BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003750
(798 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 732 RRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNM 790
RRK+ W +E+ ILK GV+K+ + W KIL S F+ RT++ LKD+WR M
Sbjct: 364 RRKRQTWLWEEDRILKCGVKKYGEGN-----WAKIL---SHYKFNNRTSVMLKDRWRTM 414
>sp|F4I7L1|TRB4_ARATH Telomere repeat-binding factor 4 OS=Arabidopsis thaliana
GN=At1g17520 PE=2 SV=2
Length = 296
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 734 KKVPWTAKEEEILKKGVQKFASVDDRIIPWKKIL---EFGSSVFFSGRTAIDLKDKWRNM 790
+K+ WTA+EEE L GV+K WK IL E S R+ IDLKDKWRN+
Sbjct: 4 QKLKWTAEEEEALLAGVRKHGPGK-----WKNILRDPELAEQ--LSSRSNIDLKDKWRNL 56
Query: 791 C 791
Sbjct: 57 S 57
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 10/60 (16%)
Query: 734 KKVPWTAKEEEILKKGVQKFASVDDRIIPWKKIL---EFGSSVFFSGRTAIDLKDKWRNM 790
+K+ WTA+EEE L G++K WK IL EF + R+ IDLKDKWRN+
Sbjct: 4 QKLKWTAEEEEALLAGIRKHGPGK-----WKNILRDPEFADQLIH--RSNIDLKDKWRNL 56
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 417 ATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
+T G ++ C C K GQLL C TC H +CL P+K KG + CP C
Sbjct: 481 STDGDIHEDFCSVCRKSGQLLMCD--TCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 417 ATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
+T G ++ C C K GQLL C TC H +CL P+K KG + CP C
Sbjct: 461 STDGDIHEDFCSVCRKSGQLLMCD--TCSRVYHLDCLEPPLKTIPKGMWICPRC 512
>sp|Q8VWK4|TRB1_ARATH Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1
PE=1 SV=1
Length = 300
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Query: 738 WTAKEEEILKKGVQKFASVDDRIIPWKKIL---EFGSSVFFSGRTAIDLKDKWRNM 790
WT +EE LK GV K W+ IL EF ++ R+ +DLKDKWRNM
Sbjct: 8 WTQEEESALKSGVIKHGPGK-----WRTILKDPEFSGVLYL--RSNVDLKDKWRNM 56
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 417 ATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDE--KGNFHCPFCAYTL 474
+T + ++ C CN+ G L C TCP + H CL P+ + KG++HC C + +
Sbjct: 253 STIDFENEDFCSACNQSGSFLCC--DTCPKSFHFLCLDPPIDPNNLPKGDWHCNECKFKI 310
Query: 475 SISEYLEAKKR 485
I+ + K+
Sbjct: 311 FINNSMATLKK 321
>sp|Q9M2X3|TRB3_ARATH Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3
PE=1 SV=1
Length = 295
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 735 KVPWTAKEEEILKKGVQKFASVDDRIIPWKKIL-EFGSSVFFSGRTAIDLKDKWRNMC 791
K+ WT +EE LK GV K + W+ IL + S R+ +DLKDKWRN+
Sbjct: 5 KLKWTPEEETALKAGVLKHGTGK-----WRTILSDPVYSTILKSRSNVDLKDKWRNIS 57
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 734 KKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNM 790
KK WT +E E +K GVQK+ + W I + F RTA+ +KD+WR M
Sbjct: 446 KKQKWTVEESEWVKAGVQKYGEGN-----WAAI---SKNYPFVNRTAVMIKDRWRTM 494
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 40.4 bits (93), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 424 QNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCA 471
Q C C G+LL C S CP A H CL P+ G++ CP C+
Sbjct: 437 QEFCRVCKDGGELLCCDS--CPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 424 QNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
Q+ C C + G+++ C TCP A H CL + +G + CP C
Sbjct: 377 QDYCEVCQQGGEIILCD--TCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|O55036|TERF1_CRIGR Telomeric repeat-binding factor 1 (Fragment) OS=Cricetulus griseus
GN=TERF1 PE=2 SV=1
Length = 438
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 733 RKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCK 792
RK+ W +E++ L+ GV+K+ + W KIL F+ RT++ LKD+WR M K
