Query 003752
Match_columns 798
No_of_seqs 266 out of 1381
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 02:56:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003752.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003752hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.6 1.8E-15 6.1E-20 130.6 6.6 69 90-158 6-75 (79)
2 1wjz_A 1700030A21RIK protein; 99.6 3.6E-15 1.2E-19 132.6 8.6 69 90-158 15-90 (94)
3 2och_A Hypothetical protein DN 99.6 2.3E-15 7.9E-20 128.4 6.1 68 86-156 3-71 (73)
4 2yua_A Williams-beuren syndrom 99.6 2E-15 7E-20 136.2 5.9 69 90-158 16-85 (99)
5 2ej7_A HCG3 gene; HCG3 protein 99.6 5E-15 1.7E-19 128.7 7.7 68 91-158 9-78 (82)
6 1hdj_A Human HSP40, HDJ-1; mol 99.6 3.8E-15 1.3E-19 128.1 6.9 69 90-159 2-71 (77)
7 2ctp_A DNAJ homolog subfamily 99.6 7.1E-15 2.4E-19 126.7 8.6 69 90-159 6-75 (78)
8 2ctq_A DNAJ homolog subfamily 99.5 1.8E-15 6E-20 139.6 4.4 70 90-159 19-89 (112)
9 2cug_A Mkiaa0962 protein; DNAJ 99.5 8E-15 2.8E-19 129.5 6.8 70 88-158 14-84 (88)
10 1bq0_A DNAJ, HSP40; chaperone, 99.5 5.7E-15 1.9E-19 134.1 4.7 70 90-159 2-72 (103)
11 2ctr_A DNAJ homolog subfamily 99.5 1E-14 3.5E-19 128.9 6.0 67 90-157 6-73 (88)
12 2dmx_A DNAJ homolog subfamily 99.5 1.1E-14 3.8E-19 129.4 5.8 69 91-159 9-79 (92)
13 2lgw_A DNAJ homolog subfamily 99.5 1.3E-14 4.4E-19 131.5 5.7 69 91-159 2-72 (99)
14 2ctw_A DNAJ homolog subfamily 99.5 1.7E-14 5.7E-19 132.6 6.4 67 90-156 16-83 (109)
15 2o37_A Protein SIS1; HSP40, J- 99.5 1.9E-14 6.4E-19 128.3 5.5 69 86-157 3-72 (92)
16 3hho_A CO-chaperone protein HS 99.5 4.2E-13 1.4E-17 132.9 13.6 68 90-157 3-78 (174)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.5 3.5E-14 1.2E-18 130.0 5.3 72 87-158 11-87 (109)
18 3apq_A DNAJ homolog subfamily 99.4 1.4E-13 4.6E-18 136.9 5.6 69 91-159 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.4 1.3E-13 4.4E-18 133.5 4.1 67 91-157 10-83 (155)
20 1fpo_A HSC20, chaperone protei 99.4 2.9E-12 1E-16 126.6 13.0 67 91-157 1-75 (171)
21 2ys8_A RAB-related GTP-binding 99.3 5.6E-13 1.9E-17 118.5 3.8 62 89-151 25-87 (90)
22 1gh6_A Large T antigen; tumor 99.3 3E-13 1E-17 125.8 -0.6 61 91-155 8-71 (114)
23 3bvo_A CO-chaperone protein HS 99.3 1.3E-11 4.5E-16 125.5 10.7 67 91-157 43-117 (207)
24 3lz8_A Putative chaperone DNAJ 99.3 5.2E-13 1.8E-17 144.3 0.0 65 91-156 28-93 (329)
25 2pf4_E Small T antigen; PP2A, 99.2 9.5E-13 3.2E-17 130.6 0.3 62 91-156 11-75 (174)
26 1faf_A Large T antigen; J doma 99.2 2.5E-12 8.7E-17 111.9 2.5 59 91-153 11-72 (79)
27 1n4c_A Auxilin; four helix bun 99.2 2.3E-12 7.9E-17 128.7 1.2 62 91-152 117-182 (182)
28 1iur_A KIAA0730 protein; DNAJ 99.2 3.5E-12 1.2E-16 113.4 1.7 59 91-149 16-76 (88)
29 3uo3_A J-type CO-chaperone JAC 99.2 8.2E-12 2.8E-16 124.6 3.3 65 90-157 10-82 (181)
30 2guz_A Mitochondrial import in 99.1 1.3E-11 4.4E-16 105.2 2.0 55 91-149 14-70 (71)
31 2qwo_B Putative tyrosine-prote 99.1 1.1E-11 3.7E-16 111.4 1.2 55 91-145 33-91 (92)
32 3ag7_A Putative uncharacterize 99.1 1.7E-11 5.7E-16 112.6 1.4 56 91-147 41-104 (106)
33 3apo_A DNAJ homolog subfamily 99.1 1.3E-11 4.6E-16 144.8 0.8 71 89-159 19-90 (780)
34 2y4t_A DNAJ homolog subfamily 98.5 7.4E-08 2.5E-12 101.6 5.2 65 91-155 382-450 (450)
35 2guz_B Mitochondrial import in 98.0 2.6E-06 9E-11 71.8 3.7 49 93-145 6-58 (65)
36 4gb5_A Uncharacterized protein 91.0 0.36 1.2E-05 45.1 6.5 62 734-795 79-140 (159)
37 2pzi_A Probable serine/threoni 87.5 0.26 8.8E-06 57.1 3.1 47 89-142 627-675 (681)
38 3k7c_A Putative NTF2-like tran 86.2 1.2 4.2E-05 41.3 6.3 37 740-790 76-112 (114)
39 3soy_A NTF2-like superfamily p 84.8 1.2 4E-05 41.8 5.6 58 730-792 72-131 (145)
40 2cw9_A Translocase of inner mi 83.5 4.1 0.00014 40.5 9.2 96 694-794 76-187 (194)
41 3b8l_A Uncharacterized protein 83.5 3.7 0.00012 38.3 8.4 56 734-795 94-150 (163)
42 3a76_A Gamma-hexachlorocyclohe 81.6 4 0.00014 39.0 8.1 21 775-795 132-152 (176)
43 2qgu_A Probable signal peptide 80.5 1.4 4.8E-05 44.5 4.6 54 726-794 115-168 (211)
44 3bb9_A Putative orphan protein 79.0 3.8 0.00013 37.7 6.7 44 741-791 100-144 (148)
45 2b1x_B Naphthalene dioxygenase 78.3 6.7 0.00023 37.4 8.4 58 733-795 98-157 (172)
46 2rgq_A Domain of unknown funct 78.0 5.7 0.0002 36.4 7.6 55 733-795 72-126 (144)
47 3gwr_A Putative calcium/calmod 76.8 8.3 0.00028 36.0 8.4 103 673-792 8-123 (144)
48 2rfr_A Uncharacterized protein 76.5 3 0.0001 38.2 5.2 47 742-794 93-139 (155)
49 3eby_A Beta subunit of A putat 76.2 4.1 0.00014 38.8 6.2 22 774-795 128-149 (163)
50 2chc_A Protein RV3472; hypothe 74.8 5.1 0.00018 37.5 6.5 47 742-795 83-130 (170)
51 2gxf_A Hypothetical protein YY 74.7 6.2 0.00021 35.9 6.9 109 674-790 4-117 (142)
52 3ma5_A Tetratricopeptide repea 74.3 24 0.00083 29.5 10.1 77 179-271 16-92 (100)
53 3f7s_A Uncharacterized NTF2-li 72.8 7.9 0.00027 35.0 7.0 19 773-791 104-122 (142)
54 3gw4_A Uncharacterized protein 72.6 17 0.00058 33.0 9.3 84 179-272 116-199 (203)
55 3fka_A Uncharacterized NTF-2 l 72.0 6 0.00021 35.9 6.0 62 708-791 53-114 (120)
56 2yhc_A BAMD, UPF0169 lipoprote 71.9 70 0.0024 30.4 19.8 196 179-429 13-208 (225)
57 3gzr_A Uncharacterized protein 71.4 8.5 0.00029 35.9 7.0 49 742-794 79-127 (146)
58 3duk_A NTF2-like protein of un 71.0 5.7 0.00019 36.3 5.6 44 733-792 76-119 (125)
59 3ef8_A Putative scyalone dehyd 70.7 15 0.0005 34.0 8.5 63 726-795 68-131 (150)
60 3hx8_A MLR2180 protein, putati 70.4 12 0.0004 32.5 7.4 42 741-791 75-120 (129)
61 3d9r_A Ketosteroid isomerase-l 70.4 12 0.0004 32.9 7.4 55 732-792 73-128 (135)
62 3blz_A NTF2-like protein of un 70.2 7.6 0.00026 35.0 6.2 43 734-792 78-120 (128)
63 3ejv_A Uncharacterized protein 70.0 20 0.00067 34.7 9.5 20 776-795 152-171 (179)
64 3qk9_A Mitochondrial import in 67.4 25 0.00085 36.0 9.9 97 694-793 99-214 (222)
65 4i4k_A Uncharacterized protein 65.1 18 0.00063 33.2 7.8 47 742-794 91-137 (143)
66 2gbw_B Biphenyl 2,3-dioxygenas 65.0 12 0.00041 36.0 6.7 56 734-795 103-159 (174)
67 3gzx_B Biphenyl dioxygenase su 64.3 19 0.00065 35.5 8.2 75 711-795 87-171 (186)
68 3cu3_A Domain of unknown funct 63.8 13 0.00043 35.0 6.6 21 774-794 115-135 (172)
69 3e99_A Benzoate 1,2-dioxygenas 61.5 13 0.00045 35.8 6.3 22 774-795 128-149 (164)
70 3h51_A Putative calcium/calmod 61.2 24 0.0008 32.6 7.8 17 669-685 16-32 (156)
71 2ux0_A Calcium-calmodulin depe 60.3 24 0.00081 31.7 7.6 20 773-792 113-132 (143)
72 3hzp_A NTF2-like protein of un 59.0 25 0.00086 33.3 7.4 50 733-792 66-117 (131)
73 2kat_A Uncharacterized protein 58.1 79 0.0027 26.3 10.1 77 179-271 28-104 (115)
74 4a1s_A PINS, partner of inscut 53.7 1.2E+02 0.0039 30.9 12.3 64 179-250 57-120 (411)
75 1uli_B Biphenyl dioxygenase sm 53.0 31 0.0011 33.6 7.5 57 733-795 112-172 (187)
76 2f86_B Hypothetical protein K1 52.9 31 0.0011 32.3 7.2 20 773-792 109-128 (143)
77 2xcb_A PCRH, regulatory protei 52.7 52 0.0018 28.9 8.4 77 179-270 61-137 (142)
78 3qww_A SET and MYND domain-con 52.0 61 0.0021 35.7 10.5 81 179-268 349-432 (433)
79 2rsx_A Uncharacterized protein 50.9 26 0.00087 34.3 6.3 46 733-793 111-156 (159)
80 3mkr_A Coatomer subunit epsilo 49.9 98 0.0033 31.2 11.0 45 370-429 180-224 (291)
81 3qwp_A SET and MYND domain-con 49.4 62 0.0021 35.5 10.0 64 179-249 338-404 (429)
82 3rob_A Uncharacterized conserv 48.6 49 0.0017 30.6 7.7 51 734-791 80-131 (139)
83 1qqe_A Vesicular transport pro 45.2 2.4E+02 0.0082 27.9 15.4 66 177-250 44-111 (292)
84 2vgx_A Chaperone SYCD; alterna 45.1 84 0.0029 28.2 8.7 77 179-270 64-140 (148)
85 1wql_B Ethylbenzene dioxygenas 44.6 41 0.0014 32.8 6.8 57 733-795 111-171 (186)
86 3ro3_A PINS homolog, G-protein 44.5 1.2E+02 0.0042 25.3 9.2 64 179-250 58-123 (164)
87 3upv_A Heat shock protein STI1 44.0 1.3E+02 0.0045 25.2 9.4 79 179-269 47-125 (126)
88 3ma5_A Tetratricopeptide repea 42.5 30 0.001 28.9 4.8 44 371-429 22-65 (100)
89 3ro3_A PINS homolog, G-protein 42.4 43 0.0015 28.3 5.9 66 179-250 98-163 (164)
90 3ro2_A PINS homolog, G-protein 40.9 2.1E+02 0.007 27.3 11.2 64 179-250 14-77 (338)
91 2v5f_A Prolyl 4-hydroxylase su 40.8 72 0.0025 27.1 7.1 34 214-249 5-38 (104)
92 2r4i_A Uncharacterized protein 39.4 71 0.0024 27.3 6.9 17 778-794 103-119 (123)
93 2bmo_B Oxygenase-beta NBDO; ni 39.3 53 0.0018 32.4 6.7 56 733-794 119-178 (194)
94 3cnx_A Uncharacterized protein 37.2 64 0.0022 31.3 6.8 19 774-792 133-151 (170)
95 3fsd_A NTF2-like protein of un 36.6 1.1E+02 0.0036 27.4 7.8 15 780-794 114-130 (134)
96 4eqf_A PEX5-related protein; a 35.9 3.4E+02 0.012 27.0 18.8 44 371-429 262-305 (365)
97 3gw4_A Uncharacterized protein 35.8 1.3E+02 0.0043 27.0 8.3 65 179-250 75-141 (203)
98 3kuv_A Fluoroacetyl coenzyme A 35.5 2.4E+02 0.0082 26.5 10.3 92 688-797 24-121 (139)
99 4gyw_A UDP-N-acetylglucosamine 35.0 6.1E+02 0.021 29.6 16.8 55 179-245 18-72 (723)
100 2xev_A YBGF; tetratricopeptide 34.5 1.2E+02 0.0042 25.1 7.5 58 179-245 48-105 (129)
101 3n71_A Histone lysine methyltr 34.5 1.4E+02 0.0049 33.3 10.0 64 179-249 360-426 (490)
102 3k9i_A BH0479 protein; putativ 34.4 45 0.0015 28.2 4.8 44 371-429 42-85 (117)
103 3k9i_A BH0479 protein; putativ 34.3 1.2E+02 0.004 25.5 7.4 55 179-245 36-90 (117)
104 3cv0_A Peroxisome targeting si 32.6 3.4E+02 0.012 26.0 13.1 201 179-429 64-310 (327)
105 2xcb_A PCRH, regulatory protei 32.3 49 0.0017 29.0 4.8 44 371-429 67-110 (142)
106 2kat_A Uncharacterized protein 32.3 1E+02 0.0035 25.6 6.6 56 352-429 22-77 (115)
107 2rcd_A Uncharacterized protein 31.8 1.2E+02 0.0041 26.8 7.3 19 775-793 105-123 (129)
108 2l6j_A TPR repeat-containing p 31.2 76 0.0026 25.5 5.5 44 371-429 19-62 (111)
109 2xev_A YBGF; tetratricopeptide 30.9 1.5E+02 0.0051 24.5 7.5 58 179-245 11-68 (129)
110 2lni_A Stress-induced-phosphop 29.4 1.1E+02 0.0036 25.2 6.2 45 370-429 64-108 (133)
111 2yhc_A BAMD, UPF0169 lipoprote 28.7 3.4E+02 0.012 25.5 10.4 131 106-245 21-176 (225)
112 1idp_A Scytalone dehydratase; 28.6 1.5E+02 0.0051 28.8 7.8 54 742-795 96-150 (172)
113 4gcn_A Protein STI-1; structur 28.3 1.9E+02 0.0066 24.9 8.0 60 179-245 51-112 (127)
114 3fp2_A TPR repeat-containing p 28.2 4.1E+02 0.014 27.8 11.9 58 356-429 243-300 (537)
115 2y4t_A DNAJ homolog subfamily 27.9 5E+02 0.017 26.4 15.1 44 371-429 310-353 (450)
116 2kc7_A BFR218_protein; tetratr 27.5 78 0.0027 25.4 4.9 43 372-429 16-59 (99)
117 3fp2_A TPR repeat-containing p 27.4 5.5E+02 0.019 26.8 13.3 181 183-429 215-402 (537)
118 3ieg_A DNAJ homolog subfamily 27.2 4.3E+02 0.015 25.5 16.9 46 371-431 287-332 (359)
119 2vgx_A Chaperone SYCD; alterna 26.9 67 0.0023 28.8 4.8 44 371-429 70-113 (148)
120 3sf4_A G-protein-signaling mod 26.7 2.9E+02 0.0098 27.5 9.9 20 179-198 236-255 (406)
121 3gyz_A Chaperone protein IPGC; 26.5 62 0.0021 29.9 4.5 44 371-429 85-128 (151)
122 2xpi_A Anaphase-promoting comp 25.5 6.4E+02 0.022 26.9 14.5 44 371-429 456-499 (597)
123 3sz7_A HSC70 cochaperone (SGT) 25.4 76 0.0026 28.3 4.8 44 371-429 26-69 (164)
124 3gyz_A Chaperone protein IPGC; 25.3 66 0.0022 29.7 4.5 57 351-429 38-94 (151)
125 3upv_A Heat shock protein STI1 25.0 84 0.0029 26.5 4.8 56 352-429 41-96 (126)
126 1na3_A Designed protein CTPR2; 24.6 97 0.0033 23.9 4.8 44 371-429 24-67 (91)
127 3uq3_A Heat shock protein STI1 23.7 4.2E+02 0.014 24.2 16.0 44 371-429 188-231 (258)
128 1hxi_A PEX5, peroxisome target 23.4 1.6E+02 0.0056 25.3 6.5 56 352-429 20-75 (121)
129 3iqc_A FLIS, flagellar protein 23.2 1.4E+02 0.0046 27.9 6.1 67 213-282 35-101 (131)
130 3sz7_A HSC70 cochaperone (SGT) 23.1 88 0.003 27.8 4.8 56 352-429 48-103 (164)
131 1w3b_A UDP-N-acetylglucosamine 22.4 6E+02 0.02 25.5 15.0 45 370-429 319-363 (388)
132 2dba_A Smooth muscle cell asso 21.8 1.1E+02 0.0038 25.7 4.9 44 371-429 80-123 (148)
133 3sf4_A G-protein-signaling mod 21.6 5.9E+02 0.02 25.1 14.9 64 179-250 18-81 (406)
134 1hxi_A PEX5, peroxisome target 21.2 2.7E+02 0.0093 23.8 7.5 56 178-245 25-80 (121)
135 1pc2_A Mitochondria fission pr 21.1 2E+02 0.007 27.5 7.1 64 349-429 32-95 (152)
136 2lni_A Stress-induced-phosphop 21.0 81 0.0028 26.0 3.8 43 372-429 32-74 (133)
137 4gco_A Protein STI-1; structur 20.8 2.8E+02 0.0095 24.0 7.5 56 178-245 55-110 (126)
138 2ijq_A Hypothetical protein; s 20.7 4.5E+02 0.016 25.4 9.5 88 176-268 39-130 (161)
139 2cwz_A Thioesterase family pro 20.5 4.9E+02 0.017 23.8 10.9 79 701-796 32-115 (141)
140 1na0_A Designed protein CTPR3; 20.5 1.3E+02 0.0045 24.0 5.0 44 371-429 24-67 (125)
141 3jum_A Phenazine biosynthesis 20.5 2.6E+02 0.009 27.5 7.9 52 733-797 105-158 (185)
142 2q78_A Uncharacterized protein 20.4 5.7E+02 0.02 24.5 10.5 83 699-797 44-129 (153)
143 2gex_A SNOL; alpha+beta barrel 20.4 4.6E+02 0.016 23.4 9.8 30 670-704 1-30 (152)
144 4abn_A Tetratricopeptide repea 20.3 8.1E+02 0.028 26.2 17.2 50 368-429 233-282 (474)
145 1elr_A TPR2A-domain of HOP; HO 20.2 1.3E+02 0.0045 24.4 4.9 44 371-429 19-62 (131)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1.8e-15 Score=130.65 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=62.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+.++|+.|++||++|+||.+|..||..+..
