BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003754
(798 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2
SV=3
Length = 1278
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/802 (67%), Positives = 659/802 (82%), Gaps = 7/802 (0%)
Query: 1 MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
MA VGRGGQGDVGQRIRDEILVIQRNN CK+GMMEEWHQKLHNN+S DD+IICEALLNY+
Sbjct: 480 MALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNSSADDVIICEALLNYV 539
Query: 61 RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
R F+IDAYWQTL +GL+K++LASYDRPIVSEPRFR+D+KE L RDLTMYLKTLKAVHS
Sbjct: 540 RSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLIRDLTMYLKTLKAVHS 599
Query: 121 GADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSR 177
GADLESAI+T KGH+ + LS KL++ L +K + +E+ L+EKLVD+R
Sbjct: 600 GADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVREENTEPLIEKLVDAR 656
Query: 178 IELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCL 237
I+LHP L R RAKDLLFLDI+L S KTT+E+ L LNF++PPEI++ I ++LE+LCL
Sbjct: 657 IQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPPEIIYVICVVLENLCL 716
Query: 238 SVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVK 297
S+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA+R Q Y QP+ K
Sbjct: 717 SIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTIIQPTAK 776
Query: 298 YLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGF 357
YLG LL V+K+ ID FTEE++RA AVLS L+NRF+P LRK+ANLGCWQVIS + GF
Sbjct: 777 YLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIANLGCWQVISSADAYGF 836
Query: 358 ITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKV 417
+ VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M DVLSHVSIRARN+K+
Sbjct: 837 VVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRARNSKI 896
Query: 418 CFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRK 477
CFATCFDQN+L NL+ KEG+A+SI KST L+ISD ++S++S+ + S+PRG+ K K
Sbjct: 897 CFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRHIFISSVPRGVISKGK 956
Query: 478 IFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKD 537
F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+PFG FE +LS++ NKD
Sbjct: 957 KFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALPFGTFENILSDDSNKD 1016
Query: 538 IANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE-GWNL 596
+A +IS L +N GDL+KL+ IQEA+LQMSAP++L EL K+RS MP+ GDE GWN
Sbjct: 1017 VARRISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDESGWNR 1076
Query: 597 AWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNS 656
+W +IKKVWASKWNERA++SC+K L+HD +CMAVLIQE ICGDYAFVIHT NP+SGD+S
Sbjct: 1077 SWVAIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDYAFVIHTNNPVSGDSS 1136
Query: 657 EIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSN 716
EIYTEIVKGLGETLVGAYPGRAMSF+TKK NLKSP V YPSK IGLY KPSIIFRSDSN
Sbjct: 1137 EIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIFRSDSN 1196
Query: 717 GEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGY 776
EDLE AGAGLYDSVIM++ E+VV+DYSR+P++ DKSF+ +FS IAE G +IES+YG
Sbjct: 1197 NEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIESIYGC 1256
Query: 777 PQDIEGVLKDGLIYVVQARPQM 798
PQDIEGV+K G IY+VQARPQ+
Sbjct: 1257 PQDIEGVVKGGHIYIVQARPQV 1278
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1
PE=2 SV=1
Length = 1475
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/812 (58%), Positives = 603/812 (74%), Gaps = 14/812 (1%)
Query: 1 MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
++ VGRGG+GDVGQRIRDEILVIQRNN CK GMMEEWHQKLHNNTSPDD+IIC+AL++YI
Sbjct: 664 LSTVGRGGEGDVGQRIRDEILVIQRNNNCKGGMMEEWHQKLHNNTSPDDVIICQALIDYI 723
Query: 61 RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
+ F I AYW+TLN +G++K++L SYDR I SEP FR D K+ L RDL Y++TLKAVHS
Sbjct: 724 KSDFDISAYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKDGLLRDLGNYMRTLKAVHS 783
Query: 121 GADLESAIETCY----KGHNSVIS---DSFGSLSSKLRECLTFIKAHIHDESINQLMEKL 173
GADLESAI C +G ++ + +L S E L F+ H+ D ++ L+E L
Sbjct: 784 GADLESAITNCLGYRSEGQGFMVGVQINPIPNLPSGFPELLQFVSEHVEDRNVEALLEGL 843
Query: 174 VDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLE 233
+++R E+ P+L R KDLLFLDI+L S+++T +E+G ++LN + P +IM+F+SL+LE
Sbjct: 844 LEARQEIRPLLCKHNDRLKDLLFLDIALESSVRTAIEKGYEELNEAGPEKIMYFVSLILE 903
Query: 234 SLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQ 293
+L LS+ +NEDLIYC K W ++ WAL AK++LDR +L LA ++ YQK Q
Sbjct: 904 NLALSLDDNEDLIYCLKGWSNALSMSKSKSDNWALFAKSVLDRTRLALAGKADWYQKVLQ 963
Query: 294 PSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVE 353
PS +YLG LL V+K+ +D FTEE++RA S A LS+L+NR +PVLRK A+LG WQVISPVE
Sbjct: 964 PSAEYLGTLLSVDKWAVDIFTEEMIRAGSAAALSLLLNRLDPVLRKTASLGSWQVISPVE 1023
Query: 354 VCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRAR 413
V G++ V+EL+ +Q+K Y +PTI++A R+ GEEEIP G VAVLT DMPDVLSHVS+RAR