Sbjct: 378 RKRQAWLWEEDKNLRSGVRKYGEGN-----WSKILLHYK---FNNRTSVMLKDRWRTMKK 429
>sp|P54274|TERF1_HUMAN Telomeric repeat-binding factor 1 OS=Homo sapiens GN=TERF1 PE=1
SV=3
Length = 439
Score = 40.0 bits (92), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 733 RKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCK 792
RK+ W +E++ L+ GV+K+ + W KIL F+ RT++ LKD+WR M K
Sbjct: 378 RKRQAWLWEEDKNLRSGVRKYGEGN-----WSKILLHYK---FNNRTSVMLKDRWRTMKK 429
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 39.7 bits (91), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 423 EQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
++ C C+ G LL C S CP H CL P+K KG++ CP C
Sbjct: 34 DEEYCKVCSDGGDLLCCDS--CPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 39.7 bits (91), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 734 KKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCK 792
KK WT +E E +K GV+K+ + R WK I E F RT++ +KD++R M K
Sbjct: 664 KKQKWTVQESEWIKDGVRKYG--EGR---WKTISE---KYPFQNRTSVQIKDRYRTMKK 714
>sp|O35144|TERF2_MOUSE Telomeric repeat-binding factor 2 OS=Mus musculus GN=Terf2 PE=1
SV=3
Length = 541
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 734 KKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCK 792
+K WT +E E +K GV+K+ + W I S F RTA+ +KD+WR M K
Sbjct: 487 RKQKWTIEESEWVKDGVRKYGEGN-----WAAI---SKSYPFVNRTAVMIKDRWRTMKK 537
>sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2
PE=1 SV=1
Length = 299
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 735 KVPWTAKEEEILKKGVQKFASVDDRIIPWKKIL---EFGSSVFFSGRTAIDLKDKWRNMC 791
K WT +EE LK GV K + W+ IL EF S+ R+ +DLKDKWRN+
Sbjct: 5 KQKWTPEEEAALKAGVLKHGTGK-----WRTILSDTEF--SLILKSRSNVDLKDKWRNIS 57
>sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1
Length = 531
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 427 CVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
C C + L C TCP A H +CL P+K KG + CP C
Sbjct: 355 CAACKRGANLQPCG--TCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
>sp|B3M0F3|SLX1_DROAN Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
ananassae GN=slx1 PE=3 SV=1
Length = 299
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 395 IDVAVKKSHFLSSQAALGHDSLATS--GWT-EQNLCVKC--NKDGQLLSCSSSTCPLAVH 449
+++ K SSQ G D+ AT W E +LC++ + L C++ TC L H
Sbjct: 165 MEIVSGKVSISSSQRRKGEDAAATVPVAWAPECHLCMQRIDQPERSRLGCTNPTCRLTCH 224
Query: 450 ENCLGFPVKFDEKGNF-----HCPFCAYTLSISEYLEAKKRASVARKEL 493
CL + DE G++ CP C LS S L+ K+ + +EL
Sbjct: 225 MLCLANYLLGDEPGHYIPVGGECPLCETRLSWSALLQRKRLLNGIPEEL 273
>sp|Q8MT36|MES4_DROME Probable histone-lysine N-methyltransferase Mes-4 OS=Drosophila
melanogaster GN=Mes-4 PE=1 SV=2
Length = 1427
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 427 CVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
C C K G+L+ C TCP+AVH +C P+K +E ++ C C
Sbjct: 1002 CYICVKGGELVCCE--TCPIAVHAHCRNIPIKTNE--SYICEEC 1041
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 427 CVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRA 486
C C GQL+SC CP H +CL + G + CP+ +
Sbjct: 2019 CFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECPW--------------HQC 2062
Query: 487 SVARKELAAFMQM--GSVCHQ 505
V KE A+F +M S C Q
Sbjct: 2063 DVCGKEAASFCEMCPSSFCKQ 2083
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 403 HFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEK 462
HF + H+ + S W C C++ G LL C S CP A H CL + +
Sbjct: 1590 HFTPRRGCRNHEHVNVS-W-----CFVCSEGGSLLCCDS--CPAAFHRECLNIDIP---E 1638
Query: 463 GNFHCPFC 470