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 46999999999999999999999999987 7999876556778999999999999999999999997643
No 2
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.57 E-value=3.6e-15 Score=132.63 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=61.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCC------hHHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFS------PDALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s------~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
..|||+||||+++|+.+|||+|||+++++ |||+... .....++|+.|++||+||+||.+|+.||..+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 46999999999999999999999999998 7999652 245778999999999999999999999998864
No 3
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.56 E-value=2.3e-15 Score=128.38 Aligned_cols=68 Identities=21% Similarity=0.342 Sum_probs=59.4
Q ss_pred ccccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcc
Q 003752 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (798)
Q Consensus 86 ~m~iplDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l 156 (798)
.|....|||+||||+++|+.++||+|||+++++ |||++.+. .++|+.|++||++|+||.+|..||...
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 467788999999999999999999999999987 79997543 368999999999999999999999865
No 4
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2e-15 Score=136.21 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=62.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
..|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||..+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 35899999999999999999999999987 7999866566788999999999999999999999997754
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=5e-15 Score=128.72 Aligned_cols=68 Identities=22% Similarity=0.335 Sum_probs=61.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~-~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
.|||+||||+++|+.++||+|||+++++ |||++... +.+.++|+.|++||++|+||.+|..||.....
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 5999999999999999999999999998 79997653 46778999999999999999999999987643
No 6
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.55 E-value=3.8e-15 Score=128.12 Aligned_cols=69 Identities=20% Similarity=0.344 Sum_probs=61.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
..|||+||||+++|+.++||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|..||..+.++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP-GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT-THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 46999999999999999999999999998 79997654 35678999999999999999999999876543
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=7.1e-15 Score=126.73 Aligned_cols=69 Identities=22% Similarity=0.364 Sum_probs=61.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
..|||+||||+++|+.++||+|||+++++ |||++..+ ...++|+.|++||++|+||.+|..||..+.++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46999999999999999999999999998 79997654 45789999999999999999999999987543
No 8
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.8e-15 Score=139.63 Aligned_cols=70 Identities=24% Similarity=0.274 Sum_probs=63.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
..|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||..+.++
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 47999999999999999999999999998 79998755567889999999999999999999999987543
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=8e-15 Score=129.53 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=62.0
Q ss_pred ccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 88 ~iplDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
....|||+||||+++|+.++||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|..||.....
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP-GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST-THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3467999999999999999999999999987 79997653 4567999999999999999999999987643
No 10
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.51 E-value=5.7e-15 Score=134.09 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=63.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.++++|+.|++||++|+||.+|+.||....+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 35899999999999999999999999998 79998755567789999999999999999999999987654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1e-14 Score=128.86 Aligned_cols=67 Identities=25% Similarity=0.342 Sum_probs=60.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
..|||+||||+++|+.+|||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|..||..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP-DAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH-HHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-HHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 35899999999999999999999999987 79997654 567899999999999999999999998753
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.1e-14 Score=129.39 Aligned_cols=69 Identities=19% Similarity=0.379 Sum_probs=61.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~-~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
.|||+||||+++|+.++||+|||+++++ |||++... +.++++|+.|++||++|+||.+|..||....+.
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 5899999999999999999999999987 79997643 467889999999999999999999999976543
No 13
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.50 E-value=1.3e-14 Score=131.47 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=61.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~-~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
.|||+||||+++|+.+|||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|..||..+.++
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999999987 79997653 457789999999999999999999999987654
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.50 E-value=1.7e-14 Score=132.58 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=61.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcc
Q 003752 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (798)
Q Consensus 90 plDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l 156 (798)
..|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||...
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g 83 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYG 83 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhc
Confidence 46999999999999999999999999987 79998765667889999999999999999999999864
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.9e-14 Score=128.29 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=60.5
Q ss_pred ccccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 86 ~m~iplDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
.|....|||+||||+++|+.++||+|||+++++ |||++.... ++|+.|++||++|+||.+|..||....
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 355678999999999999999999999999987 899975442 489999999999999999999998653
No 16
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.46 E-value=4.2e-13 Score=132.92 Aligned_cols=68 Identities=18% Similarity=0.335 Sum_probs=59.9
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 90 PIDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 90 plDyY~ILGV~~~As--~eeIKkAYRkla~~-~PDk~~s~~-----a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
+.|||+||||+++++ .++||+|||+++++ |||+..+.. .+..+|+.|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 569999999999998 99999999999998 899865432 256899999999999999999999999875
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.46 E-value=3.5e-14 Score=129.98 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=63.8
Q ss_pred cccCCCcccccCCCCCC-CHHHHHHHHHHHHhC-CCCCCCC---hHHHHHHHHHHHHHHHhccChhchHHHhhcccC
Q 003752 87 VSIPIDFYQALGAETHF-LGDGIRRAYEARISK-PPQYGFS---PDALISRRQILQAACETLANASSRREYNQGLAD 158 (798)
Q Consensus 87 m~iplDyY~ILGV~~~A-s~eeIKkAYRkla~~-~PDk~~s---~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~ 158 (798)
+.-..|||+||||+++| +.++||+|||+++++ |||++.+ .+.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34467999999999999 999999999999987 7998765 455788999999999999999999999998753
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.40 E-value=1.4e-13 Score=136.92 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=62.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
.|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 4899999999999999999999999998 89998655567789999999999999999999999976544
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.38 E-value=1.3e-13 Score=133.49 Aligned_cols=67 Identities=21% Similarity=0.338 Sum_probs=59.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh------HHHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP------DALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~------~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
.|||+||||+++|+.++||+|||+++++ |||+..+. +.+.++|+.|++||++|+||.+|+.||..+.
T Consensus 10 ~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 5899999999999999999999999988 79986543 2356899999999999999999999998764
No 20
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.37 E-value=2.9e-12 Score=126.61 Aligned_cols=67 Identities=18% Similarity=0.290 Sum_probs=59.2
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 91 IDFYQALGAETHF--LGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 91 lDyY~ILGV~~~A--s~eeIKkAYRkla~~-~PDk~~s~~-----a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
.|||+||||++++ +.++||++||+++++ |||+..+.. .+..+|+.|++||+||+||.+|..||..+.
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3899999999999 999999999999987 799865422 355789999999999999999999999875
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=5.6e-13 Score=118.49 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=55.0
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHH
Q 003752 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRRE 151 (798)
Q Consensus 89 iplDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~ 151 (798)
-..|||+||||+++|+.+|||+|||+++++ |||++... ...++|+.|++||++|+||.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP-GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT-THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCcccccC
Confidence 357999999999999999999999999998 89998654 356789999999999999998864
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.27 E-value=3e-13 Score=125.76 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=55.9
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhc
Q 003752 91 IDFYQALGAETHFLG--DGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQG 155 (798)
Q Consensus 91 lDyY~ILGV~~~As~--eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~ 155 (798)
.+||+||||+++|+. ++||+|||+++++ |||++.+ .++|+.|++||+||+||.+|+.||..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~ 71 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF 71 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence 589999999999999 9999999999998 7999765 35899999999999999999999964
No 23
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=125.48 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=58.2
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCCh-----HHHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSP-----DALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 91 lDyY~ILGV~~~--As~eeIKkAYRkla~~-~PDk~~s~-----~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
.|||+||||+++ ++.++||+|||+++++ |||+..+. ..+.++|+.|++||+||+||.+|+.||..+.
T Consensus 43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 599999999997 6899999999999998 89986532 1256789999999999999999999998664
No 24
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.26 E-value=5.2e-13 Score=144.28 Aligned_cols=65 Identities=26% Similarity=0.291 Sum_probs=0.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcc
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l 156 (798)
.|||+||||+++|+.+|||+|||+++++ |||++... .++++|+.|++||++|+||.+|+.||+..
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 6999999999999999999999999998 79987544 56789999999999999999999999863
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.23 E-value=9.5e-13 Score=130.62 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=54.4
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcc
Q 003752 91 IDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (798)
Q Consensus 91 lDyY~ILGV~~~As--~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l 156 (798)
.|||+||||+++|+ .+|||+|||+++++ |||++.++ ++|+.|++||++|+||.+|+.||+..
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G 75 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFG 75 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccC
Confidence 58999999999999 69999999999998 79997653 57999999999999999999999976
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.22 E-value=2.5e-12 Score=111.89 Aligned_cols=59 Identities=17% Similarity=0.054 Sum_probs=52.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHh
Q 003752 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYN 153 (798)
Q Consensus 91 lDyY~ILGV~~~--As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD 153 (798)
.++|+||||+++ ++.++||+|||+++++ |||++.+ .++|+.|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 479999999999 9999999999999987 7999754 357999999999999999998754
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.20 E-value=2.3e-12 Score=128.66 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=55.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHhccChhchHHH
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLANASSRREY 152 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~---a~~~Rf~~L~eAYevLsDp~~R~~Y 152 (798)
.|||+||||+++|+.++||+|||+++++ |||++.... .++++|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 5899999999999999999999999987 799865332 3678999999999999999999887
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.18 E-value=3.5e-12 Score=113.43 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=53.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHhccChhch
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSR 149 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~-~a~~~Rf~~L~eAYevLsDp~~R 149 (798)
.++|+||||+++|+.+|||+|||+++++ |||++... +.++++|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4899999999999999999999999987 79997654 45788999999999999998777
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.16 E-value=8.2e-12 Score=124.57 Aligned_cols=65 Identities=18% Similarity=0.254 Sum_probs=57.7
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhccc
Q 003752 90 PIDFYQAL------GAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (798)
Q Consensus 90 plDyY~IL------GV~~-~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~ 157 (798)
+.|||+|| |+++ +|+.++||+|||+++++ |||++.+ +.++|+.|++||+||+||.+|..||..+.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 46999999 5765 99999999999999998 7999765 45689999999999999999999999873
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.3e-11 Score=105.18 Aligned_cols=55 Identities=15% Similarity=0.113 Sum_probs=49.1
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhch
Q 003752 91 IDFYQALGAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSR 149 (798)
Q Consensus 91 lDyY~ILGV~~-~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R 149 (798)
.++|+||||++ +++.++||+|||+++++ |||++.++ .+|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~----~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH----HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH----HHHHHHHHHHHHHhhhhhc
Confidence 48999999999 79999999999999987 89997554 3799999999999998766
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.11 E-value=1.1e-11 Score=111.37 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=48.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh---HHHHHHHHHHHHHHHhccC
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP---DALISRRQILQAACETLAN 145 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~---~a~~~Rf~~L~eAYevLsD 145 (798)
.+||++|||++.||.+|||+|||+++++ |||++.+. ..++.+|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999987 79986543 2478899999999999975
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.08 E-value=1.7e-11 Score=112.62 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=48.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCC----ChH---HHHHHHHHHHHHHHhccChh
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGF----SPD---ALISRRQILQAACETLANAS 147 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~----s~~---a~~~Rf~~L~eAYevLsDp~ 147 (798)
.|||+|||++. ||.++||+|||+++++ |||++. +.+ .++++|+.|++||++|+|+.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 58999999996 9999999999999998 899853 222 35789999999999999975
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.08 E-value=1.3e-11 Score=144.83 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=40.6
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccChhchHHHhhcccCC
Q 003752 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (798)
Q Consensus 89 iplDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsDp~~R~~YD~~l~~~ 159 (798)
...|||+||||+++|+.+|||+|||+++++ |||++...+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 346999999999999999999999999998 79998666667889999999999999999999999976543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.49 E-value=7.4e-08 Score=101.63 Aligned_cols=65 Identities=22% Similarity=0.314 Sum_probs=52.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh---HHHHHHHHHHHHHHHhccChhchHHHhhc
Q 003752 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP---DALISRRQILQAACETLANASSRREYNQG 155 (798)
Q Consensus 91 lDyY~ILGV~~~As~eeIKkAYRkla~~-~PDk~~s~---~a~~~Rf~~L~eAYevLsDp~~R~~YD~~ 155 (798)
.+||.+||+...++.++|+++|++++++ |||+..++ +.++.+|+.|.+||++|+||++|..||.+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 4899999999999999999999997664 79987665 35778999999999999999999999974
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.03 E-value=2.6e-06 Score=71.82 Aligned_cols=49 Identities=18% Similarity=0.057 Sum_probs=41.5
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHhccC
Q 003752 93 FYQALGAETH---FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLAN 145 (798)
Q Consensus 93 yY~ILGV~~~---As~eeIKkAYRkla~~-~PDk~~s~~a~~~Rf~~L~eAYevLsD 145 (798)
-|+||||+++ ++.++|+++||++... |||+|-|..- +..|++|+++|..
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl----~~ki~~Ake~l~~ 58 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYL----QSKVYRAAERLKW 58 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHH----HHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHH----HHHHHHHHHHHHH
Confidence 4889999999 9999999999999876 7999987653 3468899999853
No 36
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=90.97 E-value=0.36 Score=45.14 Aligned_cols=62 Identities=19% Similarity=0.228 Sum_probs=34.0
Q ss_pred EEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 734 IDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 734 IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
|.++.|.-+|+.|++++.+...-.+......+........-++.-+++|.+|+|||....+.
