Query 003758
Match_columns 797
No_of_seqs 200 out of 2496
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 03:08:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c48_A Predicted glycosyltrans 100.0 5.1E-28 1.7E-32 264.0 31.0 272 7-300 145-429 (438)
2 3fro_A GLGA glycogen synthase; 100.0 8.4E-29 2.9E-33 267.8 24.3 268 6-299 144-433 (439)
3 2jjm_A Glycosyl transferase, g 100.0 1.8E-28 6.3E-33 264.7 24.7 261 7-299 125-388 (394)
4 3okp_A GDP-mannose-dependent a 100.0 8.4E-28 2.9E-32 256.8 26.0 266 7-306 109-389 (394)
5 2x6q_A Trehalose-synthase TRET 100.0 2.7E-27 9.1E-32 257.5 27.0 255 8-297 148-415 (416)
6 2r60_A Glycosyl transferase, g 100.0 2.6E-27 8.9E-32 264.8 26.3 273 7-300 143-463 (499)
7 1rzu_A Glycogen synthase 1; gl 100.0 2.7E-27 9.4E-32 262.9 21.4 235 38-300 200-479 (485)
8 2iw1_A Lipopolysaccharide core 99.9 2.4E-26 8.1E-31 244.3 24.7 230 44-297 136-372 (374)
9 2qzs_A Glycogen synthase; glyc 99.9 6.1E-27 2.1E-31 260.1 20.4 234 38-299 198-479 (485)
10 3oy2_A Glycosyltransferase B73 99.9 2.1E-26 7.2E-31 249.7 19.5 232 39-300 126-394 (413)
11 2gek_A Phosphatidylinositol ma 99.9 1.2E-25 4E-30 241.6 20.4 253 7-300 130-387 (406)
12 3vue_A GBSS-I, granule-bound s 99.9 1.6E-25 5.6E-30 256.9 20.7 235 38-298 235-513 (536)
13 3s28_A Sucrose synthase 1; gly 99.9 6.6E-25 2.3E-29 262.7 25.8 269 7-297 430-770 (816)
14 2iuy_A Avigt4, glycosyltransfe 99.9 6.5E-24 2.2E-28 224.9 19.4 221 6-299 103-338 (342)
15 2bfw_A GLGA glycogen synthase; 99.9 7.2E-24 2.5E-28 207.7 17.7 185 70-279 2-198 (200)
16 3qhp_A Type 1 capsular polysac 99.9 2.3E-21 7.9E-26 184.8 17.0 159 102-286 2-164 (166)
17 1uqt_A Alpha, alpha-trehalose- 99.9 1.7E-20 5.8E-25 213.0 26.0 210 65-296 219-454 (482)
18 3nb0_A Glycogen [starch] synth 99.9 3.3E-20 1.1E-24 216.1 25.9 278 5-298 203-635 (725)
19 2x0d_A WSAF; GT4 family, trans 99.9 9.2E-22 3.2E-26 218.3 12.3 206 41-286 189-400 (413)
20 2f9f_A First mannosyl transfer 99.9 6.3E-21 2.1E-25 185.8 15.2 146 95-262 16-165 (177)
21 2hy7_A Glucuronosyltransferase 99.8 5.4E-21 1.9E-25 210.8 12.3 225 7-299 146-382 (406)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 8E-20 2.7E-24 194.4 20.1 230 6-297 118-358 (364)
23 3beo_A UDP-N-acetylglucosamine 99.8 4.1E-20 1.4E-24 197.1 13.8 217 43-293 149-373 (375)
24 1vgv_A UDP-N-acetylglucosamine 99.8 2.1E-20 7E-25 200.4 10.6 255 6-298 109-378 (384)
25 2vsy_A XCC0866; transferase, g 99.8 2.2E-19 7.4E-24 203.6 16.1 198 65-299 344-562 (568)
26 3t5t_A Putative glycosyltransf 99.8 1.5E-17 5.2E-22 189.2 24.6 236 37-297 200-474 (496)
27 2xci_A KDO-transferase, 3-deox 99.8 2.3E-18 8E-23 188.1 16.5 206 38-281 147-364 (374)
28 1v4v_A UDP-N-acetylglucosamine 99.7 4.2E-17 1.4E-21 174.8 8.4 218 42-298 144-366 (376)
29 3rhz_A GTF3, nucleotide sugar 99.5 2.8E-13 9.7E-18 147.3 21.1 215 7-285 102-325 (339)
30 3dzc_A UDP-N-acetylglucosamine 99.5 4.3E-14 1.5E-18 155.8 12.5 203 43-276 165-381 (396)
31 3ot5_A UDP-N-acetylglucosamine 99.4 2.5E-13 8.6E-18 150.3 12.0 218 44-298 169-393 (403)
32 3s2u_A UDP-N-acetylglucosamine 99.2 2.7E-10 9.3E-15 124.0 20.9 208 43-292 136-354 (365)
33 3otg_A CALG1; calicheamicin, T 99.2 4.4E-11 1.5E-15 129.4 13.8 163 99-294 240-408 (412)
34 4hwg_A UDP-N-acetylglucosamine 99.2 8.7E-11 3E-15 129.6 13.4 201 44-276 146-356 (385)
35 2iyf_A OLED, oleandomycin glyc 99.2 9.2E-11 3.2E-15 128.2 11.7 162 100-293 231-398 (430)
36 4fzr_A SSFS6; structural genom 99.0 6.4E-10 2.2E-14 120.5 9.8 158 100-289 226-395 (398)
37 3tsa_A SPNG, NDP-rhamnosyltran 99.0 1.4E-09 4.7E-14 117.2 10.3 161 101-293 218-387 (391)
38 2o6l_A UDP-glucuronosyltransfe 98.9 9.9E-09 3.4E-13 98.7 12.8 130 100-262 20-157 (170)
39 3ia7_A CALG4; glycosysltransfe 98.9 7.1E-09 2.4E-13 111.3 11.1 132 145-295 261-399 (402)
40 3q3e_A HMW1C-like glycosyltran 98.8 1.3E-08 4.3E-13 118.5 13.3 181 93-297 430-624 (631)
41 2p6p_A Glycosyl transferase; X 98.8 4.5E-08 1.6E-12 105.3 15.9 161 100-293 209-378 (384)
42 3oti_A CALG3; calicheamicin, T 98.8 1.7E-08 5.7E-13 109.5 12.4 157 100-293 231-396 (398)
43 3rsc_A CALG2; TDP, enediyne, s 98.8 1.9E-08 6.4E-13 109.2 12.1 131 145-294 277-413 (415)
44 2yjn_A ERYCIII, glycosyltransf 98.7 4.8E-08 1.6E-12 107.8 12.2 161 101-293 267-434 (441)
45 2iya_A OLEI, oleandomycin glyc 98.6 4.2E-07 1.4E-11 99.3 15.1 117 143-278 283-405 (424)
46 1iir_A Glycosyltransferase GTF 98.3 1.6E-06 5.5E-11 94.8 11.1 156 102-299 239-401 (415)
47 1l5w_A Maltodextrin phosphoryl 98.2 1.2E-05 4.1E-10 95.6 14.9 191 92-298 514-732 (796)
48 1rrv_A Glycosyltransferase GTF 98.1 7.1E-06 2.4E-10 89.6 10.3 157 102-298 238-401 (416)
49 2c4m_A Glycogen phosphorylase; 98.0 4.9E-05 1.7E-09 90.5 16.4 192 92-298 504-721 (796)
50 2gj4_A Glycogen phosphorylase, 98.0 7.6E-05 2.6E-09 89.2 16.4 192 92-298 538-756 (824)
51 4amg_A Snogd; transferase, pol 98.0 3E-05 1E-09 83.2 11.9 83 170-262 285-371 (400)
52 3h4t_A Glycosyltransferase GTF 98.0 2.4E-05 8.3E-10 85.6 10.9 157 100-298 220-382 (404)
53 4gyw_A UDP-N-acetylglucosamine 97.9 0.00011 3.6E-09 87.5 16.8 182 92-296 513-705 (723)
54 3hbm_A UDP-sugar hydrolase; PS 97.1 0.0081 2.8E-07 63.6 15.1 67 147-225 186-252 (282)
55 2c1x_A UDP-glucose flavonoid 3 97.0 0.0041 1.4E-07 69.7 12.5 80 175-261 326-414 (456)
56 3hbf_A Flavonoid 3-O-glucosylt 96.9 0.013 4.5E-07 66.0 16.2 198 32-260 203-415 (454)
57 2pq6_A UDP-glucuronosyl/UDP-gl 96.9 0.027 9.3E-07 63.2 18.4 96 175-279 354-455 (482)
58 2acv_A Triterpene UDP-glucosyl 96.8 0.025 8.6E-07 63.4 17.0 121 144-275 306-442 (463)
59 2vch_A Hydroquinone glucosyltr 96.5 0.032 1.1E-06 62.8 15.7 80 176-260 341-430 (480)
60 2jzc_A UDP-N-acetylglucosamine 96.0 0.0098 3.3E-07 61.1 6.8 73 175-256 115-196 (224)
61 3l7i_A Teichoic acid biosynthe 95.9 0.079 2.7E-06 62.6 15.4 220 8-259 437-683 (729)
62 1psw_A ADP-heptose LPS heptosy 94.5 0.19 6.4E-06 53.0 11.1 114 89-223 167-286 (348)
63 1ygp_A Yeast glycogen phosphor 94.3 1.7 5.7E-05 52.4 19.6 145 92-242 582-760 (879)
64 3tov_A Glycosyl transferase fa 91.0 1.5 5E-05 47.1 12.2 116 94-232 177-295 (349)
65 2gt1_A Lipopolysaccharide hept 87.0 3.6 0.00012 42.8 11.5 135 101-259 178-322 (326)
66 1k68_A Phytochrome response re 86.0 8.6 0.0003 33.5 11.8 108 148-258 5-130 (140)
67 3heb_A Response regulator rece 85.5 7.7 0.00026 35.0 11.5 110 145-258 5-134 (152)
68 3kht_A Response regulator; PSI 85.5 7.1 0.00024 34.8 11.2 111 144-258 5-127 (144)
69 2zay_A Response regulator rece 85.4 12 0.00042 33.2 12.7 112 143-260 7-129 (147)
70 3jte_A Response regulator rece 83.4 14 0.00048 32.6 12.1 111 145-261 4-125 (143)
71 3ilh_A Two component response 83.2 10 0.00035 33.4 11.1 115 143-261 8-141 (146)
72 3h1g_A Chemotaxis protein CHEY 82.9 15 0.00052 32.0 12.0 110 145-259 6-127 (129)
73 1k66_A Phytochrome response re 82.6 12 0.00042 32.9 11.4 111 144-258 6-137 (149)
74 3cnb_A DNA-binding response re 82.4 19 0.00064 31.6 12.4 113 144-261 8-132 (143)
75 3cg4_A Response regulator rece 81.5 15 0.00053 32.3 11.6 110 143-258 6-126 (142)
76 2pln_A HP1043, response regula 81.1 19 0.00066 31.6 12.1 108 142-259 16-133 (137)
77 3hzh_A Chemotaxis response reg 81.1 13 0.00043 33.9 11.1 108 145-258 37-156 (157)
78 1jbe_A Chemotaxis protein CHEY 80.8 20 0.0007 30.8 12.0 110 144-258 4-124 (128)
79 1qkk_A DCTD, C4-dicarboxylate 80.7 19 0.00065 32.4 12.1 111 145-261 4-123 (155)
80 3h5i_A Response regulator/sens 80.3 28 0.00095 30.8 12.9 110 145-259 6-124 (140)
81 3grc_A Sensor protein, kinase; 79.5 22 0.00074 31.3 11.8 112 144-261 6-129 (140)
82 1i3c_A Response regulator RCP1 79.4 17 0.00059 32.6 11.3 111 143-257 7-135 (149)
83 3eul_A Possible nitrate/nitrit 79.0 17 0.00059 32.6 11.2 117 142-262 13-138 (152)
84 2qvg_A Two component response 78.3 20 0.00068 31.5 11.2 110 145-258 8-134 (143)
85 4e7p_A Response regulator; DNA 78.0 17 0.00059 32.6 10.9 115 143-261 19-142 (150)
86 3hdv_A Response regulator; PSI 77.9 27 0.00094 30.4 12.0 112 144-261 7-129 (136)
87 3gt7_A Sensor protein; structu 77.6 21 0.00071 32.3 11.4 112 144-261 7-129 (154)
88 2gkg_A Response regulator homo 77.3 26 0.00088 29.7 11.4 108 148-260 8-126 (127)
89 2qsj_A DNA-binding response re 77.2 12 0.00041 33.7 9.5 112 145-261 4-126 (154)
90 3kcn_A Adenylate cyclase homol 76.9 41 0.0014 30.0 13.1 110 145-261 5-125 (151)
91 2r25_B Osmosensing histidine p 76.7 30 0.001 30.3 12.0 108 148-259 5-127 (133)
92 3t6k_A Response regulator rece 76.6 34 0.0012 30.1 12.4 111 145-261 5-126 (136)
93 3to5_A CHEY homolog; alpha(5)b 76.4 29 0.001 32.0 12.1 111 143-258 11-132 (134)
94 1dbw_A Transcriptional regulat 76.0 36 0.0012 29.2 12.1 110 145-260 4-122 (126)
95 1mb3_A Cell division response 75.8 36 0.0012 28.9 11.9 107 148-259 4-121 (124)
96 2rjn_A Response regulator rece 75.0 30 0.001 31.0 11.6 112 143-260 6-127 (154)
97 3gl9_A Response regulator; bet 74.7 34 0.0012 29.5 11.6 106 148-258 5-121 (122)
98 3hdg_A Uncharacterized protein 74.6 26 0.00087 30.6 10.8 111 144-260 7-126 (137)
99 3lua_A Response regulator rece 72.8 11 0.00039 33.2 8.1 112 145-261 5-129 (140)
100 4dad_A Putative pilus assembly 72.5 11 0.00039 33.5 8.0 112 143-260 19-142 (146)
101 2qr3_A Two-component system re 72.1 32 0.0011 29.9 10.9 112 145-261 4-128 (140)
102 3cg0_A Response regulator rece 71.9 49 0.0017 28.7 12.4 112 143-259 8-128 (140)
103 3hv2_A Response regulator/HD d 71.4 41 0.0014 30.1 11.6 112 143-260 13-134 (153)
104 2qv0_A Protein MRKE; structura 71.2 50 0.0017 28.9 12.0 112 143-259 8-127 (143)
105 3eod_A Protein HNR; response r 70.9 35 0.0012 29.4 10.7 112 143-260 6-127 (130)
106 1dcf_A ETR1 protein; beta-alph 70.3 37 0.0012 29.6 10.8 113 144-262 7-132 (136)
107 2rdm_A Response regulator rece 70.2 41 0.0014 28.9 11.0 111 144-261 5-125 (132)
108 3crn_A Response regulator rece 70.1 54 0.0019 28.5 11.9 107 148-259 6-121 (132)
109 3lte_A Response regulator; str 69.0 52 0.0018 28.3 11.4 111 145-261 7-127 (132)
110 3cfy_A Putative LUXO repressor 68.7 57 0.0019 28.7 11.8 106 148-258 7-121 (137)
111 2qzj_A Two-component response 68.7 43 0.0015 29.5 11.0 109 145-259 5-121 (136)
112 3f6p_A Transcriptional regulat 68.5 52 0.0018 28.1 11.3 106 148-258 5-118 (120)
113 3m6m_D Sensory/regulatory prot 67.2 54 0.0019 29.1 11.4 110 144-259 14-136 (143)
114 1zgz_A Torcad operon transcrip 66.7 58 0.002 27.5 11.6 106 148-258 5-118 (122)
115 1p6q_A CHEY2; chemotaxis, sign 66.1 31 0.0011 29.6 9.3 109 145-258 7-126 (129)
116 1s8n_A Putative antiterminator 66.1 90 0.0031 29.5 13.8 110 145-260 14-132 (205)
117 3f6c_A Positive transcription 65.8 65 0.0022 27.7 11.5 109 148-261 4-122 (134)
118 2qxy_A Response regulator; reg 64.4 35 0.0012 30.0 9.4 110 145-261 5-123 (142)
119 3n53_A Response regulator rece 64.0 40 0.0014 29.5 9.8 107 148-260 6-123 (140)
120 3b2n_A Uncharacterized protein 63.3 62 0.0021 28.1 10.9 110 148-260 6-124 (133)
121 3nhm_A Response regulator; pro 63.1 73 0.0025 27.4 13.0 110 145-261 5-124 (133)
122 3i42_A Response regulator rece 62.8 57 0.002 27.9 10.4 110 145-260 4-123 (127)
123 1tmy_A CHEY protein, TMY; chem 62.8 68 0.0023 27.0 10.8 106 148-257 5-119 (120)
124 2j48_A Two-component sensor ki 62.3 34 0.0012 28.3 8.5 106 148-258 4-117 (119)
125 1xhf_A DYE resistance, aerobic 62.1 72 0.0025 27.0 11.9 106 148-258 6-119 (123)
126 3r0j_A Possible two component 62.1 86 0.0029 30.8 12.8 110 143-258 22-140 (250)
127 2gwr_A DNA-binding response re 62.0 89 0.003 30.4 12.8 109 145-259 6-122 (238)
128 2a9o_A Response regulator; ess 61.1 72 0.0025 26.6 12.0 107 148-259 4-118 (120)
129 1ys7_A Transcriptional regulat 60.8 1E+02 0.0035 29.5 12.8 108 144-257 7-123 (233)
130 3cz5_A Two-component response 60.6 46 0.0016 29.7 9.6 112 144-261 5-127 (153)
131 1srr_A SPO0F, sporulation resp 59.1 71 0.0024 27.1 10.3 106 148-258 6-120 (124)
132 1yio_A Response regulatory pro 58.5 83 0.0028 29.6 11.6 110 145-260 5-123 (208)
133 3mm4_A Histidine kinase homolo 57.4 83 0.0028 30.2 11.5 113 143-262 60-199 (206)
134 3rqi_A Response regulator prot 54.9 39 0.0013 31.7 8.4 109 144-258 7-124 (184)
135 2b4a_A BH3024; flavodoxin-like 54.0 68 0.0023 27.9 9.4 110 142-260 13-132 (138)
136 1mvo_A PHOP response regulator 53.2 1.1E+02 0.0037 26.3 14.0 109 148-261 6-123 (136)
137 2ayx_A Sensor kinase protein R 52.8 1.7E+02 0.0056 29.1 13.2 110 143-258 128-246 (254)
138 1kgs_A DRRD, DNA binding respo 52.1 1.2E+02 0.0042 28.8 11.7 106 148-258 5-119 (225)
139 3a10_A Response regulator; pho 51.5 1E+02 0.0036 25.6 10.3 105 148-257 4-115 (116)
140 2pl1_A Transcriptional regulat 50.2 1.1E+02 0.0038 25.5 13.0 106 148-258 3-117 (121)
141 2jba_A Phosphate regulon trans 49.6 58 0.002 27.7 8.1 107 148-259 5-122 (127)
142 1qo0_D AMIR; binding protein, 48.2 1.5E+02 0.0052 27.6 11.5 106 144-260 12-126 (196)
143 4had_A Probable oxidoreductase 48.0 41 0.0014 35.3 8.1 69 143-224 47-117 (350)
144 3cu5_A Two component transcrip 47.4 1E+02 0.0034 27.1 9.6 80 178-258 34-122 (141)
145 1ydw_A AX110P-like protein; st 46.9 74 0.0025 33.6 9.9 71 143-223 29-101 (362)
146 2hqr_A Putative transcriptiona 46.8 67 0.0023 30.8 8.8 103 148-259 3-115 (223)
147 1dz3_A Stage 0 sporulation pro 46.5 1E+02 0.0035 26.4 9.3 109 148-260 5-124 (130)
148 3e9m_A Oxidoreductase, GFO/IDH 46.1 1.1E+02 0.0036 32.0 10.9 69 143-224 28-98 (330)
149 3c97_A Signal transduction his 44.7 1.6E+02 0.0053 25.6 12.1 110 145-260 11-131 (140)
150 2lpm_A Two-component response 43.9 42 0.0015 30.6 6.4 109 144-257 8-120 (123)
151 1a04_A Nitrate/nitrite respons 43.1 1.7E+02 0.0058 27.7 11.0 112 144-260 5-126 (215)
152 1zh2_A KDP operon transcriptio 42.6 1.5E+02 0.005 24.7 10.1 106 148-258 4-117 (121)
153 4fb5_A Probable oxidoreductase 42.5 45 0.0015 35.1 7.3 71 141-224 53-125 (393)
154 3q9s_A DNA-binding response re 41.3 1.3E+02 0.0046 29.7 10.3 109 145-259 38-154 (249)
155 2oqr_A Sensory transduction pr 40.8 1.1E+02 0.0037 29.3 9.3 109 145-259 5-121 (230)
156 3snk_A Response regulator CHEY 40.7 31 0.0011 30.1 4.9 110 144-259 14-133 (135)
157 4h3v_A Oxidoreductase domain p 40.5 77 0.0026 33.2 8.8 56 160-224 49-106 (390)
158 1p2f_A Response regulator; DRR 39.6 1.2E+02 0.0043 28.7 9.5 105 148-258 5-116 (220)
159 3t8y_A CHEB, chemotaxis respon 38.9 2.2E+02 0.0075 25.7 11.4 114 144-261 25-157 (164)
160 3kto_A Response regulator rece 38.3 51 0.0018 28.8 6.0 112 145-261 7-128 (136)
161 3luf_A Two-component system re 38.3 2.5E+02 0.0086 27.9 11.9 110 143-258 123-244 (259)
162 4gqa_A NAD binding oxidoreduct 37.6 77 0.0026 34.1 8.4 102 101-225 25-128 (412)
163 4f3y_A DHPR, dihydrodipicolina 37.1 49 0.0017 34.5 6.4 45 183-229 65-109 (272)
164 2l2q_A PTS system, cellobiose- 35.8 1.7E+02 0.0059 25.8 9.0 97 144-258 4-104 (109)
165 3n0r_A Response regulator; sig 35.3 2.6E+02 0.0088 28.6 11.6 110 143-260 159-278 (286)
166 2ixa_A Alpha-N-acetylgalactosa 35.1 1.2E+02 0.0042 33.1 9.6 75 143-224 43-122 (444)
167 3c3m_A Response regulator rece 34.8 2.2E+02 0.0076 24.6 12.6 109 148-261 6-125 (138)
168 1zh8_A Oxidoreductase; TM0312, 34.3 83 0.0029 33.1 7.8 69 143-224 43-113 (340)
169 3uuw_A Putative oxidoreductase 34.2 1.1E+02 0.0037 31.5 8.5 69 142-224 29-97 (308)
170 3v5n_A Oxidoreductase; structu 34.0 1.2E+02 0.0042 32.8 9.3 58 160-224 77-141 (417)
171 3nbm_A PTS system, lactose-spe 33.9 49 0.0017 29.8 5.0 78 143-226 5-87 (108)
172 3evn_A Oxidoreductase, GFO/IDH 32.3 63 0.0022 33.7 6.4 40 183-224 57-98 (329)
173 1rcu_A Conserved hypothetical 32.1 31 0.0011 34.4 3.7 68 184-256 111-192 (195)
174 3cea_A MYO-inositol 2-dehydrog 32.0 1.7E+02 0.0058 30.4 9.7 68 143-223 32-101 (346)
175 1w25_A Stalked-cell differenti 31.9 4.1E+02 0.014 28.4 13.1 106 148-258 4-120 (459)
176 3rc1_A Sugar 3-ketoreductase; 30.8 1.1E+02 0.0037 32.3 8.0 68 143-224 51-120 (350)
177 3dty_A Oxidoreductase, GFO/IDH 30.8 1.9E+02 0.0064 31.1 10.0 57 160-223 52-115 (398)
178 3kyj_B CHEY6 protein, putative 30.7 96 0.0033 27.2 6.5 104 143-251 12-127 (145)
179 3mz0_A Inositol 2-dehydrogenas 28.8 1.8E+02 0.0063 30.3 9.3 71 142-224 25-97 (344)
180 3moi_A Probable dehydrogenase; 28.2 1.3E+02 0.0044 32.2 8.1 68 143-224 26-95 (387)
181 3ezy_A Dehydrogenase; structur 27.5 1.1E+02 0.0036 32.1 7.2 70 142-224 24-95 (344)
182 3db2_A Putative NADPH-dependen 26.6 1.6E+02 0.0054 30.9 8.3 69 142-224 27-97 (354)
183 3ec7_A Putative dehydrogenase; 26.4 2.3E+02 0.0079 29.9 9.6 71 142-224 46-118 (357)
184 3euw_A MYO-inositol dehydrogen 25.5 2E+02 0.0068 30.0 8.8 69 143-225 27-97 (344)
185 4hkt_A Inositol 2-dehydrogenas 25.4 1.9E+02 0.0065 29.9 8.6 67 143-224 26-94 (331)
186 3q2i_A Dehydrogenase; rossmann 24.6 2.6E+02 0.0087 29.3 9.5 68 143-224 37-106 (354)
187 1ny5_A Transcriptional regulat 24.3 4.1E+02 0.014 28.4 11.3 108 148-260 3-119 (387)
188 2ho3_A Oxidoreductase, GFO/IDH 24.0 1.3E+02 0.0045 31.1 7.0 69 143-224 24-93 (325)
189 3m2t_A Probable dehydrogenase; 23.9 91 0.0031 33.1 5.9 69 143-224 29-99 (359)
190 1e2b_A Enzyme IIB-cellobiose; 23.4 1.4E+02 0.0048 26.5 6.1 70 146-220 5-76 (106)
191 3u80_A 3-dehydroquinate dehydr 23.2 1.7E+02 0.006 28.1 6.9 92 159-256 35-145 (151)
192 1p9l_A Dihydrodipicolinate red 22.9 1.8E+02 0.006 29.8 7.5 74 148-227 3-79 (245)
193 1mio_A Nitrogenase molybdenum 22.2 8.8E+02 0.03 27.4 15.3 118 119-260 183-305 (533)
194 3ohs_X Trans-1,2-dihydrobenzen 22.2 1.6E+02 0.0055 30.6 7.3 56 160-224 40-97 (334)
195 3ehd_A Uncharacterized conserv 22.0 86 0.0029 30.3 4.7 69 187-257 65-161 (162)
196 1tlt_A Putative oxidoreductase 21.9 1.8E+02 0.0061 30.0 7.5 68 143-224 29-96 (319)
197 1dc7_A NTRC, nitrogen regulati 21.5 48 0.0016 27.9 2.5 106 148-258 6-120 (124)
198 3oqb_A Oxidoreductase; structu 21.2 1.9E+02 0.0064 30.7 7.6 56 160-224 57-114 (383)
No 1
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.96 E-value=5.1e-28 Score=263.99 Aligned_cols=272 Identities=18% Similarity=0.212 Sum_probs=214.0
Q ss_pred CCCEEEEEccchhhhhhhhhhhhhH-H-HHHHHHHHHHhccCEEEecCCchHHH---hhCCCCCCEEEeCCCCCCchhhh
Q 003758 7 SIPLVWIIQEDSLANRLPVYVERGF-Q-NLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVE 81 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y~~~g~-e-klls~~~~~~~~AD~VV~ps~~l~~i---~~gld~~ki~VIPnsGVDvw~ae 81 (797)
++|+|+++|+............... . .........++.+|.|++.+...... ..|++..++.+||+ |+|. .