Sbjct: 1024 VFGYVAVVDELLAVQDKSYDQPTILLARRVKGEEEIPHGTVAVLTADMPDVLSHVSVRAR 1083
Query: 414 NNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRG-- 471
N KVCFATCFD NIL +L+ EGK + ++ S ++ S + S L SSSA G
Sbjct: 1084 NCKVCFATCFDPNILADLQSNEGKMLHLKPTSADIAYSVVEGSELQDSSSANLKEEDGPS 1143
Query: 472 --ITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETV 529
+ +K F G+YA++ ++FT ++VGAKS NI +L+ +VPSWI IPTSVA+PFG FE V
Sbjct: 1144 SSVALVKKQFAGRYAITSDEFTGELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKV 1203
Query: 530 LSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWP 589
LS++IN+ +A K+ L + + D S L+EI+E VLQM AP L+ ELK +M+SSGMPWP
Sbjct: 1204 LSDDINQAVAEKLQILKQKLGEEDHSALREIRETVLQMKAPNQLVQELKTEMKSSGMPWP 1263
Query: 590 GDEG---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIH 646
GDEG W AW +IKKVWASKWNERAF S R+ L+H+ LCMAVL+QE I DYAFVIH
Sbjct: 1264 GDEGEQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLCMAVLVQEIINADYAFVIH 1323
Query: 647 TKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 706
T NP SGD+SEIY E+VKGLGETLVGAYPGRA+SFV KKN+LKSP V YPSK IGL+ +
Sbjct: 1324 TTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKNDLKSPRVLGYPSKPIGLFIR 1383
Query: 707 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAET 766
SIIFRSDSNGEDLE YAGAGLYDSV M++ EKVVLDYS D ++ D FQ S+ S IA
Sbjct: 1384 RSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDHLITDGHFQQSILSSIARA 1443
Query: 767 GKIIESLYGYPQDIEGVLKDGLIYVVQARPQM 798
G IE L+G QDIEGV++DG IYVVQ RPQM
Sbjct: 1444 GCEIEELFGSAQDIEGVVRDGKIYVVQTRPQM 1475
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1
PE=1 SV=2
Length = 1464
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/810 (57%), Positives = 603/810 (74%), Gaps = 13/810 (1%)
Query: 1 MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
M+ VGRGG+GDVGQRIRDEILVIQRNN CK GMM+EWHQKLHNNTSPDD++IC+AL++YI
Sbjct: 656 MSTVGRGGEGDVGQRIRDEILVIQRNNDCKGGMMQEWHQKLHNNTSPDDVVICQALIDYI 715
Query: 61 RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
+ F + YW+TLN +G++K++L SYDR I SEP FR D K L RDL Y++TLKAVHS
Sbjct: 716 KSDFDLGVYWKTLNENGITKERLLSYDRAIHSEPNFRGDQKGGLLRDLGHYMRTLKAVHS 775
Query: 121 GADLESAIETC--YKGHN-----SVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKL 173
GADLESAI C YK V + L S ++ L F+ H+ D+++ L+E+L
Sbjct: 776 GADLESAIANCMGYKTEGEGFMVGVQINPVSGLPSGFQDLLHFVLDHVEDKNVETLLERL 835
Query: 174 VDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLE 233
+++R EL P+L R KDLLFLDI+L S ++T +ERG ++LN ++P +IM+FISL+LE
Sbjct: 836 LEAREELRPLLLKPNNRLKDLLFLDIALDSTVRTAVERGYEELNNANPEKIMYFISLVLE 895
Query: 234 SLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQ 293
+L LSV +NEDL+YC K W + D WAL AKA+LDR +L LA +++ Y Q
Sbjct: 896 NLALSVDDNEDLVYCLKGWNQALSMSNGGDNHWALFAKAVLDRTRLALASKAEWYHHLLQ 955
Query: 294 PSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVE 353
PS +YLG +LGV+++ ++ FTEE++RA S A LS L+NR +PVLRK ANLG WQ+ISPVE
Sbjct: 956 PSAEYLGSILGVDQWALNIFTEEIIRAGSAASLSSLLNRLDPVLRKTANLGSWQIISPVE 1015
Query: 354 VCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRAR 413
G++ V+EL+++QN++Y +PTI++A + GEEEIP G VA++TPDMPDVLSHVS+RAR
Sbjct: 1016 AVGYVVVVDELLSVQNEIYEKPTILVAKSVKGEEEIPDGAVALITPDMPDVLSHVSVRAR 1075
Query: 414 NNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGIT 473
N KVCFATCFD NIL +L+ KEG+ + ++ +++I S+++ L SSS L T
Sbjct: 1076 NGKVCFATCFDPNILADLQAKEGRILLLKPTPSDIIYSEVNEIELQ-SSSNLVEAETSAT 1134
Query: 474 FK--RKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLS 531
+ +K F G YA+S ++FT +MVGAKS NI +L+ +VPS + IPTSVA+PFG FE VLS
Sbjct: 1135 LRLVKKQFGGCYAISADEFTSEMVGAKSRNIAYLKGKVPSSVGIPTSVALPFGVFEKVLS 1194
Query: 532 ENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGD 591
++IN+ +A ++ L K ++ GD S L EI+ VL +SAP L+ ELK KM+ SGMPWPGD
Sbjct: 1195 DDINQGVAKELQILMKKLSEGDFSALGEIRTTVLDLSAPAQLVKELKEKMQGSGMPWPGD 1254
Query: 592 EG---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTK 648
EG W AW +IKKVWASKWNERA+ S RK L+HD LCMAVL+QE I DYAFVIHT
Sbjct: 1255 EGPKRWEQAWMAIKKVWASKWNERAYFSTRKVKLDHDYLCMAVLVQEIINADYAFVIHTT 1314
Query: 649 NPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPS 708
NP SGD+SEIY E+V+GLGETLVGAYPGRA+SF+ KK +L SP V YPSK IGL+ K S
Sbjct: 1315 NPSSGDDSEIYAEVVRGLGETLVGAYPGRALSFICKKKDLNSPQVLGYPSKPIGLFIKRS 1374
Query: 709 IIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGK 768
IIFRSDSNGEDLE YAGAGLYDSV M++ EKVV+DYS DP++ D +F+ ++ S IA G
Sbjct: 1375 IIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVIDYSSDPLITDGNFRQTILSNIARAGH 1434
Query: 769 IIESLYGYPQDIEGVLKDGLIYVVQARPQM 798
IE LYG PQDIEGV++DG IYVVQ RPQM
Sbjct: 1435 AIEELYGSPQDIEGVVRDGKIYVVQTRPQM 1464
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana
GN=GWD1 PE=1 SV=2
Length = 1399
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/809 (57%), Positives = 601/809 (74%), Gaps = 11/809 (1%)
Query: 1 MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