GN++C C
Sbjct: 1639 GNWYCNDC 1646
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 423 EQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
++N+C C K G+LL C + C A H CLG P +G F C C
Sbjct: 1440 KENVCQNCEKLGELLLCEAQCC-GAFHLECLGLPEM--PRGKFICNEC 1484
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 37.0 bits (84), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 423 EQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLS 475
++N C C + L+SC+ TC A H CL P+K N+ CP C L+
Sbjct: 48 KENACQACGESTNLVSCN--TCTYAFHAKCLVPPLKDASVENWRCPECVSPLN 98
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 400 KKSHFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKF 459
KK L A G + + Q+ C C + G+++ C TCP A H CL +
Sbjct: 355 KKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEIILCD--TCPRAYHLVCLDPELDR 412
Query: 460 DEKGNFHCPFC 470
+G + CP C
Sbjct: 413 APEGKWSCPHC 423
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 36.6 bits (83), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 427 CVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRA 486
C C+++GQ+L C CP H CL + + +G++ CP C ++++E +E + +A
Sbjct: 91 CWVCHREGQVLCC--ELCPRVYHAKCLR--LTSEPEGDWFCPECE-KITVAECIETQSKA 145
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 36.6 bits (83), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 427 CVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRA 486
C C GQL+SC CP H +CL + G + CP+ +
Sbjct: 2121 CFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECPW--------------HQC 2164
Query: 487 SVARKELAAFMQM--GSVCHQ 505
+ KE A+F +M S C Q
Sbjct: 2165 DICGKEAASFCEMCPSSFCKQ 2185
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 403 HFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEK 462
HF + H+ + S W C C++ G LL C S CP A H CL + +
Sbjct: 1692 HFTPRRGCRNHEHVNVS-W-----CFVCSEGGSLLCCDS--CPAAFHRECLNIDI---PE 1740
Query: 463 GNFHCPFC 470
GN++C C
Sbjct: 1741 GNWYCNDC 1748
>sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=Phf21b PE=2 SV=1
Length = 487
Score = 36.2 bits (82), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 422 TEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
T C C + L C TC A H +CL P+K KG + CP C
Sbjct: 305 THDEFCAACKRGASLQPCG--TCSGAYHLSCLDPPLKTPPKGLWVCPKC 351
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 426 LCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCA 471
C C G+LL C TCP + H +CL P+ G + CP C
Sbjct: 444 FCRVCKDGGELLCCD--TCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 424 QNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
Q+ C C + G+++ C TCP A H CL ++ +G + CP C
Sbjct: 363 QDYCEVCQQGGEIILCD--TCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 426 LCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCA 471
C C G+LL C TCP + H +CL P+ G + CP C
Sbjct: 451 FCRVCKDGGELLCCD--TCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 424 QNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
Q+ C C + G+++ C TCP A H CL ++ +G + CP C
Sbjct: 370 QDYCEVCQQGGEIILCD--TCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 425 NLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
+ C +C +DG+LL C TCP A H C+ ++ +G++ C C
Sbjct: 257 DYCEECKQDGELLLCD--TCPRAYHTVCIDENMEEPPEGDWSCAHC 300
>sp|B4JGW7|SLX1_DROGR Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
grimshawi GN=slx1 PE=3 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 435 QLLSCSSSTCPLAVHENCLGFPVKFDEKGNF-----HCPFCAYTLSISEYLE 481
+LL C ++CPL H CL + D+ G + CP C LS +E L