T Consensus 145 ~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~n-gvd~---~ 220 (438)
T 3c48_A 145 RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSP-GADV---E 220 (438)
T ss_dssp TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCC-CCCT---T
T ss_pred CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecC-Cccc---c
Confidence 6899999998643221100000000 0 01112244788999999988655443 25788889999998 9997 6
Q ss_pred hcccch--hHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeC----CC
Q 003758 82 AYSKSH--EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN----ST 155 (797)
Q Consensus 82 ~F~~s~--~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~----g~ 155 (797)
.|.+.. ....++++++++.+.++|+++|++... ||++.+++|+..+....+ ..+++ ++|+|. |+
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~----Kg~~~li~a~~~l~~~~p-----~~~~~-l~i~G~~~~~g~ 290 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPF----KGPQVLIKAVAALFDRDP-----DRNLR-VIICGGPSGPNA 290 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGG----GCHHHHHHHHHHHHHHCT-----TCSEE-EEEECCBC----
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeeccc----CCHHHHHHHHHHHHhhCC-----CcceE-EEEEeCCCCCCc
Confidence 665432 123488899999999999999998766 677999999998853221 13788 588898 55
Q ss_pred CCCHHHHHHHHHHcCCCCCeEEEecCh--hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhh
Q 003758 156 DGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 233 (797)
Q Consensus 156 ~~Y~e~Leela~elgL~d~~V~flG~~--edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~ 233 (797)
.. +.++++++++++.+ +|+++|.. +++..+|+.||++|+||..| |||++++|||+||+|||+++.+++++++.
T Consensus 291 ~~--~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~ 365 (438)
T 3c48_A 291 TP--DTYRHMAEELGVEK-RIRFLDPRPPSELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVA 365 (438)
T ss_dssp ----CHHHHHHHHTTCTT-TEEEECCCCHHHHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSC
T ss_pred HH--HHHHHHHHHcCCCC-cEEEcCCCChHHHHHHHHhCCEEEECcccc--CCchHHHHHHHcCCCEEecCCCChhHHhh
Confidence 44 88999999999987 89999954 88999999999999999998 99999999999999999999999999999
Q ss_pred cCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 003758 234 EGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300 (797)
Q Consensus 234 Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~p 300 (797)
++.+|++++++|+++|+++|..++++++. +.++++++++.+.++.+...++.|.++|+++++.+
T Consensus 366 ~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 366 EGETGLLVDGHSPHAWADALATLLDDDET---RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp BTTTEEEESSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcEEECCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999987 88999999999999555555889999999999854
No 2
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.96 E-value=8.4e-29 Score=267.78 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=217.0
Q ss_pred CCCCEEEEEccchhhhhhhhhh-hhhHH-----HHHHHHHHHHhccCEEEecCCchHHHhh---CCCCCCEEEeCCCCCC
Q 003758 6 HSIPLVWIIQEDSLANRLPVYV-ERGFQ-----NLLSYWKSVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPAD 76 (797)
Q Consensus 6 ~~IPVIW~IHE~sL~~rL~~y~-~~g~e-----klls~~~~~~~~AD~VV~ps~~l~~i~~---gld~~ki~VIPnsGVD 76 (797)
.++|+|+++|+.........+. ...+. .........++.+|.|++.+........ +++..++.+||| |+|
T Consensus 144 ~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n-gvd 222 (439)
T 3fro_A 144 FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GID 222 (439)
T ss_dssp HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC-CCC
T ss_pred cCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCC-CCC
Confidence 4789999999854221110000 00000 0012345578899999999876554433 367889999998 999
Q ss_pred chhhhhcccc-------hhHHHHHHHcCCCCCCEEEEEEcccc-ccccccccHHHHHHHHHHHHHHHhhhccCC--CCcE
Q 003758 77 VWAVEAYSKS-------HEKYQLRKENGFLKDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVE--GSFK 146 (797)
Q Consensus 77 vw~ae~F~~s-------~~k~slR~klGL~~d~~vIL~VGrl~-~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~--pdvk 146 (797)
. +.|.+. ..+..+++++|++++ ++|+++|++. .. ||++.+++|+..+. +.. ++++
T Consensus 223 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~----Kg~~~li~a~~~l~-------~~~~~~~~~ 287 (439)
T 3fro_A 223 C---SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQ----KGVDVLLKAIEILS-------SKKEFQEMR 287 (439)
T ss_dssp T---TTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTT----BCHHHHHHHHHHHH-------TSGGGGGEE
T ss_pred c---hhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEccccccc----ccHHHHHHHHHHHH-------hcccCCCeE
Confidence 8 666543 246788999999888 9999999988 66 66699999998884 233 6889
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 147 FVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 147 fLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
++|+|.|+..|.+.+++++++++ + .+.+.| +.+++..+|+.||++|+||..| |||++++||||||+|||+++
T Consensus 288 -l~i~G~g~~~~~~~l~~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~ 361 (439)
T 3fro_A 288 -FIIIGKGDPELEGWARSLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASA 361 (439)
T ss_dssp -EEEECCCCHHHHHHHHHHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEES
T ss_pred -EEEEcCCChhHHHHHHHHHhhcC--C-EEEEcCCCCHHHHHHHHHHCCEEEeCCCCC--CccHHHHHHHHCCCCeEEcC
Confidence 58999998777788999999888 4 789999 6788999999999999999998 99999999999999999999
Q ss_pred CCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 003758 225 FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 299 (797)
Q Consensus 225 ~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe-dpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~ 299 (797)
.++++|++.++ +|++++++|+++++++|..+++ +++. +..+++++++.++++.+...++.|.++|+++++.
T Consensus 362 ~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 362 VGGLRDIITNE-TGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp STHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTTTT---THHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred CCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 99999999887 8999999999999999999999 8887 8999999999997766666688999999998874
No 3
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.96 E-value=1.8e-28 Score=264.75 Aligned_cols=261 Identities=17% Similarity=0.205 Sum_probs=209.5
Q ss_pred CCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHh--hCCCCCCEEEeCCCCCCchhhhhcc
Q 003758 7 SIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYS 84 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~--~gld~~ki~VIPnsGVDvw~ae~F~ 84 (797)
++|+|+++|+....... ... .+....+..++.+|.|++++....... .+....++.+||| |+|. +.|.
T Consensus 125 ~~p~v~~~h~~~~~~~~-~~~-----~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~~ 194 (394)
T 2jjm_A 125 RIKIVTTLHGTDITVLG-SDP-----SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYN-FIDE---RVYF 194 (394)
T ss_dssp CSEEEEECCHHHHHTTT-TCT-----TTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCC-CCCT---TTCC
T ss_pred CCCEEEEEecCcccccC-CCH-----HHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecC-CccH---HhcC
Confidence 58999999985431110 000 111123456788999999986655442 2223578999998 9997 6665
Q ss_pred cchhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHH
Q 003758 85 KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 164 (797)
Q Consensus 85 ~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Lee 164 (797)
+. ....++++++++.+.++|+++|++... ||++.+++|+..+.. . .+++ ++|+|+++.. +.+++
T Consensus 195 ~~-~~~~~~~~~~~~~~~~~i~~~G~~~~~----Kg~~~li~a~~~l~~-------~-~~~~-l~i~G~g~~~--~~l~~ 258 (394)
T 2jjm_A 195 KR-DMTQLKKEYGISESEKILIHISNFRKV----KRVQDVVQAFAKIVT-------E-VDAK-LLLVGDGPEF--CTILQ 258 (394)
T ss_dssp CC-CCHHHHHHTTCC---CEEEEECCCCGG----GTHHHHHHHHHHHHH-------S-SCCE-EEEECCCTTH--HHHHH
T ss_pred Cc-chHHHHHHcCCCCCCeEEEEeeccccc----cCHHHHHHHHHHHHh-------h-CCCE-EEEECCchHH--HHHHH
Confidence 44 345678889998888999999998766 667999999988842 2 4678 5899998865 89999
Q ss_pred HHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEcCC
Q 003758 165 VASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKD 244 (797)
Q Consensus 165 la~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~ 244 (797)
+++++++.+ +|.++|..+++..+|+.||++|+||..| |||++++|||+||+|||+++.++++|++.++.+|++++++
T Consensus 259 ~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~ 335 (394)
T 2jjm_A 259 LVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE--SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVG 335 (394)
T ss_dssp HHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC--SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTT
T ss_pred HHHHcCCCC-eEEEeCchhhHHHHHHhCCEEEeccccC--CCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCC
Confidence 999999887 8999999889999999999999999998 9999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHhcC
Q 003758 245 NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML-ALDCVTRYARILENVLNF 299 (797)
Q Consensus 245 D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~-s~e~i~~Y~kLLe~lL~~ 299 (797)
|+++|+++|..++++++. +.++++++++.+.+.+ +...++.|.++|+++++.
T Consensus 336 d~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 336 DTTGVADQAIQLLKDEEL---HRNMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp CHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999887 8899999999995544 455588999999998764
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.96 E-value=8.4e-28 Score=256.76 Aligned_cols=266 Identities=15% Similarity=0.175 Sum_probs=211.0
Q ss_pred CCC-EEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHh--hCCCCCCEEEeCCCCCCchhhhhc
Q 003758 7 SIP-LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAY 83 (797)
Q Consensus 7 ~IP-VIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~--~gld~~ki~VIPnsGVDvw~ae~F 83 (797)
++| +|+++|........ . .......+..++.+|.|++.+......+ .+....++.+||| |+|. +.|
T Consensus 109 ~~~~~i~~~h~~~~~~~~----~---~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~ 177 (394)
T 3okp_A 109 GASKVIASTHGHEVGWSM----L---PGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPS-GVDV---KRF 177 (394)
T ss_dssp TCSEEEEECCSTHHHHTT----S---HHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCC-CBCT---TTS
T ss_pred CCCcEEEEeccchhhhhh----c---chhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecC-CcCH---HHc
Confidence 566 89999975442211 1 1112234557789999999986655442 2334578999998 9998 666
Q ss_pred cc-c-hhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHH
Q 003758 84 SK-S-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA 161 (797)
Q Consensus 84 ~~-s-~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~ 161 (797)
.+ . ..+..+++++|++.+.++|+++|++... |+++.+++|+..+.. ..++++ ++|+|+++.. +.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~----Kg~~~li~a~~~l~~-------~~~~~~-l~i~G~g~~~--~~ 243 (394)
T 3okp_A 178 TPATPEDKSATRKKLGFTDTTPVIACNSRLVPR----KGQDSLIKAMPQVIA-------ARPDAQ-LLIVGSGRYE--ST 243 (394)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGG----GCHHHHHHHHHHHHH-------HSTTCE-EEEECCCTTH--HH
T ss_pred CCCCchhhHHHHHhcCCCcCceEEEEEeccccc----cCHHHHHHHHHHHHh-------hCCCeE-EEEEcCchHH--HH
Confidence 55 2 3457889999999998999999998766 667999999988853 357888 5899998765 88
Q ss_pred HHHHHHHcCCCCCeEEEecCh--hhHHHHHHHcCEEEEccCC-------CCCCccHHHHHHHHhCCcEEEcCCCChhHhh
Q 003758 162 LQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQ-------VEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 232 (797)
Q Consensus 162 Leela~elgL~d~~V~flG~~--edl~~~L~aADV~V~PS~~-------Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI 232 (797)
+++++ .++.+ +|+++|.. +++..+|+.||++|+||.. | |||++++|||++|+|||+++.+++++++
T Consensus 244 l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~e~i 318 (394)
T 3okp_A 244 LRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE--GLGIVYLEAQACGVPVIAGTSGGAPETV 318 (394)
T ss_dssp HHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCC--SSCHHHHHHHHTTCCEEECSSTTGGGGC
T ss_pred HHHHH--hcccC-eEEEcCCCCHHHHHHHHHhCCEEEecCcccccccccc--ccCcHHHHHHHcCCCEEEeCCCChHHHH
Confidence 88877 56666 89999954 8999999999999999999 8 9999999999999999999999999999
Q ss_pred hcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHhcCCCCCCCC
Q 003758 233 AEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL-DCVTRYARILENVLNFPSDALLP 306 (797)
Q Consensus 233 ~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~-e~i~~Y~kLLe~lL~~psea~~P 306 (797)
.++ +|++++++|+++++++|..++++++. +.++++++++.+.+.|++ ..++.|.++|+++++.......|
T Consensus 319 ~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~ 389 (394)
T 3okp_A 319 TPA-TGLVVEGSDVDKLSELLIELLDDPIR---RAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAAALEH 389 (394)
T ss_dssp CTT-TEEECCTTCHHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--------
T ss_pred hcC-CceEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcchhhhh
Confidence 999 99999999999999999999999987 899999999999885555 55789999999987755444443
No 5
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.96 E-value=2.7e-27 Score=257.48 Aligned_cols=255 Identities=13% Similarity=0.165 Sum_probs=202.8
Q ss_pred CCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHhhCCCCCCEEEeCCCCCCchhhhhccc--
Q 003758 8 IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK-- 85 (797)
Q Consensus 8 IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~~gld~~ki~VIPnsGVDvw~ae~F~~-- 85 (797)
+|+|+++|....... ..+.......+.++|.+++..... ...++...++.+||| |+|. ..|..