T Consensus 79 ~~n~~I~vdgD~A~~~~~~~a~~~~~~~~~~~~~~~~~~~G~Y~d~~~r~~g~Wri~~r~~~ 140 (159)
T 4gb5_A 79 ITGHVVTIDSDRATIHAHVRAEHWLPAEVAGDGPDRWLVVGFYDNEAVRTADGWRLSSVKLT 140 (159)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEECCHHHHTTSCCEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCceEEEcCCEEEEEEEEEEEEeeccccCCCCceEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 33333334688999988885432222111111111222222455568889999999987654
No 37
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.50 E-value=0.26 Score=57.09 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=38.3
Q ss_pred cCCCcccccCCCCCCCH--HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHh
Q 003752 89 IPIDFYQALGAETHFLG--DGIRRAYEARISKPPQYGFSPDALISRRQILQAACET 142 (798)
Q Consensus 89 iplDyY~ILGV~~~As~--eeIKkAYRkla~~~PDk~~s~~a~~~Rf~~L~eAYev 142 (798)
...|||.|||++.+... .+|++|||+++.+.|+. ..|+.++..|+.|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 34469999999776665 77999999999987665 3689999999876
No 38
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=86.18 E-value=1.2 Score=41.34 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=28.3
Q ss_pred cCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEe
Q 003752 740 SQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRIT 790 (798)
Q Consensus 740 ~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~ 790 (798)
+.|+|.|+|.++|+ |.||.. -+.+=.|+..+|.|||.
T Consensus 76 ~~d~~~A~V~v~v~-----~knG~t---------~~~~i~LiK~dG~WkV~ 112 (114)
T 3k7c_A 76 TINKDSAKIRVLVL-----FNNDNN---------QSSNVFLAKKDRKWLVL 112 (114)
T ss_dssp EECSSEEEEEEEEE-----ETTSCE---------EEEEEEEEESSSSEEEC
T ss_pred eccCCEEEEEEEEE-----ECCCCc---------cccceeeEEeCCeEEEE
Confidence 33999999999993 755432 23677899999999975
No 39
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=84.81 E-value=1.2 Score=41.83 Aligned_cols=58 Identities=21% Similarity=0.232 Sum_probs=35.5
Q ss_pred ceeeEEEEE-ecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEE-cCCceEEecc
Q 003752 730 LNLTIDSVT-LSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRITDG 792 (798)
Q Consensus 730 ~~L~IdsV~-~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r-~~g~WkI~~~ 792 (798)
..+.+..++ +...|+-|+|....+....+-++|.+.. ...++.+.++| .+|+|||...
T Consensus 72 ~~~~~~~~~~I~v~gd~A~v~~~~~~~~~~~~~G~~~~-----~~~r~T~V~~r~~~ggWkIvh~ 131 (145)
T 3soy_A 72 RTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQH-----TTGRESQVWAKIPNTGWRIVHV 131 (145)
T ss_dssp EEEEESSCCEEEEETTEEEEEEEEEEEEEETTTCCEEE-----EEEEEEEEEEEETTTEEEEEEE
T ss_pred cceEEeeeeEEEEcCCEEEEEEEEEEEEEEcCCCCeee-----eEEEEEEEEEEcCCCCEEEEEE
Confidence 344555555 4446788988777776765554443333 24455556666 4599999753
No 40
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=83.52 E-value=4.1 Score=40.52 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=58.2
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHcCceEEeecceeeEEEEEecC---CCceeEEEEEEEEEEee----ec-cCcCC
Q 003752 694 HSLGKLPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQ---EGRHAWVEATVKESARL----TD-TVHPE 765 (798)
Q Consensus 694 h~i~~L~eILtg~mL~~W~~~A~~l~~~~~y~~Y~l~~L~IdsV~~~~---~g~~A~VeA~V~E~a~L----y~-~g~~~ 765 (798)
-|++.|.+.++..|+..+....++.+.+|..-+-+ .|.|+.+++.. .++.+.|.++. .+++ ++ .|..-
T Consensus 76 gD~~~Lr~~~t~~~~~~~~~~i~~r~~~g~~~~~~--~v~i~~~el~~a~~~~~~~~itV~f--~~~~i~~~rd~~G~vv 151 (194)
T 2cw9_A 76 GELDILKDWCYEATYSQLAHPIQQAKALGLQFHSR--ILDIDNVDLAMGKMVEQGPVLIITF--QAQLVMVVRNPKGEVV 151 (194)
T ss_dssp TCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEECCE--EEEEEEEEEEEEEEETTEEEEEEEE--EEEEECEEECTTSCEE
T ss_pred CCHHHHHHhcCHHHHHHHHHHHHHHHHCCCccccE--EEEecccEEEEEEEeCCeeEEEEEE--EEEEEEEEECCCCCEe
Confidence 37889999999999999999999888888764433 33455555332 45556665555 4444 44 22211
Q ss_pred CCCCcccceEEEE--EEEEcCC------ceEEeccce
Q 003752 766 NCDEKISTYTTRY--ELSSTKS------GWRITDGSK 794 (798)
Q Consensus 766 ~~~Sy~~ty~vRY--~L~r~~g------~WkI~~~~V 794 (798)
. .+-..-..|.| .|.|.-+ .||+.+.+-
T Consensus 152 e-G~~~~~~~v~e~W~f~R~~~~~~p~~~W~L~~iq~ 187 (194)
T 2cw9_A 152 E-GDPDKVLRMLYVWALCRDQDELNPYAAWRLLDISA 187 (194)
T ss_dssp E-ECTTCCEEEEEEEEEEECTTCSCGGGCEEEEEEEE
T ss_pred c-CCCCCceEEEEEEEEEEeCCCCCCCCCEEEEEEcc
Confidence 1 01122335666 4555433 399987654
No 41
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=83.45 E-value=3.7 Score=38.29 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=32.2
Q ss_pred EEEEEec-CCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 734 IDSVTLS-QEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 734 IdsV~~~-~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
|.++.+. .+|+.|++.+.+.- +...+.... .....++.+.++|.+|+|||..-.+.
T Consensus 94 ~~~~~I~~~~gd~A~~~~~~~~---~~~~~~g~~---~~~~g~y~d~~~r~dg~WrI~~r~~~ 150 (163)
T 3b8l_A 94 LTNFAVTGYEGDTASMRAYVIG---MGVGKDGRA---VTVNGRYFFEVRRTEKGWKATRYTMD 150 (163)
T ss_dssp EEEEEEEEECSSEEEEEEEEEE---EEEETTSCE---EEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCEEEEEeCCCEEEEEEEEEE---EEEcCCCCe---EEEEEEEEEEEEEeCCEEEEEEEEEE
Confidence 3344443 36788988777642 221111111 12234566778888999999976653
No 42
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=81.63 E-value=4 Score=39.02 Aligned_cols=21 Identities=10% Similarity=0.226 Sum_probs=16.5
Q ss_pred EEEEEEEEcCCceEEecccee
Q 003752 775 TTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 775 ~vRY~L~r~~g~WkI~~~~Vi 795 (798)
++.+.++|.+|+|||..-.++
T Consensus 132 ry~d~l~r~dg~WrI~~r~~~ 152 (176)
T 3a76_A 132 VFTDEYERRDGVWKFSKRNAC 152 (176)
T ss_dssp EEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEECCEEEEEEEEEE
Confidence 456668889999999987654
No 43
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=80.47 E-value=1.4 Score=44.54 Aligned_cols=54 Identities=13% Similarity=0.274 Sum_probs=36.6
Q ss_pred EeecceeeEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccce
Q 003752 726 DYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 794 (798)
Q Consensus 726 ~Y~l~~L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~V 794 (798)
.|.=++++|.......+++.+.|..+| .++| ..+.|.|.|.+.+|+|||.|..|
T Consensus 115 ~y~~q~i~v~~~~~~~~~~~~~V~t~i------~~~g---------~~i~v~y~l~~~~g~WkvyDv~i 168 (211)
T 2qgu_A 115 NVRNQTVAYKPFRAAADDTDVVVRSTV------NNNG---------EPVALDYRVEKSPNGWKVYDINI 168 (211)
T ss_dssp TCSSCEEEECCCCSCTTCSEEEEEEEE------EETT---------EEEEEEEEEEEETTEEEEEEEEE
T ss_pred hhCCCeEEEeccccCCCCCeEEEEEEE------EeCC---------CeEEEEEEEEEcCCceEEEEEEE
Confidence 355455666666544466778886665 2222 34569999988899999998865
No 44
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=78.98 E-value=3.8 Score=37.69 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=23.0
Q ss_pred CCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEE-EEcCCceEEec
Q 003752 741 QEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYEL-SSTKSGWRITD 791 (798)
Q Consensus 741 ~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L-~r~~g~WkI~~ 791 (798)
.+|+.|.|..+..-. ....|. ......+..+.+ ++.+|+|||..
T Consensus 100 v~gd~A~~~~~~~~~--~~~~G~-----~~~~~~r~T~v~~~k~~g~WkIvh 144 (148)
T 3bb9_A 100 ITGDIAISTSISHAQ--GEYKGK-----SIDSMTMETLVLIKQADGRWKITH 144 (148)
T ss_dssp EETTEEEEEEEEEEE--ECCC-------CEEEEEEEEEEEEECTTSCEEEEE
T ss_pred EcCCEEEEEEEEEEe--eeeCCc-----ccccceEEEEEEeEEcCCcEEEEE
Confidence 346778775444321 211222 122344455556 66789999975
No 45
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=78.29 E-value=6.7 Score=37.38 Aligned_cols=58 Identities=9% Similarity=0.000 Sum_probs=32.8
Q ss_pred eEEEEEecC-C-CceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 733 TIDSVTLSQ-E-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 733 ~IdsV~~~~-~-g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
-|.++.|.. + ++.|+|++.+. ..-...+.+.. ..+ .-++.+.|+|.+|+|||..-.|+
T Consensus 98 ~i~n~~I~~~~~~d~a~~~s~~~--~~~~~~~~~~~-~~~--~G~y~D~l~r~~g~Wri~~R~v~ 157 (172)
T 2b1x_B 98 FVTNVRVATGDSEDEFKVTSNLL--LYRTRGDVATY-DVL--SGERTDVLRRAGDSFLMAKRVVL 157 (172)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEE--EEEECTTCSCC-EEE--EEEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCEEEEEecCCCEEEEEEEEE--EEEEcCCCCce-EEE--EEEEEEEEEEcCCEEEEEEEEEE
Confidence 355555444 3 37888776651 11112221111 122 44678889999999999986653
No 46
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=77.96 E-value=5.7 Score=36.38 Aligned_cols=55 Identities=5% Similarity=0.064 Sum_probs=31.4
Q ss_pred eEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 733 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 733 ~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
.|.++.|..+|+.|+++..+. ++.... . .....-++.+.++|.+|+|||..-.++
T Consensus 72 ~i~n~~i~~~~d~a~~~~~~~----~~~~~~--~--~~~~~g~y~d~~~r~dg~Wri~~r~~~ 126 (144)
T 2rgq_A 72 CSSNAIIQGNYDEATMESYLT----VVNRED--L--NRAGSAFVKDQVRKINGKWYLILRQIE 126 (144)
T ss_dssp EEEEEEEEECSSEEEEEEEEE----EEESSS--S--CEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCeEEEEeCCEEEEEEEEE----EEEecC--C--eEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 355555545566777665442 232211 1 111222456688899999999986653
No 47
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=76.82 E-value=8.3 Score=36.02 Aligned_cols=103 Identities=15% Similarity=0.212 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHH--------HHhcCCCCCC---CCcccccch--hhHHHHHHHHHHHHHcCceEEeecceeeEEEEEe
Q 003752 673 RLAEDIVRKWQNIK--------SQAFGPDHSL---GKLPEVLDG--QMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTL 739 (798)
Q Consensus 673 ~~Ae~lV~~Wq~aK--------a~AlGp~h~i---~~L~eILtg--~mL~~W~~~A~~l~~~~~y~~Y~l~~L~IdsV~~ 739 (798)
+.++++++.|..+= .+.+.++..+ .-.-..+.| ....-|...-. ++-+- .+++..+++
T Consensus 8 ~~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~----~~~~~-----~i~~~~v~v 78 (144)
T 3gwr_A 8 PTPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFG----AAGRF-----RLQVKAVHE 78 (144)
T ss_dssp SSHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHH----HHCCE-----EEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHc----CCCcE-----EEEEEEEEE
Confidence 44677777776642 2345565322 223345665 45556654432 22122 345555666
Q ss_pred cCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecc
Q 003752 740 SQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 740 ~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~ 792 (798)
..+|+-|.| +.+|....-.++ .. . ...++.+.++|++|+|||...
T Consensus 79 ~~~gd~A~v--~~~e~~~~~~~~--g~--~--~~~r~T~V~~r~~g~Wrivhh 123 (144)
T 3gwr_A 79 IRQADHVIR--IVDEFLTIGDET--AP--R--PAILATNVYRREADGWRMVLH 123 (144)
T ss_dssp EECSSEEEE--EEEEEEEETTCS--SC--C--CCEEEEEEEEECSSSEEEEEE
T ss_pred EecCCEEEE--EEEEEEEecCCC--Cc--e--eeEEEEEEEEEECCEEEEEEE
Confidence 667887876 334453332211 11 1 566788888889999999753
No 48
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=76.47 E-value=3 Score=38.19 Aligned_cols=47 Identities=17% Similarity=0.213 Sum_probs=26.4
Q ss_pred CCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccce
Q 003752 742 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 794 (798)
Q Consensus 742 ~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~V 794 (798)
+|+.|++.+.+. ...+..+. .. .+ ..-++.+.++|.+|+|||..-.+
T Consensus 93 ~gd~A~~~~~~~--~~~~~~~~-~~--~~-~~g~y~d~~~r~~g~Wri~~r~~ 139 (155)
T 2rfr_A 93 EGDTATARCHSV--VFRCVSGT-FG--SH-RVSANRWTFRRTPAGWRAVRREN 139 (155)
T ss_dssp ETTEEEEEEEEE--EEEEETTE-EE--EE-EEEEEEEEEEEETTEEEEEEEEE
T ss_pred eCCEEEEEEEEE--EEEEcCCC-ce--EE-EeeeeEEEEEECCCEEEEEEEEE
Confidence 467888876552 22222211 10 11 11234568899999999998544
No 49
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=76.18 E-value=4.1 Score=38.82 Aligned_cols=22 Identities=9% Similarity=-0.041 Sum_probs=18.1
Q ss_pred eEEEEEEEEcCCceEEecccee
Q 003752 774 YTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 774 y~vRY~L~r~~g~WkI~~~~Vi 795 (798)
-++++.|+|.+|+|||..=.|+
T Consensus 128 G~y~D~l~r~~~gwri~~R~v~ 149 (163)
T 3eby_A 128 GKYVDRFDLSGGTVRLKSRTCI 149 (163)
T ss_dssp EEEEEEEECCTTCCEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEEE
Confidence 3678999999999999976654
No 50
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=74.79 E-value=5.1 Score=37.53 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=28.0
Q ss_pred CCceeEEEEEEEEEEeee-ccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 742 EGRHAWVEATVKESARLT-DTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 742 ~g~~A~VeA~V~E~a~Ly-~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
+|+.|++.+.+. .... .+|. .....-++.+.++|.+|+|||..-.+.
T Consensus 83 ~gd~A~~~~~~~--~~~~~~~g~-----~~~~~g~y~d~~~r~dg~Wri~~r~~~ 130 (170)
T 2chc_A 83 DGDVATGRSASV--VTLATAAGY-----KILGSGEYQDRLIKQDGQWRIAYRRLR 130 (170)
T ss_dssp ETTEEEEEEEEE--EEEEETTEE-----EEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred eCCEEEEEEEEE--EEEEcCCCC-----EEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 467888877762 1122 1111 111233566678888999999987654
No 51
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=74.71 E-value=6.2 Score=35.87 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHH----HHhcCCCCCCCCcccccchhhHHHHHHHHHHHHHcCceEEeecceeeEEEEEecCCCceeEEE
Q 003752 674 LAEDIVRKWQNIK----SQAFGPDHSLGKLPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQEGRHAWVE 749 (798)
Q Consensus 674 ~Ae~lV~~Wq~aK----a~AlGp~h~i~~L~eILtg~mL~~W~~~A~~l~~~~~y~~Y~l~~L~IdsV~~~~~g~~A~Ve 749 (798)
+-++++.+|..+= .++|..-|.-+..-....|..+.-+....++.+.--.++.=. ..+++..+.+..+|+.|.+.