Sbjct: 198 RLLGCLRASCPLTCHMLCLASYLLGDQPGQYIPIGGTCPLCELPLSWAELLR 249
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 424 QNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
Q+ C C + G+++ C TCP A H CL ++ +G + CP C
Sbjct: 343 QDYCEVCQQGGEIILCD--TCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 426 LCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCA 471
C C G+LL C + CP + H +CL P+ G + CP C
Sbjct: 418 FCRVCKDGGELLCCDA--CPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
>sp|B4GEU1|SLX1_DROPE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
persimilis GN=slx1 PE=3 SV=1
Length = 291
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 437 LSCSSSTCPLAVHENCLGFPVKFDEKGNF-----HCPFCAYTLSISEYLEAKK 484
L C++ TC L H CL + DE G + CP C LS S L+ K+
Sbjct: 204 LGCTNPTCRLTCHMLCLASYLLGDEPGQYIPIGGECPLCETRLSWSALLQRKR 256
>sp|Q9SXQ6|FEN11_ORYSJ Flap endonuclease 1-A OS=Oryza sativa subsp. japonica GN=FEN-1a
PE=2 SV=1
Length = 380
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 30/136 (22%)
Query: 293 LEESQFPD----DGCDNCDDLRRLG---------QNGDVNDDQIQHNQAEDGHNAARLPR 339
L QF D GCD CD ++ +G Q+G + + I N +D + ++P
Sbjct: 219 LTMDQFIDLCILSGCDYCDSIKGIGGQTALKLIRQHGSI--ESILENINKDRY---QIPE 273
Query: 340 AEPVQNA--TVDEANITERVPSVGTQHEDTEDESRGEVEHSCEEETLSDNDAYHNDRIDV 397
P Q A E N+T +P + D E G VE +E + ++ DR+
Sbjct: 274 DWPYQEARRLFKEPNVTLDIPELKWNAPDEE----GLVEFLVKE------NGFNQDRVTK 323
Query: 398 AVKKSHFLSSQAALGH 413
A++K F ++++ G
Sbjct: 324 AIEKIKFAKNKSSQGR 339
>sp|B3P230|SLX1_DROER Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
erecta GN=slx1 PE=3 SV=2
Length = 294
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 437 LSCSSSTCPLAVHENCLGFPVKFDEKGNF-----HCPFCAYTLSISEYLEAKKRASVARK 491
L C++ C L H CL + DE G++ CP C LS + L+ K+ K
Sbjct: 212 LGCTNQMCRLTCHMMCLANYLLGDEPGHYIPVGGQCPLCENRLSWAALLQRKRLLLGVPK 271
Query: 492 ELAAF 496
EL +
Sbjct: 272 ELRDY 276
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 416 LATSGW--TEQNLCVKCNK---DGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
+ + GW E +C C K G+LL C C ++ H CL P++ KG + C +C
Sbjct: 997 VLSKGWRCLECTVCEACGKATDPGRLLLCDD--CDISYHTYCLDPPLQTVPKGGWKCKWC 1054
Query: 471 AY 472
+
Sbjct: 1055 VW 1056
>sp|Q9S7G7|MB3R1_ARATH Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2
SV=1
Length = 776
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 729 PQLRRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWR 788
P R K WT +E+E+L K V++F + WKKI E F RT + +W+
Sbjct: 29 PARRSTKGQWTPEEDEVLCKAVERFQGKN-----WKKIAE-----CFKDRTDVQCLHRWQ 78
Query: 789 NM 790
+
Sbjct: 79 KV 80
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 416 LATSGW--TEQNLCVKCNK---DGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFC 470
+ + GW E +C C K G+LL C C ++ H CL P++ KG + C +C
Sbjct: 990 VLSKGWRCLECTVCEACGKATDPGRLLLCDD--CDISYHTYCLDPPLQTVPKGGWKCKWC 1047
Query: 471 AY 472
+
Sbjct: 1048 VW 1049
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 314,310,151
Number of Sequences: 539616
Number of extensions: 14037275
Number of successful extensions: 43731
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 42837
Number of HSP's gapped (non-prelim): 937
length of query: 798
length of database: 191,569,459
effective HSP length: 126
effective length of query: 672
effective length of database: 123,577,843
effective search space: 83044310496
effective search space used: 83044310496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)