T Consensus 148 ~p~v~~~h~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~s~~--~~~~~~~~~~~vi~n-gvd~---~~~~~~~ 212 (416)
T 2x6q_A 148 SPWLWRCHIDLSSPN---------REFWEFLRRFVEKYDRYIFHLPEY--VQPELDRNKAVIMPP-SIDP---LSEKNVE 212 (416)
T ss_dssp SCEEEECCSCCSSCC---------HHHHHHHHHHHTTSSEEEESSGGG--SCTTSCTTTEEECCC-CBCT---TSTTTSC
T ss_pred CCEEEEEccccCCcc---------HHHHHHHHHHHHhCCEEEEechHH--HHhhCCccceEEeCC-CCCh---hhhcccc
Confidence 899999997532211 111222344667888877543221 122455578999998 9997 44422
Q ss_pred --chhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCC---CHH
Q 003758 86 --SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---YND 160 (797)
Q Consensus 86 --s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~---Y~e 160 (797)
......++++++++++.++|+++|++... ||++.+++|+..+.. ..++++ ++|+|+++.. +.+
T Consensus 213 ~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~----Kg~~~li~a~~~l~~-------~~~~~~-l~i~G~g~~~~~~~~~ 280 (416)
T 2x6q_A 213 LKQTEILRILERFDVDPEKPIITQVSRFDPW----KGIFDVIEIYRKVKE-------KIPGVQ-LLLVGVMAHDDPEGWI 280 (416)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEEEECCCCTT----SCHHHHHHHHHHHHH-------HCTTCE-EEEEECCCTTCHHHHH
T ss_pred cChhhHHHHHHHhCCCCCCcEEEEEeccccc----cCHHHHHHHHHHHHH-------hCCCeE-EEEEecCcccchhHHH
Confidence 22456788999999999999999998776 667999999988853 346888 5899998742 246
Q ss_pred HHHHHHHHcCCCCCeEEEecC-----hhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcC
Q 003758 161 ALQEVASRLGLLEHSVRHYGF-----NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG 235 (797)
Q Consensus 161 ~Leela~elgL~d~~V~flG~-----~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg 235 (797)
.++++++++++.+ +|+|+|. .+++..+|+.||++|+||..| |||++++||||||+|||+++.+|++|++.++
T Consensus 281 ~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E--~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~ 357 (416)
T 2x6q_A 281 YFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRASDVILQMSIRE--GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG 357 (416)
T ss_dssp HHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSC--SSCHHHHHHHHTTCCEEEESCHHHHHHCCBT
T ss_pred HHHHHHHHhCCCC-cEEEecccCCCCHHHHHHHHHhCCEEEECCCcC--CCccHHHHHHHcCCCEEEccCCCChhheecC
Confidence 7888899999987 8999993 348999999999999999998 9999999999999999999999999999999
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHh
Q 003758 236 AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL-DCVTRYARILENVL 297 (797)
Q Consensus 236 ~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~-e~i~~Y~kLLe~lL 297 (797)
.+|++++ |+++|+++|..+++|++. +..+++++++.+.+.|++ ..++.|.++|++++
T Consensus 358 ~~g~l~~--d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 358 ETGFLVR--DANEAVEVVLYLLKHPEV---SKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp TTEEEES--SHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred CCeEEEC--CHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9999997 999999999999999987 889999999999865555 55789999998765
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.95 E-value=2.6e-27 Score=264.76 Aligned_cols=273 Identities=10% Similarity=0.058 Sum_probs=214.5
Q ss_pred CCCEEEEEccchhhhhhhhh----hhhhHH------HHHHHHHHHHhccCEEEecCCchHHHh-----hC-C----CCCC
Q 003758 7 SIPLVWIIQEDSLANRLPVY----VERGFQ------NLLSYWKSVFSRVNVIVFPDYTLPMLY-----SV-L----DAGN 66 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y----~~~g~e------klls~~~~~~~~AD~VV~ps~~l~~i~-----~g-l----d~~k 66 (797)
++|+|+++|+.......... ....+. ......+..++.+|.|++++....... .| + +.++
T Consensus 143 ~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~k 222 (499)
T 2r60_A 143 GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDK 222 (499)
T ss_dssp CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGG
T ss_pred CCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCC
Confidence 68999999985432211000 000000 111122457889999999886655542 24 5 6679
Q ss_pred EEEeCCCCCCchhhhhcccch---hHHHHHHHcC-----CCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhh
Q 003758 67 FFVIPGSPADVWAVEAYSKSH---EKYQLRKENG-----FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARR 138 (797)
Q Consensus 67 i~VIPnsGVDvw~ae~F~~s~---~k~slR~klG-----L~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~l 138 (797)
+.|||| |||. +.|.+.. .+..+++++| ++.+.++|+++|++... ||++.+++|+..+....+
T Consensus 223 i~vi~n-gvd~---~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~----Kg~~~li~a~~~l~~~~~-- 292 (499)
T 2r60_A 223 FSVIPP-GVNT---RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQK----KNHYGLVEAYVQNKELQD-- 292 (499)
T ss_dssp EEECCC-CBCT---TTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGG----GCHHHHHHHHHTCHHHHH--
T ss_pred eEEECC-CcCh---hhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccc----cCHHHHHHHHHHHHHhCC--
Confidence 999998 9998 6665432 2467888888 88888999999998776 677999999988854332
Q ss_pred ccCCCCcEEEEEEeCCCCC-------------CHHHHHHHHHHcCCCCCeEEEecC--hhhHHHHHHHc----CEEEEcc
Q 003758 139 NSVEGSFKFVFLCGNSTDG-------------YNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMA----DIVLYGS 199 (797)
Q Consensus 139 k~~~pdvkfLIIvG~g~~~-------------Y~e~Leela~elgL~d~~V~flG~--~edl~~~L~aA----DV~V~PS 199 (797)
..++ ++|+|..+.. |.+.++++++++++.+ +|+|+|. .+++..+|+.| |++|+||
T Consensus 293 ----~~~~-l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS 366 (499)
T 2r60_A 293 ----KANL-VLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTS 366 (499)
T ss_dssp ----HCEE-EEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECC
T ss_pred ----CceE-EEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc-eEEECCCCCHHHHHHHHHhcCcCCCEEEECc
Confidence 1245 5888882221 1588999999999987 8999995 58999999999 9999999
Q ss_pred CCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 003758 200 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 279 (797)
Q Consensus 200 ~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~ 279 (797)
..| |||++++|||+||+|||+++.++++|++.++.+|++++++|+++|+++|..++++++. +..+++++++.+.+
T Consensus 367 ~~E--g~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 367 FYE--PFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEET---WSAYQEKGKQRVEE 441 (499)
T ss_dssp SCB--CCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHH
T ss_pred ccC--CCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHH
Confidence 998 9999999999999999999999999999999999999999999999999999999987 88999999999998
Q ss_pred hcHH-HHHHHHHHHHHHHhcCC
Q 003758 280 MLAL-DCVTRYARILENVLNFP 300 (797)
Q Consensus 280 ~~s~-e~i~~Y~kLLe~lL~~p 300 (797)
.|++ .+++.|.++|++++...
T Consensus 442 ~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 442 RYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HSBHHHHHHHHHHHHHHHHHC-
T ss_pred hCCHHHHHHHHHHHHHHHHhhh
Confidence 5555 55889999999998854
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.95 E-value=2.7e-27 Score=262.88 Aligned_cols=235 Identities=14% Similarity=0.087 Sum_probs=192.2
Q ss_pred HHHHHhccCEEEecCCchHHHh----hC--------CCCCCEEEeCCCCCCchhhhhcccch------------------
Q 003758 38 WKSVFSRVNVIVFPDYTLPMLY----SV--------LDAGNFFVIPGSPADVWAVEAYSKSH------------------ 87 (797)
Q Consensus 38 ~~~~~~~AD~VV~ps~~l~~i~----~g--------ld~~ki~VIPnsGVDvw~ae~F~~s~------------------ 87 (797)
.+..+..+|.|++.+....... .| ++..++.+||| |||. +.|.+..
T Consensus 200 ~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T 1rzu_A 200 LKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVN-GIDA---DVWNPATDHLIHDNYSAANLKNRAL 275 (485)
T ss_dssp HHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCC-CBCT---TTSCTTTCTTSSSCCBTTBCTTHHH
T ss_pred HHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcC-CCcc---cccCCcccccccccccccchhhHHH
Confidence 3456788999999886654442 13 36689999998 9998 6665432
Q ss_pred hHHHHHHHcCCCCC-CEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHH
Q 003758 88 EKYQLRKENGFLKD-EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 166 (797)
Q Consensus 88 ~k~slR~klGL~~d-~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela 166 (797)
.+..+++++|++.+ .++|+++|++... ||++.+++|+..+.. ++++ ++|+|.|+..+.+.+++++
T Consensus 276 ~~~~~r~~~~~~~~~~~~i~~vGrl~~~----Kg~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~~~~ 341 (485)
T 1rzu_A 276 NKKAVAEHFRIDDDGSPLFCVISRLTWQ----KGIDLMAEAVDEIVS---------LGGR-LVVLGAGDVALEGALLAAA 341 (485)
T ss_dssp HHHHHHHHHTCCCSSSCEEEEESCBSTT----TTHHHHHTTHHHHHH---------TTCE-EEEEECBCHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCeEEEEEccCccc----cCHHHHHHHHHHHHh---------cCce-EEEEeCCchHHHHHHHHHH
Confidence 25678899999875 6799999998877 666999999988842 3788 5899998754568889988
Q ss_pred HHcCCCCCeEE-EecCh-hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcC---------
Q 003758 167 SRLGLLEHSVR-HYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG--------- 235 (797)
Q Consensus 167 ~elgL~d~~V~-flG~~-edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg--------- 235 (797)
++++ + +|. +.|.. +++..+|+.||++|+||..| |||++++||||||+|||+++.+|++|++.++
T Consensus 342 ~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~ 416 (485)
T 1rzu_A 342 SRHH--G-RVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKA 416 (485)
T ss_dssp HHTT--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTC
T ss_pred HhCC--C-cEEEecCCCHHHHHHHHhcCCEEEECcccC--CCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccC
Confidence 8875 3 676 78854 44689999999999999998 9999999999999999999999999999998
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH---hCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 003758 236 AQVIFFQKDNPEGLSRAFSLFI---SNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300 (797)
Q Consensus 236 ~nG~Lfd~~D~eeLAeaI~~LL---edpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~p 300 (797)
.+|++++++|+++|+++|..++ +|++. +.++++++++ +++.+..++++|.++|+++++.+
T Consensus 417 ~~G~l~~~~d~~~la~~i~~ll~~~~~~~~---~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 417 ATGVQFSPVTLDGLKQAIRRTVRYYHDPKL---WTQMQKLGMK--SDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp CCBEEESSCSHHHHHHHHHHHHHHHTCHHH---HHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC--
T ss_pred CcceEeCCCCHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHH--HhCChHHHHHHHHHHHHHhhCCC
Confidence 8999999999999999999999 78876 7888888874 45555566889999999998754
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.95 E-value=2.4e-26 Score=244.30 Aligned_cols=230 Identities=17% Similarity=0.204 Sum_probs=197.5
Q ss_pred ccCEEEecCCchHHH---hhCCCCCCEEEeCCCCCCchhhhhcccc---hhHHHHHHHcCCCCCCEEEEEEccccccccc
Q 003758 44 RVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKS---HEKYQLRKENGFLKDEIVVVVVGSSFFYNEL 117 (797)
Q Consensus 44 ~AD~VV~ps~~l~~i---~~gld~~ki~VIPnsGVDvw~ae~F~~s---~~k~slR~klGL~~d~~vIL~VGrl~~~KGl 117 (797)
.+|.|++.+...... ..+++..++.+||| |+|. +.|.+. ..+..+++++|++.++++|+++|++...
T Consensus 136 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~n-gv~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~--- 208 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKHYQTEPERFQILPP-GIYP---DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGR--- 208 (374)
T ss_dssp CCCEEEESCHHHHHHHHHHHCCCGGGEEECCC-CCCG---GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTT---
T ss_pred CCcEEEEcCHHHHHHHHHHhCCChhheEEecC-CcCH---HhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhh---
Confidence 689999888655443 24788889999998 9998 555443 2356788999999999999999998776
Q ss_pred cccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEE
Q 003758 118 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLY 197 (797)
Q Consensus 118 ~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~ 197 (797)
||++.+++|+..+.... .++++ ++++|.++. +.++++++++++.+ +|+++|..+++..+|+.||++|+
T Consensus 209 -K~~~~li~a~~~l~~~~------~~~~~-l~i~G~g~~---~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~ 276 (374)
T 2iw1_A 209 -KGVDRSIEALASLPESL------RHNTL-LFVVGQDKP---RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLH 276 (374)
T ss_dssp -TTHHHHHHHHHTSCHHH------HHTEE-EEEESSSCC---HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEE
T ss_pred -cCHHHHHHHHHHhHhcc------CCceE-EEEEcCCCH---HHHHHHHHHcCCCC-cEEECCCcccHHHHHHhcCEEEe
Confidence 66799999998774321 25788 589999874 88999999999987 89999998999999999999999
Q ss_pred ccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEc-CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 003758 198 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQ-KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 276 (797)
Q Consensus 198 PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd-~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ 276 (797)
||..| |||++++|||+||+|||+++.+++++++.++.+|++++ ++|+++++++|..++++++. ++.+++++++.
T Consensus 277 ps~~e--~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~ 351 (374)
T 2iw1_A 277 PAYQE--AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHY 351 (374)
T ss_dssp CCSCC--SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHH
T ss_pred ccccC--CcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHH
Confidence 99998 99999999999999999999999999999999999998 89999999999999999987 89999999999
Q ss_pred HHHhcHHHHHHHHHHHHHHHh
Q 003758 277 AKNMLALDCVTRYARILENVL 297 (797)
Q Consensus 277 ak~~~s~e~i~~Y~kLLe~lL 297 (797)
+.++.+....+.+.++++..+
T Consensus 352 ~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 352 ADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHhhHHHHHHHHHHHHHHhh
Confidence 999877777888888887654
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.95 E-value=6.1e-27 Score=260.07 Aligned_cols=234 Identities=15% Similarity=0.086 Sum_probs=189.7
Q ss_pred HHHHHhccCEEEecCCchHHHh----hCCC--------C--CCEEEeCCCCCCchhhhhcccch----------------
Q 003758 38 WKSVFSRVNVIVFPDYTLPMLY----SVLD--------A--GNFFVIPGSPADVWAVEAYSKSH---------------- 87 (797)
Q Consensus 38 ~~~~~~~AD~VV~ps~~l~~i~----~gld--------~--~ki~VIPnsGVDvw~ae~F~~s~---------------- 87 (797)
.+..+..+|.|++.+....... .|.. . .++.+||| |||. +.|.+..
T Consensus 198 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~n-gvd~---~~~~~~~~~~~~~~~~~~~~~~~ 273 (485)
T 2qzs_A 198 LKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLN-GVDE---KIWSPETDLLLASRYTRDTLEDK 273 (485)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCC-CCCT---TTSCTTTCTTSSSCCCTTCGGGG
T ss_pred HHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEec-CCCc---cccCccccccccccccccchhHH
Confidence 3456788999999886654442 2332 2 78999998 9998 6665432
Q ss_pred --hHHHHHHHcCCCC--CCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHH
Q 003758 88 --EKYQLRKENGFLK--DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQ 163 (797)
Q Consensus 88 --~k~slR~klGL~~--d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Le 163 (797)
.+..+++++|++. +.++|+++|++... ||++.+++|+..+.. ++++ ++|+|.|+..+.+.++
T Consensus 274 ~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~----Kg~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~ 339 (485)
T 2qzs_A 274 AENKRQLQIAMGLKVDDKVPLFAVVSRLTSQ----KGLDLVLEALPGLLE---------QGGQ-LALLGAGDPVLQEGFL 339 (485)
T ss_dssp HHHHHHHHHHHTCCCCTTSCEEEEEEEESGG----GCHHHHHHHHHHHHH---------TTCE-EEEEEEECHHHHHHHH
T ss_pred HHhHHHHHHHcCCCCCCCCeEEEEeccCccc----cCHHHHHHHHHHHhh---------CCcE-EEEEeCCchHHHHHHH
Confidence 2567889999986 77899999998776 667999999988842 3788 5889988754568888
Q ss_pred HHHHHcCCCCCeEE-EecCh-hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcC------
Q 003758 164 EVASRLGLLEHSVR-HYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG------ 235 (797)
Q Consensus 164 ela~elgL~d~~V~-flG~~-edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg------ 235 (797)
+++++++ + +|. +.|.. +++..+|+.||++|+||..| |||++++||||||+|||+++.+|++|++.++
T Consensus 340 ~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~ 414 (485)
T 2qzs_A 340 AAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVILVPSRFE--PCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLA 414 (485)
T ss_dssp HHHHHST--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHH
T ss_pred HHHHhCC--C-cEEEeCCCCHHHHHHHHHhCCEEEECCccC--CCcHHHHHHHHCCCCEEECCCCCccceeccCcccccc
Confidence 9888876 3 675 88854 45689999999999999998 9999999999999999999999999999998
Q ss_pred ---CeEEEEcCCCHHHHHHHHHHHH---hCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 003758 236 ---AQVIFFQKDNPEGLSRAFSLFI---SNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 299 (797)
Q Consensus 236 ---~nG~Lfd~~D~eeLAeaI~~LL---edpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~ 299 (797)
.+|++++++|+++|+++|..++ +|++. +.++++++++ +++.+..++++|.++|++++..
T Consensus 415 ~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~---~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 415 DGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSL---WRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp TTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHH---HHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred ccccceEEECCCCHHHHHHHHHHHHHHcCCHHH---HHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 8999999999999999999999 68876 7888888874 4555556688999999998653
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.94 E-value=2.1e-26 Score=249.74 Aligned_cols=232 Identities=14% Similarity=0.091 Sum_probs=194.8
Q ss_pred HHHHhccC--EEEecCCchHHHh--hCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCC--CCEEEEEEcccc
Q 003758 39 KSVFSRVN--VIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK--DEIVVVVVGSSF 112 (797)
Q Consensus 39 ~~~~~~AD--~VV~ps~~l~~i~--~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~--d~~vIL~VGrl~ 112 (797)
...++++| .|++.+....... .++ ..++.+||| |+|. +.| ...+++++++. +.++|+++|++.
T Consensus 126 ~~~~~~~~~~~ii~~S~~~~~~~~~~~~-~~~~~vi~n-gvd~---~~~------~~~~~~~~~~~~~~~~~il~vGr~~ 194 (413)
T 3oy2_A 126 WWIFSHPKVVGVMAMSKCWISDICNYGC-KVPINIVSH-FVDT---KTI------YDARKLVGLSEYNDDVLFLNMNRNT 194 (413)
T ss_dssp GGGGGCTTEEEEEESSTHHHHHHHHTTC-CSCEEECCC-CCCC---CCC------TTHHHHTTCGGGTTSEEEECCSCSS
T ss_pred HHHHhccCCceEEEcCHHHHHHHHHcCC-CCceEEeCC-CCCH---HHH------HHHHHhcCCCcccCceEEEEcCCCc
Confidence 34677878 9998887665543 344 579999998 9998 555 34567788887 899999999987
Q ss_pred ccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCC----HHHHHHHHHHcCCCCCe-------EEEec-
Q 003758 113 FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY----NDALQEVASRLGLLEHS-------VRHYG- 180 (797)
Q Consensus 113 ~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y----~e~Leela~elgL~d~~-------V~flG- 180 (797)
.. ||++.+++|+..+.. ..++++ ++|+|.++... .+.++++++++++.+ + |.+.|
T Consensus 195 ~~----Kg~~~li~a~~~l~~-------~~~~~~-l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~ 261 (413)
T 3oy2_A 195 AR----KRLDIYVLAAARFIS-------KYPDAK-VRFLCNSHHESKFDLHSIALRELVASGVDN-VFTHLNKIMINRTV 261 (413)
T ss_dssp GG----GTHHHHHHHHHHHHH-------HCTTCC-EEEEEECCTTCSCCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSC
T ss_pred hh----cCcHHHHHHHHHHHH-------hCCCcE-EEEEeCCcccchhhHHHHHHHHHHHcCccc-ccccccceeeccCc
Confidence 77 666999999998753 357888 58888886532 378889999999987 6 88889
Q ss_pred -ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCe---------------EE--EEc
Q 003758 181 -FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQ---------------VI--FFQ 242 (797)
Q Consensus 181 -~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~n---------------G~--Lfd 242 (797)
+.+++..+|+.||++|+||..| |||++++|||+||+|||+++.+|++|++.++.+ |+ +++
T Consensus 262 ~~~~~~~~~~~~adv~v~pS~~E--~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~ 339 (413)
T 3oy2_A 262 LTDERVDMMYNACDVIVNCSSGE--GFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEG 339 (413)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCC--SSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEE
T ss_pred CCHHHHHHHHHhCCEEEeCCCcC--CCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeC
Confidence 4679999999999999999998 999999999999999999999999999999887 99 999
Q ss_pred CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHH-HHHHHHHHHHHhcCC
Q 003758 243 KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDC-VTRYARILENVLNFP 300 (797)
Q Consensus 243 ~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~-i~~Y~kLLe~lL~~p 300 (797)
++|+++|+++| .++++++. +.++++++++.+.+.|+++. +++|.++|+++++..
T Consensus 340 ~~d~~~la~~i-~l~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 340 IIDVDDLVEAF-TFFKDEKN---RKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp ECCHHHHHHHH-HHTTSHHH---HHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred CCCHHHHHHHH-HHhcCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 99999999999 99999987 89999999999976655555 789999999998854
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.93 E-value=1.2e-25 Score=241.64 Aligned_cols=253 Identities=15% Similarity=0.196 Sum_probs=199.9
Q ss_pred CCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHH-hhCCCCCCEEEeCCCCCCchhhhhccc
Q 003758 7 SIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSK 85 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i-~~gld~~ki~VIPnsGVDvw~ae~F~~ 85 (797)
++|+|+++|+....... . ..+...+...++.+|.|++.+...... ...++..++ +||+ |+|. ..|..
T Consensus 130 ~~~~i~~~h~~~~~~~~----~---~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~-~v~~---~~~~~ 197 (406)
T 2gek_A 130 EGPIVATFHTSTTKSLT----L---SVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPN-GVDV---ASFAD 197 (406)
T ss_dssp ESSEEEEECCCCCSHHH----H---HHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCC-CBCH---HHHHT
T ss_pred CCCEEEEEcCcchhhhh----H---HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecC-CCCh---hhcCC
Confidence 68999999985332211 1 111122236789999999998665444 344556688 9998 8997 44433
Q ss_pred chhHHHHHHHcCCCCCCEEEEEEccc-cccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHH
Q 003758 86 SHEKYQLRKENGFLKDEIVVVVVGSS-FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 164 (797)
Q Consensus 86 s~~k~slR~klGL~~d~~vIL~VGrl-~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Lee 164 (797)
.. ...+++.+.++|+++|++ ... ||++.+++++..+. +..++++ ++|+|.++. +.+++
T Consensus 198 ~~------~~~~~~~~~~~i~~~G~~~~~~----Kg~~~li~a~~~l~-------~~~~~~~-l~i~G~~~~---~~l~~ 256 (406)
T 2gek_A 198 AP------LLDGYPREGRTVLFLGRYDEPR----KGMAVLLAALPKLV-------ARFPDVE-ILIVGRGDE---DELRE 256 (406)
T ss_dssp CC------CCTTCSCSSCEEEEESCTTSGG----GCHHHHHHHHHHHH-------TTSTTCE-EEEESCSCH---HHHHH
T ss_pred Cc------hhhhccCCCeEEEEEeeeCccc----cCHHHHHHHHHHHH-------HHCCCeE-EEEEcCCcH---HHHHH
Confidence 21 112344456799999998 666 66799999998874 4457899 589998874 67777
Q ss_pred HHHHcCCCCCeEEEecC--hhhHHHHHHHcCEEEEccC-CCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEE
Q 003758 165 VASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF 241 (797)
Q Consensus 165 la~elgL~d~~V~flG~--~edl~~~L~aADV~V~PS~-~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lf 241 (797)
+++++ .+ +|+++|. ..++..+|+.||++|+||. .| |||++++|||+||+|||+++.+++++++.++.+|+++
T Consensus 257 ~~~~~--~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~ 331 (406)
T 2gek_A 257 QAGDL--AG-HLRFLGQVDDATKASAMRSADVYCAPHLGGE--SFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV 331 (406)
T ss_dssp HTGGG--GG-GEEECCSCCHHHHHHHHHHSSEEEECCCSCC--SSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC
T ss_pred HHHhc--cC-cEEEEecCCHHHHHHHHHHCCEEEecCCCCC--CCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe
Confidence 77766 44 8999994 4678999999999999996 77 9999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 003758 242 QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300 (797)
Q Consensus 242 d~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~p 300 (797)
+++|+++++++|..++++++. +..+++++++.+.++.+...++.|.++|+++++..