M+ VGRGG+GDVGQRIRDEILVIQR N CK G+MEEWHQKLHNNTSPDD++IC+AL++YI
Sbjct: 591 MSTVGRGGEGDVGQRIRDEILVIQRKNDCKGGIMEEWHQKLHNNTSPDDVVICQALMDYI 650
Query: 61 RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
+ F + YW+TLN +G++K++L SYDR I SEP FR + K+ L RDL Y++TLKAVHS
Sbjct: 651 KSDFDLSVYWKTLNDNGITKERLLSYDRAIHSEPNFRGEQKDGLLRDLGHYMRTLKAVHS 710
Query: 121 GADLESAIETCYKGHN-------SVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKL 173
GADLESAI+ C + V + L S + L F+ H+ ++++ L+E L
Sbjct: 711 GADLESAIQNCMGYQDDGEGFMVGVQINPVSGLPSGYPDLLRFVLEHVEEKNVEPLLEGL 770
Query: 174 VDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLE 233
+++R EL P+L + R KDLLFLD++L S ++T +ERG + LN + P +IM+FISL+LE
Sbjct: 771 LEARQELRPLLLKSHDRLKDLLFLDLALDSTVRTAIERGYEQLNDAGPEKIMYFISLVLE 830
Query: 234 SLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQ 293
+L LS +NEDLIYC K W + ++ WAL AK++LDR +L LA +++ Y + Q
Sbjct: 831 NLALSSDDNEDLIYCLKGWQFALDMCKSKKDHWALYAKSVLDRSRLALASKAERYLEILQ 890
Query: 294 PSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVE 353
PS +YLG LGV++ + FTEE++RA S A LS L+NR +PVLRK ANLG WQVISPVE
Sbjct: 891 PSAEYLGSCLGVDQSAVSIFTEEIIRAGSAAALSSLVNRLDPVLRKTANLGSWQVISPVE 950
Query: 354 VCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRAR 413
V G++ V+EL+T+QNK Y RPTII+A+R+ GEEEIP G VAVLTPDMPDVLSHVS+RAR
Sbjct: 951 VVGYVIVVDELLTVQNKTYDRPTIIVANRVRGEEEIPDGAVAVLTPDMPDVLSHVSVRAR 1010
Query: 414 NNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSL-SSSALPSIPRGI 472
N K+CFATCFD IL +L+ K+GK +S++ S +++ +++ S LS SS L P I
Sbjct: 1011 NGKICFATCFDSGILSDLQGKDGKLLSLQPTSADVVYKEVNDSELSSPSSDNLEDAPPSI 1070
Query: 473 TFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSE 532
+ +K F G+YA+S E+FT D+VGAKS NI +L+ +VPSW+ IPTSVA+PFG FE V+SE
Sbjct: 1071 SLVKKQFAGRYAISSEEFTSDLVGAKSRNIGYLKGKVPSWVGIPTSVALPFGVFEKVISE 1130
Query: 533 NINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE 592
N+ + +K+ L K ++ GD L+EI++ +L + AP L+ ELK+ M+SS MPWPGDE
Sbjct: 1131 KANQAVNDKLLVLKKTLDEGDQGALKEIRQTLLGLVAPPELVEELKSTMKSSDMPWPGDE 1190
Query: 593 G---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKN 649
G W AW +IKKVWASKWNERA+ S RK L+HD LCMAVL+QE I DYAFVIHT N
Sbjct: 1191 GEQRWEQAWAAIKKVWASKWNERAYFSTRKVKLDHDYLCMAVLVQEVINADYAFVIHTTN 1250
Query: 650 PLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSI 709
P SGD+SEIY E+VKGLGETLVGAYPGR++SF+ KKNNL SP+V YPSK IGL+ + SI
Sbjct: 1251 PSSGDSSEIYAEVVKGLGETLVGAYPGRSLSFICKKNNLDSPLVLGYPSKPIGLFIRRSI 1310
Query: 710 IFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKI 769
IFRSDSNGEDLE YAGAGLYDSV M++ ++VVLDY+ DP++ D SFQ V S IA G
Sbjct: 1311 IFRSDSNGEDLEGYAGAGLYDSVPMDEEDQVVLDYTTDPLITDLSFQKKVLSDIARAGDA 1370
Query: 770 IESLYGYPQDIEGVLKDGLIYVVQARPQM 798
IE LYG QDIEGV++DG +YVVQ RPQ+
Sbjct: 1371 IEKLYGTAQDIEGVIRDGKLYVVQTRPQV 1399
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana
GN=GWD3 PE=1 SV=1
Length = 1196
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 216/879 (24%), Positives = 366/879 (41%), Gaps = 145/879 (16%)
Query: 15 RIRDEILVIQRNN---GCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCG-------- 63
RIRD + RN+ K + KLH N P+D+I EA+L I
Sbjct: 365 RIRD---IAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEAMLQRITETPGKYSGDF 421
Query: 64 ---FKI--DAYWQTLNCHGLSKQ----KLASYDRPIVS-EPRFRADAKESLTRDLTMYLK 113
FKI + N L++Q K++ DR + + F + + + + L+
Sbjct: 422 VEQFKIFHNELKDFFNAGSLTEQLDSMKISMDDRGLSALNLFFECKKRLDTSGESSNVLE 481
Query: 114 TLKAVHSGADL-ESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEK 172
+K +HS A L E+ I+ G + D+ ++ K R C ++ + L+ +
Sbjct: 482 LIKTMHSLASLRETIIKELNSGLRNDAPDTAIAMRQKWRLCEIGLEDYFF-----VLLSR 536
Query: 173 LVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLL 232
+++ +G A AKD+ +++ + + G+ + S
Sbjct: 537 FLNAL----ETMGGADQLAKDVGSRNVASWNDPLDALVLGVHQVGLSG----------WK 582
Query: 233 ESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKF 292
+ CL++ NE L + +D E WA++ KA LDR + + AE S + F
Sbjct: 583 QEECLAI-GNELLAWRERDLLE-KEGEEDGKTIWAMRLKATLDRARRLTAEYSDLLLQIF 640
Query: 293 QPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPV 352
P+V+ LG LG+ + + +TE +RA +S L +R W V+ P
Sbjct: 641 PPNVEILGKALGIPENSVKTYTEAEIRAGIIFQISKLCTVLLKAVRNSLGSEGWDVVVPG 700
Query: 353 EVCGFITSVNELITLQ-NKVYRRPTIIIASRITGEEEIPV--GVVA--VLTPDMPDVLSH 407
G + V ++ P I++ ++ G+EE+ G +A +L ++P LSH
Sbjct: 701 STSGTLVQVESIVPGSLPATSGGPIILLVNKADGDEEVSAANGNIAGVMLLQELPH-LSH 759
Query: 408 VSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKST--NLIISDISSSNLSLSSSAL 465
+ +RAR K+ F TC D + + ++R GK V + + NLI+S S S SSA
Sbjct: 760 LGVRARQEKIVFVTCDDDDKVADIRRLVGKFVRLEASPSHVNLILSTEGRSRTS-KSSAT 818
Query: 466 PSIPRGITFKRKIFRGKYAVSVEDFTPDMV----------------------------GA 497
+ K+K + ++ E+ P G+
Sbjct: 819 KKTDKNSLSKKKTDKKSLSIDDEESKPGSSSSNSLLYSSKDIPSGGIIALADADVPTSGS 878
Query: 498 KSCNIKFL------------RERVPSWIKIPTSVAIPFGAFETVLSENINKD-IANKISR 544
