BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>003758
MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS
VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD
YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG
FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF
FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP
SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTK
NITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARK
SERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDD
VDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAE
KVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQM
YGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSC
LLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYF
NFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKE
KMFDRLTKGYRQKTLGG

High Scoring Gene Products

Symbol, full name Information P value
AT5G04480 protein from Arabidopsis thaliana 6.6e-255
AT4G01210 protein from Arabidopsis thaliana 7.1e-141

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  003758
        (797 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2184437 - symbol:AT5G04480 species:3702 "Arabi...  2454  6.6e-255  1
TAIR|locus:2124953 - symbol:AT4G01210 species:3702 "Arabi...   873  7.1e-141  2


>TAIR|locus:2184437 [details] [associations]
            symbol:AT5G04480 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
            network" evidence=IDA] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISM] InterPro:IPR001296
            Pfam:PF00534 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009058 GO:GO:0005768 GO:GO:0016740 GO:GO:0005802
            EMBL:AY052353 EMBL:BT001086 IPI:IPI00538612 RefSeq:NP_568137.1
            UniGene:At.26496 ProteinModelPortal:Q940Y7 PaxDb:Q940Y7
            PRIDE:Q940Y7 EnsemblPlants:AT5G04480.1 GeneID:830327
            KEGG:ath:AT5G04480 TAIR:At5g04480 eggNOG:NOG322369
            HOGENOM:HOG000029739 InParanoid:Q940Y7 OMA:SMCDILN PhylomeDB:Q940Y7
            ProtClustDB:CLSN2689455 Genevestigator:Q940Y7 Uniprot:Q940Y7
        Length = 1050

 Score = 2454 (868.9 bits), Expect = 6.6e-255, P = 6.6e-255
 Identities = 461/803 (57%), Positives = 568/803 (70%)

Query:     1 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 60
             MQEPF S+PL+WI+ ED LANRLPVY   G  +L+S+W+S F+R +V+VFP +TLPML+S
Sbjct:   253 MQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHS 312

Query:    61 VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120
             VLD GNF VIP S  DVWA E+YS++H K  LR+ N F +D+++++V+GSSFFY+E SWD
Sbjct:   313 VLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWD 372

Query:   121 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180
              AVAMH +GPLL +Y RR    GSFKFVFL GNST G +DA+QEVASRLGL E +VRH+G
Sbjct:   373 NAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFG 432

Query:   181 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF 240
              N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFPI+K+Y+A+    IF
Sbjct:   433 LNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIF 492

Query:   241 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300
             F++++P+ L +AFS  IS+G+LSKFA+T+AS+GRL  KN++A +C+T YAR+LEN+L+FP
Sbjct:   493 FRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFP 552

Query:   301 SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-- 358
             SD  LPG ISQLQ  +WEWN FR E++     IL+            S +V  +EE+F  
Sbjct:   553 SDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----SAYAFIGKSGIVFQVEEKFMG 608

Query:   359 ---TKNITENENRSADQDTISELDWDVLHDIXXXXXXXXXXXXXXXXXXDGTFASWDDIY 415
                + N  +N       +  S+LDWDVL +I                  +     W++IY
Sbjct:   609 VIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIY 668

Query:   416 RNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXXXXXXXX 475
             RNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAWPFLHHGSLYRG         
Sbjct:   669 RNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRR 728

Query:   476 XXXXXXXXXXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL 535
                        L LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSL
Sbjct:   729 LSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSL 788

Query:   536 SISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFE 594
             S  AE+ LE  + QET+G+++YFW  LD+DG    + N  LTFWSMCDILN G+CRT FE
Sbjct:   789 SSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-ALTFWSMCDILNQGNCRTTFE 847

Query:   595 DAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNAXX 654
             DAFR MYGLP H+EALPPMPEDG  WS+LH WVM TPSFLEF+MFSRMF +SLDAL+   
Sbjct:   848 DAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNL 907

Query:   655 XXXXXXXXXXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGF 714
                             HCYCRVLELLVNVWAYHSGRKMVY++P  GSL+EQHP+++R+G 
Sbjct:   908 NDSKSCSLASSLLERKHCYCRVLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLQQRKGL 967

Query:   715 MWMKYFNFTLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKGIXXXXXXXXXXQXXXX 774
             MW KYFNFTLLKSM            +PRE+WLWP TGEVHWKG+               
Sbjct:   968 MWAKYFNFTLLKSMDEDLAEAADDKDHPRERWLWPLTGEVHWKGVYEREREERYRLKMDK 1027

Query:   775 XXXXXXXXFDRLTKGYRQKTLGG 797
                     +DR+  GY+QK+LGG
Sbjct:  1028 KRKTKEKLYDRIKNGYKQKSLGG 1050


>TAIR|locus:2124953 [details] [associations]
            symbol:AT4G01210 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058 "biosynthetic
            process" evidence=IEA;ISS] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISM;ISS] [GO:0001666
            "response to hypoxia" evidence=RCA] [GO:0019375 "galactolipid
            biosynthetic process" evidence=RCA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
            Pfam:PF00534 GO:GO:0005794 GO:GO:0009058 EMBL:CP002687
            GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 IPI:IPI00542780
            RefSeq:NP_192030.4 UniGene:At.32583 UniGene:At.3800
            ProteinModelPortal:F4JHZ4 PRIDE:F4JHZ4 EnsemblPlants:AT4G01210.1
            GeneID:828040 KEGG:ath:AT4G01210 OMA:INAGNCR Uniprot:F4JHZ4
        Length = 1031