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~-~~~~~~~~~v~~~gd~A~~~ 82 (142)
T 2gxf_A 4 QLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHH-IVPTQGKMILLEAGDTVLVL 82 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSS-CCCEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCC-ceEEEEEEEEEEcCCEEEEE
Confidence 3556777776653 345555554432211111322222222223333221211101 12344555555567888774
Q ss_pred EEEEEEEeeeccCcCCCCCCcccceEEEEEEEE-cCCceEEe
Q 003752 750 ATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRIT 790 (798)
Q Consensus 750 A~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r-~~g~WkI~ 790 (798)
+..+ .....+|. ......++.+.++| .+|+|||.
T Consensus 83 ~~~~--~~~~~~G~-----~~~~~g~~t~v~~r~~dG~Wri~ 117 (142)
T 2gxf_A 83 SQTL--LDSDKKDS-----EYAMERRATYVFKKNAQGEWLCV 117 (142)
T ss_dssp EEEE--CCC--------------EEEEEEEEEECTTSCEEEE
T ss_pred EEEE--EEECCCCC-----eEeeeEEEEEEEEECCCCCEEEE
Confidence 4432 11111111 12233445667777 47899985
No 52
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=74.26 E-value=24 Score=29.45 Aligned_cols=77 Identities=8% Similarity=0.071 Sum_probs=53.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++.+.|+++++++.-+.+++-... ..++... +|.-....+ +++.|.+.+++|+++-...+ -...
T Consensus 16 ~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~-------lg~~~~~~g--~~~~A~~~~~~al~l~~~~~----~~~~ 79 (100)
T 3ma5_A 16 EHLKHDNASRALALFEELVETDPD---YVGTYYH-------LGKLYERLD--RTDDAIDTYAQGIEVAREEG----TQKD 79 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT---CTHHHHH-------HHHHHHHTT--CHHHHHHHHHHHHHHHHHHS----CHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHH-------HHHHHHHcC--CHHHHHHHHHHHHhhhhcCC----chhH
Confidence 567899999999999999964321 2233333 333333343 59999999999999988876 4667
Q ss_pred HHHHHHHhHhhCh
Q 003752 259 QAQIDETLEEINP 271 (798)
Q Consensus 259 q~eI~~~L~~L~P 271 (798)
..++...|.++-+
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 7777777765543
No 53
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=72.77 E-value=7.9 Score=34.95 Aligned_cols=19 Identities=5% Similarity=0.219 Sum_probs=13.1
Q ss_pred ceEEEEEEEEcCCceEEec
Q 003752 773 TYTTRYELSSTKSGWRITD 791 (798)
Q Consensus 773 ty~vRY~L~r~~g~WkI~~ 791 (798)
.++..+.++|.+|+|||..
T Consensus 104 ~~r~T~v~~r~~g~W~ivh 122 (142)
T 3f7s_A 104 FMRATVGYRRQGGQWQVIH 122 (142)
T ss_dssp EEEEEEEEEEETTEEEEEE
T ss_pred eeEEEEEEEEeCCEEEEEE
Confidence 3344444777889999975
No 54
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=72.61 E-value=17 Score=33.02 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=58.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++.+.|++++++++-++.+.-...... ....+.++..++.-.+..+ +++.|...+++|+++.++.| -+..
T Consensus 116 ~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 185 (203)
T 3gw4_A 116 VALHFGDLAGARQEYEKSLVYAQQADD----QVAIACAFRGLGDLAQQEK--NLLEAQQHWLRARDIFAELE----DSEA 185 (203)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHcC----CHHH
Confidence 566789999988888888753211111 1223444555666666665 59999999999999999987 5777
Q ss_pred HHHHHHHhHhhChh
Q 003752 259 QAQIDETLEEINPR 272 (798)
Q Consensus 259 q~eI~~~L~~L~P~ 272 (798)
..++...+.++.|.
T Consensus 186 ~~~~~~~~~~~~~~ 199 (203)
T 3gw4_A 186 VNELMTRLNGLEHH 199 (203)
T ss_dssp HHHHHHHHHTTCC-
T ss_pred HHHHHhcccchhhc
Confidence 78888887777553
No 55
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=72.03 E-value=6 Score=35.89 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCceEEeecceeeEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCce
Q 003752 708 LKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGW 787 (798)
Q Consensus 708 L~~W~~~A~~l~~~~~y~~Y~l~~L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~W 787 (798)
+..|.+ +. ..-...... ++.+|.+|++. |+.|+|++.+. +. + ..|+=.+.|++.+|+|
T Consensus 53 ~~~~~~-v~-~~p~~~~~~---~~~~i~~I~i~--gd~A~a~v~~~-----~~-----~-----~~f~D~~~L~k~dg~W 110 (120)
T 3fka_A 53 RDAFIA-MC-EDAADAETD---PFWAISSVSVQ--GDIAMLHVEND-----WA-----G-----MRFDDFLTVLLHEGSW 110 (120)
T ss_dssp HHHHHH-HH-HHHCCSSCC---CCEEEEEEEEE--TTEEEEEEEEE-----ET-----T-----EEEEEEEEEEEETTEE
T ss_pred HHHHHh-hc-CCccCCCCC---ceEEEEEEEEE--CCEEEEEEEEE-----cC-----C-----CceEEEEEEEEeCCEE
Confidence 477877 65 111111111 23366777764 57888877741 21 1 2345567899999999
Q ss_pred EEec
Q 003752 788 RITD 791 (798)
Q Consensus 788 kI~~ 791 (798)
||.+
T Consensus 111 kIv~ 114 (120)
T 3fka_A 111 RIVS 114 (120)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 56
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=71.90 E-value=70 Score=30.43 Aligned_cols=196 Identities=11% Similarity=0.038 Sum_probs=104.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
.+.+.|+++.+++.=+.+++.....+...+..+-+|.++.. .+ +|..|...++++++ ........+..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-------~~--~~~~A~~~~~~~l~---~~P~~~~~~~a 80 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-------NA--DLPLAQAAIDRFIR---LNPTHPNIDYV 80 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------TT--CHHHHHHHHHHHHH---HCTTCTTHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-------cC--CHHHHHHHHHHHHH---HCcCCCcHHHH
Confidence 56788999999999999987554455556666666655533 32 58888888777765 34333333444
Q ss_pred HHHHHHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhCCCCCCccCCCCChHHHHHHHHhhccHHHHHHhh
Q 003752 259 QAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKLF 338 (798)
Q Consensus 259 q~eI~~~L~~L~P~~iLELLalPl~~e~~~~Rq~Gl~lLr~lL~~rg~~g~~~~~~gl~~~dFl~q~~~~LTa~EQv~LF 338 (798)
.-.+-..+.++.+..+-.++.+........+-.+++..++.++..-... ... .+ +...|..... .+
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~-------~~a-~~----a~~~l~~~~~-~~- 146 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS-------QYT-TD----ATKRLVFLKD-RL- 146 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTC-------TTH-HH----HHHHHHHHHH-HH-
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC-------hhH-HH----HHHHHHHHHH-HH-
Confidence 4444455555444444344443332222346788899999988632111 111 11 1111110000 00
Q ss_pred hcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhh
Q 003752 339 SATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV 418 (798)
Q Consensus 339 ~~~~~~~~~~~~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLL 418 (798)
...-|..+..++..| -..+|...++++.... |......+...-.+.|..-+
T Consensus 147 ----------~~~~~~~a~~~~~~~-------~~~~A~~~~~~~l~~~------------p~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 147 ----------AKYEYSVAEYYTERG-------AWVAVVNRVEGMLRDY------------PDTQATRDALPLMENAYRQM 197 (225)
T ss_dssp ----------HHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHS------------TTSHHHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHHHcC-------cHHHHHHHHHHHHHHC------------cCCCccHHHHHHHHHHHHHc
Confidence 000122233333333 3467777777776432 11122347888999999999
Q ss_pred CChhHHHHHhc
Q 003752 419 GKLDECRLWLG 429 (798)
Q Consensus 419 Gq~~eA~~~l~ 429 (798)
|+.++|...+.
T Consensus 198 g~~~~A~~~~~ 208 (225)
T 2yhc_A 198 QMNAQAEKVAK 208 (225)
T ss_dssp TCHHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 99999999875
No 57
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=71.39 E-value=8.5 Score=35.89 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=27.2
Q ss_pred CCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccce
Q 003752 742 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 794 (798)
Q Consensus 742 ~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~V 794 (798)
+++.|.|.+..+=......+|...+ ....+..|.|+|.+|+|||...++
T Consensus 79 ~~D~A~v~~~~~l~g~~~~~G~~~~----~~~~~~t~v~vr~dg~WrI~a~h~ 127 (146)
T 3gzr_A 79 APGSALAVVTLIQDAYVTPDGRQMP----RAHDRLTLLAVEREGVWRFIHGHN 127 (146)
T ss_dssp ETTEEEEEEEEEECCEECTTCCEEC----CEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEEEecceeCCCCCcCC----ccCcEEEEEEEEECCEEEEEEEec
Confidence 5777877654321211112222110 112245678899999999987765
No 58
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=71.01 E-value=5.7 Score=36.33 Aligned_cols=44 Identities=14% Similarity=0.270 Sum_probs=29.3
Q ss_pred eEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecc
Q 003752 733 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 733 ~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~ 792 (798)
+|.++++. |+.|++++..+ .|. . ..|+=.++|++.+|+|||.+-
T Consensus 76 ~I~~I~i~--gd~A~a~v~~~----~~~----~------~~f~D~l~L~k~dg~WkIv~K 119 (125)
T 3duk_A 76 RITNIDIV--GTVAHARVEAE----NWT----N------FKFSDLFLLLKLDGKWTIVNK 119 (125)
T ss_dssp EEEEEEEE--TTEEEEEEEEE----CSS----S------CCEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEE--CCEEEEEEEEE----EcC----C------CeEEEEEEEEEeCCEEEEEEE
Confidence 67777764 67888876542 231 1 122346789999999999863
No 59
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=70.75 E-value=15 Score=33.97 Aligned_cols=63 Identities=10% Similarity=0.002 Sum_probs=34.0
Q ss_pred EeecceeeEEEEEecCC-CceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 726 DYSLLNLTIDSVTLSQE-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 726 ~Y~l~~L~IdsV~~~~~-g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
....| .|.++.|..+ ++.|++++.+.-.. ...++.. .....-++...++|.+|+|||..-.+.
T Consensus 68 ~~~~H--~~~n~~I~~~gdd~A~~~~~~~~~~-~~~~~~~----~~~~~gry~d~~~r~dg~Wri~~r~~~ 131 (150)
T 3ef8_A 68 RGTSH--HNSNICIDFVSETEANVRSVVLAIH-RYTKERP----DGILYGQYFDTVVKVDGQWKFKRRELR 131 (150)
T ss_dssp EEEEE--EEEEEEEEEEETTEEEEEEEEEEEE-EESSSSC----CEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CceEE--ecCCEEEEEcCCCEEEEEEEEEEEE-EccCCCC----eEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 33445 3444444332 36888877763221 1112211 111233566678899999999987664
No 60
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=70.39 E-value=12 Score=32.50 Aligned_cols=42 Identities=12% Similarity=0.287 Sum_probs=23.0
Q ss_pred CCCceeEEEEEEEEEEeee-ccCcCCCCCCcccceEEEE--EEEEc-CCceEEec
Q 003752 741 QEGRHAWVEATVKESARLT-DTVHPENCDEKISTYTTRY--ELSST-KSGWRITD 791 (798)
Q Consensus 741 ~~g~~A~VeA~V~E~a~Ly-~~g~~~~~~Sy~~ty~vRY--~L~r~-~g~WkI~~ 791 (798)
.+|+.|++....+=. .. .+|. . -++..+| .++|+ +|+|||..
T Consensus 75 ~~gd~A~~~~~~~~~--~~~~~G~--~-----~~~~g~~~~v~~r~~dG~W~i~~ 120 (129)
T 3hx8_A 75 ESGDFAFESGSFSLK--APGKDSK--L-----VDAAGKYVVVWRKGQDGGWKLYR 120 (129)
T ss_dssp EETTEEEEEEEEEEE--EECTTSC--E-----EEEEEEEEEEEEECTTSCEEEEE
T ss_pred cCCCEEEEEEEEEEE--eeCCCCC--e-----eeeeEEEEEEEEECCCCcEEEEE
Confidence 467888887655322 22 1121 1 1223444 45667 89999863
No 61
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=70.38 E-value=12 Score=32.89 Aligned_cols=55 Identities=15% Similarity=0.254 Sum_probs=28.4
Q ss_pred eeEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEc-CCceEEecc
Q 003752 732 LTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSST-KSGWRITDG 792 (798)
Q Consensus 732 L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~-~g~WkI~~~ 792 (798)
++|..|.+. +|+.|.+..... .+....+... .....++..+.++++ +|+|||..-
T Consensus 73 ~~~~~i~~~-~gd~a~~~~~~~--~~~~~~~~g~---~~~~~~~~~~v~~~~~dG~W~i~~~ 128 (135)
T 3d9r_A 73 YEIKEVVQT-SADWAFVRSATE--GTETNKATGV---VTPAAYQELFLLRKSATGSWQTARY 128 (135)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEE--EEEEETTTCC---EEEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEEEe-cCCEEEEEEEEE--EEEecCCCCC---ceeecccEEEEEEecCCCcEEEEEE
Confidence 345555542 567787755442 2222111111 112234455566777 899999754
No 62
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=70.18 E-value=7.6 Score=35.03 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=28.0
Q ss_pred EEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecc
Q 003752 734 IDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 734 IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~ 792 (798)
|.+|++. |+.|++++... .+. . ..|.=.++|+|.+|+|||..-
T Consensus 78 i~~i~i~--gd~A~a~~~~~----~~~-----~-----~~~~d~~~l~k~dg~WkI~~~ 120 (128)
T 3blz_A 78 IARIDIV--GTAASARIDTD----DIS-----G-----FRFTDFFNLLKVEGKWTVVSK 120 (128)
T ss_dssp EEEEEEE--TTEEEEEEEEE----EET-----T-----EEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEE--CCEEEEEEEEE----EcC-----C-----CceEEeEEEEEECCEEEEEEE
Confidence 5666654 57888877763 121 1 123345589999999999754
No 63
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=70.00 E-value=20 Score=34.74 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=15.6
Q ss_pred EEEEEEEcCCceEEecccee
Q 003752 776 TRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 776 vRY~L~r~~g~WkI~~~~Vi 795 (798)
+.-+++|.+|+|||+...+.
T Consensus 152 Y~D~~~R~dg~Wri~~r~~~ 171 (179)
T 3ejv_A 152 YRLTLRTVADGWVISAMRIE 171 (179)
T ss_dssp EEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEECCeEEEEEEEEE
Confidence 55566788999999987663
No 64
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=67.42 E-value=25 Score=35.96 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=64.2
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHcCceEEeecceeeEEEEEecC---C--CceeEEEEEE-EEEEeeecc---CcC
Q 003752 694 HSLGKLPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQ---E--GRHAWVEATV-KESARLTDT---VHP 764 (798)
Q Consensus 694 h~i~~L~eILtg~mL~~W~~~A~~l~~~~~y~~Y~l~~L~IdsV~~~~---~--g~~A~VeA~V-~E~a~Ly~~---g~~ 764 (798)
-|++.|...|++.+++.+...+++.+++|...+-. -|.|+.|++.. . ++.+.|.++. .+....+.+ |..