T Consensus 332 ~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 332 PVDDADGMAAALIGILEDDQL---RAGYVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp CTTCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred CCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999987 88999999999996666666889999999998743
No 12
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.93 E-value=1.6e-25 Score=256.90 Aligned_cols=235 Identities=13% Similarity=0.102 Sum_probs=179.2
Q ss_pred HHHHHhccCEEEecCCchHH-Hhh--C--------CCCCCEEEeCCCCCCchhhhhcccc-------------------h
Q 003758 38 WKSVFSRVNVIVFPDYTLPM-LYS--V--------LDAGNFFVIPGSPADVWAVEAYSKS-------------------H 87 (797)
Q Consensus 38 ~~~~~~~AD~VV~ps~~l~~-i~~--g--------ld~~ki~VIPnsGVDvw~ae~F~~s-------------------~ 87 (797)
.+..+..||.|++.+..... +.. + ....++.+||| |||. +.|.+. .
T Consensus 235 ~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~N-GiD~---~~~~p~~d~~~~~~~~~~~~~~~K~~ 310 (536)
T 3vue_A 235 MKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVN-GMDV---SEWDPSKDKYITAKYDATTAIEAKAL 310 (536)
T ss_dssp HHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCC-CCCT---TTSCTTTCSSSSCCCCTTTHHHHHHH
T ss_pred HHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEEC-Ccch---hhcCCCCccccccccchhhhhhhhHH
Confidence 45578889999988754332 221 1 23568999999 9998 555432 1
Q ss_pred hHHHHHHHcCCC--CCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHH
Q 003758 88 EKYQLRKENGFL--KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEV 165 (797)
Q Consensus 88 ~k~slR~klGL~--~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leel 165 (797)
.+..+++.+|++ ++.++|+++||+... ||++.+++|+..|. ..+.+ ++++|.|+..+...++..
T Consensus 311 ~k~~l~~~~gl~~d~~~p~i~~vgRl~~~----Kg~~~li~a~~~l~---------~~~~~-l~l~G~G~~~~~~~~~~~ 376 (536)
T 3vue_A 311 NKEALQAEAGLPVDRKIPLIAFIGRLEEQ----KGPDVMAAAIPELM---------QEDVQ-IVLLGTGKKKFEKLLKSM 376 (536)
T ss_dssp HHHHHHHHTTSCCCTTSCEEEEECCBSGG----GCHHHHHHHHHHHT---------TSSCE-EEEECCBCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCcEEEEEeecccc----CChHHHHHHHHHhH---------hhCCe-EEEEeccCchHHHHHHHH
Confidence 345677788875 567899999999887 56699999998883 24567 578898876655566666
Q ss_pred HHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEE----
Q 003758 166 ASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI---- 239 (797)
Q Consensus 166 a~elgL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~---- 239 (797)
+..++ . +|.+.+ ..+++..+|+.||++|+||.+| |||++++|||+||+|||++++||++|+|.|++||+
T Consensus 377 ~~~~~--~-~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E--~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~ 451 (536)
T 3vue_A 377 EEKYP--G-KVRAVVKFNAPLAHLIMAGADVLAVPSRFE--PCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGR 451 (536)
T ss_dssp HHHST--T-TEEEECSCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCC
T ss_pred HhhcC--C-ceEEEEeccHHHHHHHHHhhheeecccccC--CCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCcccccc
Confidence 66544 3 577777 5677899999999999999999 99999999999999999999999999999999998
Q ss_pred ------EEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 240 ------FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 240 ------Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
+|++.|+++|+++|.++++..+. +.++++.+++. .+++.|..++++|.++|+++..
T Consensus 452 ~~~~g~l~~~~d~~~la~ai~ral~~~~~-~~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L~~ 513 (536)
T 3vue_A 452 LSVDCKVVEPSDVKKVAATLKRAIKVVGT-PAYEEMVRNCM--NQDLSWKGPAKNWENVLLGLGV 513 (536)
T ss_dssp CCSCTTCCCHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHH--HSCCSSHHHHHHHHHHHHTTCC
T ss_pred CCCceeEECCCCHHHHHHHHHHHHHhcCc-HHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhhh
Confidence 67778899999999988862221 22566665553 2455566668899999998743
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.93 E-value=6.6e-25 Score=262.67 Aligned_cols=269 Identities=10% Similarity=0.050 Sum_probs=203.0
Q ss_pred CCCEEEEEccchhhhhhhh-hhhhhHHH------HHHHHHHHHhccCEEEecCCchHHH-------hh------------
Q 003758 7 SIPLVWIIQEDSLANRLPV-YVERGFQN------LLSYWKSVFSRVNVIVFPDYTLPML-------YS------------ 60 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~-y~~~g~ek------lls~~~~~~~~AD~VV~ps~~l~~i-------~~------------ 60 (797)
++|+|+++|.......... ........ .+..-..+++.||.||+++...... +.
T Consensus 430 gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr 509 (816)
T 3s28_A 430 GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYR 509 (816)
T ss_dssp TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEE
T ss_pred CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhh
Confidence 6899999997432221100 00000000 0111233789999999987544331 11
Q ss_pred -----CCCCCCEEEeCCCCCCchhhhhcccchhH------------------HHHHHHcCC--CCCCEEEEEEccccccc
Q 003758 61 -----VLDAGNFFVIPGSPADVWAVEAYSKSHEK------------------YQLRKENGF--LKDEIVVVVVGSSFFYN 115 (797)
Q Consensus 61 -----gld~~ki~VIPnsGVDvw~ae~F~~s~~k------------------~slR~klGL--~~d~~vIL~VGrl~~~K 115 (797)
+....++.|||| |||. +.|.+.... ...++.+|+ +.++++|+++|++...
T Consensus 510 ~~~gI~~~~~ki~VIpn-GVD~---~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~- 584 (816)
T 3s28_A 510 VVHGIDVFDPKFNIVSP-GADM---SIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRV- 584 (816)
T ss_dssp EEESCCTTCTTEEECCC-CCCT---TTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTT-
T ss_pred cccccccCCCCEEEECC-CcCH---HHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCccc-
Confidence 122339999998 9998 666543211 122345666 7788999999998877
Q ss_pred cccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCC---------CCHHHHHHHHHHcCCCCCeEEEecC-----
Q 003758 116 ELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYNDALQEVASRLGLLEHSVRHYGF----- 181 (797)
Q Consensus 116 Gl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~---------~Y~e~Leela~elgL~d~~V~flG~----- 181 (797)
||++.+++|+..+.... ++++ ++|+|.+++ .+.+.++++++++++.+ +|.|+|.
T Consensus 585 ---KGid~LIeA~~~L~~~~-------~~v~-LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~~~v 652 (816)
T 3s28_A 585 ---KNLSGLVEWYGKNTRLR-------ELAN-LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQMDRV 652 (816)
T ss_dssp ---TTHHHHHHHHHHCHHHH-------HHCE-EEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCCCHH
T ss_pred ---CCHHHHHHHHHHHHhhC-------CCeE-EEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCC-cEEEccCccccC
Confidence 66699999999885432 4677 589999883 13578889999999987 9999993
Q ss_pred -hhhHHHHHH-HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH--
Q 003758 182 -NGDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI-- 257 (797)
Q Consensus 182 -~edl~~~L~-aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL-- 257 (797)
.+++..+|+ ++|++|+||..| |||++++||||||+|||+++.||++|++.++.+|++++++|+++++++|..++
T Consensus 653 ~~~eL~~~~~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~ 730 (816)
T 3s28_A 653 RNGELYRYICDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTK 730 (816)
T ss_dssp HHHHHHHHHHHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCeEEEECCCcc--CccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 256888888 689999999998 99999999999999999999999999999999999999999999999997777
Q ss_pred --hCcccHHHHHHHHHHHHHHHHHhcHHHH-HHHHHHHHHHHh
Q 003758 258 --SNGKLSKFARTVASAGRLHAKNMLALDC-VTRYARILENVL 297 (797)
Q Consensus 258 --edpel~~~r~~m~~~aRk~ak~~~s~e~-i~~Y~kLLe~lL 297 (797)
.|++. +.++++++++.+.+.|+++. +++|.++|+...
T Consensus 731 Ll~d~~~---~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 731 CKEDPSH---WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHCTHH---HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred hccCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 88887 89999999999966666555 789999998764
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.91 E-value=6.5e-24 Score=224.90 Aligned_cols=221 Identities=15% Similarity=0.077 Sum_probs=178.7
Q ss_pred CCCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHhhCCCCCCEEEeCCCCCCchhhhhccc
Q 003758 6 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK 85 (797)
Q Consensus 6 ~~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~~gld~~ki~VIPnsGVDvw~ae~F~~ 85 (797)
.++| |+++|+...... .+|.|++.+......+.. ..++.+||| |+|. +.|.+
T Consensus 103 ~~~p-v~~~h~~~~~~~---------------------~~d~ii~~S~~~~~~~~~--~~~~~vi~n-gvd~---~~~~~ 154 (342)
T 2iuy_A 103 PGTA-FISSHHFTTRPV---------------------NPVGCTYSSRAQRAHCGG--GDDAPVIPI-PVDP---ARYRS 154 (342)
T ss_dssp TTCE-EEEEECSSSBCS---------------------CCTTEEESCHHHHHHTTC--CTTSCBCCC-CBCG---GGSCC
T ss_pred cCCC-EEEecCCCCCcc---------------------cceEEEEcCHHHHHHHhc--CCceEEEcC-CCCh---hhcCc
Confidence 4789 999998543211 188899888776666544 678999998 9997 55544
Q ss_pred chhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHH
Q 003758 86 SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEV 165 (797)
Q Consensus 86 s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leel 165 (797)
... .. .++++|+++|++... ||++.+++|+..+ +++ ++|+|.|+.. +.++++
T Consensus 155 ~~~--------~~-~~~~~i~~vG~~~~~----Kg~~~li~a~~~~------------~~~-l~i~G~g~~~--~~l~~~ 206 (342)
T 2iuy_A 155 AAD--------QV-AKEDFLLFMGRVSPH----KGALEAAAFAHAC------------GRR-LVLAGPAWEP--EYFDEI 206 (342)
T ss_dssp STT--------CC-CCCSCEEEESCCCGG----GTHHHHHHHHHHH------------TCC-EEEESCCCCH--HHHHHH
T ss_pred ccc--------cC-CCCCEEEEEeccccc----cCHHHHHHHHHhc------------CcE-EEEEeCcccH--HHHHHH
Confidence 321 12 345589999998866 6679999999765 466 5899999865 889999
Q ss_pred HHHcCCCCCeEEEecC--hhhHHHHHHHcCEEEEccC----------CCCCCccHHHHHHHHhCCcEEEcCCCChhHhhh
Q 003758 166 ASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSS----------QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 233 (797)
Q Consensus 166 a~elgL~d~~V~flG~--~edl~~~L~aADV~V~PS~----------~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~ 233 (797)
+++++ + +|+|+|. ..++..+|+.||++|+||. .| |||++++|||+||+|||+++.++++|++.
T Consensus 207 ~~~~~--~-~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E--~~~~~~~EAma~G~PvI~s~~~~~~e~~~ 281 (342)
T 2iuy_A 207 TRRYG--S-TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCE--PGATVVSEAAVSGTPVVGTGNGCLAEIVP 281 (342)
T ss_dssp HHHHT--T-TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCC--CCCHHHHHHHHTTCCEEECCTTTHHHHGG
T ss_pred HHHhC--C-CEEEeccCCHHHHHHHHHhCCEEEECCccccccccccccc--CccHHHHHHHhcCCCEEEcCCCChHHHhc
Confidence 98887 4 7999994 5578999999999999999 77 99999999999999999999999999999
Q ss_pred c--CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH-HhcHHHHHHHHHHHHHHHhcC
Q 003758 234 E--GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK-NMLALDCVTRYARILENVLNF 299 (797)
Q Consensus 234 D--g~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak-~~~s~e~i~~Y~kLLe~lL~~ 299 (797)
+ +.+|+++++ |+++++++|.++++ ++++++.+. ++.+...+++|.++|+++++.
T Consensus 282 ~~~~~~g~~~~~-d~~~l~~~i~~l~~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 282 SVGEVVGYGTDF-APDEARRTLAGLPA-----------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp GGEEECCSSSCC-CHHHHHHHHHTSCC-----------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCceEEcCC-CHHHHHHHHHHHHH-----------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 9 889999999 99999999999986 446777774 455555588999999999874
No 15
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.91 E-value=7.2e-24 Score=207.75 Aligned_cols=185 Identities=13% Similarity=0.110 Sum_probs=154.7
Q ss_pred eCCCCCCchhhhhcc--cchh-----HHHHHHHcCCCCCCEEEEEEcccc-ccccccccHHHHHHHHHHHHHHHhhhccC
Q 003758 70 IPGSPADVWAVEAYS--KSHE-----KYQLRKENGFLKDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSV 141 (797)
Q Consensus 70 IPnsGVDvw~ae~F~--~s~~-----k~slR~klGL~~d~~vIL~VGrl~-~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~ 141 (797)
||| |||. +.|. +... +..+++++|++.+ ++|+++|++. .. |+++.+++++..+.. ++.
T Consensus 2 ipn-gvd~---~~f~~~~~~~~~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~----K~~~~li~a~~~l~~-----~~~ 67 (200)
T 2bfw_A 2 SHN-GIDC---SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQ----KGVDVLLKAIEILSS-----KKE 67 (200)
T ss_dssp ----CCCT---TTSSGGGSCSCHHHHHHHHHHHTTCCSC-EEEEEESCBCSSS----SCHHHHHHHHHHHTT-----SGG
T ss_pred CCC-ccCh---hhccccccccchhhHHHHHHHHcCCCCC-CEEEEeecccccc----CCHHHHHHHHHHHHh-----hcc
Confidence 566 8988 7776 5432 6678999999755 4999999987 66 667999999987730 023
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEE-ecC--hhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCC
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRH-YGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI 218 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~f-lG~--~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~ 218 (797)
.++++ ++++|.++..+.+.+++++++++ +|++ +|. .+++..+|+.||++|+||..| |||++++|||++|+
T Consensus 68 ~~~~~-l~i~G~~~~~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e--~~~~~~~Ea~a~G~ 140 (200)
T 2bfw_A 68 FQEMR-FIIIGKGDPELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGA 140 (200)
T ss_dssp GGGEE-EEEECCBCHHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTC
T ss_pred CCCeE-EEEECCCChHHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCC--CccHHHHHHHHCCC
Confidence 46788 58899887323488888888776 4999 994 458999999999999999998 99999999999999
Q ss_pred cEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHH
Q 003758 219 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKN 279 (797)
Q Consensus 219 PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe-dpel~~~r~~m~~~aRk~ak~ 279 (797)
|||+++.+++++++ ++.+|++++++|+++++++|..+++ +++. +.++++++++++++
T Consensus 141 PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~---~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 141 IPIASAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMS 198 (200)
T ss_dssp EEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHH
T ss_pred CEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHh
Confidence 99999999999999 8899999999999999999999999 9987 88999999999887
No 16
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.87 E-value=2.3e-21 Score=184.79 Aligned_cols=159 Identities=16% Similarity=0.252 Sum_probs=135.1
Q ss_pred CEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec-
Q 003758 102 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG- 180 (797)
Q Consensus 102 ~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG- 180 (797)
+++|+++|++... ||++.+++|+..+ +..++++ ++++|.++.. +.++++++++++ +|++ |
T Consensus 2 ~~~i~~~G~~~~~----Kg~~~li~a~~~l--------~~~~~~~-l~i~G~g~~~--~~~~~~~~~~~~---~v~~-g~ 62 (166)
T 3qhp_A 2 PFKIAMVGRYSNE----KNQSVLIKAVALS--------KYKQDIV-LLLKGKGPDE--KKIKLLAQKLGV---KAEF-GF 62 (166)
T ss_dssp CEEEEEESCCSTT----TTHHHHHHHHHTC--------TTGGGEE-EEEECCSTTH--HHHHHHHHHHTC---EEEC-CC
T ss_pred ceEEEEEeccchh----cCHHHHHHHHHHh--------ccCCCeE-EEEEeCCccH--HHHHHHHHHcCC---eEEE-ee
Confidence 5789999998777 6669999999876 2237889 5899998875 899999998887 5888 8
Q ss_pred -ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCC-cEEE-cCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 181 -FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-PVIT-PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 181 -~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~-PVIa-sd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
+.+++..+|+.||++|+||..| |||++++|||++|+ |||+ ++.++..+++.++.+ +++++|+++++++|..++
T Consensus 63 ~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 63 VNSNELLEILKTCTLYVHAANVE--SEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCHHHHHHHHTTCSEEEECCCSC--CCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCEEEECCccc--CccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 4688999999999999999998 99999999999998 9999 568899999988754 889999999999999999
Q ss_pred hCcccHHHHHHHHHHHHHHHHHhcHHHHH
Q 003758 258 SNGKLSKFARTVASAGRLHAKNMLALDCV 286 (797)
Q Consensus 258 edpel~~~r~~m~~~aRk~ak~~~s~e~i 286 (797)
++++. +..++++++++++++.+..++
T Consensus 139 ~~~~~---~~~~~~~~~~~~~~~s~~~~~ 164 (166)
T 3qhp_A 139 ENKLE---RERMQNEYAKSALNYTLENSV 164 (166)
T ss_dssp HCHHH---HHHHHHHHHHHHHHHC-----
T ss_pred hCHHH---HHHHHHHHHHHHHHCChhhhh
Confidence 99987 889999999999766655544
No 17
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.86 E-value=1.7e-20 Score=212.96 Aligned_cols=210 Identities=10% Similarity=0.017 Sum_probs=162.9
Q ss_pred CCEEEeCCCCCCchhhhhcccchh------HHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhh
Q 003758 65 GNFFVIPGSPADVWAVEAYSKSHE------KYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARR 138 (797)
Q Consensus 65 ~ki~VIPnsGVDvw~ae~F~~s~~------k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~l 138 (797)
.++.+||+ |||. +.|.+... ...+|++++ ++++|+++|++... ||+..+++|+..++...+..
T Consensus 219 ~~v~vip~-GID~---~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~----Kgi~~ll~A~~~ll~~~p~~ 287 (482)
T 1uqt_A 219 FRTEVYPI-GIEP---KEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYS----KGLPERFLAYEALLEKYPQH 287 (482)
T ss_dssp EEEEECCC-CCCH---HHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGG----GCHHHHHHHHHHHHHHCGGG
T ss_pred EEEEEEec-cCCH---HHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCccc----CCHHHHHHHHHHHHHhCccc
Confidence 57889998 9998 66643211 356777776 67899999998877 66699999999998766543
Q ss_pred ccCCCCcEEEEEEeCCCC--C-----CHHHHHHHHHHcC----CCC-CeEEEe-c--ChhhHHHHHHHcCEEEEccCCCC
Q 003758 139 NSVEGSFKFVFLCGNSTD--G-----YNDALQEVASRLG----LLE-HSVRHY-G--FNGDVNGVLLMADIVLYGSSQVE 203 (797)
Q Consensus 139 k~~~pdvkfLIIvG~g~~--~-----Y~e~Leela~elg----L~d-~~V~fl-G--~~edl~~~L~aADV~V~PS~~Ee 203 (797)
+ .+++ |+++|.... . +.+.+++++.+++ ..+ ..|.++ | +.+++..+|+.|||+|+||..|
T Consensus 288 ~---~~v~-Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~E- 362 (482)
T 1uqt_A 288 H---GKIR-YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRD- 362 (482)
T ss_dssp T---TTEE-EEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSB-
T ss_pred c---CcEE-EEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcc-
Confidence 3 4677 477775321 1 1244555554432 110 026654 5 6789999999999999999999
Q ss_pred CCccHHHHHHHHhCC-----cEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 003758 204 QGFPSLIVRAMTFGI-----PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK 278 (797)
Q Consensus 204 ~GFPlvLLEAMA~G~-----PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak 278 (797)
|||++++||||||+ |||+|+.+|..+.+. +|+++++.|+++++++|..++++++ ++++.+++++++.+.
T Consensus 363 -GfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~~~--~~r~~~~~~~~~~v~ 436 (482)
T 1uqt_A 363 -GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTMSL--AERISRHAEMLDVIV 436 (482)
T ss_dssp -SCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHH
T ss_pred -cCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH
Confidence 99999999999997 999999998888883 5899999999999999999998654 237889999999999
Q ss_pred HhcHHHHHHHHHHHHHHH
Q 003758 279 NMLALDCVTRYARILENV 296 (797)
Q Consensus 279 ~~~s~e~i~~Y~kLLe~l 296 (797)
++.+...++.|.+.|+.+
T Consensus 437 ~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 437 KNDINHWQECFISDLKQI 454 (482)
T ss_dssp HTCHHHHHHHHHHHHHHS
T ss_pred hCCHHHHHHHHHHHHHhc
Confidence 987777789999999876
No 18
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.86 E-value=3.3e-20 Score=216.12 Aligned_cols=278 Identities=11% Similarity=0.107 Sum_probs=188.1
Q ss_pred CCCCCEEEEEccchhhhhh------hhhhh------------hhHHHHHHHHHHHHhccCEEEecCCchHHH---hhCCC
Q 003758 5 FHSIPLVWIIQEDSLANRL------PVYVE------------RGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLD 63 (797)
Q Consensus 5 F~~IPVIW~IHE~sL~~rL------~~y~~------------~g~eklls~~~~~~~~AD~VV~ps~~l~~i---~~gld 63 (797)
+..+|.|+|||...++..+ ..|.. ..+....+..+..+..||.|++.+.....- ..+..