 Score = 873 (312.4 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
 Identities = 164/350 (46%), Positives = 213/350 (60%)

Query:   410 SWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXX 469
             +W+D+Y++A++++R K + +ERDEGEL RTGQP+CIYE Y G G W FLH   LYRG   
Sbjct:   627 TWEDVYKSAKRADRSKNDLHERDEGELLRTGQPLCIYEPYFGEGTWSFLHQDPLYRGVGL 686

Query:   470 XXXXXXXXXXXXXXXXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAA 529
                              L L N  +YRD L + G  F+I+NK+D +HK  WIGFQSWRA 
Sbjct:   687 SVKGRRPRMDDVDASSRLPLFNNPYYRDALGDFGAFFAISNKIDRLHKNSWIGFQSWRAT 746

Query:   530 GRKVSLSISAEKVLEETVQETE-GDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGH 588
              RK SLS  AE  L   +Q  + GD +YFW  +D D    RN      FWS CD +N G+
Sbjct:   747 ARKESLSKIAEDALLNAIQTRKHGDALYFWVRMDKD---PRNPLQK-PFWSFCDAINAGN 802

Query:   589 CRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLD 648
             CR A+ +  ++MY +  ++++LPPMPEDG  WS +  W + T SFLEF+MFSRMFVDSLD
Sbjct:   803 CRFAYNETLKKMYSI-KNLDSLPPMPEDGDTWSVMQSWALPTRSFLEFVMFSRMFVDSLD 861

Query:   649 ALNAXXXXXXXXXXXXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPI 708
             A                     HCY RVLELLVNVWAYHS R++VY+DP +G +QEQH  
Sbjct:   862 A-QIYEEHHRTNRCYLSLTKDKHCYSRVLELLVNVWAYHSARRIVYIDPETGLMQEQHKQ 920

Query:   709 ERRRGFMWMKYFNFTLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKG 758
             + RRG MW+K+F++T LK+M                 WLWPWTGE+ W+G
Sbjct:   921 KNRRGKMWVKWFDYTTLKTMDEDLAEEADSDRRVGH-WLWPWTGEIVWRG 969

 Score = 526 (190.2 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
 Identities = 115/331 (34%), Positives = 189/331 (57%)

Query:     1 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 60
             MQEPF S+PL+W+I E++LA R   Y   G   LL+ WK +FSR +V+VF +Y LP+LY+
Sbjct:   236 MQEPFKSLPLIWVINEETLAVRSRQYNSTGQTELLTDWKKIFSRASVVVFHNYLLPILYT 295

Query:    61 VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120
               DAGNF+VIPGSP +V      +K+ E +  +K      D++V+ +VGS F Y     +
Sbjct:   296 EFDAGNFYVIPGSPEEV----CKAKNLE-FPPQK------DDVVISIVGSQFLYKGQWLE 344

Query:   121 YAVAMHDVGPLLI-KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179
             +A+ +  + PL    Y   ++     K + L G +   Y+ A++ ++  L   + +V+H 
Sbjct:   345 HALLLQALRPLFSGNYLESDN--SHLKIIVLGGETASNYSVAIETISQNLTYPKEAVKHV 402

Query:   180 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI 239
                G+V+ +L  +D+V+YGS   EQ FP ++++AM+ G P++ PD   I++YV +     
Sbjct:   403 RVAGNVDKILESSDLVIYGSFLEEQSFPEILMKAMSLGKPIVAPDLFNIRKYVDDRVTGY 462

Query:   240 FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 299
              F K N + LS+     I+ GK+S  A+ +A  G+   KNM+A + +  YA +LEN+L F
Sbjct:   463 LFPKQNLKVLSQVVLEVITEGKISPLAQKIAMMGKTTVKNMMARETIEGYAALLENMLKF 522

Query:   300 PSDALLPGPISQLQ---QVSWEWNLFRKEID 327
              S+   P  + ++    +  W W+ F   +D
Sbjct:   523 SSEVASPKDVQKVPPELREEWSWHPFEAFMD 553

 Score = 37 (18.1 bits), Expect = 9.7e-51, Sum P(2) = 9.7e-51
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query:   353 LLEEEFTKNITENENRSADQDTISEL 378
             L +E+  KN+ + E +   +D +S +
Sbjct:   971 LEKEKQKKNLEKEEKKKKSRDKLSRM 996


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      797       707   0.00083  121 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  638 (68 KB)
  Total size of DFA:  430 KB (2203 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  55.21u 0.11s 55.32t   Elapsed:  00:00:04
  Total cpu time:  55.21u 0.11s 55.32t   Elapsed:  00:00:04
  Start:  Tue May 21 11:30:21 2013   End:  Tue May 21 11:30:25 2013

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