
Sbjct: 250 LARLSVDAAEYIEEIRLNYKALVELDFIFAKGALAL-------------DMNAS---RPV 293
Query: 319 TSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGE 378
+ E I + + HPLL R+K+
Sbjct: 294 FNT------EGRIRIREGRHPLL----------------------DRKKV---------- 315
Query: 379 KDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 438
VPI + + +LVITGPNTGGKT+ LKTVGL +M ++
Sbjct: 316 --------------------VPISLTLGDTFDLLVITGPNTGGKTVSLKTVGLFTLMGQA 355
Query: 439 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 498
GLHI + + +++ F+ V+ADIGDEQS+ QSLSTFS H+ + + ++ SLVL DE+
Sbjct: 356 GLHIPALDRSELAVFNQVYADIGDEQSIEQSLSTFSSHMTNVVSFLNHVDENSLVLFDEL 415
Query: 499 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 558
GAGT+P EG AL +++L G + T+ATTH+ ELK S ENAC EFD L
Sbjct: 416 GAGTDPTEGAALAIAILSHLHNRG-IRTMATTHYSELKVFALSTPGVENACCEFDVETLS 474
Query: 559 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 618
PTY +L G+PG+S+A I+E+LGLP ++Q+A+ +++ ++E+ + +
Sbjct: 475 PTYHLLIGIPGKSNAFAISEKLGLPDYIIQDAKTHLTEEDESFEDLLTDLEQSRKTIEKE 534
Query: 619 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 678
E + L L + K+ +QR R ++ +A A A +V
Sbjct: 535 REEVASYRREMERLKSELKNQQEKL----DTQRDRIIR---EANARATDIVQ-------- 579
Query: 679 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 738
+A+ + + R S+ +++ K + + + T + + ++
Sbjct: 580 ---EAKDFADETMKNFRKFGKASISASEMEKERERIRKQLSK----------TENKNRLE 626
Query: 739 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 795
K S K ++ ++GD V V S GTV + +K + VQ+G ++ + +D+
Sbjct: 627 KKKPSKAYKASDF-HLGDSVKVLSMNLTGTVNSLPDAKGNLFVQMGILRSQVNISDL 682
>gi|42518575|ref|NP_964505.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|81703880|sp|Q74KU8.1|MUTS2_LACJO RecName: Full=MutS2 protein
gi|41582860|gb|AAS08471.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 788
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 278/573 (48%), Gaps = 111/573 (19%)
Query: 224 SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQL 283
S+SG +EP + + LN+ Q A + +L+ L+E + EI+ + + QL
Sbjct: 216 SASGQTLFVEPQAVLVLNNRQQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQL 275
Query: 284 DVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQ 343
D ++A++ + + T P L QD I L KA HPL+
Sbjct: 276 DFLSAKSKLAKAMKATEP--VLNQD--------------------HVIKLRKARHPLI-- 311
Query: 344 QHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDI 403
P ++ VP +I
Sbjct: 312 ----------------------------------------DPKKV----------VPNNI 321
Query: 404 FIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDE 463
+ ++ITGPNTGGKTI LKT+GL +MA++GL I + E +++ F+ ++ADIGDE
Sbjct: 322 ELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDE 381
Query: 464 QSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGS 523
QS+ QSLSTFS H+ QI I+ T LVL+DE+GAGT+P EG +L +++L+ + +
Sbjct: 382 QSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAILDDLRGAQA 441
Query: 524 LLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLP 583
+ I TTH+ ELK Y+ NA MEFD KL PTY++ G+PG+S+A IA +LG+
Sbjct: 442 KIAI-TTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMN 500
Query: 584 GIVVQNARQLYGAASAEINEVIIEMERF--KTQFLEHVHEARHFLMLSRNLHKNLLRTRR 641
+VV AR L ++IN++I ER +T+ E +HE L +N+ +++ T +
Sbjct: 501 EVVVDKARSLMNDEDSDINKMI---ERLTEQTKAAEQLHET-----LKQNVDQSI--TLK 550
Query: 642 KILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQS 701
+ L++ ++VQK + A K+ + L +A +++ +Q R A
Sbjct: 551 RQLQNGLDWYNQQVQKQLEKAQ------EKADEMLAKKRQKADKIINDLEEQRR--AGGQ 602
Query: 702 LHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVS 761
+ KV + + L + E+ A + V++ R KR +VGD V V
Sbjct: 603 VRTNKVIEAKGALNKL-------ERENQNLAQNKVLQ------REKRRHDVSVGDTVKVL 649
Query: 762 SFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTD 794
S+G++G + K + + E VQ+G +K +K TD
Sbjct: 650 SYGQQGVITK-KLADHEFEVQIGILK--VKVTD 679
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,071,950,153
Number of Sequences: 23463169
Number of extensions: 431772862
Number of successful extensions: 1426112
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8609
Number of HSP's successfully gapped in prelim test: 1587
Number of HSP's that attempted gapping in prelim test: 1397443
Number of HSP's gapped (non-prelim): 16174
length of query: 798
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 647
effective length of database: 8,816,256,848
effective search space: 5704118180656
effective search space used: 5704118180656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)