T Consensus 203 ~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~ 282 (725)
T 3nb0_A 203 RIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEHLLKRK 282 (725)
T ss_dssp TCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHHTSSC
T ss_pred CCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHHhcCC
Confidence 4579999999986433321 11110 011123344455788999999887554332 23444
Q ss_pred CCCEEEeCCCCCCchhhhhcccch--------hHHHHHHH--------cCCCCCC-EEEEEEccccccccccccHHHHHH
Q 003758 64 AGNFFVIPGSPADVWAVEAYSKSH--------EKYQLRKE--------NGFLKDE-IVVVVVGSSFFYNELSWDYAVAMH 126 (797)
Q Consensus 64 ~~ki~VIPnsGVDvw~ae~F~~s~--------~k~slR~k--------lGL~~d~-~vIL~VGrl~~~KGl~Kn~~lLLk 126 (797)
...+ ||| |+|+ +.|.+.. .+..+.+. ++++.++ ++|.++||+... .||++++++
T Consensus 283 ~d~i--IpN-GID~---~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~---nKGiDl~ie 353 (725)
T 3nb0_A 283 PDGI--LPN-GLNV---IKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYK---NKGADMFIE 353 (725)
T ss_dssp CSEE--CCC-CBCC---CCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTT---TTTHHHHHH
T ss_pred CCEE--EcC-Cccc---cccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccc---cCCHHHHHH
Confidence 4433 998 9998 7776531 12233222 2455344 456667987744 377799999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEEEEeCCCCCC------------------------------------------------
Q 003758 127 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY------------------------------------------------ 158 (797)
Q Consensus 127 Al~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y------------------------------------------------ 158 (797)
|+..|.........+..-+.| +|++.+...+
T Consensus 354 Al~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 432 (725)
T 3nb0_A 354 ALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432 (725)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCC
T ss_pred HHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCC
Confidence 999996554322222344565 5555543321
Q ss_pred ---------------------------------------HHHHHHHHHHcCCCCCe------EEEec---Ch------hh
Q 003758 159 ---------------------------------------NDALQEVASRLGLLEHS------VRHYG---FN------GD 184 (797)
Q Consensus 159 ---------------------------------------~e~Leela~elgL~d~~------V~flG---~~------ed 184 (797)
.+.+...++++++.+ . |.|++ +. .+
T Consensus 433 ~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N-~~~drVKVIf~P~~L~~~d~lf~~d 511 (725)
T 3nb0_A 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFN-SPSDRVKMIFHPEFLNANNPILGLD 511 (725)
T ss_dssp HHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCC-CTTCSEEEEECCSCCCTTCSSSCCC
T ss_pred HHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCC-CcCCceeEEEeccccCCCCccchhH
Confidence 223334445666665 4 67776 22 26
Q ss_pred HHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCC-------eEEEEc---CCCHHHHHHHHH
Q 003758 185 VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA-------QVIFFQ---KDNPEGLSRAFS 254 (797)
Q Consensus 185 l~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~-------nG~Lfd---~~D~eeLAeaI~ 254 (797)
+..+|+.||++|+||.+| |||++++||||||+|||+++.+|++++|.++. +|++++ +.|+++++++|.
T Consensus 512 ~~~~~~~advfV~PS~~E--gfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa 589 (725)
T 3nb0_A 512 YDEFVRGCHLGVFPSYYE--PWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLV 589 (725)
T ss_dssp HHHHHHHCSEEECCCSSB--SSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHH
T ss_pred HHHHHhhceEEEeccccC--CCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999998863 698884 456777776666
Q ss_pred HHHh-----CcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 255 LFIS-----NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 255 ~LLe-----dpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
.++. ++.. +..++.++++.++.+.|..+++.|.++|+.++.
T Consensus 590 ~aL~~f~~~d~~~---r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 590 DYMEEFVKKTRRQ---RINQRNATEALSDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp HHHHHHHTCCHHH---HHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 6654 3333 778899999999888888889999999999986
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.86 E-value=9.2e-22 Score=218.33 Aligned_cols=206 Identities=13% Similarity=0.130 Sum_probs=149.4
Q ss_pred HHhccC--EEEecCCchHHH--hhCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCCCCEEEEEEcccccccc
Q 003758 41 VFSRVN--VIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 116 (797)
Q Consensus 41 ~~~~AD--~VV~ps~~l~~i--~~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~d~~vIL~VGrl~~~KG 116 (797)
.+..++ .+++++...... ..|++..++.++|+ |+|. +.|.. + ..+ ..++..|+++|++...+
T Consensus 189 ~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~-g~d~---~~~~~-------~-~~~-~~~~~~il~~gr~~~~~- 254 (413)
T 2x0d_A 189 TYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQP-KINT---TLKNY-------I-NDK-RQKEKIILVYGRPSVKR- 254 (413)
T ss_dssp TTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECC-CCCH---HHHTT-------T-TSC-CCCCSEEEEEECTTCGG-
T ss_pred HhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCC-CcCc---hhhcc-------c-ccc-cCCCCEEEEEecCchhc-
Confidence 455554 466666555443 34666567888987 8886 43321 1 112 23455788899865442
Q ss_pred ccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCE
Q 003758 117 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADI 194 (797)
Q Consensus 117 l~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV 194 (797)
|+++.+++|+..+....+. ..+++ ++++|+++.. .++++.+ +|+|+| +.+++..+|+.||+
T Consensus 255 --Kg~~~li~A~~~l~~~~~~----~~~~~-l~ivG~~~~~---------~~l~~~~-~v~f~G~~~~~~l~~~~~~adv 317 (413)
T 2x0d_A 255 --NAFTLIVEALKIFVQKYDR----SNEWK-IISVGEKHKD---------IALGKGI-HLNSLGKLTLEDYADLLKRSSI 317 (413)
T ss_dssp --GCHHHHHHHHHHHHHHCTT----GGGCE-EEEEESCCCC---------EEEETTE-EEEEEESCCHHHHHHHHHHCCE
T ss_pred --cCHHHHHHHHHHHHHhCCC----CCceE-EEEEcCCchh---------hhcCCcC-cEEEcCCCCHHHHHHHHHhCCE
Confidence 6779999999988532210 01378 5889988754 3467766 899999 46899999999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 003758 195 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 274 (797)
Q Consensus 195 ~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aR 274 (797)
+|+||..| +||++++||||||+|||++ .+|..|++.++.+|++++++|+++|+++|..+++|+++ +++ +++
T Consensus 318 ~v~pS~~E--~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~---~~~---~~~ 388 (413)
T 2x0d_A 318 GISLMISP--HPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNN---RDV---DKK 388 (413)
T ss_dssp EECCCSSS--SCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-------------
T ss_pred EEEecCCC--CCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHH---HHH---hHH
Confidence 99999998 9999999999999999995 56778999999999999999999999999999999987 444 566
Q ss_pred HHHHHhcHHHHH
Q 003758 275 LHAKNMLALDCV 286 (797)
Q Consensus 275 k~ak~~~s~e~i 286 (797)
+.+..+.|..++
T Consensus 389 ~~~~~~~W~~~~ 400 (413)
T 2x0d_A 389 ESSNMMFYINEF 400 (413)
T ss_dssp CCBSCGGGCCCC
T ss_pred HHHHhCCHHHHH
Confidence 666666555553
No 20
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.85 E-value=6.3e-21 Score=185.82 Aligned_cols=146 Identities=16% Similarity=0.100 Sum_probs=130.3
Q ss_pred HcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHH--HcCCC
Q 003758 95 ENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS--RLGLL 172 (797)
Q Consensus 95 klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~--elgL~ 172 (797)
.+.++.++++|+++|++... |+++.+++++..+ ++++ ++++|.++.. +.++++++ .+++.
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~----Kg~~~li~a~~~l-----------~~~~-l~i~G~~~~~--~~l~~~~~~~~~~l~ 77 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPE----KRIELQLEVFKKL-----------QDEK-LYIVGWFSKG--DHAERYARKIMKIAP 77 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGG----GTHHHHHHHHHHC-----------TTSC-EEEEBCCCTT--STHHHHHHHHHHHSC
T ss_pred ccccCCCCCEEEEEeccccc----cCHHHHHHHHHhC-----------CCcE-EEEEecCccH--HHHHHHHHhhhcccC
Confidence 45678888899999998876 6669999999766 5678 5889998876 78888888 78888
Q ss_pred CCeEEEecC--hhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEEcCCCHHHHH
Q 003758 173 EHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLS 250 (797)
Q Consensus 173 d~~V~flG~--~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLA 250 (797)
+ +|+++|. .+++..+|+.||++|+||..| +||++++|||++|+|||+++.+++.+++.++.+|+++ ++|+++++
T Consensus 78 ~-~v~~~g~~~~~e~~~~~~~adi~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 78 D-NVKFLGSVSEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp T-TEEEEESCCHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred C-cEEEeCCCCHHHHHHHHHhCCEEEeCCCcC--CCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 7 8999994 466999999999999999988 9999999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHhCccc
Q 003758 251 RAFSLFISNGKL 262 (797)
Q Consensus 251 eaI~~LLedpel 262 (797)
++|..++++++.
T Consensus 154 ~~i~~l~~~~~~ 165 (177)
T 2f9f_A 154 DAMKKVSKNPDK 165 (177)
T ss_dssp HHHHHHHHCTTT
T ss_pred HHHHHHHhCHHH
Confidence 999999999875
No 21
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.84 E-value=5.4e-21 Score=210.79 Aligned_cols=225 Identities=15% Similarity=0.168 Sum_probs=165.4
Q ss_pred CCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHhhCCCCCCEEEeCCCCCCchhhhhcccc
Q 003758 7 SIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKS 86 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~~gld~~ki~VIPnsGVDvw~ae~F~~s 86 (797)
++|+|+++|.......... . ..+....+..++++|.|++.+........... ++.+||| |||. +.|.+.
T Consensus 146 ~~p~v~~~h~~~~~~~~~~--~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~--~i~vipn-gvd~---~~f~~~ 214 (406)
T 2hy7_A 146 NPAAKLVYRASDGLSTINV--A---SYIEREFDRVAPTLDVIALVSPAMAAEVVSRD--NVFHVGH-GVDH---NLDQLG 214 (406)
T ss_dssp CTTSEEEEEESSCHHHHTC--C---HHHHHHHHHHGGGCSEEEESCGGGGGGCSCST--TEEECCC-CBCT---THHHHH
T ss_pred CCCEEEEEeccchhhcccc--c---HHHHHHHHHHHHhCCEEEEcCHHHHHHHHhcC--CEEEEcC-CcCh---HhcCcc
Confidence 6899999996433111111 1 11222345678999999999877665543332 8999998 9997 554321
Q ss_pred hhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHH
Q 003758 87 HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 166 (797)
Q Consensus 87 ~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela 166 (797)
.. ....+.++|+++|++...|| + +.++ . +..++++ ++|+|+|+ +
T Consensus 215 ~~--------~~~~~~~~i~~vGrl~~~Kg----~---~~~l---~-------~~~~~~~-l~ivG~g~----------~ 258 (406)
T 2hy7_A 215 DP--------SPYAEGIHAVAVGSMLFDPE----F---FVVA---S-------KAFPQVT-FHVIGSGM----------G 258 (406)
T ss_dssp CS--------CSCCSSEEEEEECCTTBCHH----H---HHHH---H-------HHCTTEE-EEEESCSS----------C
T ss_pred cc--------cccCCCcEEEEEeccccccC----H---HHHH---H-------HhCCCeE-EEEEeCch----------H
Confidence 10 01123389999999987743 3 2222 1 2247899 58889876 3
Q ss_pred HHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHH-------HhCCcEEEcCCCChhHhhhcCCe
Q 003758 167 SRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAM-------TFGIPVITPDFPIIKEYVAEGAQ 237 (797)
Q Consensus 167 ~elgL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAM-------A~G~PVIasd~gGi~EiI~Dg~n 237 (797)
+++++.+ +|+|+| +.+++..+|+.||++|+||..| |||++++||| |||+|||+++. +.++.+
T Consensus 259 ~~~~l~~-~V~f~G~~~~~~l~~~~~~adv~v~ps~~E--~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~ 329 (406)
T 2hy7_A 259 RHPGYGD-NVIVYGEMKHAQTIGYIKHARFGIAPYASE--QVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYK 329 (406)
T ss_dssp CCTTCCT-TEEEECCCCHHHHHHHHHTCSEEECCBSCS--CCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCS
T ss_pred HhcCCCC-CEEEcCCCCHHHHHHHHHhcCEEEECCCcc--cCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcc
Confidence 4667777 899999 4578999999999999999998 9999999999 99999999987 677888
Q ss_pred EEE-EcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHH--HHHHhcC
Q 003758 238 VIF-FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARI--LENVLNF 299 (797)
Q Consensus 238 G~L-fd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kL--Le~lL~~ 299 (797)
|++ ++++|+++|+++|..++++++. ..++++.|..+++++.++ |+++...
T Consensus 330 G~l~v~~~d~~~la~ai~~ll~~~~~------------~~~~~~sw~~~a~~~~~~~~y~~~~~~ 382 (406)
T 2hy7_A 330 SRFGYTPGNADSVIAAITQALEAPRV------------RYRQCLNWSDTTDRVLDPRAYPETRLY 382 (406)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHCCCC------------CCSCCCBHHHHHHHHHCGGGSGGGBSS
T ss_pred eEEEeCCCCHHHHHHHHHHHHhCcch------------hhhhcCCHHHHHHHHHHhhcccccCcC
Confidence 999 9999999999999999998861 224456666668899999 8876653
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=8e-20 Score=194.44 Aligned_cols=230 Identities=15% Similarity=0.129 Sum_probs=174.1
Q ss_pred CCCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHHhhCCCCCCEEEeCCCCCCchhhhhccc
Q 003758 6 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK 85 (797)
Q Consensus 6 ~~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i~~gld~~ki~VIPnsGVDvw~ae~F~~ 85 (797)
.++|+|++.|+.... ... +.....+|.+++++... ++ ++.+||+ |+|. ..|..
T Consensus 118 ~~~p~v~~~~~~~~~-------------~~~--~~~~~~~d~v~~~~~~~------~~--~~~~i~n-~v~~---~~~~~ 170 (364)
T 1f0k_A 118 LGIPVVLHEQNGIAG-------------LTN--KWLAKIATKVMQAFPGA------FP--NAEVVGN-PVRT---DVLAL 170 (364)
T ss_dssp TTCCEEEEECSSSCC-------------HHH--HHHTTTCSEEEESSTTS------SS--SCEECCC-CCCH---HHHTS
T ss_pred cCCCEEEEecCCCCc-------------HHH--HHHHHhCCEEEecChhh------cC--CceEeCC-ccch---hhccc
Confidence 468999888863210 011 12456789988875443 22 5779998 8986 44433
Q ss_pred chhHHHHHHHcCCCCCCEEEEEE-ccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHH
Q 003758 86 SHEKYQLRKENGFLKDEIVVVVV-GSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 164 (797)
Q Consensus 86 s~~k~slR~klGL~~d~~vIL~V-Grl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Lee 164 (797)
.. .+.+++++.+.++++++ |++... |+.+.+++|+..+. + ++++++++|+++. +.+++
T Consensus 171 ~~----~~~~~~~~~~~~~il~~~g~~~~~----k~~~~li~a~~~l~-------~---~~~~l~i~G~~~~---~~l~~ 229 (364)
T 1f0k_A 171 PL----PQQRLAGREGPVRVLVVGGSQGAR----ILNQTMPQVAAKLG-------D---SVTIWHQSGKGSQ---QSVEQ 229 (364)
T ss_dssp CC----HHHHHTTCCSSEEEEEECTTTCCH----HHHHHHHHHHHHHG-------G---GEEEEEECCTTCH---HHHHH
T ss_pred ch----hhhhcccCCCCcEEEEEcCchHhH----HHHHHHHHHHHHhc-------C---CcEEEEEcCCchH---HHHHH
Confidence 21 24567777776655554 565544 66788999998772 1 5776678898872 78888
Q ss_pred HHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChh--------HhhhcCC
Q 003758 165 VASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK--------EYVAEGA 236 (797)
Q Consensus 165 la~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~--------EiI~Dg~ 236 (797)
.+++++++ +|++.|..+++..+|+.||++|+|| | |++++|||++|+|||+++.+|++ +++.++.
T Consensus 230 ~~~~~~~~--~v~~~g~~~~~~~~~~~ad~~v~~s-----g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~ 301 (364)
T 1f0k_A 230 AYAEAGQP--QHKVTEFIDDMAAAYAWADVVVCRS-----G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGA 301 (364)
T ss_dssp HHHHTTCT--TSEEESCCSCHHHHHHHCSEEEECC-----C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTS
T ss_pred HHhhcCCC--ceEEecchhhHHHHHHhCCEEEECC-----c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCc
Confidence 88888875 5999998889999999999999998 4 89999999999999999999754 5666665
Q ss_pred eEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHh
Q 003758 237 QVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVL 297 (797)
Q Consensus 237 nG~Lfd~~D--~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL 297 (797)
|++++++| +++|+++|..+ |++. +.++++++++.++.+.+..+++.|.++|++..
T Consensus 302 -g~~~~~~d~~~~~la~~i~~l--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 302 -AKIIEQPQLSVDAVANTLAGW--SRET---LLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -EEECCGGGCCHHHHHHHHHTC--CHHH---HHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -EEEeccccCCHHHHHHHHHhc--CHHH---HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 99999988 99999999999 7776 88999999999886666666889999987654
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.82 E-value=4.1e-20 Score=197.08 Aligned_cols=217 Identities=11% Similarity=0.056 Sum_probs=155.9
Q ss_pred hccCEEEecCCchHHH--hhCCCCCCEEEeCCCC-CCchhhhhcccch-hHHHHHHHcCCCCCCEEEEEEcccccccccc
Q 003758 43 SRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSP-ADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELS 118 (797)
Q Consensus 43 ~~AD~VV~ps~~l~~i--~~gld~~ki~VIPnsG-VDvw~ae~F~~s~-~k~slR~klGL~~d~~vIL~VGrl~~~KGl~ 118 (797)
..+|.+++++...... ..|++++++.+||| | +|. ..+.... ....++.++ +.++++++++|++... .
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n-~~~d~---~~~~~~~~~~~~~~~~~--~~~~~vl~~~gr~~~~---~ 219 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKENKDESRIFITGN-TAIDA---LKTTVKETYSHPVLEKL--GNNRLVLMTAHRRENL---G 219 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHTTCCGGGEEECCC-HHHHH---HHHHCCSSCCCHHHHTT--TTSEEEEEECCCGGGT---T
T ss_pred hhhheeeCCCHHHHHHHHHcCCCcccEEEECC-hhHhh---hhhhhhhhhhHHHHHhc--cCCCeEEEEecccccc---h
Confidence 3489999887655443 34777789999998 6 776 3332211 122344444 4455677788875543 1
Q ss_pred ccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHc-CCCCCeEEEec--ChhhHHHHHHHcCEE
Q 003758 119 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYG--FNGDVNGVLLMADIV 195 (797)
Q Consensus 119 Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~el-gL~d~~V~flG--~~edl~~~L~aADV~ 195 (797)
|++..+++|+..+.. ..+++++ + +|.+++ ..+.+.++++ +..+ +|+|+| ...++..+|+.||++
T Consensus 220 K~~~~li~a~~~l~~-------~~~~~~~-i-~~~g~~---~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~ 286 (375)
T 3beo_A 220 EPMRNMFRAIKRLVD-------KHEDVQV-V-YPVHMN---PVVRETANDILGDYG-RIHLIEPLDVIDFHNVAARSYLM 286 (375)
T ss_dssp HHHHHHHHHHHHHHH-------HCTTEEE-E-EECCSC---HHHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHHHHHh-------hCCCeEE-E-EeCCCC---HHHHHHHHHHhhccC-CEEEeCCCCHHHHHHHHHhCcEE
Confidence 677999999988743 2467773 4 365653 3444444443 3334 799977 345899999999999
Q ss_pred EEccCCCCCCccHHHHHHHHhCCcEEEcC-CCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 003758 196 LYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 274 (797)
Q Consensus 196 V~PS~~Ee~GFPlvLLEAMA~G~PVIasd-~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aR 274 (797)
|+|| |.+++|||++|+|||+++ .++.++++.++ +|+++++ |+++|+++|..+++|++. +++|+++++
T Consensus 287 v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~~~---~~~~~~~~~ 354 (375)
T 3beo_A 287 LTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFSLADELLSDKEA---HDKMSKASN 354 (375)
T ss_dssp EECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCHHH---HHHHCCCCC
T ss_pred EECC-------CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHHHHHHHHhChHh---HhhhhhcCC
Confidence 9998 466999999999999996 48999999988 8999986 999999999999999987 788988888
Q ss_pred HHHHHhcHHHHHHHHHHHH
Q 003758 275 LHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 275 k~ak~~~s~e~i~~Y~kLL 293 (797)
+++..+.+..+++.+.+++
T Consensus 355 ~~~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 355 PYGDGRASERIVEAILKHF 373 (375)
T ss_dssp TTCCSCHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHHHh
Confidence 7765544445566666554
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.82 E-value=2.1e-20 Score=200.41 Aligned_cols=255 Identities=10% Similarity=0.072 Sum_probs=170.9
Q ss_pred CCCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHH-HHhccCEEEecCCchHHH--hhCCCCCCEEEeCCCCC-Cchhhh
Q 003758 6 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS-VFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPA-DVWAVE 81 (797)
Q Consensus 6 ~~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~-~~~~AD~VV~ps~~l~~i--~~gld~~ki~VIPnsGV-Dvw~ae 81 (797)
.++|+|++.|..........+. ... .+. ..+.+|.+++++...... ..|++.+++.++|| |+ |. .