KS L VP+ K+PT V IPFG+ E L +N +++ A+ + +
Sbjct: 879 KSAACGLLASLAEASSKVHSEHGVPASFKVPTGVVIPFGSMELALKQNNSEEKFASLLEK 938
Query: 545 LYKF-INGGDLSKL-QEIQEAVLQMSAPLSLIYELKNK--------MRSS-------GMP 587
L GG+L + +I E + + P I + +RSS GM
Sbjct: 939 LETARPEGGELDDICDQIHEVMKTLQVPKETINSISKAFLKDARLIVRSSANVEDLAGMS 998
Query: 588 WPG--DEGWNLA-------WRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETIC 638
G + N++ S+ +VWAS + RA +S R A ++ MAVL+QE +
Sbjct: 999 AAGLYESIPNVSPSDPLVFSDSVCQVWASLYTRRAVLSRRAAGVSQREASMAVLVQEMLS 1058
Query: 639 GDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPS 698
D +FV+HT +P D++ + EI GLGETL G +
Sbjct: 1059 PDLSFVLHTVSPADPDSNLVEAEIAPGLGETLASGTRGTPWRLAS--------------G 1104
Query: 699 KLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTS 758
KL G+ ++ F + S E+L +G G D + ++ +DYS+ + D F+
Sbjct: 1105 KLDGIV--QTLAFANFS--EEL-LVSGTGPADGKYV----RLTVDYSKKRLTVDSVFRQQ 1155
Query: 759 VFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 797
+ ++ G +E +G QD+EG L +Y+VQ+RPQ
Sbjct: 1156 LGQRLGSVGFFLERNFGCAQDVEGCLVGEDVYIVQSRPQ 1194
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=GWD3 PE=3 SV=2
Length = 1206
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 212/890 (23%), Positives = 373/890 (41%), Gaps = 168/890 (18%)
Query: 15 RIRDEILVIQRNN---GCKTGMMEEWHQKLHNNTSPDDIIICEALL-------------- 57
RIRD + RN+ K + KLH N P+D+I E +L
Sbjct: 377 RIRD---IAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETF 433
Query: 58 ------------NYIRCGF---KIDAYWQTLNCHGLSKQKLASYDRPIVSEPRF--RADA 100
++ G ++++ ++LN GL + L+S+ V R + D
Sbjct: 434 VEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGL--EVLSSF----VETKRSLDQVDH 487
Query: 101 KESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAH 160
E L ++ T+ + + + S + L S + KG S + + + +R+ +
Sbjct: 488 AEDLDKNDTIQI-LMTTLQSLSSLRSVL---MKGLESGLRNDAPDNAIAMRQKWRLCEIS 543
Query: 161 IHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSH 220
+ D S L+ + +++ L A+ A++ D +L + + G+ ++FS
Sbjct: 544 LEDYSF-VLLSRFINTLEALGGSASLAKDVARNTTLWDTTLDALVI-----GINQVSFSG 597
Query: 221 PPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQ--WALQAKAILDRLQ 278
C+++ NE L + K +SES D + W+L+ KA LDR +
Sbjct: 598 ----------WKTDECIAI-GNEILSWKQKG---LSESEGCEDGKYIWSLRLKATLDRAR 643
Query: 279 LVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLR 338
+ E S+ F V +G LG+ + +TE +RA +S L + +R
Sbjct: 644 RLTEEYSEALLSIFPEKVMVIGKALGIPDNSVRTYTEAEIRAGIVFQVSKLCTVLQKAIR 703
Query: 339 KVANLGCWQVISPVEVCGFITSVNELI--TLQNKVYRRPTIIIASRITGEEEIPVG---- 392
+V W V+ P G + V ++ +L + V + P ++I + G+EE+
Sbjct: 704 EVLGSTGWDVLVPGVAHGTLMRVERILPGSLPSSV-KEPVVLIVDKADGDEEVKAAGDNI 762
Query: 393 VVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISD 452
V +L ++P LSH+ +RAR V F TC + + ++ L EGK + + S N+ +S
Sbjct: 763 VGVILLQELPH-LSHLGVRARQENVVFVTCEYDDTVTDVYLLEGKYIRLEASSINVNLSI 821
Query: 453 ISSSN-----LSLSSSALP---------SIPRGITFKRKIFRGK---------YAVSVED 489
+S N +S+ P S+P I ++ + K A+ + +
Sbjct: 822 VSEKNDNAVSTEPNSTGNPFQQKLQNEFSLPSDIEMPLQMSKQKSKSGVNGSFAALELSE 881
Query: 490 FTPDMVGAKSCNIKFLR------------ERVPSWIKIPTSVAIPFGAFETVLSENINKD 537
+ + GAK+ + L + VP+ ++P+ IPFG+ E L + +
Sbjct: 882 ASVESAGAKAAACRTLSVLASLSNKVYSDQGVPAAFRVPSGAVIPFGSMEDALKK--SGS 939
Query: 538 IANKISRLYKF----INGGDLSKLQ-EIQEAVLQMSAPLSLIYELKN--------KMRSS 584
+ + S L K + G++ L E+Q + +S P I LK +RSS
Sbjct: 940 LESFTSLLEKIETAKVENGEVDSLALELQAIISHLSPPEETIIFLKRIFPQDVRLIVRSS 999
Query: 585 -------GMPWPG--DEGWNLAW-------RSIKKVWASKWNERAFISCRKANLNHDNLC 628
GM G D N++ ++ KVWAS + RA +S R A + +
Sbjct: 1000 ANVEDLAGMSAAGLYDSIPNVSLMDPCAFGAAVGKVWASLYTRRAILSRRAAGVYQRDAT 1059
Query: 629 MAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNL 688
MAVL+QE + D +FV+HT P D + E+ GLGETL A R + N
Sbjct: 1060 MAVLVQEILQPDLSFVLHTVCPADHDPKVVQAEVAPGLGETL--ASGTRGTPWRLSCNKF 1117
Query: 689 KSPIVTCYPSKLIGLYGKPSIIFRSD-SNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRD 747
+ T S + + ++ S +NGE + ++ +DYS+
Sbjct: 1118 DGKVATLAFSN----FSEEMVVHNSGPANGEVI------------------RLTVDYSKK 1155
Query: 748 PMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 797
P+ D +F+ ++A G+ +E +G QD+EG L I++VQ+RPQ
Sbjct: 1156 PLSVDTTFRKQFGQRLAAIGQYLEQKFGSAQDVEGCLVGKDIFIVQSRPQ 1205
>sp|O57830|PPSA_PYRHO Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=ppsA PE=3 SV=1
Length = 821
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+KK WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 189 VKKCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 248
Query: 661 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 718
GLGE +V GA ++ +K K K+I K ++ R+ G+
Sbjct: 249 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGKG 298
Query: 719 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 774
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 299 TVQVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEEHY 337