T Consensus 99 GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d~~--il~I~~vdI~~a~~~~~~~~p~itV~f~aq~i~~~rd~k~GeV 176 (222)
T 3qk9_A 99 GDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGR--ILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEI 176 (222)
T ss_dssp TCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEECCE--EEEEEEEEEEEEEECSSSCCEEEEEEEEEEEECCEEESTTCCC
T ss_pred CCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEeeee--EeeecceEEEEEEEecCCCceEEEEEEEEEEEEEEEeCCCCcc
Confidence 47889999999999999999999999999865555 56788888543 2 5677776664 344444433 332
Q ss_pred CCCCCcccceEEEEEEEE--cC--------CceEEeccc
Q 003752 765 ENCDEKISTYTTRYELSS--TK--------SGWRITDGS 793 (798)
Q Consensus 765 ~~~~Sy~~ty~vRY~L~r--~~--------g~WkI~~~~ 793 (798)
-. .+-+.-.++.|.... .- ..||+.+.+
T Consensus 177 Ve-Gd~d~i~~~~~~WtF~R~~~~~d~~~tp~WkL~eiq 214 (222)
T 3qk9_A 177 AA-GDEANILMSSYAMVFTRDPEQIDDDETEGWKILEFV 214 (222)
T ss_dssp SS-SCTTCCEEEEEEEEEEECCC--------CEEEEEEE
T ss_pred cc-CCCCCceEEEEEEEEEEcCccCCCCCCCCcEEehhh
Confidence 22 122334466666555 31 379998765
No 65
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=65.08 E-value=18 Score=33.22 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=26.7
Q ss_pred CCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccce
Q 003752 742 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 794 (798)
Q Consensus 742 ~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~V 794 (798)
+++.|.|. .+ ..++..|..+. .-....+..|.++|.+|+|||...++
T Consensus 91 ~~d~A~v~---~~-~~~~~~g~~~~--~~~~~~~~T~v~~r~~g~WrI~~~h~ 137 (143)
T 4i4k_A 91 GDGIALLI---TE-GGILAPGETEA--SGDGAVRASWLAVEQDGQWRLAAYQN 137 (143)
T ss_dssp ETTEEEEE---EE-EEEECTTCSSC--CGGGEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEE---ec-cceecCCCCCC--CcccceEEEEEEEEECCcEEEEEecC
Confidence 57778774 22 22343333221 01123345677889999999987654
No 66
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=64.98 E-value=12 Score=35.95 Aligned_cols=56 Identities=9% Similarity=0.086 Sum_probs=31.3
Q ss_pred EEEEEecC-CCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEecccee
Q 003752 734 IDSVTLSQ-EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 734 IdsV~~~~-~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
|.+|.|.. +|+.|+|++.+ . +|..........+. -++.+.|+|.+|+|||..-.|+
T Consensus 103 isN~~i~~~~~~~a~v~s~~--~--~~~~~~~~~~~~~~--G~y~D~l~r~~~~wri~~R~v~ 159 (174)
T 2gbw_B 103 VSNVEAFEAGNGELDVLSNI--L--VYRNRRQTEVTVHT--LGREDKLRRDGNGFKVFRRKLI 159 (174)
T ss_dssp EEEEEEEEEETTEEEEEEEE--E--EEEEETTTEEEEEE--EEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCEEEEEcCCCEEEEEEEE--E--EEEEcCCCceEEEE--EEEEEEEEEcCCEEEEEEEEEE
Confidence 44555433 56677776544 1 22111001111232 4678889999999999986653
No 67
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=64.33 E-value=19 Score=35.47 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=41.7
Q ss_pred HHHHHHHHHHcCce-----EEeecceeeEEEEEecC--CCceeEEEEEEEEEEeeecc-CcCCCCCCcccceEEEEEEEE
Q 003752 711 WTDRASEIAQLGWT-----YDYSLLNLTIDSVTLSQ--EGRHAWVEATVKESARLTDT-VHPENCDEKISTYTTRYELSS 782 (798)
Q Consensus 711 W~~~A~~l~~~~~y-----~~Y~l~~L~IdsV~~~~--~g~~A~VeA~V~E~a~Ly~~-g~~~~~~Sy~~ty~vRY~L~r 782 (798)
-.+|+..++....| -++. | -|.+|.+.. +++.+.|.+.+ . +|.. ..... ..|. -+++|.|++
T Consensus 87 L~~RV~rl~t~~~~a~~P~~Rtr-H--~vsNv~v~~~~~~~~~~vrs~~--~--v~~~r~~~~~-~~~~--G~y~D~L~r 156 (186)
T 3gzx_B 87 MYGRIRQKTSDLNWAEDPPSRTR-H--LVSNVIVREMDTPGTLEVASAF--L--LYRSRLERQV-DVFA--GERRDVLRI 156 (186)
T ss_dssp HHHHHHHHTTTCCGGGSSCCEEE-E--EEEEEEEEECSSTTEEEEEEEE--E--EEEEETTTEE-EEEE--EEEEEEEEE
T ss_pred HHHHHHHHhcccccccCCCceEE-E--EEcCEEEEEecCCCEEEEEEEE--E--EEEEcCCCcE-EEEE--EEEEEEEEE
Confidence 35677776543222 1333 5 455666543 46777776655 2 2221 11111 1222 468999999
Q ss_pred -cCC-ceEEecccee
Q 003752 783 -TKS-GWRITDGSKI 795 (798)
Q Consensus 783 -~~g-~WkI~~~~Vi 795 (798)
.+| +|||..=.|+
T Consensus 157 ~~~g~~wrI~~R~V~ 171 (186)
T 3gzx_B 157 ADNPLGFQIAKRTII 171 (186)
T ss_dssp CSSTTSEEEEEEEEE
T ss_pred cCCCceEEEEEEEEE
Confidence 788 9999976553
No 68
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=63.77 E-value=13 Score=35.04 Aligned_cols=21 Identities=19% Similarity=0.385 Sum_probs=15.7
Q ss_pred eEEEEEEEEcCCceEEeccce
Q 003752 774 YTTRYELSSTKSGWRITDGSK 794 (798)
Q Consensus 774 y~vRY~L~r~~g~WkI~~~~V 794 (798)
.+..+.++|.+|+|||.....
T Consensus 115 ~~~t~v~~r~dG~WrI~~~~~ 135 (172)
T 3cu3_A 115 SLPLYVVTKGDEGWQIEGLLN 135 (172)
T ss_dssp BCCEEEEEEETTEEEEEEEEC
T ss_pred eEEEEEEEEeCCeEEEEEEEc
Confidence 345667778899999987643
No 69
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=61.50 E-value=13 Score=35.83 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=18.3
Q ss_pred eEEEEEEEEcCCceEEecccee
Q 003752 774 YTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 774 y~vRY~L~r~~g~WkI~~~~Vi 795 (798)
-+.+|.|++.+|+|||..-.|+
T Consensus 128 G~~~d~L~r~~~~wri~~R~v~ 149 (164)
T 3e99_A 128 GMSRYAIDFSGDAPKIVSKYVV 149 (164)
T ss_dssp EEEEEEEECSSSSCEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEEE
Confidence 3688999999999999976653
No 70
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=61.16 E-value=24 Score=32.57 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=13.5
Q ss_pred CCCHHHHHHHHHHHHHH
Q 003752 669 RMDARLAEDIVRKWQNI 685 (798)
Q Consensus 669 ~lt~~~Ae~lV~~Wq~a 685 (798)
..+.++-++++.+|..+
T Consensus 16 ~~d~~~I~~~~~~~~~A 32 (156)
T 3h51_A 16 DGEAREVAALFDTWNAA 32 (156)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 46778888899998765
No 71
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=60.34 E-value=24 Score=31.75 Aligned_cols=20 Identities=5% Similarity=-0.029 Sum_probs=14.3
Q ss_pred ceEEEEEEEEcCCceEEecc
Q 003752 773 TYTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 773 ty~vRY~L~r~~g~WkI~~~ 792 (798)
.++..+.+++.+|+|||...
T Consensus 113 ~~r~T~v~~k~~g~Wkivh~ 132 (143)
T 2ux0_A 113 QSEETRVWHRRDGKWLNVHY 132 (143)
T ss_dssp EEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEEEECCEEEEEEE
Confidence 34555567778899999754
No 72
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus}
Probab=58.98 E-value=25 Score=33.27 Aligned_cols=50 Identities=8% Similarity=0.024 Sum_probs=33.4
Q ss_pred eEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEE--cCCceEEecc
Q 003752 733 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS--TKSGWRITDG 792 (798)
Q Consensus 733 ~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r--~~g~WkI~~~ 792 (798)
+|..+++..+ +.|.|-.++.|..++- |++-. +. .||+.+. .+|+|||.=|
T Consensus 66 ki~~le~~~d-t~A~v~~t~~~kfsYk--G~pne-----d~--~~YtrVwKK~d~~WKi~w~ 117 (131)
T 3hzp_A 66 KVHKFELLGS-NAAICVFTLGSKFTYK--GTQND-----DL--PTVTSIFKKIDEKWKVAWM 117 (131)
T ss_dssp EEEEEEESSS-SEEEEEEEEEEEEEET--TEEEE-----EB--CEEEEEEEEETTEEEEEEE
T ss_pred ceeeEEEcCC-ceEEEEEEecceEEEc--CccCC-----cc--eeeehhhhhcCCcEEEEEE
Confidence 5666665543 6798889998887766 44333 44 4566555 5799999744
No 73
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.12 E-value=79 Score=26.29 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=51.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++...|+++.+++.-+.+++-.. ...++... +|.-....+ ++..|...+++++++-...+ -...
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~-------la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 91 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDP---TYSVAWKW-------LGKTLQGQG--DRAGARQAWESGLAAAQSRG----DQQV 91 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHHH-------HHHHHHHHT--CHHHHHHHHHHHHHHHHHHT----CHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCC---CcHHHHHH-------HHHHHHHcC--CHHHHHHHHHHHHHhccccc----cHHH
Confidence 56788999999999888886421 12333333 333333443 59999999999999987765 4556
Q ss_pred HHHHHHHhHhhCh
Q 003752 259 QAQIDETLEEINP 271 (798)
Q Consensus 259 q~eI~~~L~~L~P 271 (798)
..+|...|.+|..
T Consensus 92 ~~~l~~~l~~l~~ 104 (115)
T 2kat_A 92 VKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 6677666666543
No 74
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=53.72 E-value=1.2e+02 Score=30.93 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=44.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
.+...|++++++++-+.+|+-.... . ...+-++..++.-.+..+ +|+.|...+++++++.++.+
T Consensus 57 ~~~~~g~~~~A~~~~~~al~~~~~~---~---~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 57 RLCNAGDCRAGVAFFQAAIQAGTED---L---RTLSAIYSQLGNAYFYLG--DYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSC---H---HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcHHHHHHHHHHHHHhcccC---h---hHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcc
Confidence 4567788999999888888752211 1 122334455555555564 49999999999999988765
No 75
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=52.97 E-value=31 Score=33.60 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=30.3
Q ss_pred eEEEEEecC-C-CceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCC--ceEEecccee
Q 003752 733 TIDSVTLSQ-E-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKS--GWRITDGSKI 795 (798)
Q Consensus 733 ~IdsV~~~~-~-g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g--~WkI~~~~Vi 795 (798)
-|.+|.+.. + |+.++|++.+ . +|..........+... ..+.|+|.+| +|||..=.|+
T Consensus 112 ~isNv~V~~~~~~d~a~vrs~~--~--~~~~r~~~~~~~~~g~--r~D~l~r~~~~~gwri~~R~v~ 172 (187)
T 1uli_B 112 VISNVMIVDGEKPGEYHVSSVF--I--VYRNRLERQLDIFAGE--RKDILRRTGSEAGFELAKRTIL 172 (187)
T ss_dssp EEEEEEEEECSSTTEEEEEEEE--E--EEEEETTTEEEEEEEE--EEEEEEECSSTTCEEEEEEEEE
T ss_pred EecCEEEEEeCCCCEEEEEEEE--E--EEEEcCCCceEEEEEE--EEEEEEECCCccceEEEEEEEE
Confidence 355555444 4 6778776654 1 2211100111123222 3378999988 9999976553
No 76
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=52.91 E-value=31 Score=32.27 Aligned_cols=20 Identities=10% Similarity=0.084 Sum_probs=13.9
Q ss_pred ceEEEEEEEEcCCceEEecc
Q 003752 773 TYTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 773 ty~vRY~L~r~~g~WkI~~~ 792 (798)
.++....++|.+|+|||...
T Consensus 109 ~~r~T~V~~k~~g~WkivH~ 128 (143)
T 2f86_B 109 QSQESRVWSKKQGRWVCVHV 128 (143)
T ss_dssp EEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEEEEeCCcEEEEEE
Confidence 44455556677899999764
No 77
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=52.67 E-value=52 Score=28.86 Aligned_cols=77 Identities=17% Similarity=0.053 Sum_probs=52.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++.+.|+++++++.-+.++.-.. ...++.+.++.++ ...+ +++.|...+++++++--... -...+
T Consensus 61 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~~ 125 (142)
T 2xcb_A 61 CRQSLGLYEQALQSYSYGALMDI---NEPRFPFHAAECH-------LQLG--DLDGAESGFYSARALAAAQP---AHEAL 125 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHTCG---GGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCcHHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHhCCCCc---chHHH
Confidence 56789999999999999886432 2234444444443 2333 59999999999998876433 35677
Q ss_pred HHHHHHHhHhhC
Q 003752 259 QAQIDETLEEIN 270 (798)
Q Consensus 259 q~eI~~~L~~L~ 270 (798)
..+++.-|..+.
T Consensus 126 ~~~~~~~l~~l~ 137 (142)
T 2xcb_A 126 AARAGAMLEAVT 137 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777877777654
No 78
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=51.97 E-value=61 Score=35.75 Aligned_cols=81 Identities=17% Similarity=0.341 Sum_probs=56.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCC
Q 003752 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLA 255 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~---~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~ 255 (798)
++...|+|++++.+.++.|.- .+|.. .+|++ .++--||.-.+.++ +|+.|..++++|++++...=++. -
T Consensus 349 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a----~~l~nLa~~~~~qg--~~~eA~~~~~~Al~i~~~~lG~~-H 420 (433)
T 3qww_A 349 VCLYMQDWEGALKYGQKIIKPYSKHYPVY-SLNVA----SMWLKLGRLYMGLE--NKAAGEKALKKAIAIMEVAHGKD-H 420 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCSS-CHHHH----HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCTT-C
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHcCCC-ChHHH----HHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHcCCC-C
Confidence 667899999999999999954 34443 34543 33445666677775 59999999999999998862211 3
Q ss_pred hHHHHHHHHHhHh
Q 003752 256 PDLQAQIDETLEE 268 (798)
Q Consensus 256 p~lq~eI~~~L~~ 268 (798)
|..+ +++..|++
T Consensus 421 p~~~-~l~~~l~~ 432 (433)
T 3qww_A 421 PYIS-EIKQEIES 432 (433)
T ss_dssp HHHH-HHHHHHHC
T ss_pred hHHH-HHHHHHhc
Confidence 5444 36666654
No 79
>2rsx_A Uncharacterized protein YOEB; inhibitor protein, hacksaw-like fold, autolysin inhibitor, D endopeptidase inhibitor, hydrolase inhibitor; NMR {Bacillus subtilis}
Probab=50.86 E-value=26 Score=34.32 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=28.2
Q ss_pred eEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccc
Q 003752 733 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGS 793 (798)
Q Consensus 733 ~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~ 793 (798)
+|.+++. ++|...++.+| .|.. +.+..++ ..+|+.++|+|||..+.
T Consensus 111 kik~~~~--~~nk~~~~~~v-----p~~~------~~~~~~~--kvtf~yE~~~WkIn~~d 156 (159)
T 2rsx_A 111 TAKLISK--KGSTITYEFTV-----PTLD------GSPSAKR--KVTFVKENKKWKVNQFD 156 (159)
T ss_dssp EEEEEEE--ETTEEEEEEEE-----CBTT------SCCCEEE--EEEEEESSSSEEESCTT
T ss_pred heEEEEe--cCCEEEEEEEE-----eeCC------CCceeEE--EEEEEEECCEEEEeecc
Confidence 6777743 45555555555 3322 2334454 45589999999998764
No 80
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=49.90 E-value=98 Score=31.22 Aligned_cols=45 Identities=13% Similarity=0.246 Sum_probs=36.6
Q ss_pred chHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 370 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
....+|..+++++.... ....++...+|+|..-+|+.++|...+.
T Consensus 180 ~~~~eA~~~~~~~l~~~---------------p~~~~~~~~la~~~~~~g~~~eA~~~l~ 224 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKC---------------SPTLLLLNGQAACHMAQGRWEAAEGVLQ 224 (291)
T ss_dssp THHHHHHHHHHHHHHHS---------------CCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhC---------------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 56888999999887642 1234788899999999999999999975
No 81
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=49.43 E-value=62 Score=35.47 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=49.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 003752 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~---~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~ 249 (798)
++...|+|++++.+.++.|.- .+|.. .+|+ |.++..||.-.+.++ +|+.|..++++|+.++...