T Consensus 109 ~~ip~v~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n-~~~d~---~ 177 (384)
T 1vgv_A 109 QRIPVGHVEAGLRTGDLYSPWP----EEA---NRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGN-TVIDA---L 177 (384)
T ss_dssp TTCCEEEESCCCCCSCTTSSTT----HHH---HHHHHHTTCSEEEESSHHHHHHHHHTTCCGGGEEECCC-HHHHH---H
T ss_pred HCCCEEEEecccccccccCCCc----hHh---hHHHHHhhccEEEcCcHHHHHHHHHcCCChhhEEEeCC-hHHHH---H
Confidence 4799999888642111000000 111 111 235599999987654433 35777788999998 63 43 1
Q ss_pred hcccch------hHHHHHHHcC-CCC-CCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeC
Q 003758 82 AYSKSH------EKYQLRKENG-FLK-DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN 153 (797)
Q Consensus 82 ~F~~s~------~k~slR~klG-L~~-d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~ 153 (797)
.+.... ....+++++| ++. ++++++++|++... .|++..+++|+..+.. ..+++++++++|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~---~kg~~~li~a~~~l~~-------~~~~~~l~i~~g~ 247 (384)
T 1vgv_A 178 LWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESF---GRGFEEICHALADIAT-------THQDIQIVYPVHL 247 (384)
T ss_dssp HHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSC---CHHHHHHHHHHHHHHH-------HCTTEEEEEECCB
T ss_pred HhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCcccc---chHHHHHHHHHHHHHh-------hCCCeEEEEEcCC
Confidence 111110 1125677788 754 44678889986544 1677999999988753 2467885333353
Q ss_pred CCCCCHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCC-CChhH
Q 003758 154 STDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF-PIIKE 230 (797)
Q Consensus 154 g~~~Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~-gGi~E 230 (797)
++ .+.+.+++++ +..+ +|+|+| ..+++..+|+.||++|+|| . + +++|||++|+|||+++. ++.++
T Consensus 248 ~~-~~~~~l~~~~---~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~~S--g--~---~~lEA~a~G~PvI~~~~~~~~~e 315 (384)
T 1vgv_A 248 NP-NVREPVNRIL---GHVK-NVILIDPQEYLPFVWLMNHAWLILTDS--G--G---IQEEAPSLGKPVLVMRDTTERPE 315 (384)
T ss_dssp CH-HHHHHHHHHH---TTCT-TEEEECCCCHHHHHHHHHHCSEEEESS--S--T---GGGTGGGGTCCEEEESSCCSCHH
T ss_pred CH-HHHHHHHHHh---hcCC-CEEEeCCCCHHHHHHHHHhCcEEEECC--c--c---hHHHHHHcCCCEEEccCCCCcch
Confidence 32 1224444433 3233 799976 3478999999999999998 2 3 37999999999999986 89999
Q ss_pred hhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 231 YVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 231 iI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
++.++ +|+++++ |+++|+++|..+++|++. +++|++++++++..+.+..+++.+.++|+++++
T Consensus 316 ~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 316 AVTAG-TVRLVGT-DKQRIVEEVTRLLKDENE---YQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHT-SEEEECS-SHHHHHHHHHHHHHCHHH---HHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred hhhCC-ceEEeCC-CHHHHHHHHHHHHhChHH---HhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 99988 8999987 999999999999999987 788998888776555455556677766655443
No 25
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.80 E-value=2.2e-19 Score=203.63 Aligned_cols=198 Identities=11% Similarity=0.061 Sum_probs=158.9
Q ss_pred CCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCC
Q 003758 65 GNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 144 (797)
Q Consensus 65 ~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pd 144 (797)
+++.+||| ++.. ............|+++|++.+.+ ++++|++.. |+. +.+++++..+.. ..++
T Consensus 344 ~~i~~ipn-~~~~---~~~~~~~~~~~~r~~~~~~~~~~-v~~~g~~~~-K~~----~~li~a~~~l~~-------~~~~ 406 (568)
T 2vsy_A 344 EHVLRLQG-AFQP---SDTSRVVAEPPSRTQCGLPEQGV-VLCCFNNSY-KLN----PQSMARMLAVLR-------EVPD 406 (568)
T ss_dssp SEEEECSS-CSCC---CCTTCCCCCCCCTGGGTCCTTSC-EEEECCCGG-GCC----HHHHHHHHHHHH-------HCTT
T ss_pred ceeEcCCC-cCCC---CCCCCCCCCCCCccccCCCCCCE-EEEeCCccc-cCC----HHHHHHHHHHHH-------hCCC
Confidence 67888987 4433 11111111223577889887765 458898765 555 999999988853 3478
Q ss_pred cEEEEEEe-CCCCCCHHHHHHHHHHcCCC-CCeEEEecCh--hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 145 FKFVFLCG-NSTDGYNDALQEVASRLGLL-EHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 145 vkfLIIvG-~g~~~Y~e~Leela~elgL~-d~~V~flG~~--edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++ ++|+| +|+.. +.+++.++++|+. + +|+|+|.. +++..+|+.||++|+||.+ |||++++|||+||+||
T Consensus 407 ~~-l~i~G~~g~~~--~~l~~~~~~~~l~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pv 479 (568)
T 2vsy_A 407 SV-LWLLSGPGEAD--ARLRAFAHAQGVDAQ-RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPV 479 (568)
T ss_dssp CE-EEEECCSTTHH--HHHHHHHHHTTCCGG-GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCE
T ss_pred cE-EEEecCCHHHH--HHHHHHHHHcCCChh-HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCE
Confidence 88 58888 77654 8999999999997 6 89999954 6899999999999999987 8999999999999999
Q ss_pred EE-------cCCC-------ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH---HHhcHH
Q 003758 221 IT-------PDFP-------IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA---KNMLAL 283 (797)
Q Consensus 221 Ia-------sd~g-------Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~a---k~~~s~ 283 (797)
|+ ++.+ |++|+|.+ |+++++++|..+++|++. +..+++++++.+ ..+.+.
T Consensus 480 v~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~f~~~ 546 (568)
T 2vsy_A 480 LTTPGETFAARVAGSLNHHLGLDEMNVA----------DDAAFVAKAVALASDPAA---LTALHARVDVLRRASGVFHMD 546 (568)
T ss_dssp EBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHSSTTCHH
T ss_pred EeccCCCchHHHHHHHHHHCCChhhhcC----------CHHHHHHHHHHHhcCHHH---HHHHHHHHHHhhhcCCCCCHH
Confidence 99 9999 99998855 899999999999999987 889999999998 445555
Q ss_pred HHHHHHHHHHHHHhcC
Q 003758 284 DCVTRYARILENVLNF 299 (797)
Q Consensus 284 e~i~~Y~kLLe~lL~~ 299 (797)
.+++.|.++|++++..
T Consensus 547 ~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 547 GFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5588999999998863
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.78 E-value=1.5e-17 Score=189.22 Aligned_cols=236 Identities=13% Similarity=-0.015 Sum_probs=174.0
Q ss_pred HHHHHHhccCEEEecCCchHHH--------hhCCCC-------------CCEEEeCCCCCCchhhhhcccchh--HHHHH
Q 003758 37 YWKSVFSRVNVIVFPDYTLPML--------YSVLDA-------------GNFFVIPGSPADVWAVEAYSKSHE--KYQLR 93 (797)
Q Consensus 37 ~~~~~~~~AD~VV~ps~~l~~i--------~~gld~-------------~ki~VIPnsGVDvw~ae~F~~s~~--k~slR 93 (797)
.....+-.+|.|.|.+.....- ..|.+. .++.++|+ |||. +.|.+... ...++
T Consensus 200 ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~-GID~---~~f~~~~~~~~~~lr 275 (496)
T 3t5t_A 200 GILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPL-GYSP---LTLDGRNPQLPEGIE 275 (496)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCC-CBCG---GGC----CCCCTTHH
T ss_pred HHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEecc-EeCH---HHhchhhHHHHHHHH
Confidence 3456788999999987533211 113221 25778997 9998 77754321 24577
Q ss_pred HHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeC-----CCC--CCHHHHHHHH
Q 003758 94 KENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN-----STD--GYNDALQEVA 166 (797)
Q Consensus 94 ~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~-----g~~--~Y~e~Leela 166 (797)
++++ ++++|++||++... ||+..+++|+ .++...+.. . ++.+ +++|. ++. .+...+++++
T Consensus 276 ~~~~---~~~lIl~VgRLd~~----KGi~~lL~Af-~ll~~~P~~---~-~v~L-v~Vg~psr~~~~~y~~l~~~l~~lv 342 (496)
T 3t5t_A 276 EWAD---GHRLVVHSGRTDPI----KNAERAVRAF-VLAARGGGL---E-KTRM-LVRMNPNRLYVPANADYVHRVETAV 342 (496)
T ss_dssp HHHT---TSEEEEEEEESSGG----GCHHHHHHHH-HHHHHTSSC---T-TEEE-EEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred HHhC---CceEEEEcccCccc----cCHHHHHHHH-HHHHhCccc---c-eEEE-EEEECCCCCCchHHHHHHHHHHHHH
Confidence 7776 57899999998877 5669999999 887655421 2 4664 44542 211 1134455555
Q ss_pred HHc----CCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhC---CcEEEcCCCChhHhhhcCCe
Q 003758 167 SRL----GLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG---IPVITPDFPIIKEYVAEGAQ 237 (797)
Q Consensus 167 ~el----gL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G---~PVIasd~gGi~EiI~Dg~n 237 (797)
.+. |.. .|+|+| +.+++..+|+.|||+|+||..| |||++.+|||||| .|+|+|+.+|..+.+.+ +
T Consensus 343 ~~in~~~g~~--~V~f~g~v~~~el~aly~~ADv~vv~SlrE--GfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~~--~ 416 (496)
T 3t5t_A 343 AEANAELGSD--TVRIDNDNDVNHTIACFRRADLLIFNSTVD--GQNLSTFEAPLVNERDADVILSETCGAAEVLGE--Y 416 (496)
T ss_dssp HHHHHHHCTT--SEEEEECCCHHHHHHHHHHCSEEEECCSSB--SCCSHHHHHHHHCSSCCEEEEETTBTTHHHHGG--G
T ss_pred HHhccccCCc--CEEEeCCCCHHHHHHHHHhccEEEECcccc--cCChhHHHHHHhCCCCCCEEEeCCCCCHHHhCC--C
Confidence 443 222 488888 5788999999999999999999 9999999999997 89999999999998853 5
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHh
Q 003758 238 VIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVL 297 (797)
Q Consensus 238 G~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL 297 (797)
|++++|.|+++++++|..++.++. ++++.+.++.++++.++....-++.+++-+....
T Consensus 417 allVnP~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 417 CRSVNPFDLVEQAEAISAALAAGP--RQRAEAAARRRDAARPWTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp SEEECTTBHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcc
Confidence 899999999999999999999875 3478888899999999877777887777776653
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.77 E-value=2.3e-18 Score=188.14 Aligned_cols=206 Identities=14% Similarity=0.084 Sum_probs=156.9
Q ss_pred HHHHHhccCEEEecCCchHHHh--hCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCCCCEEEEEEccccccc
Q 003758 38 WKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYN 115 (797)
Q Consensus 38 ~~~~~~~AD~VV~ps~~l~~i~--~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~d~~vIL~VGrl~~~K 115 (797)
++..++.+|.|++++....... .|++ ++.+|||..++. .... +. .+ ..++++++|+ .
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~g~~--ki~vi~n~~f~~--------~~~~---~~--~l--~~~vi~~~~~---~- 205 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLKFIC--------QKGK---GI--KL--KGEFIVAGSI---H- 205 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTTTCC--SEEECCCGGGCC--------CCCS---CC--CC--SSCEEEEEEE---C-
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHcCCC--eEEEcCCCccCC--------CcCh---hh--hh--cCCEEEEEeC---C-
Confidence 4556889999999987665543 3555 899999821221 1000 11 11 1245665553 1
Q ss_pred cccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCC--------CCeEEEecChhhHHH
Q 003758 116 ELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL--------EHSVRHYGFNGDVNG 187 (797)
Q Consensus 116 Gl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~--------d~~V~flG~~edl~~ 187 (797)
.|+.+.+++|+..+. +..++++ ++|+|.++.. .+.++++++++|+. . +|.+.|..+++..
T Consensus 206 --~k~~~~ll~A~~~l~-------~~~p~~~-lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~-~v~~~~~~~dl~~ 273 (374)
T 2xci_A 206 --TGEVEIILKAFKEIK-------KTYSSLK-LILVPRHIEN-AKIFEKKARDFGFKTSFFENLEG-DVILVDRFGILKE 273 (374)
T ss_dssp --GGGHHHHHHHHHHHH-------TTCTTCE-EEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCS-SEEECCSSSCHHH
T ss_pred --CchHHHHHHHHHHHH-------hhCCCcE-EEEECCCHHH-HHHHHHHHHHCCCceEEecCCCC-cEEEECCHHHHHH
Confidence 267899999998873 4467899 5888988764 34788999998886 3 5888888889999
Q ss_pred HHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEc-CCCChhHhhhcC-CeEEEEcCCCHHHHHHHHHHHHhCcccHHH
Q 003758 188 VLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGKLSKF 265 (797)
Q Consensus 188 ~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIas-d~gGi~EiI~Dg-~nG~Lfd~~D~eeLAeaI~~LLedpel~~~ 265 (797)
+|+.||++++||..++ ++|.+++||||||+|||++ +.++.+|++.+. .+|++++++|+++|+++|..+++| ++
T Consensus 274 ~y~~aDv~vl~ss~~e-~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~--- 348 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVN-IGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KK--- 348 (374)
T ss_dssp HGGGEEEEEECSSSSS-SCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CC---
T ss_pred HHHhCCEEEECCcccC-CCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HH---
Confidence 9999999888876643 7889999999999999974 788999988763 468888889999999999999999 88
Q ss_pred HHHHHHHHHHHHHHhc
Q 003758 266 ARTVASAGRLHAKNML 281 (797)
Q Consensus 266 r~~m~~~aRk~ak~~~ 281 (797)
+++|++++++++++.+
T Consensus 349 r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 349 EIKVEEKSREIKGCYL 364 (374)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 8899999999988763
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.67 E-value=4.2e-17 Score=174.84 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=146.4
Q ss_pred HhccCEEEecCCchHHH--hhCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCCCCEEEEEEccccccccccc
Q 003758 42 FSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 119 (797)
Q Consensus 42 ~~~AD~VV~ps~~l~~i--~~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~K 119 (797)
...+|.+++++...... ..|++++++.+++|.++|. ..+. ..+..++.++ +.++++++++|+.... |
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~---~~~~--~~~~~~~~~~--~~~~~vl~~~gr~~~~----k 212 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDA---VLLA--AKLGRLPEGL--PEGPYVTVTMHRRENW----P 212 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHH---HHHH--HHHCCCCTTC--CSSCEEEECCCCGGGG----G
T ss_pred HHHhceeeCCCHHHHHHHHHcCCCcceEEEECCchHHH---Hhhh--hhhhHHHHhc--CCCCEEEEEeCcccch----H
Confidence 34588998887654433 3477778899999833443 1110 0011122222 3455677778876433 4
Q ss_pred cHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEE
Q 003758 120 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLY 197 (797)
Q Consensus 120 n~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV~V~ 197 (797)
++..+++|+..+.. ..+++++++++|.++. ..+.+++++. ..+ +|+++| ...++..+|+.||++|+
T Consensus 213 ~~~~ll~a~~~l~~-------~~~~~~lv~~~g~~~~-~~~~l~~~~~---~~~-~v~~~g~~g~~~~~~~~~~ad~~v~ 280 (376)
T 1v4v_A 213 LLSDLAQALKRVAE-------AFPHLTFVYPVHLNPV-VREAVFPVLK---GVR-NFVLLDPLEYGSMAALMRASLLLVT 280 (376)
T ss_dssp GHHHHHHHHHHHHH-------HCTTSEEEEECCSCHH-HHHHHHHHHT---TCT-TEEEECCCCHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHh-------hCCCeEEEEECCCCHH-HHHHHHHHhc---cCC-CEEEECCCCHHHHHHHHHhCcEEEE
Confidence 77999999988743 2467885333475541 1245555443 233 799996 23489999999999999
Q ss_pred ccCCCCCCccHHHHHHHHhCCcEEEc-CCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 003758 198 GSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 276 (797)
Q Consensus 198 PS~~Ee~GFPlvLLEAMA~G~PVIas-d~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ 276 (797)
|| + | + ++|||++|+|||++ +.++..+++.++ +|++++ .|+++|+++|.++++|++. +++|+++++.
T Consensus 281 ~S--~--g--~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~la~~i~~ll~d~~~---~~~~~~~~~~- 347 (376)
T 1v4v_A 281 DS--G--G--L-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGVYRVVKGLLENPEE---LSRMRKAKNP- 347 (376)
T ss_dssp SC--H--H--H-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHHHHHHHHHHTCHHH---HHHHHHSCCS-
T ss_pred CC--c--C--H-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHHHHHHHHHHhChHh---hhhhcccCCC-
Confidence 98 4 3 3 78999999999987 578899988765 799886 5999999999999999876 7777764322
Q ss_pred HHHhcHHHHHHHHHHHHHHHhc
Q 003758 277 AKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 277 ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
+.....++++.+++.++++
T Consensus 348 ---~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 348 ---YGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp ---SCCSCHHHHHHHHHHHHTT
T ss_pred ---CCCChHHHHHHHHHHHHhc
Confidence 2222446677777777765
No 29
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.53 E-value=2.8e-13 Score=147.31 Aligned_cols=215 Identities=9% Similarity=-0.062 Sum_probs=149.3
Q ss_pred CCCEEEEEccchhhhhhhhhhhhhHHHHHHHHHHHHhccCEEEecCCchHHH--hhCCCCCCEEEeCCCCCCchhhhhcc
Q 003758 7 SIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYS 84 (797)
Q Consensus 7 ~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i--~~gld~~ki~VIPnsGVDvw~ae~F~ 84 (797)
++|+|..|||-... +... . ..+.......+++||.|++++...... ..|++..++.++++ .|. ..
T Consensus 102 ~~k~i~~ihDl~pl-~~~~--~---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~~G~~~~ki~~~~~--~~~---~~-- 168 (339)
T 3rhz_A 102 DIKIVLFIHDVVPL-MFSG--N---FYLMDRTIAYYNKADVVVAPSQKMIDKLRDFGMNVSKTVVQGM--WDH---PT-- 168 (339)
T ss_dssp SCEEEEEESCCHHH-HCGG--G---GGGHHHHHHHHTTCSEEEESCHHHHHHHHHTTCCCSEEEECCS--CCC---CC--
T ss_pred CCEEEEEecccHHh-hCcc--c---hhhHHHHHHHHHHCCEEEECCHHHHHHHHHcCCCcCceeecCC--CCc---cC--
Confidence 78999999995321 1111 1 122234556899999999998765544 46887677765553 121 10
Q ss_pred cchhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHH
Q 003758 85 KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 164 (797)
Q Consensus 85 ~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Lee 164 (797)
.. ....+.++++|+|+|++...+.+ ..+ .++++ ++++|+|+..
T Consensus 169 ~~--------~~~~~~~~~~i~yaG~l~k~~~L-----------~~l----------~~~~~-f~ivG~G~~~------- 211 (339)
T 3rhz_A 169 QA--------PMFPAGLKREIHFPGNPERFSFV-----------KEW----------KYDIP-LKVYTWQNVE------- 211 (339)
T ss_dssp CC--------CCCCCEEEEEEEECSCTTTCGGG-----------GGC----------CCSSC-EEEEESCCCC-------
T ss_pred cc--------cccccCCCcEEEEeCCcchhhHH-----------HhC----------CCCCe-EEEEeCCccc-------
Confidence 00 01233456899999997643211 111 26788 4899999863
Q ss_pred HHHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEc-cCCC----CCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCe
Q 003758 165 VASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYG-SSQV----EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQ 237 (797)
Q Consensus 165 la~elgL~d~~V~flG--~~edl~~~L~aADV~V~P-S~~E----e~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~n 237 (797)
.++ +|+|+| +.+++..+|+.+|+.++. +... ...+|.+++||||+|+|||+++.+++++++.++.+
T Consensus 212 -----~l~--nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~ 284 (339)
T 3rhz_A 212 -----LPQ--NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGL 284 (339)
T ss_dssp -----CCT--TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTC
T ss_pred -----CcC--CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCe
Confidence 233 699999 678999999988888875 1100 01469999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHH
Q 003758 238 VIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDC 285 (797)
Q Consensus 238 G~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~ 285 (797)
|++++ +.++++++|..+. ++. +++|++++++.+++..+...
T Consensus 285 G~~~~--~~~e~~~~i~~l~--~~~---~~~m~~na~~~a~~~~~~~f 325 (339)
T 3rhz_A 285 GWIVK--DVEEAIMKVKNVN--EDE---YIELVKNVRSFNPILRKGFF 325 (339)
T ss_dssp EEEES--SHHHHHHHHHHCC--HHH---HHHHHHHHHHHTHHHHTTHH
T ss_pred EEEeC--CHHHHHHHHHHhC--HHH---HHHHHHHHHHHHHHhhccHH
Confidence 99996 6889999998874 333 78899999888776544433
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.51 E-value=4.3e-14 Score=155.84 Aligned_cols=203 Identities=16% Similarity=0.134 Sum_probs=138.9
Q ss_pred hccCEEEecCCchHH--HhhCCCCCCEEEeCCCCCCchhhhhcccch--h----HHHHHHHcC-CCCCCEEEEEEc-ccc
Q 003758 43 SRVNVIVFPDYTLPM--LYSVLDAGNFFVIPGSPADVWAVEAYSKSH--E----KYQLRKENG-FLKDEIVVVVVG-SSF 112 (797)
Q Consensus 43 ~~AD~VV~ps~~l~~--i~~gld~~ki~VIPnsGVDvw~ae~F~~s~--~----k~slR~klG-L~~d~~vIL~VG-rl~ 112 (797)
..+|.+++++..... ...|++++++.+++|.++|. ..+.... . +..+++++| ++.++.++++.| +..