Query: 775 GYPQDIEGVL--KDGLIYVVQARP 796
G+PQDIE DG +Y+VQ+RP
Sbjct: 338 GWPQDIEWAYDKDDGKLYIVQSRP 361
>sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=ppsA PE=3 SV=1
Length = 753
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 74/337 (21%)
Query: 494 MVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGG 552
+VG K N+ + LR +P +P + F + + IA KI L + ++
Sbjct: 16 LVGGKGANLGELLRAEIP----VPDGFVVDARTFREFIQKT---GIAEKIYSLLRELDVE 68
Query: 553 DLSKL----QEIQEAVLQMSAPLSLIYELKNKMR-------------------SSGMP-- 587
D KL +EI+E + + P + E++ R + +P
Sbjct: 69 DTEKLDAVSREIREIIEKTEMPEDIEREIREAYRKLCEEEGKEVYVAVRSSATAEDLPDA 128
Query: 588 -WPGDE-------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICG 639
+ G + G + +KK W S + RA + H+++ +AV++Q+ +
Sbjct: 129 SFAGQQETYLNVVGEDEVVEKVKKCWGSLFTPRAIYYRVQKGFRHEDVSIAVVVQKMVNS 188
Query: 640 DYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSK 699
+ + V+ T +P+SG+ I E V GLGE +V VT + +
Sbjct: 189 EKSGVMFTSHPVSGEKKCI-IEAVFGLGEAIVSG-------LVTPDTYVYDRVKRKIEEV 240
Query: 700 LIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSV 759
IG K ++ R D +E PEK + + ++ D+ +
Sbjct: 241 KIG--EKKFMLTRKDGKTVKVEL-------------PPEK-----ANERVLSDEEIE--- 277
Query: 760 FSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP 796
K+ G++IE YG PQD+E ++ G IY+VQ+RP
Sbjct: 278 --KLVTLGELIEDHYGKPQDVEWAIEGGKIYIVQSRP 312
>sp|Q9V2H7|PPSA_PYRAB Probable phosphoenolpyruvate synthase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=ppsA PE=3 SV=1
Length = 819
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+K+ WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 186 VKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 245
Query: 661 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 718
GLGE +V GA ++ +K K K+I K ++ R+ G+
Sbjct: 246 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGKG 295
Query: 719 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 774
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 296 TVTVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEEHY 334
Query: 775 GYPQDIEGVL--KDGLIYVVQARP 796
G+PQDIE DG +Y+VQ+RP
Sbjct: 335 GWPQDIEWAYDKDDGKLYIVQSRP 358
>sp|O27190|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=ppsA PE=3 SV=1
Length = 684
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+++ WAS + RA + N +H + +AV++QE + + A V+ T +P +G++ I
Sbjct: 181 VRRCWASLFEARAIFYREENNFDHSKVYIAVVVQEMVDAEKAGVMFTVHPSTGEDR-ILI 239
Query: 661 EIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL-YGKPSIIFRSDSNGED 719
E GLGE +V +V K KL+ G+ +I+F + +G
Sbjct: 240 EGSWGLGEAVVSGSVTPDTYWVDKGT-----------GKLLEFTVGEKNIMF-TREDGRT 287
Query: 720 LEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQD 779
++K L + +++D E + +AE G+ I+ YG PQD
Sbjct: 288 VKKEVPPELRNKRVLSDGE---------------------IAALAEMGRRIQDHYGSPQD 326
Query: 780 IEGVLKDGLIYVVQARP 796
E + DG +Y++Q+RP
Sbjct: 327 TEWAIMDGDVYMLQSRP 343
>sp|P42850|PPSA_PYRFU Phosphoenolpyruvate synthase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=ppsA PE=1 SV=3
Length = 817
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+K+ WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 186 VKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 245
Query: 661 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 718
GLGE +V GA ++ +K K K+I K ++ R+ G
Sbjct: 246 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGRG 295
Query: 719 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 774
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 296 TVMVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEDHY 334
Query: 775 GYPQDIEGVL--KDGLIYVVQARP 796
G+PQDIE DG +Y+VQ+RP
Sbjct: 335 GWPQDIEWAYDKDDGKLYIVQSRP 358
>sp|Q9YEC5|PPSA_AERPE Phosphoenolpyruvate synthase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=ppsA PE=3 SV=2
Length = 820
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+K WAS W RA N++H+ MAV++Q+ + + V+ T +P++G+ +I
Sbjct: 155 VKTAWASLWTARALSYRDSLNIDHETALMAVVVQKMVSSRSSGVMFTIHPVTGEEDKIVI 214
Query: 661 EIVKGLGETLVGA--YPGRAMSFVTKKNNLK 689
E + GLGE +VG P R FV K++L+
Sbjct: 215 ESIWGLGEYIVGGKVTPDR---FVVSKSDLE 242
>sp|O34309|PPS_BACSU Putative phosphoenolpyruvate synthase OS=Bacillus subtilis (strain
168) GN=pps PE=3 SV=1
Length = 866
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 593 GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLS 652
G + + I K WAS + +RA I + +H + ++V++Q + + ++ T +P++
Sbjct: 141 GVDAILQHISKCWASLFTDRAVIYRMQNGFDHSQVYLSVIVQRMVFPQASGILFTADPIT 200
Query: 653 GDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFR 712
+ + + GLGE LV V + I T K + +YG+
Sbjct: 201 SNRKVLSIDAGFGLGEALVSGLVSADCFKVQDGQIIDKRIAT----KKMAIYGRKE---- 252
Query: 713 SDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIES 772
G I +D +K ++ ++A G+ IE+
Sbjct: 253 -------------GGTETQQIDSDQQKA------------QTLTDEQILQLARIGRQIEA 287