T Consensus 338 ~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~----a~~l~nLa~~~~~~g--~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 338 ACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVR----GVQVMKVGKLQLHQG--MFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHH----HHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999954 34432 3443 445566677777775 5999999999999999986
No 82
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=48.58 E-value=49 Score=30.62 Aligned_cols=51 Identities=4% Similarity=0.036 Sum_probs=28.2
Q ss_pred EEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEE-cCCceEEec
Q 003752 734 IDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRITD 791 (798)
Q Consensus 734 IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r-~~g~WkI~~ 791 (798)
|..|.+ +|+.|++-.......+--++|.+. ....++.-.++| .+|.|||.-
T Consensus 80 ~~~i~v--~GD~A~~~~~~~~~~t~~~~g~~~-----~~~g~~~~v~rK~~dG~W~i~~ 131 (139)
T 3rob_A 80 FEEIVI--VEPMAYTRTHLHIKVTPRSGGAVR-----ELAGHAMSIFRRSMFGEWQLAR 131 (139)
T ss_dssp EEEEEE--ETTEEEEEEEEEEEEEETTSCCCE-----EEEEEEEEEEEECTTSCEEEEE
T ss_pred EEEEEE--cCCeEEEEEEEEEEEecCCCCcee-----EeeccEEEEEEECCCCcEEEEE
Confidence 444443 588898877775553322222211 123334446777 579999874
No 83
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=45.16 E-value=2.4e+02 Score=27.92 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=46.9
Q ss_pred HHHHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 177 LLVLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 177 L~lLqElge~~~vl~~g~~~L~~~--~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
..++...|+++++++.-+++|.-. .+.. -..|-++..++.-....+ +|+.|...+++|+++..+.|
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~a~~~~~lg~~~~~~g--~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKAGNE------DEAGNTYVEAYKCFKSGG--NSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcC
Confidence 346778899999888888777532 2221 134556667776666664 59999999999999988776
No 84
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=45.13 E-value=84 Score=28.18 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=51.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++.++|+++++++.-+.++.-.. ...++.+.++.+| +..+ +++.|...+++++++--... -+..+
T Consensus 64 ~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~~ 128 (148)
T 2vgx_A 64 CRQAMGQYDLAIHSYSYGAVMDI---XEPRFPFHAAECL-------LQXG--ELAEAESGLFLAQELIANXP---EFXEL 128 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHTTCG---GGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCchHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHHCcCCC---cchHH
Confidence 56799999999999999886422 1234444444443 3343 58999999999988765432 35677
Q ss_pred HHHHHHHhHhhC
Q 003752 259 QAQIDETLEEIN 270 (798)
Q Consensus 259 q~eI~~~L~~L~ 270 (798)
+..++..|..++
T Consensus 129 ~~~~~~~l~~l~ 140 (148)
T 2vgx_A 129 STRVSSMLEAIK 140 (148)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH
Confidence 788887777765
No 85
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=44.63 E-value=41 Score=32.75 Aligned_cols=57 Identities=12% Similarity=0.126 Sum_probs=30.2
Q ss_pred eEEEEEecC--CCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCC--ceEEecccee
Q 003752 733 TIDSVTLSQ--EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKS--GWRITDGSKI 795 (798)
Q Consensus 733 ~IdsV~~~~--~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g--~WkI~~~~Vi 795 (798)
-|.+|.|.. +|+.++|++.+ . +|..........+... ..+.|+|.+| +|||..=.|+
T Consensus 111 ~isNv~v~~~~~~d~~~v~s~~--~--~~~~r~~~~~~~~~g~--r~D~l~r~~~~~~wri~~R~v~ 171 (186)
T 1wql_B 111 IVSNVIVRETESAGTLEVSSAF--L--CYRNRLERMTDIYVGE--RRDILLRVSDGLGFKIAKRTIL 171 (186)
T ss_dssp EEEEEEEEECSSTTEEEEEEEE--E--EEEEETTTEEEEEEEE--EEEEEEECSSTTSEEEEEEEEE
T ss_pred EecCEEEEEecCCCEEEEEEEE--E--EEEEcCCCceEEEEEE--EEEEEEECCCccceEEEEEEEE
Confidence 355555444 37778776654 1 2211100101123222 3378999988 9999976553
No 86
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=44.45 E-value=1.2e+02 Score=25.34 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=45.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~--~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
++...|++++++++-+..++-. .+.. ...+.++..+|.-.+..+ +|+.|...+++++++.++.+
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDR------AVEAQSCYSLGNTYTLLQ--DYEKAIDYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHcc
Confidence 4567899999998888888532 1111 123445556666666664 59999999999999998875
No 87
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=44.02 E-value=1.3e+02 Score=25.16 Aligned_cols=79 Identities=14% Similarity=0.049 Sum_probs=50.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~l 258 (798)
++..+|+++++++.-+.+++-.. ...+....+|.++ +..+ +|+.|...+++++++-...+...--+.+
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~~--~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 47 ALAKLMSFPEAIADCNKAIEKDP---NFVRAYIRKATAQ-------IAVK--EYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCC---CcHHHHHHHHHHH-------HHHh--CHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 55689999999999999997422 1234444444443 3343 5999999999999987544332224566
Q ss_pred HHHHHHHhHhh
Q 003752 259 QAQIDETLEEI 269 (798)
Q Consensus 259 q~eI~~~L~~L 269 (798)
...|.....++
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 66666655544
No 88
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=42.50 E-value=30 Score=28.91 Aligned_cols=44 Identities=11% Similarity=0.012 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...|++..... ....++.+..|.|+.-+|+.++|...+.
T Consensus 22 ~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 22 NASRALALFEELVETD---------------PDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp CHHHHHHHHHHHHHHS---------------TTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888876533 1234788999999999999999999875
No 89
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=42.41 E-value=43 Score=28.28 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=43.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
++.+.|+++.++++-+..++-...... .-..+.++..++.-.+..+ ++..|...+++++++.++.|
T Consensus 98 ~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 98 TYTLLQDYEKAIDYHLKHLAIAQELKD----RIGEGRACWSLGNAYTALG--NHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHccc----hHhHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHhC
Confidence 556889999998888888853211111 1122445555666666665 49999999999999887643
No 90
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=40.90 E-value=2.1e+02 Score=27.29 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=43.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
.+...|+++.++++-+++++... ... ...+.++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~~-~~~-----~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 14 RLCKSGDCRAGVSFFEAAVQVGT-EDL-----KTLSAIYSQLGNAYFYLH--DYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCC-SCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHhhCc-ccH-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhhccc
Confidence 45678999999999999987522 211 122333445555555554 59999999999999988765
No 91
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=40.78 E-value=72 Score=27.13 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=30.1
Q ss_pred HHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 003752 214 ALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (798)
Q Consensus 214 ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~ 249 (798)
|.-|+++|+-.+.++ +|..|...++.|++++...
T Consensus 5 a~dc~~lG~~~~~~~--~y~~A~~W~~~Al~~~~~~ 38 (104)
T 2v5f_A 5 AEDCFELGKVAYTEA--DYYHTELWMEQALRQLDEG 38 (104)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcc--chHHHHHHHHHHHHhhhcc
Confidence 567999999999986 5999999999999998754
No 92
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=39.45 E-value=71 Score=27.26 Aligned_cols=17 Identities=18% Similarity=0.351 Sum_probs=12.0
Q ss_pred EEEEEcCCceEEeccce
Q 003752 778 YELSSTKSGWRITDGSK 794 (798)
Q Consensus 778 Y~L~r~~g~WkI~~~~V 794 (798)
...+|.+|+|||...+.
T Consensus 103 ~vw~r~~g~W~iv~~h~ 119 (123)
T 2r4i_A 103 RVWKLFDGNWKVIAGSC 119 (123)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEeCCeEEEEEEEE
Confidence 34556789999986653
No 93
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=39.29 E-value=53 Score=32.42 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=31.3
Q ss_pred eEEEE-EecC-C-CceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCc-eEEeccce
Q 003752 733 TIDSV-TLSQ-E-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSG-WRITDGSK 794 (798)
Q Consensus 733 ~IdsV-~~~~-~-g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~-WkI~~~~V 794 (798)
-|.+| .+.. + ++.++|.+.+ .+|... .+. .+..-.-+++|.|+|.+|+ |||..=.|
T Consensus 119 ~vsNv~~V~~~~~~d~~~vrs~~----~v~~~r-~~~-~~~~~~G~y~D~l~r~~~g~wri~~R~v 178 (194)
T 2bmo_B 119 FVTNVTAAKDKSAPEILHVRSNL----ILHRAR-REN-QVDVFYATREDKWKRIEGGGIKLVERFV 178 (194)
T ss_dssp EEEEEEEEECSSCTTEEEEEEEE----EEEEEE-TTT-EEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EecCEEEEEEcCCCCEEEEEEEE----EEEEec-CCC-ceEEEEEEEEEEEEECCCCCEEEEEEEE
Confidence 35566 5544 3 4667665443 233221 111 1111233688999999988 99997554
No 94
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=37.24 E-value=64 Score=31.31 Aligned_cols=19 Identities=16% Similarity=0.386 Sum_probs=14.3
Q ss_pred eEEEEEEEEcCCceEEecc
Q 003752 774 YTTRYELSSTKSGWRITDG 792 (798)
Q Consensus 774 y~vRY~L~r~~g~WkI~~~ 792 (798)
+++.|.++|.+|+|||...
T Consensus 133 ~raT~Vfrr~~ggWriv~h 151 (170)
T 3cnx_A 133 VVATNVFRRTPDGWKLWSH 151 (170)
T ss_dssp EEEEEEEECCTTCCEEEEE
T ss_pred EEEEEEEEEECCEEEEEEE
Confidence 4566777778899999864
No 95
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=36.59 E-value=1.1e+02 Score=27.42 Aligned_cols=15 Identities=20% Similarity=0.550 Sum_probs=10.6
Q ss_pred EEEcCCc--eEEeccce
Q 003752 780 LSSTKSG--WRITDGSK 794 (798)
Q Consensus 780 L~r~~g~--WkI~~~~V 794 (798)
.+|.+|+ |||...+.
T Consensus 114 w~k~~g~~gWriv~~h~ 130 (134)
T 3fsd_A 114 WRRTQGPAGWKLVAGHC 130 (134)
T ss_dssp EEEETTTTEEEEEEEEE
T ss_pred EEECCCCccceEeEeEE
Confidence 3456788 99986654
No 96
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=35.95 E-value=3.4e+02 Score=26.99 Aligned_cols=44 Identities=9% Similarity=0.042 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++....|.|+.-+|+.++|...+.
T Consensus 262 ~~~~A~~~~~~al~~~---------------p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 305 (365)
T 4eqf_A 262 RSEEAVEAYTRALEIQ---------------PGFIRSRYNLGISCINLGAYREAVSNFL 305 (365)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CCchHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4678888888776532 1224788899999999999999999875
No 97
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=35.79 E-value=1.3e+02 Score=27.05 Aligned_cols=65 Identities=23% Similarity=0.227 Sum_probs=45.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~--~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
++.+.|+++++++.-++.++-. .+.. ....+.+++.++.-.+..+ +|+.|...+++++++.++.+
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLASLPED-----PLAASANAYEVATVALHFG--DLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCcc-----HHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcc
Confidence 5678999999998888888642 2211 1223445555666666665 49999999999999988765
No 98
>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A
Probab=35.50 E-value=2.4e+02 Score=26.48 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=58.9
Q ss_pred HhcCCCC-CCCCcccccchhhHHHHHHHHHHHHHc-----CceEEeecceeeEEEEEecCCCceeEEEEEEEEEEeeecc
Q 003752 688 QAFGPDH-SLGKLPEVLDGQMLKVWTDRASEIAQL-----GWTYDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDT 761 (798)
Q Consensus 688 ~AlGp~h-~i~~L~eILtg~mL~~W~~~A~~l~~~-----~~y~~Y~l~~L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~ 761 (798)
.++|+.. +.+.+.+||.++++-.+...+....-+ |.-=-+. +++|+-+.-.+-|..+++.|+|.|. +
T Consensus 24 ~~~~~~~~~~~~~~~VlaTpamvalmE~aa~~~~~~~L~~g~~tVG~--~v~v~Hlapt~~G~~V~~~a~l~~v----~- 96 (139)
T 3kuv_A 24 RHLYPESPEFAEFPEVFASGFMVGLMEWACVRAMAPYLEPGEGSLGT--AICVTHTAATPPGLTVTVTAELRSV----E- 96 (139)
T ss_dssp HHHCTTCGGGTTCCSCBCHHHHHHHHHHHHHHHTGGGCCTTEEEEEE--EEEEECCSCCCTTSEEEEEEEEEEE----E-
T ss_pred HHhcCCcccccccCcEEeHHHHHHHHHHHHHHHHHhhCCCCCeEEEE--EEEEEEccCCCCCCEEEEEEEEEEE----C-
Confidence 4456542 336678899999998888876443322 3222233 4566666544568889999999777 1
Q ss_pred CcCCCCCCcccceEEEEEEEEcCCceEEeccceeec
Q 003752 762 VHPENCDEKISTYTTRYELSSTKSGWRITDGSKIVY 797 (798)
Q Consensus 762 g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi~~ 797 (798)
.. ++.++..-.++.=+|..|...||
T Consensus 97 --gr---------~~~f~v~a~d~~~~I~~G~h~r~ 121 (139)
T 3kuv_A 97 --GR---------RLSWRVSAHDGVDEIGSGTHERA 121 (139)
T ss_dssp --TT---------EEEEEEEEECSSSEEEEEEEEEE
T ss_pred --CC---------EEEEEEEEEECCEEEEEEEEEEE
Confidence 11 36666665554459999998876
No 99
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=35.00 E-value=6.1e+02 Score=29.65 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=37.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
++++.|+++++++.-+++|+-. |. .. -|+..+|.--..++ +|+.|.+.+++|+++
T Consensus 18 ~~~~~G~~~eAi~~~~kAl~l~-P~--~~-------~a~~nLg~~l~~~g--~~~eA~~~~~~Al~l 72 (723)
T 4gyw_A 18 IKREQGNIEEAVRLYRKALEVF-PE--FA-------AAHSNLASVLQQQG--KLQEALMHYKEAIRI 72 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-SC--CH-------HHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-CC--CH-------HHHHHHHHHHHHcC--CHHHHHHHHHHHHHh
Confidence 6789999999999999998642 11 12 23444444444443 588888888888765
No 100
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=34.55 E-value=1.2e+02 Score=25.08 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=40.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
++.+.|+++.+++.-+.+++.........++.+.+|.++.. .+ +++.|...+++++++
T Consensus 48 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-------~g--~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 48 SYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-------EG--KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------TT--CHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHH
Confidence 45688999999999999987544444445666666555533 33 488888888877764
No 101
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=34.53 E-value=1.4e+02 Score=33.35 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=47.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 003752 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~---~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~ 249 (798)
++...|+|++++.+.++.|.- .+|.. .+|+ |.++-.||.-.+.++ +|+.|..++++|+.++++.
T Consensus 360 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~----a~~l~nLa~~~~~~G--~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 360 VLSYLQAYEEASHYARRMVDGYMKLYHHN-NAQL----GMAVMRAGLTNWHAG--HIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCTT-CHHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHcCCC-CHHH----HHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999954 34443 3443 334445556666665 5999999999999999986
No 102
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=34.44 E-value=45 Score=28.20 Aligned_cols=44 Identities=7% Similarity=0.017 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...|++..... ....++.+..|.|..-+|+.++|...+.
T Consensus 42 ~~~~A~~~~~~al~~~---------------p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQF---------------PNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------CCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888876532 1235889999999999999999999874
No 103
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=34.34 E-value=1.2e+02 Score=25.53 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=39.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
++...|+++++++.-+++++.... ..++...++.++.. .+ ++..|...+++++++
T Consensus 36 ~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~-------~g--~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 36 TFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN-------LG--RYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH-------HT--CHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHh
Confidence 667899999999999999974221 25555555555433 32 488889999988875
No 104
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=32.65 E-value=3.4e+02 Score=25.98 Aligned_cols=201 Identities=7% Similarity=-0.058 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH-------------
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL------------- 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L------------- 245 (798)
++...|+++.+++.-+..++..... +-++..++.-....+. ++.|...+++++++
T Consensus 64 ~~~~~~~~~~A~~~~~~a~~~~~~~----------~~~~~~la~~~~~~~~--~~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (327)
T 3cv0_A 64 TQAENEKDGLAIIALNHARMLDPKD----------IAVHAALAVSHTNEHN--ANAALASLRAWLLSQPQYEQLGSVNLQ 131 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTSTTTTTC------
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcCC----------HHHHHHHHHHHHHcCC--HHHHHHHHHHHHHhCCccHHHHHHHhH
Q ss_pred ----------------HHHhCCCCCChHHHHHHHHHhHhhCh--hhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhCCC
Q 003752 246 ----------------LQEEGASSLAPDLQAQIDETLEEINP--RCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGG 307 (798)
Q Consensus 246 ----------------L~~~g~~~L~p~lq~eI~~~L~~L~P--~~iLELLalPl~~e~~~~Rq~Gl~lLr~lL~~rg~~ 307 (798)
+...| -.+.-.++-+..-++.| ..++-.|+.=+ ....+-.+++..++.++.....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~----~~~~A~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~~~~A~~~~~~~~~~~~~- 204 (327)
T 3cv0_A 132 ADVDIDDLNVQSEDFFFAAPN----EYRECRTLLHAALEMNPNDAQLHASLGVLY--NLSNNYDSAAANLRRAVELRPD- 204 (327)
T ss_dssp --------------CCTTSHH----HHHHHHHHHHHHHHHSTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHhHHHHHcc----cHHHHHHHHHHHHhhCCCCHHHHHHHHHHH--HHhccHHHHHHHHHHHHHhCCC-
Q ss_pred CCCccCCCCChHHHHHHHHhhccHHHH---HHhhhcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhh
Q 003752 308 GATAIAGGFTRESFMNEAFLRMTSAEQ---VKLFSATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQ 384 (798)
Q Consensus 308 g~~~~~~gl~~~dFl~q~~~~LTa~EQ---v~LF~~~~~~~~~~~~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~ 384 (798)
+.+.+..-+..++....- ++.|...-...+......+..+.++...| -..+|...+++...