T Consensus 165 ~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~---~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~ 241 (396)
T 3dzc_A 165 ALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDA---LLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRE 241 (396)
T ss_dssp HTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBC
T ss_pred HhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHH---HHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcc
Confidence 567898888765433 35688888999998754554 2221111 0 256788899 455555555444 322
Q ss_pred ccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHH-cCCCCCeEEEecCh--hhHHHHH
Q 003758 113 FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVRHYGFN--GDVNGVL 189 (797)
Q Consensus 113 ~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~e-lgL~d~~V~flG~~--edl~~~L 189 (797)
.. -++...+++|+..+.. ..+++++++.+|.+ ..+++.+++ ++..+ +|+++++. .++..+|
T Consensus 242 ~~---~~~~~~ll~A~~~l~~-------~~~~~~~v~~~g~~-----~~~~~~l~~~~~~~~-~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 242 SF---GGGFERICQALITTAE-------QHPECQILYPVHLN-----PNVREPVNKLLKGVS-NIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp CC---TTHHHHHHHHHHHHHH-------HCTTEEEEEECCBC-----HHHHHHHHHHTTTCT-TEEEECCCCHHHHHHHH
T ss_pred cc---hhHHHHHHHHHHHHHH-------hCCCceEEEEeCCC-----hHHHHHHHHHHcCCC-CEEEeCCCCHHHHHHHH
Confidence 22 2456888888887743 34678854444643 223333333 34444 79998843 6888999
Q ss_pred HHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEc-CCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHH
Q 003758 190 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFART 268 (797)
Q Consensus 190 ~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIas-d~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~ 268 (797)
+.||++|.+| | |+ .+|||++|+|||++ +.++.++++.+|. +++++ .|+++|++++..+++|++. +++
T Consensus 306 ~~ad~vv~~S-----G-g~-~~EA~a~G~PvV~~~~~~~~~e~v~~G~-~~lv~-~d~~~l~~ai~~ll~d~~~---~~~ 373 (396)
T 3dzc_A 306 DRAHIILTDS-----G-GI-QEEAPSLGKPVLVMRETTERPEAVAAGT-VKLVG-TNQQQICDALSLLLTDPQA---YQA 373 (396)
T ss_dssp HHCSEEEESC-----S-GG-GTTGGGGTCCEEECCSSCSCHHHHHHTS-EEECT-TCHHHHHHHHHHHHHCHHH---HHH
T ss_pred HhcCEEEECC-----c-cH-HHHHHHcCCCEEEccCCCcchHHHHcCc-eEEcC-CCHHHHHHHHHHHHcCHHH---HHH
Confidence 9999999987 3 33 38999999999998 7888889998874 67765 4899999999999999987 777
Q ss_pred HHHHHHHH
Q 003758 269 VASAGRLH 276 (797)
Q Consensus 269 m~~~aRk~ 276 (797)
|++++..+
T Consensus 374 m~~~~~~~ 381 (396)
T 3dzc_A 374 MSQAHNPY 381 (396)
T ss_dssp HHTSCCTT
T ss_pred HhhccCCC
Confidence 87765443
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.44 E-value=2.5e-13 Score=150.27 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=142.8
Q ss_pred ccCEEEecCCchHH--HhhCCCCCCEEEeCCCCCCchhhhhcccch-hHHHHHHHcCCCCCCEEEEEEcccccccccccc
Q 003758 44 RVNVIVFPDYTLPM--LYSVLDAGNFFVIPGSPADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120 (797)
Q Consensus 44 ~AD~VV~ps~~l~~--i~~gld~~ki~VIPnsGVDvw~ae~F~~s~-~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn 120 (797)
.+|.+++++..... ...|++++++.++++.++|. ..+.... .....++++ +.++++++++|+.... -++
T Consensus 169 ~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~---~~~~~~~~~~~~~~~~l--~~~~~vlv~~~r~~~~---~~~ 240 (403)
T 3ot5_A 169 MADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDA---LKTTVQKDYHHPILENL--GDNRLILMTAHRRENL---GEP 240 (403)
T ss_dssp HCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHH---HHHHSCTTCCCHHHHSC--TTCEEEEECCCCHHHH---TTH
T ss_pred hcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHH---HHhhhhhhcchHHHHhc--cCCCEEEEEeCccccc---CcH
Confidence 36888888765433 35689889999998855664 2221110 112344444 3444445555542221 144
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHH-cCCCCCeEEEecCh--hhHHHHHHHcCEEEE
Q 003758 121 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVRHYGFN--GDVNGVLLMADIVLY 197 (797)
Q Consensus 121 ~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~e-lgL~d~~V~flG~~--edl~~~L~aADV~V~ 197 (797)
...+++|+..+.. ..++++|++.+|.+ ..+++.+++ ++..+ +|+++|+. .++..+|+.||++|.
T Consensus 241 l~~ll~a~~~l~~-------~~~~~~~v~~~~~~-----~~~~~~l~~~~~~~~-~v~l~~~l~~~~~~~l~~~ad~vv~ 307 (403)
T 3ot5_A 241 MQGMFEAVREIVE-------SREDTELVYPMHLN-----PAVREKAMAILGGHE-RIHLIEPLDAIDFHNFLRKSYLVFT 307 (403)
T ss_dssp HHHHHHHHHHHHH-------HCTTEEEEEECCSC-----HHHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHH-------hCCCceEEEecCCC-----HHHHHHHHHHhCCCC-CEEEeCCCCHHHHHHHHHhcCEEEE
Confidence 5788888887753 34678854434533 233444433 34444 79999954 589999999999998
Q ss_pred ccCCCCCCccHHHHHHHHhCCcEEEc-CCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 003758 198 GSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH 276 (797)
Q Consensus 198 PS~~Ee~GFPlvLLEAMA~G~PVIas-d~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ 276 (797)
+| |...+|||++|+|||+. +.++.++.+..| +|++++. |+++|++++..++++++. +++|+.++..+
T Consensus 308 ~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~~ai~~ll~~~~~---~~~m~~~~~~~ 375 (403)
T 3ot5_A 308 DS-------GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLIKEALDLLDNKES---HDKMAQAANPY 375 (403)
T ss_dssp CC-------HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHHHHHHHHHHCHHH---HHHHHHSCCTT
T ss_pred CC-------ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHHHHHHHHHcCHHH---HHHHHhhcCcc
Confidence 76 23338999999999998 678888988776 7888875 999999999999999986 67777665443
Q ss_pred HHHhcHHHHHHHHHHHHHHHhc
Q 003758 277 AKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 277 ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
... ...++..+++.+.+.
T Consensus 376 g~~----~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 376 GDG----FAANRILAAIKSHFE 393 (403)
T ss_dssp CCS----CHHHHHHHHHHHHHT
T ss_pred cCC----cHHHHHHHHHHHHhC
Confidence 322 334455555555555
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.25 E-value=2.7e-10 Score=123.95 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=131.8
Q ss_pred hccCEEEecCCchHHHhhCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCCCCCCEEEEEEc-cccccccccccH
Q 003758 43 SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG-SSFFYNELSWDY 121 (797)
Q Consensus 43 ~~AD~VV~ps~~l~~i~~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL~~d~~vIL~VG-rl~~~KGl~Kn~ 121 (797)
..++.|+..-... .....++.++.+ ++.. +.+... +...+++.++++++++| ++... +..
T Consensus 136 ~~a~~v~~~~~~~-----~~~~~k~~~~g~-pvr~---~~~~~~------~~~~~~~~~~~~ilv~gGs~g~~----~~~ 196 (365)
T 3s2u_A 136 PIARRVCEAFPDT-----FPASDKRLTTGN-PVRG---ELFLDA------HARAPLTGRRVNLLVLGGSLGAE----PLN 196 (365)
T ss_dssp GGCSEEEESSTTS-----SCC---CEECCC-CCCG---GGCCCT------TSSCCCTTSCCEEEECCTTTTCS----HHH
T ss_pred cccceeeeccccc-----ccCcCcEEEECC-CCch---hhccch------hhhcccCCCCcEEEEECCcCCcc----ccc
Confidence 4567776543221 122345556554 6654 333221 23456666666666654 43332 223
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCC
Q 003758 122 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 201 (797)
Q Consensus 122 ~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~ 201 (797)
..+.+++..+ ....++.+++++|.+. .+.+.+...+.+. ++.+.++.+++.++|+.||++|..
T Consensus 197 ~~~~~al~~l--------~~~~~~~vi~~~G~~~---~~~~~~~~~~~~~---~~~v~~f~~dm~~~l~~aDlvI~r--- 259 (365)
T 3s2u_A 197 KLLPEALAQV--------PLEIRPAIRHQAGRQH---AEITAERYRTVAV---EADVAPFISDMAAAYAWADLVICR--- 259 (365)
T ss_dssp HHHHHHHHTS--------CTTTCCEEEEECCTTT---HHHHHHHHHHTTC---CCEEESCCSCHHHHHHHCSEEEEC---
T ss_pred hhhHHHHHhc--------ccccceEEEEecCccc---cccccceeccccc---ccccccchhhhhhhhccceEEEec---
Confidence 4555555444 2234566555666543 3666666666654 477889889999999999999974
Q ss_pred CCCCccHHHHHHHHhCCcEEEcCCCC--------hhHhhhcCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHH
Q 003758 202 VEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVAS 271 (797)
Q Consensus 202 Ee~GFPlvLLEAMA~G~PVIasd~gG--------i~EiI~Dg~nG~Lfd~~--D~eeLAeaI~~LLedpel~~~r~~m~~ 271 (797)
+.+.++.|+|++|+|+|..+.+. ..+.+.+...|.+++.. +++.|+++|.++++|++. +++|++
T Consensus 260 ---aG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~---~~~m~~ 333 (365)
T 3s2u_A 260 ---AGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPET---LRSMAD 333 (365)
T ss_dssp ---CCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHH---HHHHHH
T ss_pred ---CCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHH---HHHHHH
Confidence 33789999999999999876653 23456666678888755 589999999999999987 899999
Q ss_pred HHHHHHHHhcHHHHHHHHHHH
Q 003758 272 AGRLHAKNMLALDCVTRYARI 292 (797)
Q Consensus 272 ~aRk~ak~~~s~e~i~~Y~kL 292 (797)
++++.+.......+++...++
T Consensus 334 ~a~~~~~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 334 QARSLAKPEATRTVVDACLEV 354 (365)
T ss_dssp HHHHTCCTTHHHHHHHHHHHH
T ss_pred HHHhcCCccHHHHHHHHHHHH
Confidence 999877665444444444444
No 33
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.24 E-value=4.4e-11 Score=129.41 Aligned_cols=163 Identities=15% Similarity=0.101 Sum_probs=121.9
Q ss_pred CCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEE
Q 003758 99 LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRH 178 (797)
Q Consensus 99 ~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~f 178 (797)
+...++++++|+.. . ++...+..++..+. + .++++++++|.+... +.++ .+.+ +|++
T Consensus 240 ~~~~~vlv~~G~~~-~----~~~~~~~~~~~~l~-------~--~~~~~~~~~g~~~~~--~~l~------~~~~-~v~~ 296 (412)
T 3otg_A 240 TARPLVYLTLGTSS-G----GTVEVLRAAIDGLA-------G--LDADVLVASGPSLDV--SGLG------EVPA-NVRL 296 (412)
T ss_dssp TTSCEEEEECTTTT-C----SCHHHHHHHHHHHH-------T--SSSEEEEECCSSCCC--TTCC------CCCT-TEEE
T ss_pred CCCCEEEEEcCCCC-c----CcHHHHHHHHHHHH-------c--CCCEEEEEECCCCCh--hhhc------cCCC-cEEE
Confidence 34456777888764 2 33455555554441 1 256766666665522 2222 2444 7999
Q ss_pred ecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhhcCCeEEEEcCC--CHHHHHHH
Q 003758 179 YGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRA 252 (797)
Q Consensus 179 lG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~Dg~nG~Lfd~~--D~eeLAea 252 (797)
.|.. ++..+|+.||++|.+| .+.+++|||++|+|+|+.+.++ +.+.+.+..+|++++++ |+++|+++
T Consensus 297 ~~~~-~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~a 369 (412)
T 3otg_A 297 ESWV-PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGA 369 (412)
T ss_dssp ESCC-CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHH
T ss_pred eCCC-CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHH
Confidence 9987 7999999999999754 3578999999999999977654 78888888899999877 89999999
Q ss_pred HHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 003758 253 FSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 294 (797)
Q Consensus 253 I~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe 294 (797)
|.++++|++. ++.+++.+++.+....+..+++.+.+++.
T Consensus 370 i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 370 AKRLLAEESY---RAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHCHHH---HHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred HHHHHhCHHH---HHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 9999999987 88899999999888877677777776654
No 34
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.19 E-value=8.7e-11 Score=129.56 Aligned_cols=201 Identities=11% Similarity=0.015 Sum_probs=132.8
Q ss_pred ccCEEEecCCchHH--HhhCCCCCCEEEeCCCCCCchhhhhcc-cchhHHHHHHHcCCCCCCEEEEEEcccccccccccc
Q 003758 44 RVNVIVFPDYTLPM--LYSVLDAGNFFVIPGSPADVWAVEAYS-KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120 (797)
Q Consensus 44 ~AD~VV~ps~~l~~--i~~gld~~ki~VIPnsGVDvw~ae~F~-~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn 120 (797)
-+|.+++++..... ...|+++++++++.|.++|. -.+. ....+..+++++|++.+++++++.|+.... +..++
T Consensus 146 ~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~---~~~~~~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~-~~~~~ 221 (385)
T 4hwg_A 146 ISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEV---LDRFMPKILKSDILDKLSLTPKQYFLISSHREENV-DVKNN 221 (385)
T ss_dssp HCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHH---HHHHHHHHHHCCHHHHTTCCTTSEEEEEECCC------CHH
T ss_pred hhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHH---HHHhhhhcchhHHHHHcCCCcCCEEEEEeCCchhc-CcHHH
Confidence 46788888755333 35689888999998755664 2221 112344577889998777666666653211 12255
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHc-C-C--CCCeEEEecC--hhhHHHHHHHcCE
Q 003758 121 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-G-L--LEHSVRHYGF--NGDVNGVLLMADI 194 (797)
Q Consensus 121 ~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~el-g-L--~d~~V~flG~--~edl~~~L~aADV 194 (797)
...+++|+..+... . ++.+ ++.. + ..+.+.+++. + + .+ +|+++++ ..++..+|+.||+
T Consensus 222 l~~ll~al~~l~~~-------~-~~~v-v~p~-~-----p~~~~~l~~~~~~~~~~~-~v~l~~~lg~~~~~~l~~~adl 285 (385)
T 4hwg_A 222 LKELLNSLQMLIKE-------Y-NFLI-IFST-H-----PRTKKRLEDLEGFKELGD-KIRFLPAFSFTDYVKLQMNAFC 285 (385)
T ss_dssp HHHHHHHHHHHHHH-------H-CCEE-EEEE-C-----HHHHHHHHTSGGGGGTGG-GEEECCCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHhc-------C-CeEE-EEEC-C-----hHHHHHHHHHHHHhcCCC-CEEEEcCCCHHHHHHHHHhCcE
Confidence 67888888877431 1 4564 3322 2 3355556554 3 2 23 7999874 4579999999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCcEEEcCCC-ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 003758 195 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 273 (797)
Q Consensus 195 ~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g-Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~a 273 (797)
+|.+| |.+..||+++|+|||+.+.. ..+|.+..| +++++. .|++++++++..+++|+.. +..|+.++
T Consensus 286 vvt~S-------Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~-~d~~~i~~ai~~ll~d~~~---~~~m~~~~ 353 (385)
T 4hwg_A 286 ILSDS-------GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSG-FKAERVLQAVKTITEEHDN---NKRTQGLV 353 (385)
T ss_dssp EEECC-------TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECC-SSHHHHHHHHHHHHTTCBT---TBCCSCCC
T ss_pred EEECC-------ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcC-CCHHHHHHHHHHHHhChHH---HHHhhccC
Confidence 99765 23579999999999997654 467888776 566664 4899999999999999876 44454444
Q ss_pred HHH
Q 003758 274 RLH 276 (797)
Q Consensus 274 Rk~ 276 (797)
..+
T Consensus 354 ~~~ 356 (385)
T 4hwg_A 354 PDY 356 (385)
T ss_dssp HHH
T ss_pred CCC
Confidence 433
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.16 E-value=9.2e-11 Score=128.22 Aligned_cols=162 Identities=14% Similarity=0.125 Sum_probs=110.1
Q ss_pred CCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEe
Q 003758 100 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~fl 179 (797)
.+.++++++|+.. .+ ....+..++..+ ...+++++++++|.++.. +.++ .+++ +|++.
T Consensus 231 ~~~~v~v~~Gs~~-~~----~~~~~~~~~~~l--------~~~~~~~~~~~~G~~~~~--~~l~------~~~~-~v~~~ 288 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TK----QPAFYRECVRAF--------GNLPGWHLVLQIGRKVTP--AELG------ELPD-NVEVH 288 (430)
T ss_dssp CSEEEEEECTTTC-C-----CHHHHHHHHHHH--------TTCTTEEEEEECC---CG--GGGC------SCCT-TEEEE
T ss_pred CCCeEEEEcCCCC-CC----cHHHHHHHHHHH--------hcCCCeEEEEEeCCCCCh--HHhc------cCCC-CeEEE
Confidence 3456788889866 21 122222222222 111467876788987653 3221 2444 79999
Q ss_pred cChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhhcCCeEEEEcCC--CHHHHHHHH
Q 003758 180 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAF 253 (797)
Q Consensus 180 G~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~Dg~nG~Lfd~~--D~eeLAeaI 253 (797)
|...+. .+|+.||++|..+ .+.+++|||++|+|+|+.+.++ +.+.+.+...|++++.+ ++++|+++|
T Consensus 289 ~~~~~~-~~l~~ad~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i 361 (430)
T 2iyf_A 289 DWVPQL-AILRQADLFVTHA------GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETA 361 (430)
T ss_dssp SSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHH
T ss_pred ecCCHH-HHhhccCEEEECC------CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHH
Confidence 976666 8999999999843 3478999999999999998764 56777777789999876 899999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 003758 254 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 254 ~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL 293 (797)
.++++|++. ++++++.+++......+..+++.+.+++
T Consensus 362 ~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 362 LALVDDPEV---ARRLRRIQAEMAQEGGTRRAADLIEAEL 398 (430)
T ss_dssp HHHHHCHHH---HHHHHHHHHHHHHHCHHHHHHHHHHTTS
T ss_pred HHHHcCHHH---HHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 999999876 7788888887776553333344444443
No 36
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.00 E-value=6.4e-10 Score=120.52 Aligned_cols=158 Identities=13% Similarity=0.080 Sum_probs=102.6
Q ss_pred CCCEEEEEEcccccccc------ccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 003758 100 KDEIVVVVVGSSFFYNE------LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE 173 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~KG------l~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d 173 (797)
..+.+++++|+....++ ..+....+++++..+ ++++ ++++.+... +.+. .+.+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~------------~~~~-v~~~~~~~~--~~l~------~~~~ 284 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL------------GFEV-VVAVSDKLA--QTLQ------PLPE 284 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG------------TCEE-EECCCC----------------CCT
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC------------CCEE-EEEeCCcch--hhhc------cCCC
Confidence 45667888898765432 223445555555322 4674 555544432 3332 2445
Q ss_pred CeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcCCeEEEEcCC--CHH
Q 003758 174 HSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD--NPE 247 (797)
Q Consensus 174 ~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~--D~e 247 (797)
+|++.|.. +...+|..||++|.. |.+.+++|||++|+|+|+.... +..+.+.+...|++++.+ +++
T Consensus 285 -~v~~~~~~-~~~~ll~~ad~~v~~------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 356 (398)
T 4fzr_A 285 -GVLAAGQF-PLSAIMPACDVVVHH------GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVE 356 (398)
T ss_dssp -TEEEESCC-CHHHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------
T ss_pred -cEEEeCcC-CHHHHHhhCCEEEec------CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHH
Confidence 79999976 689999999999973 5578999999999999995544 778888888899999876 789
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 003758 248 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 289 (797)
Q Consensus 248 eLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y 289 (797)
+|+++|.++++|++. ++++++.+++......+.++++.+
T Consensus 357 ~l~~ai~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l 395 (398)
T 4fzr_A 357 SVLAACARIRDDSSY---VGNARRLAAEMATLPTPADIVRLI 395 (398)
T ss_dssp CHHHHHHHHHHCTHH---HHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCHHH---HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999987 788888888887777666655543
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.96 E-value=1.4e-09 Score=117.19 Aligned_cols=161 Identities=12% Similarity=0.082 Sum_probs=110.5
Q ss_pred CCEEEEEEccccccccccccH-HHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEe
Q 003758 101 DEIVVVVVGSSFFYNELSWDY-AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179 (797)
Q Consensus 101 d~~vIL~VGrl~~~KGl~Kn~-~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~fl 179 (797)
...+++++|+....+ +. ..+++++... . ..+++++ ++++.+... +.+. ++.+ +|++.