Query: 773 LYGYPQDIEGVLKDGLIYVVQARP 796
+G PQDIE L Y+VQ+RP
Sbjct: 288 HFGQPQDIEWCLARDTFYIVQSRP 311
>sp|O34796|YVKC_BACSU Uncharacterized phosphotransferase YvkC OS=Bacillus subtilis
(strain 168) GN=yvkC PE=3 SV=1
Length = 831
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 37/198 (18%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+K+ WAS ++ R +K N M +++Q I + + VI ++NP++ D+ E+
Sbjct: 127 VKECWASFFSGRVSSYKKKMNNQIAEPLMGIVVQGLIDSEMSGVIFSRNPVTHDDRELLI 186
Query: 661 EIVKGLGETLVGA--YPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE 718
GLGE +V P +F+ K++ + + G I S + G
Sbjct: 187 SASYGLGEAVVSGNVTPD---TFIVNKSSFE----------IQKEIGAKEIYMESAAEG- 232
Query: 719 DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQ 778
EK + + D E+V+ ++AE K E LYGYP
Sbjct: 233 IAEKETSEDMRSRFCLTD-EQVI--------------------ELAEITKKTEDLYGYPV 271
Query: 779 DIEGVLKDGLIYVVQARP 796
DIE + D IY++QARP
Sbjct: 272 DIEFGIADHQIYLLQARP 289
>sp|Q57962|PPSA_METJA Probable phosphoenolpyruvate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=ppsA PE=3 SV=1
Length = 1188
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 599 RSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEI 658
+ ++K ++S + RA + +H + +A ++Q+ + + A V+ T NP+S + E+
Sbjct: 161 KYVQKCFSSLFTPRAIFYREQQGFDHFKVALAAVVQKLVNAEKAGVMFTVNPISENYDEL 220
Query: 659 YTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE 718
E GLGE +V V KK IV + + +F D GE
Sbjct: 221 VIEAAWGLGEGVVSGSVSPDTYIVNKKT---LEIVDKH-------IARKETMFVKDEKGE 270
Query: 719 DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQ 778
+ ++ P D M + ++A+ G IE YG P
Sbjct: 271 ------------TKVVEVP---------DDMKEKQVLSDDEIKELAKIGLNIEKHYGKPM 309
Query: 779 DIEGVLKDGLIYVVQARP 796
D+E + G Y++QARP
Sbjct: 310 DVEWAYEKGKFYMLQARP 327
>sp|O83026|PPSA_DEIRA Phosphoenolpyruvate synthase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=ppsA PE=3 SV=2
Length = 780
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 67/341 (19%)
Query: 493 DMVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFING 551
++VG K+ +I + ++ + +++P A AF L EN I KI+ + ++
Sbjct: 16 EIVGGKNASIGEMIQGLAQADVRVPGGFATTADAFRLFLREN---QIEEKINAKLQALDV 72
Query: 552 GDLSKL----QEIQEAVLQMSAPLSL---IYELKNKM--------RSSG----MP---WP 589
D++ L +EI+ V + P +L I + +M RSS +P +
Sbjct: 73 NDVNALVAAGKEIRGWVEEARLPAALEDAIRQAYGEMGDDPDVAVRSSATAEDLPEASFA 132
Query: 590 GDEGWNLAWRSI-------KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYA 642
G + L R I K V+AS +N+RA N H + ++ +Q + D
Sbjct: 133 GQQETFLNVRGIEEVLNHVKLVFASLYNDRAISYRVHHNFEHSEVALSAGVQRMVRTDLG 192
Query: 643 F--VIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKL 700
V T + SG ++ GLGE +V FV K P +
Sbjct: 193 VSGVAFTLDTESGFRDAVFVTSSYGLGEMVVQGAVNPDEFFVYK------PALE------ 240
Query: 701 IGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVF 760
GK +++ R+ + + YA AG +V +++ E+ S D +
Sbjct: 241 ---QGKKAVLRRTRGSKQKKMIYAEAGGVKTVDVDEAEQRAFSLSDDDL----------- 286
Query: 761 SKIAETGKIIESLYGYPQDIE-GVLKDG---LIYVVQARPQ 797
+++A IE YG P DIE G KDG IY++QARP+
Sbjct: 287 TELARQCVTIEKHYGRPMDIEWG--KDGRDVQIYILQARPE 325
>sp|P46893|PPSA_STAMF Probable phosphoenolpyruvate synthase OS=Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1) GN=ppsA PE=1 SV=1
Length = 834
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 601 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 660
+K+ WAS + RA + H+ M+V +Q+ + A V+ T +P++GD +
Sbjct: 161 VKRCWASLFTSRAVFYRVAQGIPHEKSLMSVTVQKMVNSRTAGVMFTLHPVTGDEKVVVI 220
Query: 661 EIVKGLGETLVGA--------YPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFR 712
E GLGE++VG + + V +K + K+ + P K GK ++ R
Sbjct: 221 EASWGLGESVVGGKVTPDEWVVDKQTLQIVDQKIHHKTLAIVFDPKK-----GK-NVEIR 274
Query: 713 SDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIES 772
D N + G + V P+K L + ++AE +IE
Sbjct: 275 WDENKQAWVSEEGPVDIEMVKHFHPDKPAL-------------KEEEVKRLAELALLIEK 321
Query: 773 LYGYPQDIEGVLKDGL-----IYVVQAR 795
YG DIE + + +++VQAR
Sbjct: 322 HYGRHMDIEWAVDYDIPFPDNVFIVQAR 349
>sp|Q8G7X1|THIEC_BIFLO Thiamine biosynthesis bifunctional protein ThiEC OS=Bifidobacterium
longum (strain NCC 2705) GN=thiE/thiC PE=3 SV=1
Length = 917
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 625 DNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTK 684
D + M + +++ +C + F +T PL+ D + Y I +G T +G Y + +VT
Sbjct: 689 DTVRMNIELEKAVCHNAPF--YTLGPLTTDTAPGYDHITSAIGATEIGRYGTAMLCYVTP 746
Query: 685 KNNLKSP 691
K +L P
Sbjct: 747 KEHLGLP 753
>sp|Q98AZ3|THIC_RHILO Phosphomethylpyrimidine synthase OS=Rhizobium loti (strain
MAFF303099) GN=thiC PE=3 SV=1
Length = 619
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 431 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 486
>sp|C4LD10|ISPH_TOLAT 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Tolumonas
auensis (strain DSM 9187 / TA4) GN=ispH PE=3 SV=1
Length = 310