T Consensus 205 ---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g-------~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 205 ---------DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMS-------QYDLAAKQLVRAIY 268 (327)
T ss_dssp ---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHH
T ss_pred ---------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc-------cHHHHHHHHHHHHH
Q ss_pred CCCCccccccccccccchh------------hhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 385 NKVPTLRDLGSIYIPLEKH------------EMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~------------~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.. .. ..++....+.|..-+|+.++|...+.
T Consensus 269 ~~---------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 310 (327)
T 3cv0_A 269 MQ---------------VGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYA 310 (327)
T ss_dssp HH---------------TTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred hC---------------CccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHH
No 105
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=32.29 E-value=49 Score=29.03 Aligned_cols=44 Identities=20% Similarity=0.212 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++++..|.|++-+|+.++|..++.
T Consensus 67 ~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 67 LYEQALQSYSYGALMD---------------INEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcC---------------CCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4567888888776532 1234788999999999999999999875
No 106
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=32.26 E-value=1e+02 Score=25.56 Aligned_cols=56 Identities=7% Similarity=-0.144 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.|.-+.++...| -..+|...|++..... ....++....|.|+.-+|+.++|...+.
T Consensus 22 ~~~lg~~~~~~g-------~~~~A~~~~~~al~~~---------------p~~~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 22 RFTLGKTYAEHE-------QFDAALPHLRAALDFD---------------PTYSVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHHC---------------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 444445554444 3567888888776532 1234788999999999999999999975
No 107
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=31.82 E-value=1.2e+02 Score=26.82 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=15.1
Q ss_pred EEEEEEEEcCCceEEeccc
Q 003752 775 TTRYELSSTKSGWRITDGS 793 (798)
Q Consensus 775 ~vRY~L~r~~g~WkI~~~~ 793 (798)
+..+.++|.+|+|||....
T Consensus 105 ~~t~v~~r~~~gWrIv~~H 123 (129)
T 2rcd_A 105 RQMQTWVKMPEGWRIVAAH 123 (129)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCCcEEEEEEe
Confidence 4577788899999998654
No 108
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=31.24 E-value=76 Score=25.52 Aligned_cols=44 Identities=9% Similarity=0.103 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++....|.|++-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 19 LYREAVHCYDQLITAQ---------------PQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4567777777765432 1234788999999999999999998875
No 109
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.90 E-value=1.5e+02 Score=24.51 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=41.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
.+.+.|+++.+++.-+.+++.........++.+.++.++. ..+ +|..|...+++++++
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-------~~~--~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-------ATR--NFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-------HTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-------Hhc--cHHHHHHHHHHHHHH
Confidence 4568899999999999998765445555566666555543 333 588888888887764
No 110
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.45 E-value=1.1e+02 Score=25.21 Aligned_cols=45 Identities=4% Similarity=-0.241 Sum_probs=34.9
Q ss_pred chHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 370 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.-..+|...+++..... ....++....|.|..-+|+.++|...+.
T Consensus 64 ~~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 64 LEFQLALKDCEECIQLE---------------PTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhC---------------CCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 35678888888776532 1234788999999999999999999975
No 111
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=28.69 E-value=3.4e+02 Score=25.50 Aligned_cols=131 Identities=10% Similarity=0.021 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhccCh-hchHHHhhcccCCCCCCCcccCCCCccchhHHHHH---
Q 003752 106 DGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANA-SSRREYNQGLADDHADTILTEVPWDKVPGALLVLQ--- 181 (798)
Q Consensus 106 eeIKkAYRkla~~~PDk~~s~~a~~~Rf~~L~eAYevLsDp-~~R~~YD~~l~~~~~~~~~lei~~~~~~GaL~lLq--- 181 (798)
++-.+.|.+....+|+..+..++ . -.+..+|.-++|. +....|++.+...+. .. .++...+.=|.+...
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~a---~-~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~--~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQV---Q-LDLIYAYYKNADLPLAQAAIDRFIRLNPT-HP--NIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHHH---H-HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CT--THHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCChHHHHH---H-HHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CC--cHHHHHHHHHHHHHhhhh
Confidence 44556777777777876443322 2 2356778788874 345567766643311 01 011112222233222
Q ss_pred --------------HhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHH-------HHhhHhhHHHHHcCCCchhhHhHHHH
Q 003752 182 --------------EAGETEVVLRIGESLLRERLPKSFKQDVVLAMA-------LAYVDISRDAMAFNPPDYIGGCEMLE 240 (798)
Q Consensus 182 --------------Elge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~A-------LA~~~larea~~~~~~~~~~a~~~Le 240 (798)
+.|+++.+++.=+.+++.........+...-++ -++..+|.--+.++ +|..|...++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~ 171 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG--AWVAVVNRVE 171 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 367888888888888875443333333322221 12233444444443 4877777777
Q ss_pred HHHHH
Q 003752 241 RALKL 245 (798)
Q Consensus 241 ~al~L 245 (798)
++++.
T Consensus 172 ~~l~~ 176 (225)
T 2yhc_A 172 GMLRD 176 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 112
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=28.62 E-value=1.5e+02 Score=28.83 Aligned_cols=54 Identities=4% Similarity=-0.086 Sum_probs=27.6
Q ss_pred CCceeEEEEEEEEEEeeeccCcCCCCCCcc-cceEEEEEEEEcCCceEEecccee
Q 003752 742 EGRHAWVEATVKESARLTDTVHPENCDEKI-STYTTRYELSSTKSGWRITDGSKI 795 (798)
Q Consensus 742 ~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~-~ty~vRY~L~r~~g~WkI~~~~Vi 795 (798)
+.+.|+..-.+.-....|.++........- ..-...+..+|.+|+|||+.-...
T Consensus 96 ~dt~a~g~~~~~~~~~~y~d~~~~~~~~~ghg~G~Y~~~Y~r~dG~WkIa~~~~~ 150 (172)
T 1idp_A 96 SEDEVIGYHQLRVPHQRYKDTTMKEVTMKGHAHSANLHWYKKIDGVWKFAGLKPD 150 (172)
T ss_dssp ETTEEEEEEEEEEEEEEESSTTCCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCeEEEEEEEEEcccccccccccceeecccccccceEEEEEECCEEEEEEEEEE
Confidence 344555555555555566433222200000 001244555778999999976653
No 113
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=28.28 E-value=1.9e+02 Score=24.92 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=41.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhh--cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 179 VLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~--~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
++.++|+++++++.-+.+|+- .....+ ..+|-+|..+|.-....+ +|..|.+.+++++++
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~-----~~~a~~~~~lg~~~~~~~--~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 51 VYFEEKKFAECVQFCEKAVEVGRETRADY-----KLIAKAMSRAGNAFQKQN--DLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcccchhh-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhh
Confidence 577899999999999999853 222222 123445555665555554 599999999998763
No 114
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=28.20 E-value=4.1e+02 Score=27.82 Aligned_cols=58 Identities=14% Similarity=-0.014 Sum_probs=33.6
Q ss_pred HHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 356 ALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 356 alAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
+.++...|....+-.-..+|...+++..... .. .++.+..|.|..-+|+.++|...+.
T Consensus 243 ~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~---------------~~-~~~~~~l~~~~~~~~~~~~A~~~~~ 300 (537)
T 3fp2_A 243 ALALCYTGIFHFLKNNLLDAQVLLQESINLH---------------PT-PNSYIFLALTLADKENSQEFFKFFQ 300 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------CC-HHHHHHHHHHTCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhcC---------------CC-chHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3344444444333335567777777766532 01 3566667777777777777776653
No 115
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=27.91 E-value=5e+02 Score=26.44 Aligned_cols=44 Identities=14% Similarity=0.025 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++....|.|..-+|+.++|...++
T Consensus 310 ~~~~A~~~~~~a~~~~---------------p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 353 (450)
T 2y4t_A 310 KPVEAIRVCSEVLQME---------------PDNVNALKDRAEAYLIEEMYDEAIQDYE 353 (450)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------cccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4678888888765422 1234888999999999999999999975
No 116
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=27.46 E-value=78 Score=25.37 Aligned_cols=43 Identities=12% Similarity=0.009 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhCCCCccccccccccccchhhhh-hHHHHHHHHHhhCChhHHHHHhc
Q 003752 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEME-FALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 372 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~D-v~le~a~C~LLLGq~~eA~~~l~ 429 (798)
..+|...++++.... ....+ +++..|.|..-+|+.++|...+.
T Consensus 16 ~~~A~~~~~~al~~~---------------p~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 16 IENALQALEEFLQTE---------------PVGKDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHHHHHC---------------SSTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC---------------CCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888776532 12346 88999999999999999999975
No 117
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=27.37 E-value=5.5e+02 Score=26.78 Aligned_cols=181 Identities=12% Similarity=0.076 Sum_probs=100.5
Q ss_pred hhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHHHHHH
Q 003752 183 AGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDLQAQI 262 (798)
Q Consensus 183 lge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~lq~eI 262 (798)
.|.++.++++-+.+++.. +...++....+.+++.++.-.+..+ +++.|...+++++++ . +. +...-
T Consensus 215 ~~~~~~A~~~~~~~l~~~---p~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~~~~~---~--~~--~~~~~-- 280 (537)
T 3fp2_A 215 NDLLTKSTDMYHSLLSAN---TVDDPLRENAALALCYTGIFHFLKN--NLLDAQVLLQESINL---H--PT--PNSYI-- 280 (537)
T ss_dssp HHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH---C--CC--HHHHH--
T ss_pred HHHHHHHHHHHHHHHHHC---CCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHhc---C--CC--chHHH--
Confidence 356777777777777532 2236677777888888888777775 599999999888874 1 11 22111
Q ss_pred HHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhCCCCCCccCCCCChHHHHH--HHHhhcc-HHHHHHhhh
Q 003752 263 DETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMN--EAFLRMT-SAEQVKLFS 339 (798)
Q Consensus 263 ~~~L~~L~P~~iLELLalPl~~e~~~~Rq~Gl~lLr~lL~~rg~~g~~~~~~gl~~~dFl~--q~~~~LT-a~EQv~LF~ 339 (798)
.|-.+-.-.+ +-.+++..++.++..... +.+.+.. .+...+- -.+=.+.|.
T Consensus 281 -----------~l~~~~~~~~-----~~~~A~~~~~~~~~~~~~----------~~~~~~~l~~~~~~~~~~~~A~~~~~ 334 (537)
T 3fp2_A 281 -----------FLALTLADKE-----NSQEFFKFFQKAVDLNPE----------YPPTYYHRGQMYFILQDYKNAKEDFQ 334 (537)
T ss_dssp -----------HHHHHTCCSS-----CCHHHHHHHHHHHHHCTT----------CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -----------HHHHHHHHhc-----CHHHHHHHHHHHhccCCC----------CHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 1112222222 245677778777763111 1112211 1111100 001122222
Q ss_pred ----cCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHH
Q 003752 340 ----ATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCS 415 (798)
Q Consensus 340 ----~~~~~~~~~~~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~ 415 (798)
..|.+. ...+..+.++...| -..+|..+|++..... ....++....|.|.
T Consensus 335 ~a~~~~~~~~----~~~~~la~~~~~~g-------~~~~A~~~~~~~~~~~---------------~~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 335 KAQSLNPENV----YPYIQLACLLYKQG-------KFTESEAFFNETKLKF---------------PTLPEVPTFFAEIL 388 (537)
T ss_dssp HHHHHCTTCS----HHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHC---------------TTCTHHHHHHHHHH
T ss_pred HHHHhCCCCH----HHHHHHHHHHHHcC-------CHHHHHHHHHHHHHhC---------------CCChHHHHHHHHHH
Confidence 123322 12334444444443 3678888888876532 12347888899999
Q ss_pred HhhCChhHHHHHhc
Q 003752 416 LLVGKLDECRLWLG 429 (798)
Q Consensus 416 LLLGq~~eA~~~l~ 429 (798)
.-+|+.++|...+.
T Consensus 389 ~~~g~~~~A~~~~~ 402 (537)
T 3fp2_A 389 TDRGDFDTAIKQYD 402 (537)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHhCCHHHHHHHHH
Confidence 99999999999975
No 118
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=27.16 E-value=4.3e+02 Score=25.47 Aligned_cols=46 Identities=13% Similarity=0.020 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhccC
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGLD 431 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~l~ 431 (798)
-..+|...+++..... ....++....|.|..-+|+.++|...+...
T Consensus 287 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 332 (359)
T 3ieg_A 287 KPVEAIRICSEVLQME---------------PDNVNALKDRAEAYLIEEMYDEAIQDYEAA 332 (359)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3678888888876532 123588899999999999999999998533
No 119
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=26.93 E-value=67 Score=28.85 Aligned_cols=44 Identities=20% Similarity=0.102 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++++..|.|++-+|+.++|...+.
T Consensus 70 ~~~~A~~~~~~al~l~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMD---------------IXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp CHHHHHHHHHHHHHHS---------------TTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcC---------------CCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3467777777765432 1234788999999999999999999875
No 120
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=26.70 E-value=2.9e+02 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.006 Sum_probs=12.6
Q ss_pred HHHHhhhHHHHHHHHHHHhh
Q 003752 179 VLQEAGETEVVLRIGESLLR 198 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~ 198 (798)
++...|+++.++++-+..++
T Consensus 236 ~~~~~g~~~~A~~~~~~al~ 255 (406)
T 3sf4_A 236 AYIFLGEFETASEYYKKTLL 255 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHH
Confidence 55566666666666666664
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=26.49 E-value=62 Score=29.88 Aligned_cols=44 Identities=11% Similarity=0.164 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++...-. ....+.++..|.|++-+|+.++|...+.
T Consensus 85 ~~~~Ai~~~~~al~l~---------------P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 85 QFQQAADLYAVAFALG---------------KNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp CHHHHHHHHHHHHHHS---------------SSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhC---------------CCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4667888887776532 1234889999999999999999999985
No 122
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=25.51 E-value=6.4e+02 Score=26.88 Aligned_cols=44 Identities=9% Similarity=-0.022 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.+.+|..+|+++.... ....++....+.+..-.|+.++|...+.
T Consensus 456 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 499 (597)
T 2xpi_A 456 NILLANEYLQSSYALF---------------QYDPLLLNELGVVAFNKSDMQTAINHFQ 499 (597)
T ss_dssp CHHHHHHHHHHHHHHC---------------CCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------CCChHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 5778888888876532 1123677888999999999999999875
No 123
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=25.44 E-value=76 Score=28.29 Aligned_cols=44 Identities=7% Similarity=-0.015 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....+++..+|.|++-+|+.++|...+.
T Consensus 26 ~~~~A~~~~~~al~~~---------------p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 26 EYSKAIDLYTQALSIA---------------PANPIYLSNRAAAYSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------CcCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 4577888888776532 1235889999999999999999999874
No 124
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=25.28 E-value=66 Score=29.70 Aligned_cols=57 Identities=11% Similarity=0.187 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 351 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 351 ~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
..|.-++++...| -..+|...|+++.... ....+++...|.|+.-+|+.++|...+.
T Consensus 38 ~~~~lg~~~~~~g-------~~~eA~~~~~~al~~~---------------P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 38 DIYSYAYDFYNKG-------RIEEAEVFFRFLCIYD---------------FYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-------CHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3455555555444 4688999999887643 2245889999999999999999999874
No 125
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=24.98 E-value=84 Score=26.45 Aligned_cols=56 Identities=11% Similarity=-0.009 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.+.-+.++...| -..+|...+++..... ....+.++..|.|...+|+.++|...+.
T Consensus 41 ~~~~a~~~~~~~-------~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 41 YSNRAAALAKLM-------SFPEAIADCNKAIEKD---------------PNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhc-------CHHHHHHHHHHHHHhC---------------CCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344445555443 4567888777776532 1235788999999999999999999875
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=24.57 E-value=97 Score=23.94 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++....|.|..-+|+.++|...+.
T Consensus 24 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4567888887776432 1134788899999999999999999875
No 127
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=23.73 E-value=4.2e+02 Score=24.20 Aligned_cols=44 Identities=7% Similarity=-0.006 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...|++..... ....++....|.|..-+|+.++|...+.
T Consensus 188 ~~~~A~~~~~~al~~~---------------~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 231 (258)
T 3uq3_A 188 SFPEAIADCNKAIEKD---------------PNFVRAYIRKATAQIAVKEYASALETLD 231 (258)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC---------------HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567888888776532 1235788999999999999999999975
No 128
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=23.37 E-value=1.6e+02 Score=25.26 Aligned_cols=56 Identities=20% Similarity=0.097 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.|.-+.+++..| -..+|...|++..... ....+..+..|.|+.-+|+.++|...++
T Consensus 20 ~~~~g~~~~~~g-------~~~~A~~~~~~al~~~---------------P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 75 (121)
T 1hxi_A 20 PMEEGLSMLKLA-------NLAEAALAFEAVCQKE---------------PEREEAWRSLGLTQAENEKDGLAIIALN 75 (121)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CHHHHHHHHHHHHHHC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455566666655 3567888888776532 2245888999999999999999998874
No 129
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=23.21 E-value=1.4e+02 Score=27.94 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=54.0
Q ss_pred HHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHHHHHHHHHhHhhChhhHHHhhCCCC
Q 003752 213 MALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPL 282 (798)
Q Consensus 213 ~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L~p~lq~eI~~~L~~L~P~~iLELLalPl 282 (798)
-|+-++..|+.+++++ +++...+.+.+|+.++..=. .+|=++.-.+|...|..|==|++-+|+.--+
T Consensus 35 gal~~l~~A~~ai~~~--d~~~k~~~i~KA~~Ii~~L~-~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~ 101 (131)
T 3iqc_A 35 GILRFSSQAKRCIENE--DIEKKIYYINRVTDIFTELL-NILDYEKGGEVAVYLTGLYTHQIKVLTQANV 101 (131)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHH-HTBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHH-HhcCCccccHHHHHHHHHHHHHHHHHHHhhh
Confidence 4677888899999985 59999999999999886532 3455666679999999999999988875443
No 130
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=23.12 E-value=88 Score=27.83 Aligned_cols=56 Identities=11% Similarity=-0.088 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.|.-+.+++..| -..+|...+++..... ....++++..|.|+.-+|+.++|...+.
T Consensus 48 ~~~l~~~~~~~g-------~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 48 LSNRAAAYSASG-------QHEKAAEDAELATVVD---------------PKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 444455555544 3577888888776532 1235889999999999999999999965
No 131
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=22.45 E-value=6e+02 Score=25.46 Aligned_cols=45 Identities=13% Similarity=0.036 Sum_probs=33.7
Q ss_pred chHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 370 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.-..+|...+++..... ....+.+...+.|..-+|+.++|...++
T Consensus 319 g~~~~A~~~~~~al~~~---------------p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 363 (388)
T 1w3b_A 319 GNIEEAVRLYRKALEVF---------------PEFAAAHSNLASVLQQQGKLQEALMHYK 363 (388)
T ss_dssp TCHHHHHHHHHHHTTSC---------------TTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---------------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35678888888876432 1234678889999999999999998875
No 132
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.75 E-value=1.1e+02 Score=25.74 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|...+++..... ....++.+..|.|+..+|+.++|..++.
T Consensus 80 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 123 (148)
T 2dba_A 80 DYDKAETEASKAIEKD---------------GGDVKALYRRSQALEKLGRLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHHT---------------SCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhC---------------ccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4577888887766432 1134888999999999999999999875
No 133
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=21.61 E-value=5.9e+02 Score=25.12 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=44.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 003752 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (798)
Q Consensus 179 lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~LL~~~g 250 (798)
.+...|+++.++++-+++++..... .+ ..+-++..+|.-.+..+ +|+.|...+++++++....+
T Consensus 18 ~~~~~g~~~~A~~~~~~al~~~~~~---~~---~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 81 (406)
T 3sf4_A 18 RLCKSGDCRAGVSFFEAAVQVGTED---LK---TLSAIYSQLGNAYFYLH--DYAKALEYHHHDLTLARTIG 81 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSC---HH---HHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccHHHHHHHHHHHHhcCccc---HH---HHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhcc
Confidence 4567899999999999988752211 11 22344555555555554 59999999999999988765
No 134
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=21.23 E-value=2.7e+02 Score=23.77 Aligned_cols=56 Identities=11% Similarity=-0.028 Sum_probs=37.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 178 ~lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
..+.+.|+++++++.-+.+++... ...+....++.++ ...+ ++..|...+++++++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P---~~~~a~~~lg~~~-------~~~g--~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEP---EREEAWRSLGLTQ-------AENE--KDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHST---TCHHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCC---CCHHHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHh
Confidence 356689999999999999987422 2234444444443 3333 488888888888775
No 135
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=21.13 E-value=2e+02 Score=27.48 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHh
Q 003752 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (798)
Q Consensus 349 ~~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l 428 (798)
....|.-+++||- +++|..|++|-.+|+.+-...- .....|-..-.|+.+.-+|+.++|...+
T Consensus 32 ~~~~F~ya~~Lv~----S~~~~~~~~gI~lLe~ll~~~~-------------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 32 KSTQFEYAWCLVR----SKYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------ccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 3447777788774 7889999999999999986320 1134589999999999999999999986
Q ss_pred c
Q 003752 429 G 429 (798)
Q Consensus 429 ~ 429 (798)
.
T Consensus 95 ~ 95 (152)
T 1pc2_A 95 R 95 (152)
T ss_dssp H
T ss_pred H
Confidence 4
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=21.03 E-value=81 Score=25.95 Aligned_cols=43 Identities=7% Similarity=0.033 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 372 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
..+|...+++..... ....++....|.|.+.+|+.++|...+.
T Consensus 32 ~~~A~~~~~~al~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 32 YPQAMKHYTEAIKRN---------------PKDAKLYSNRAACYTKLLEFQLALKDCE 74 (133)
T ss_dssp SHHHHHHHHHHHTTC---------------TTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---------------CCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 467888888876532 1235888999999999999999998875
No 137
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=20.77 E-value=2.8e+02 Score=23.98 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=0.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 003752 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (798)
Q Consensus 178 ~lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~~~larea~~~~~~~~~~a~~~Le~al~L 245 (798)
.++.++|+++++++.-+.+|+-.... +-|+.-+|.--+..+. |+.|.+.+++++++
T Consensus 55 ~~~~~~~~~~~A~~~~~~al~~~p~~----------~~a~~~lg~~~~~~~~--~~~A~~~~~~al~l 110 (126)
T 4gco_A 55 ACLTKLMEFQRALDDCDTCIRLDSKF----------IKGYIRKAACLVAMRE--WSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH
T ss_pred hHHHhhccHHHHHHHHHHHHHhhhhh----------hHHHHHHHHHHHHCCC--HHHHHHHHHHHHHH
No 138
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=20.75 E-value=4.5e+02 Score=25.42 Aligned_cols=88 Identities=9% Similarity=0.074 Sum_probs=50.8
Q ss_pred hHHHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHh-hHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCC
Q 003752 176 ALLVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAY-VDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSL 254 (798)
Q Consensus 176 aL~lLqElge~~~vl~~g~~~L~~~~~~~~~~Dv~Ls~ALA~-~~larea~~~~~~~~~~a~~~Le~al~LL~~~g~~~L 254 (798)
++.++-+ |+|.++=++=+.+=....+...+.++. .+|.. +..|---++.++ ...|..++.+|+..|.......+
T Consensus 39 ~i~lFn~-g~yfeaHEvLEe~W~~~~~~~~er~~l--qGLIQ~lAvAl~H~~rgN--~~GA~~ll~~Al~~L~~~~~~~~ 113 (161)
T 2ijq_A 39 GVRLYNS-GEFHESHDCFEDEWYNYGRGNTESKFL--HGMVQVAAGAYKHFDFED--DDGMRSLFRTSLQYFRGVPNDYY 113 (161)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHTTTTCSSSHHHHHH--HHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHTTSCTTGG
T ss_pred HHHHHhC-CCchHHHHHHHHHHHhcCCCchHHHHH--HHHHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHhCCCccC
Confidence 3334444 888775444443333222222234433 55555 555555666655 88889999999999987653211
Q ss_pred C---hHHHHHHHHHhHh
Q 003752 255 A---PDLQAQIDETLEE 268 (798)
Q Consensus 255 ~---p~lq~eI~~~L~~ 268 (798)
. ..|+..|++.+.+
T Consensus 114 GIDv~~L~~~~~~~l~d 130 (161)
T 2ijq_A 114 GVDLLDVRTTVTNALSD 130 (161)
T ss_dssp GBCHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHhhC
Confidence 1 4566677766653
No 139
>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.85A {Thermus thermophilus} SCOP: d.38.1.7
Probab=20.54 E-value=4.9e+02 Score=23.80 Aligned_cols=79 Identities=15% Similarity=-0.001 Sum_probs=50.8
Q ss_pred cccchhhHHHHHHHHHHHHH-----cCceEEeecceeeEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceE
Q 003752 701 EVLDGQMLKVWTDRASEIAQ-----LGWTYDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYT 775 (798)
Q Consensus 701 eILtg~mL~~W~~~A~~l~~-----~~~y~~Y~l~~L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~ 775 (798)
+++.++++-.|...+...-- .|...-|. +++|+-+.-..-|+.++++|++.+. +. ..++
T Consensus 32 ~v~a~~a~~~l~E~~~~~~~~~~l~~g~~~Vg~--~i~~~hl~pv~~G~~V~a~a~~~~~---------~~-----~~~~ 95 (141)
T 2cwz_A 32 PVYATYWMVKHMELAGRKIILPFLEEGEEGIGS--YVEARHLASALPGMRVRVVARHEKT---------EG-----NRVY 95 (141)
T ss_dssp EEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEE--EEEEEECSCCCTTCEEEEEEEEEEE---------ET-----TEEE
T ss_pred hHhchHHHHHHHHHHHHHHHHHhCCCCCcEEEE--EEEEEEcccCCCCCEEEEEEEEEEE---------CC-----CEEE
Confidence 67888887777665432222 34444454 5566666544468889999999655 12 4567
Q ss_pred EEEEEEEcCCceEEeccceee
Q 003752 776 TRYELSSTKSGWRITDGSKIV 796 (798)
Q Consensus 776 vRY~L~r~~g~WkI~~~~Vi~ 796 (798)
++++...++|. +|+.|...+
T Consensus 96 ~~v~i~d~~g~-lv~~g~~t~ 115 (141)
T 2cwz_A 96 ARVEAYNELGD-LIGVGRTEQ 115 (141)
T ss_dssp EEEEEEETTCC-EEEEEEEEE
T ss_pred EEEEEEECCCC-EEEEEEEEE
Confidence 88888776655 888887644
No 140
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=20.50 E-value=1.3e+02 Score=24.04 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|..++++..... ....++....+.|..-.|+.++|...+.
T Consensus 24 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 67 (125)
T 1na0_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (125)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC---------------cCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4677888888776432 1234778889999999999999998874
No 141
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=20.48 E-value=2.6e+02 Score=27.55 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=30.8
Q ss_pred eEEEEEe--cCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceEEEEEEEEcCCceEEeccceeec
Q 003752 733 TIDSVTL--SQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKIVY 797 (798)
Q Consensus 733 ~IdsV~~--~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~vRY~L~r~~g~WkI~~~~Vi~~ 797 (798)
++..+.+ ..||+.+.||.+. ..+....|.++ ..|+.+|-.+ |++.||+|+.|
T Consensus 105 ~~~~~~v~~taDpd~VvvE~~~--~Gtv~~TGkp~------~~Y~~~yi~V-----~rVrDGKIv~~ 158 (185)
T 3jum_A 105 VWTDIQIFETQDPNWFWVECRG--EGAIVFPGYPR------GQYRNHFLHS-----FRFENGLIKEQ 158 (185)
T ss_dssp EEEEEEEECCSSTTEEEEEEEE--EEEECCTTSCC------EEEEEEEEEE-----EEEETTEEEEE
T ss_pred eeeEEEEEEecCCCEEEEEEEE--EEEEcCCCCcc------ceEEEeEEEE-----EEEECCEEEEE
Confidence 3444443 3489999998776 33333333322 2366777665 56778888766
No 142
>2q78_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7
Probab=20.42 E-value=5.7e+02 Score=24.48 Aligned_cols=83 Identities=13% Similarity=0.020 Sum_probs=50.7
Q ss_pred cccccchhhHHHHHHHHHHHHHcCce---EEeecceeeEEEEEecCCCceeEEEEEEEEEEeeeccCcCCCCCCcccceE
Q 003752 699 LPEVLDGQMLKVWTDRASEIAQLGWT---YDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYT 775 (798)
Q Consensus 699 L~eILtg~mL~~W~~~A~~l~~~~~y---~~Y~l~~L~IdsV~~~~~g~~A~VeA~V~E~a~Ly~~g~~~~~~Sy~~ty~ 775 (798)
+-+||.++++..+...|....-+.+. +.-.=.+++|+-+.-.+-|..++++|++.+.. . +.++
T Consensus 44 ~~~VlaTpamvaLmE~aa~~~v~~~L~eg~~tVG~~v~v~Hlapt~~G~~Vta~A~l~~v~---------g-----r~l~ 109 (153)
T 2q78_A 44 DLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGTRVAVGVRVVGVV---------G-----NRVK 109 (153)
T ss_dssp GGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSEEEEEEEEEEEEE---------T-----TEEE
T ss_pred CCCEeecHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEeEECcCCCCCCEEEEEEEEEEEC---------C-----CEEE
Confidence 56899999999999887554444332 33222455666665455677889989887761 1 2333
Q ss_pred EEEEEEEcCCceEEeccceeec
Q 003752 776 TRYELSSTKSGWRITDGSKIVY 797 (798)
Q Consensus 776 vRY~L~r~~g~WkI~~~~Vi~~ 797 (798)
++-+..-+ ++ +|..|...|+
T Consensus 110 f~V~A~d~-~~-~Ig~Gth~R~ 129 (153)
T 2q78_A 110 FRGIVMSG-DE-KILEAEFVRA 129 (153)
T ss_dssp EEEEEEET-TE-EEEEEEEEEE
T ss_pred EEEEEEEC-Cc-eEEEEEEEEE
Confidence 33333322 33 7888877654
No 143
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=20.41 E-value=4.6e+02 Score=23.38 Aligned_cols=30 Identities=3% Similarity=0.012 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Q 003752 670 MDARLAEDIVRKWQNIKSQAFGPDHSLGKLPEVLD 704 (798)
Q Consensus 670 lt~~~Ae~lV~~Wq~aKa~AlGp~h~i~~L~eILt 704 (798)
|+.+..+++|++|..+ + ..++++.+.++++
T Consensus 1 Ms~~~~~~~v~~~~~a----~-~~~d~~~~~~~~a 30 (152)
T 2gex_A 1 MSTTANKERCLEMVAA----W-NRWDVSGVVAHWA 30 (152)
T ss_dssp -CHHHHHHHHHHHHHH----H-HTTCHHHHHTTEE
T ss_pred CChhHHHHHHHHHHHH----H-hCCCHHHHHHHcC
Confidence 6677888999999875 2 2344444444443
No 144
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=20.33 E-value=8.1e+02 Score=26.22 Aligned_cols=50 Identities=10% Similarity=0.100 Sum_probs=37.2
Q ss_pred CCchHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 368 QPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 368 kP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
.+.-..+|...+++..... |......+++...|.|+.-+|+.++|...+.
T Consensus 233 ~~g~~~~A~~~~~~al~~~------------p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 282 (474)
T 4abn_A 233 NPKISQQALSAYAQAEKVD------------RKASSNPDLHLNRATLHKYEESYGEALEGFS 282 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHC------------GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhC------------CCcccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3456778888888776532 0011356889999999999999999999875
No 145
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=20.18 E-value=1.3e+02 Score=24.39 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCCCCccccccccccccchhhhhhHHHHHHHHHhhCChhHHHHHhc
Q 003752 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (798)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~le~a~C~LLLGq~~eA~~~l~ 429 (798)
-..+|..++++..... ....++....|.|.+..|+.++|...+.
T Consensus 19 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 62 (131)
T 1elr_A 19 DFDTALKHYDKAKELD---------------PTNMTYITNQAAVYFEKGDYNKCRELCE 62 (131)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4678888888876532 1234788999999999999999999875
Done!