Score = 36.2 bits (82), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 700 LIGLYGKPSI---IFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQ 756
LIG G P + + + D NG + A DS+ + PEKV SF
Sbjct: 118 LIGHKGHPEVEGTLGQYDENGTGMYLVEDANQVDSLPVQQPEKV-------------SFV 164
Query: 757 TSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQAR 795
T + ET II++L + I+G KD + Y Q R
Sbjct: 165 TQTTLSVDETRDIIDALREHFPAIQGPRKDDICYATQNR 203
>sp|B9JMY1|THIC_AGRRK Phosphomethylpyrimidine synthase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=thiC PE=3 SV=1
Length = 608
Score = 36.2 bits (82), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|Q92TI9|THIC_RHIME Phosphomethylpyrimidine synthase OS=Rhizobium meliloti (strain
1021) GN=thiC PE=3 SV=1
Length = 611
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 428 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 483
>sp|Q2K206|THIC_RHIEC Phosphomethylpyrimidine synthase OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=thiC PE=3 SV=1
Length = 610
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLEVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|B9K253|THIC_AGRVS Phosphomethylpyrimidine synthase OS=Agrobacterium vitis (strain S4
/ ATCC BAA-846) GN=thiC PE=3 SV=1
Length = 610
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 427 QLKTCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 482
>sp|Q028Z8|THIC_SOLUE Phosphomethylpyrimidine synthase OS=Solibacter usitatus (strain
Ellin6076) GN=thiC PE=3 SV=1
Length = 461
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 625 DNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTK 684
D + M V+ ++ +C + F +T PL D + Y I +G ++G Y + +VT
Sbjct: 281 DQIEMQVIKEKELCFEAPF--YTLGPLVTDIAPGYDHITSAIGAAMIGWYGASMLCYVTP 338
Query: 685 KNNLKSP 691
K +L P
Sbjct: 339 KEHLGLP 345
>sp|Q3J7C1|THIC_NITOC Phosphomethylpyrimidine synthase OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=thiC PE=3 SV=1
Length = 624
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 440 QLACCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 495
>sp|Q1GQJ3|THIC_SPHAL Phosphomethylpyrimidine synthase OS=Sphingopyxis alaskensis (strain
DSM 13593 / LMG 18877 / RB2256) GN=thiC PE=3 SV=1
Length = 630
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 435 QLEACGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 490
>sp|Q21NU6|THIC_SACD2 Phosphomethylpyrimidine synthase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=thiC PE=3 SV=1
Length = 638
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 638 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 448 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLP 499
>sp|C5BTK7|THIC_TERTT Phosphomethylpyrimidine synthase OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=thiC PE=3 SV=1
Length = 639
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 638 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 446 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLP 497
>sp|Q82FI7|THIC_STRAW Phosphomethylpyrimidine synthase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=thiC PE=3 SV=1
Length = 601
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 555 SKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKV--WASKWNER 612
S L E E + ++ A + Y L + +R + DE R++ ++ A ++N +
Sbjct: 339 SFLYENFEELCEILAAYDVTYSLGDGLRPGSIADANDEAQFAELRTLGELNRIAKRFNVQ 398
Query: 613 AFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVG 672
I ++ + + +Q+ IC + F +T PL+ D + Y I G+G ++
Sbjct: 399 TMIEG-PGHVPMHKIKENIDLQQEICDEAPF--YTLGPLTTDVAPAYDHITSGIGAAMIA 455
Query: 673 AYPGRAMSFVTKKNNLKSP 691
+ + +VT K +L P
Sbjct: 456 WWGTAMLCYVTPKEHLGLP 474
>sp|Q1D4L3|THIC_MYXXD Phosphomethylpyrimidine synthase OS=Myxococcus xanthus (strain DK
1622) GN=thiC PE=3 SV=1
Length = 624
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 632 LIQE------TICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKK 685
LIQE +CG+ F +T PL+ D + Y G+G ++G + + +VT K
Sbjct: 434 LIQENMTKQLAVCGEAPF--YTLGPLTTDIAPGYDHFTSGIGAAMIGWFGTAMLCYVTPK 491
Query: 686 NNLKSP 691
+L P
Sbjct: 492 EHLGLP 497
>sp|Q8UCC9|THIC_AGRT5 Phosphomethylpyrimidine synthase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=thiC PE=3 SV=2
Length = 607
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 634 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
Q CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLKTCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|Q9X9U0|THIC_STRCO Phosphomethylpyrimidine synthase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=thiC PE=3 SV=1
Length = 612
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 633 IQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
+Q+ IC + F +T PL+ D + Y I G+G ++ + + +VT K +L P
Sbjct: 423 LQQEICDEAPF--YTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLP 479
>sp|Q9UTR7|MCP3_SCHPO Meiotic coiled-coil protein 3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp3 PE=1 SV=1
Length = 952
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 135 HNSVISDSFGSLSSK--LRECLTFI----------------KAHIHDESINQLMEKLVDS 176
HN+ + D F S +++ L++ L+ + K I SIN++ + D
Sbjct: 268 HNNALEDKFNSEAARQLLQKSLSIVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDL 327
Query: 177 RIELHPVLGTARGRAKDLLFLDISLASAIKTTM--ERGLKDLNFSHPPEIMFFISLLLES 234
++E + + + K LL + SL A++T E+ L+++N ++ E ++
Sbjct: 328 KLETEKL----QDQIKALLERNQSLQEALETVKNDEKNLREMNANYETE--------MKE 375
Query: 235 LCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAE-RSQTYQKKFQ 293
+ N E LI D +R E + + +L+ KA L Q ++E R YQ++ Q
Sbjct: 376 ARQKLNNKEALISHYDDDFRAKE-LKISRLSESLREKAGLLEFQSSVSEQRDLLYQEQIQ 434
Query: 294 PSVKYLGCLLGVEKYVIDNFTE 315
S+K + + +Y+++ E
Sbjct: 435 SSIKDMENVFRKNEYLMEELNE 456
>sp|Q3SFG3|THIC_THIDA Phosphomethylpyrimidine synthase OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=thiC PE=3 SV=1
Length = 652
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 633 IQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
IQ C + F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 467 IQLESCSEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 523
>sp|P03916|NU5M_PANPA NADH-ubiquinone oxidoreductase chain 5 OS=Pan paniscus GN=MT-ND5
PE=3 SV=2
Length = 603
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 621 NLNHDNLCMAVLIQE-TICGDYAFVIHTKNPLSGDNSEIYTEI---VKGLGETLVGAYPG 676
N+N +N + I+ TI +A T N L S++ + + L T +G
Sbjct: 442 NINENNPTLLNPIKRLTIGSLFAGFFITNNILPMSTSQMTIPLYLKLTALSVTFLGLLTA 501
Query: 677 RAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 713
++++T K +KSP T Y S ++G Y P+I+ RS
Sbjct: 502 LDLNYLTNKLKMKSPPYTFYFSNMLGFY--PNIMHRS 536
>sp|Q68WP2|PPDK_RICTY Pyruvate, phosphate dikinase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=ppdK PE=3 SV=1
Length = 880
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
Query: 700 LIGLYGKPS---IIF-RSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPM---VGD 752
+ G GK S ++F RS S GE L+ ++N + ++ +R PM D
Sbjct: 246 VFGNLGKTSATGVVFTRSPSTGEK-------KLFGEFLINAQGEDIVSGTRTPMPIIAND 298
Query: 753 ----KSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQAR 795
++ VF+K+++ K +E Y QDIE +++ +Y++Q R
Sbjct: 299 SNSMQAMMPEVFTKLSQIAKKLEEHYLDMQDIEFTIENNKLYILQTR 345
>sp|Q35648|NU5M_PANTR NADH-ubiquinone oxidoreductase chain 5 OS=Pan troglodytes GN=MT-ND5
PE=3 SV=1
Length = 603
Score = 33.5 bits (75), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 621 NLNHDNLCMAVLIQE-TICGDYAFVIHTKNPLSGDNSEIYTEI---VKGLGETLVGAYPG 676
N+N +N + I+ TI +A + T N L ++ + + LG T +G
Sbjct: 442 NINENNPTLLNPIKRLTIGSLFAGFLITNNILPMSTPQVTIPLYLKLTALGVTSLGLLTA 501
Query: 677 RAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 713
++++T K +KSP+ T + S ++G Y P+I+ RS
Sbjct: 502 LDLNYLTSKLKMKSPLYTFHFSNMLGFY--PNIMHRS 536
>sp|B1VPA3|THIC_STRGG Phosphomethylpyrimidine synthase OS=Streptomyces griseus subsp.
griseus (strain JCM 4626 / NBRC 13350) GN=thiC PE=3 SV=1
Length = 606
Score = 33.5 bits (75), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 633 IQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 691
+Q+ IC + F +T PL+ D + Y I G+G ++ + + +VT K +L P
Sbjct: 423 LQQEICEEAPF--YTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLP 479
>sp|P03915|NU5M_HUMAN NADH-ubiquinone oxidoreductase chain 5 OS=Homo sapiens GN=MT-ND5
PE=1 SV=2
Length = 603
Score = 33.1 bits (74), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 663 VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 713
+ L T +G ++++T K +KSP+ T Y S ++G Y PSI R+
Sbjct: 488 LTALAVTFLGLLTALDLNYLTNKLKMKSPLCTFYFSNMLGFY--PSITHRT 536
>sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=has1
PE=3 SV=1
Length = 609
Score = 33.1 bits (74), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 175 DSRIELHPVLGTARG---RAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLL 231
D+R +H V TARG R + L+FL S +K E + + F P + + +
Sbjct: 455 DTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKEARVPVVEFDFPAKKIVNVQSQ 514
Query: 232 LESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERS 285
LE L + N L KD YR SY A +L++ + +L LV +S
Sbjct: 515 LEKL---ISQNYYLNKSAKDGYR---SYLQAYASHSLRSVFDVHKLDLVKVAKS 562
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 289,802,824
Number of Sequences: 539616
Number of extensions: 12094383
Number of successful extensions: 30194
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 30135
Number of HSP's gapped (non-prelim): 69
length of query: 798
length of database: 191,569,459
effective HSP length: 126
effective length of query: 672
effective length of database: 123,577,843
effective search space: 83044310496
effective search space used: 83044310496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)