T Consensus 218 ~~~vlv~~G~~~~~~----~~~~~~~~~~~~~-~-------~~p~~~~-v~~~~~~~~--~~l~------~~~~-~v~~~ 275 (391)
T 3tsa_A 218 ARRVCICMGRMVLNA----TGPAPLLRAVAAA-T-------ELPGVEA-VIAVPPEHR--ALLT------DLPD-NARIA 275 (391)
T ss_dssp SEEEEEECCHHHHHH----HCSHHHHHHHHHH-H-------TSTTEEE-EEECCGGGG--GGCT------TCCT-TEEEC
T ss_pred CCEEEEEcCCCCCcc----cchHHHHHHHHHh-c-------cCCCeEE-EEEECCcch--hhcc------cCCC-CEEEe
Confidence 445666678754321 11 3344444322 1 2357885 556554432 2221 3444 79999
Q ss_pred cChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCC----CChhHhhhcCCeEEEEcC----CCHHHHHH
Q 003758 180 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEGAQVIFFQK----DNPEGLSR 251 (797)
Q Consensus 180 G~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~----gGi~EiI~Dg~nG~Lfd~----~D~eeLAe 251 (797)
|.. +...++..||++|.. |.+.+++|||++|+|+|+... .+..+.+.+...|+++++ .++++|++
T Consensus 276 ~~~-~~~~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ 348 (391)
T 3tsa_A 276 ESV-PLNLFLRTCELVICA------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTD 348 (391)
T ss_dssp CSC-CGGGTGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHH
T ss_pred ccC-CHHHHHhhCCEEEeC------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHH
Confidence 964 345577999999973 556789999999999999544 357778888889999987 78999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 003758 252 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 252 aI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL 293 (797)
+|.++++|++. ++++++.+++......+.++++.+.+++
T Consensus 349 ai~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 349 SIATVLGDTGF---AAAAIKLSDEITAMPHPAALVRTLENTA 387 (391)
T ss_dssp HHHHHHTCTHH---HHHHHHHHHHHHTSCCHHHHHHHHHHC-
T ss_pred HHHHHHcCHHH---HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999987 7888888888877776666665554443
No 38
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.90 E-value=9.9e-09 Score=98.65 Aligned_cols=130 Identities=16% Similarity=0.125 Sum_probs=91.2
Q ss_pred CCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEe
Q 003758 100 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~fl 179 (797)
...++++++|+...... .+....+++++.. .++++++++| +... + .+++ +|++.
T Consensus 20 ~~~~vlv~~Gs~~~~~~-~~~~~~~~~al~~------------~~~~~~~~~g-~~~~--~---------~~~~-~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMT-EERANVIASALAQ------------IPQKVLWRFD-GNKP--D---------TLGL-NTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCTTCC-HHHHHHHHHHHTT------------SSSEEEEECC-SSCC--T---------TCCT-TEEEE
T ss_pred CCCEEEEECCCCcccCC-HHHHHHHHHHHHh------------CCCeEEEEEC-CcCc--c---------cCCC-cEEEe
Confidence 44678888998752111 1334555555521 1357544444 3321 1 3444 79999
Q ss_pred cChhhHHHHH--HHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcCCeEEEEcCC--CHHHHHH
Q 003758 180 GFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD--NPEGLSR 251 (797)
Q Consensus 180 G~~edl~~~L--~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~--D~eeLAe 251 (797)
|...+ ..++ ..||++|.. +.+.+++|||++|+|+|+.+.. +..+.+.+...|++++.. ++++|++
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~ 146 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLN 146 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred cCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHH
Confidence 96544 4566 899999973 4569999999999999999875 467778888889998866 7999999
Q ss_pred HHHHHHhCccc
Q 003758 252 AFSLFISNGKL 262 (797)
Q Consensus 252 aI~~LLedpel 262 (797)
+|..++.+++.
T Consensus 147 ~i~~ll~~~~~ 157 (170)
T 2o6l_A 147 ALKRVINDPSY 157 (170)
T ss_dssp HHHHHHHCHHH
T ss_pred HHHHHHcCHHH
Confidence 99999998865
No 39
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.86 E-value=7.1e-09 Score=111.26 Aligned_cols=132 Identities=17% Similarity=0.130 Sum_probs=98.5
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+++++++|.+... +.+. .+.+ +|++.|...+. .+|+.||++|..+ ...+++|||++|+|+|+..
T Consensus 261 ~~~~~~~g~~~~~--~~~~------~~~~-~v~~~~~~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 261 WHVVMAIGGFLDP--AVLG------PLPP-NVEAHQWIPFH-SVLAHARACLTHG------TTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp CEEEEECCTTSCG--GGGC------SCCT-TEEEESCCCHH-HHHTTEEEEEECC------CHHHHHHHHHTTCCEEECG
T ss_pred cEEEEEeCCcCCh--hhhC------CCCC-cEEEecCCCHH-HHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeC
Confidence 6766777866442 2222 2444 79999977666 9999999999854 3478899999999999654
Q ss_pred C-----CChhHhhhcCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 003758 225 F-----PIIKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 295 (797)
Q Consensus 225 ~-----gGi~EiI~Dg~nG~Lfd~~--D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~ 295 (797)
. .++.+.+.+...|.+++.+ ++++|++++.++++|++. ++++.+.+++..........++.+.+++..
T Consensus 325 ~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 325 HFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAV---RERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp GGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 4 3677888888889998766 899999999999999976 677777777766655445556666666543
No 40
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.84 E-value=1.3e-08 Score=118.52 Aligned_cols=181 Identities=9% Similarity=-0.016 Sum_probs=125.9
Q ss_pred HHHcCCCCC--CEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEE-EEEEeCCCCCCHHHHHHHHHHc
Q 003758 93 RKENGFLKD--EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKF-VFLCGNSTDGYNDALQEVASRL 169 (797)
Q Consensus 93 R~klGL~~d--~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkf-LIIvG~g~~~Y~e~Leela~el 169 (797)
+..++++.+ .++++.+++. . |....+++++.+++.+. |+..+ +++.|.+... ...+.+.+.+.
T Consensus 430 r~~~~lp~~~G~v~Fg~fn~~--~----Ki~p~~l~~WarIL~~v-------P~s~L~l~~~g~~~g~-~~~~~~~~~~~ 495 (631)
T 3q3e_A 430 KVDYLLRENPEVVNIGIASTT--M----KLNPYFLEALKAIRDRA-------KVKVHFHFALGQSNGI-THPYVERFIKS 495 (631)
T ss_dssp SCCCCCCSCCSEEEEEEEECS--T----TCCHHHHHHHHHHHHHC-------SSEEEEEEEESSCCGG-GHHHHHHHHHH
T ss_pred cccccCCcCCCeEEEEECCcc--c----cCCHHHHHHHHHHHHhC-------CCcEEEEEecCCCchh-hHHHHHHHHHc
Confidence 445677764 5666666653 2 55699999999987654 34332 2346743221 24444556677
Q ss_pred CCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhh------cCCeEE-E
Q 003758 170 GLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA------EGAQVI-F 240 (797)
Q Consensus 170 gL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~------Dg~nG~-L 240 (797)
|+.+ +|.|.| +..+....|+.+||++.|+.+ +.|++.+|||+||+|||+..-.....-+. -|..++ +
T Consensus 496 GI~~-Rv~F~g~~p~~e~la~y~~aDIfLDpfpy---~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI 571 (631)
T 3q3e_A 496 YLGD-SATAHPHSPYHQYLRILHNCDMMVNPFPF---GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI 571 (631)
T ss_dssp HHGG-GEEEECCCCHHHHHHHHHTCSEEECCSSS---CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE
T ss_pred CCCc-cEEEcCCCCHHHHHHHHhcCcEEEeCCcc---cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee
Confidence 8886 899999 567788999999999999876 45999999999999999987776665553 344443 4
Q ss_pred EcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH--hcHHHHHHHHHHHHHHHh
Q 003758 241 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN--MLALDCVTRYARILENVL 297 (797)
Q Consensus 241 fd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~--~~s~e~i~~Y~kLLe~lL 297 (797)
. .|.++++++...+..|++. +.++.++.++.... .|. ...+.|.++|+.+.
T Consensus 572 A--~d~eeYv~~Av~La~D~~~---l~~LR~~Lr~~~~~spLFd-~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 572 A--NTVDEYVERAVRLAENHQE---RLELRRYIIENNGLNTLFT-GDPRPMGQVFLEKL 624 (631)
T ss_dssp E--SSHHHHHHHHHHHHHCHHH---HHHHHHHHHHSCCHHHHTC-SCCTHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHhCCHHH---HHHHHHHHHHHhhhCCCcc-hhHHHHHHHHHHHH
Confidence 3 5799999999999999987 78887777766433 332 22445555555543
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.82 E-value=4.5e-08 Score=105.25 Aligned_cols=161 Identities=15% Similarity=0.107 Sum_probs=110.3
Q ss_pred CCCEEEEEEcccccc---ccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeE
Q 003758 100 KDEIVVVVVGSSFFY---NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSV 176 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~---KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V 176 (797)
+...+++++|+.... ++-.+....+++++.. .++++++++| ++. .+.+. . +++ +|
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g-~~~--~~~l~----~--~~~-~v 266 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAP-DTV--AEALR----A--EVP-QA 266 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECC-HHH--HHHHH----H--HCT-TS
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeC-CCC--HHhhC----C--CCC-ce
Confidence 345688889987654 2111445666666632 2467544444 221 12222 1 344 68
Q ss_pred EEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhhcCCeEEEEcCC--CHHHHH
Q 003758 177 RHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLS 250 (797)
Q Consensus 177 ~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~Dg~nG~Lfd~~--D~eeLA 250 (797)
.+ |.. +..++|..||++|.. |.+.+++|||++|+|+|+.+..+ +.+.+.+...|++++.+ ++++|+
T Consensus 267 ~~-~~~-~~~~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~ 338 (384)
T 2p6p_A 267 RV-GWT-PLDVVAPTCDLLVHH------AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIA 338 (384)
T ss_dssp EE-ECC-CHHHHGGGCSEEEEC------SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHH
T ss_pred EE-cCC-CHHHHHhhCCEEEeC------CcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHH
Confidence 88 865 457889999999985 34568999999999999998753 77777777789988765 799999
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 003758 251 RAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 251 eaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL 293 (797)
++|.++++|++. ++++++.+++........+++....+++
T Consensus 339 ~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 339 DSCQELQAKDTY---ARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHH---HHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 999999999876 6777777777766655555555444443
No 42
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.81 E-value=1.7e-08 Score=109.51 Aligned_cols=157 Identities=17% Similarity=0.154 Sum_probs=109.2
Q ss_pred CCCEEEEEEcccccc-ccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEE
Q 003758 100 KDEIVVVVVGSSFFY-NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRH 178 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~-KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~f 178 (797)
..+.+++++|+.... ++. +....+++++. + .++++ ++++.+... +.+. .+++ +|++
T Consensus 231 ~~~~v~v~~G~~~~~~~~~-~~~~~~~~~l~----------~--~~~~~-v~~~g~~~~--~~l~------~~~~-~v~~ 287 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGI-GAVEPIIAAAG----------E--VDADF-VLALGDLDI--SPLG------TLPR-NVRA 287 (398)
T ss_dssp SSCEEEECCTTTHHHHHCG-GGHHHHHHHHH----------T--SSSEE-EEECTTSCC--GGGC------SCCT-TEEE
T ss_pred CCCEEEEEcCCCccccCcH-HHHHHHHHHHH----------c--CCCEE-EEEECCcCh--hhhc------cCCC-cEEE
Confidence 345677778887543 122 22333333332 1 25775 555555433 2221 3455 7999
Q ss_pred ecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEE----cCCCChh--HhhhcCCeEEEEcCC--CHHHHH
Q 003758 179 YGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT----PDFPIIK--EYVAEGAQVIFFQKD--NPEGLS 250 (797)
Q Consensus 179 lG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIa----sd~gGi~--EiI~Dg~nG~Lfd~~--D~eeLA 250 (797)
.|.. ++..+|..||++|.. |.+.+++|||++|+|+|+ .+-.+.. +.+.+...|++++.+ +.+.|+
T Consensus 288 ~~~~-~~~~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 288 VGWT-PLHTLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR 360 (398)
T ss_dssp ESSC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH
T ss_pred EccC-CHHHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH
Confidence 9987 889999999999973 556789999999999999 4556788 899888899999765 566665
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 003758 251 RAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 251 eaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL 293 (797)
++++|++. ++++++.+++......+.++++.+.+++
T Consensus 361 ----~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 361 ----RLIGDESL---RTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp ----HHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ----HHHcCHHH---HHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 88889887 7888888888887777766666655543
No 43
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.80 E-value=1.9e-08 Score=109.23 Aligned_cols=131 Identities=16% Similarity=0.126 Sum_probs=96.0
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+++++++|.+.+. +.+. .+.+ +|++.|..... .+|..||++|..+ ...+++|||++|+|+|+..
T Consensus 277 ~~~v~~~g~~~~~--~~l~------~~~~-~v~~~~~~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p 340 (415)
T 3rsc_A 277 WHVVMTLGGQVDP--AALG------DLPP-NVEAHRWVPHV-KVLEQATVCVTHG------GMGTLMEALYWGRPLVVVP 340 (415)
T ss_dssp CEEEEECTTTSCG--GGGC------CCCT-TEEEESCCCHH-HHHHHEEEEEESC------CHHHHHHHHHTTCCEEECC
T ss_pred cEEEEEeCCCCCh--HHhc------CCCC-cEEEEecCCHH-HHHhhCCEEEECC------cHHHHHHHHHhCCCEEEeC
Confidence 7766667866443 2221 3444 79999976666 9999999999843 3468899999999999954
Q ss_pred CC----ChhHhhhcCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 003758 225 FP----IIKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 294 (797)
Q Consensus 225 ~g----Gi~EiI~Dg~nG~Lfd~~--D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe 294 (797)
.. .+.+.+.+...|..++.+ ++++|+++|.++++|++. ++++.+.+++.....-....++.+.+++.
T Consensus 341 ~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 341 QSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPAL---LARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp CSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 43 467777777789888765 899999999999999876 67777777776665544455555555543
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.71 E-value=4.8e-08 Score=107.83 Aligned_cols=161 Identities=13% Similarity=0.076 Sum_probs=106.7
Q ss_pred CCEEEEEEcccccc-ccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEe
Q 003758 101 DEIVVVVVGSSFFY-NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179 (797)
Q Consensus 101 d~~vIL~VGrl~~~-KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~fl 179 (797)
...+++++|+.... +...+....+++++.. .++++++.+| +... +.+. .+++ +|++.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g-~~~~--~~l~------~~~~-~v~~~ 324 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFD-AQQL--EGVA------NIPD-NVRTV 324 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCC-TTTT--SSCS------SCCS-SEEEC
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEEC-Ccch--hhhc------cCCC-CEEEe
Confidence 45678888886543 0122444666666632 2467544444 3322 1111 3444 79999
Q ss_pred cChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcCCeEEEEcCC--CHHHHHHHH
Q 003758 180 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD--NPEGLSRAF 253 (797)
Q Consensus 180 G~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~--D~eeLAeaI 253 (797)
|.... ..+|..||++|.. |.+.+++|||++|+|+|+.+.. .+.+.+.+...|++++.. ++++|+++|
T Consensus 325 ~~~~~-~~ll~~ad~~V~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 397 (441)
T 2yjn_A 325 GFVPM-HALLPTCAATVHH------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESV 397 (441)
T ss_dssp CSCCH-HHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHH
T ss_pred cCCCH-HHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHH
Confidence 97655 6789999999983 4568999999999999999885 366777777789988765 799999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 003758 254 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 293 (797)
Q Consensus 254 ~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL 293 (797)
.++++|++. ++++++.+++........++++...+++
T Consensus 398 ~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 398 KRVLDDPAH---RAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp HHHHHCHHH---HHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHhcCHHH---HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999876 6777777777666555555555544443
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.59 E-value=4.2e-07 Score=99.32 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=86.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT 222 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIa 222 (797)
.++++++++|.+... +.+. .+++ +|++.+...+. .+|+.||++|.. +..++++|||++|+|+|+
T Consensus 283 ~~~~~~~~~g~~~~~--~~~~------~~~~-~v~~~~~~~~~-~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 283 LDWHVVLSVGRFVDP--ADLG------EVPP-NVEVHQWVPQL-DILTKASAFITH------AGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp CSSEEEEECCTTSCG--GGGC------SCCT-TEEEESSCCHH-HHHTTCSEEEEC------CCHHHHHHHHHTTCCEEE
T ss_pred CCcEEEEEECCcCCh--HHhc------cCCC-CeEEecCCCHH-HHHhhCCEEEEC------CchhHHHHHHHcCCCEEE
Confidence 457766778876543 2221 2444 79999976565 799999999873 445899999999999999
Q ss_pred cCCC----ChhHhhhcCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 003758 223 PDFP----IIKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK 278 (797)
Q Consensus 223 sd~g----Gi~EiI~Dg~nG~Lfd~~--D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak 278 (797)
.... ...+.+.+...|+.++.+ ++++|+++|.++++|++. ++++.+.+++...
T Consensus 347 ~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~~~~~~ 405 (424)
T 2iya_A 347 VPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGV---AERLAAVRQEIRE 405 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHT
T ss_pred ecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHh
Confidence 8875 355666667778888654 899999999999999876 5556555555443
No 46
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.32 E-value=1.6e-06 Score=94.84 Aligned_cols=156 Identities=13% Similarity=-0.055 Sum_probs=101.8
Q ss_pred CEEEEEEcccc-ccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec
Q 003758 102 EIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180 (797)
Q Consensus 102 ~~vIL~VGrl~-~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG 180 (797)
..++++.|+.. .. +....+++++..+ +.++++++|.+... ...+++ +|.+.+
T Consensus 239 ~~v~v~~Gs~~~~~----~~~~~~~~al~~~------------~~~~v~~~g~~~~~----------~~~~~~-~v~~~~ 291 (415)
T 1iir_A 239 PPVYLGFGSLGAPA----DAVRVAIDAIRAH------------GRRVILSRGWADLV----------LPDDGA-DCFAIG 291 (415)
T ss_dssp CCEEEECC---CCH----HHHHHHHHHHHHT------------TCCEEECTTCTTCC----------CSSCGG-GEEECS
T ss_pred CeEEEeCCCCCCcH----HHHHHHHHHHHHC------------CCeEEEEeCCCccc----------ccCCCC-CEEEeC
Confidence 56778888864 22 3335555665433 24555555765431 023444 799999
Q ss_pred ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhhcCCeEEEEcCC--CHHHHHHHHH
Q 003758 181 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAFS 254 (797)
Q Consensus 181 ~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~Dg~nG~Lfd~~--D~eeLAeaI~ 254 (797)
.... .++|..||++|.. +...+++|||++|+|+|+....+ ..+.+.+...|+.++.. +.++|+++|.
T Consensus 292 ~~~~-~~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~ 364 (415)
T 1iir_A 292 EVNH-QVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALA 364 (415)
T ss_dssp SCCH-HHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHH
T ss_pred cCCh-HHHHhhCCEEEeC------CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHH
Confidence 6544 4678999999984 33579999999999999987754 66667776779888653 7999999999
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Q 003758 255 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 299 (797)
Q Consensus 255 ~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~ 299 (797)
++ +|++. ++++.+.+++ .......+...++++.+++.
T Consensus 365 ~l-~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 365 TA-LTPET---HARATAVAGT----IRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HH-TSHHH---HHHHHHHHHH----SCSCHHHHHHHHHHHHHHTC
T ss_pred HH-cCHHH---HHHHHHHHHH----HhhcChHHHHHHHHHHHHhc
Confidence 99 88765 4444444333 33334455666677777654
No 47
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.18 E-value=1.2e-05 Score=95.62 Aligned_cols=191 Identities=10% Similarity=0.026 Sum_probs=126.5
Q ss_pred HHHHcCC--CCCCEEEEEEccccccccccccHHH-HHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHH------H
Q 003758 92 LRKENGF--LKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA------L 162 (797)
Q Consensus 92 lR~klGL--~~d~~vIL~VGrl~~~KGl~Kn~~l-LLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~------L 162 (797)
+++.+|+ .++.+.++++.|+..+|+. .+ +++.+..+..-...-.....+++ ++++|++...|... +
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq----~Lnil~ii~~~~~i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIk~i 588 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQ----HLNLLHILALYKEIRENPQADRVPRV-FLFGAKAAPGYYLAKNIIFAI 588 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTH----HHHHHHHHHHHHHHHTCTTCCCCCEE-EEEECCCCTTCHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhccc----CEeHHHHHHHHHHHhcCCCCCCCCeE-EEEEecCChhHHHHHHHHHHH
Confidence 4666775 5678899999999999654 77 78877766421110000114678 48999998888665 4
Q ss_pred HHHHHH----cCCCCC--eEEEec--ChhhHHHHHHHcCEEEEccC--CCCCCccHHHHHHHHhCCcEEEcCCCChhHhh
Q 003758 163 QEVASR----LGLLEH--SVRHYG--FNGDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 232 (797)
Q Consensus 163 eela~e----lgL~d~--~V~flG--~~edl~~~L~aADV~V~PS~--~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI 232 (797)
...+.. ..+ .+ +|.|+. ..+-...++++||+.+.||. .| ++|+.-+-||..|.+.|++--|...|+.
T Consensus 589 ~~va~~in~Dp~~-~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~ 665 (796)
T 1l5w_A 589 NKVADVINNDPLV-GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKE--ASGTGNMKLALNGALTVGTLDGANVEIA 665 (796)
T ss_dssp HHHHHHHHTCTTT-GGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTC--CCCSHHHHHHHTTCEEEECSCTTHHHHH
T ss_pred HHHHHHhcccccc-CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeeecCcCCeeeehh
Confidence 444441 112 22 477776 34557789999999999999 88 8889999999999999999889888877
Q ss_pred hc--CCeEEEEcCCCHHHHHHHHHHH------H-hCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 233 AE--GAQVIFFQKDNPEGLSRAFSLF------I-SNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 233 ~D--g~nG~Lfd~~D~eeLAeaI~~L------L-edpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
+. ..|||+|.. +++++.+.-... + .++. +.+.-.......|++.....|..+|.+++.
T Consensus 666 e~vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~~-------~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 666 EKVGEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDKV-------LDAVLKELESGKYSDGDKHAFDQMLHSIGK 732 (796)
T ss_dssp HHHCGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCHH-------HHHHHHHHHHTTTTTTCTTTTHHHHHHTST
T ss_pred hccCCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCHH-------HHHHHHHHHcCCCCCCcHHHHHHHHHHHhc
Confidence 54 368999975 777766432221 1 1222 122222233345554334678888888764
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.11 E-value=7.1e-06 Score=89.63 Aligned_cols=157 Identities=13% Similarity=0.001 Sum_probs=99.2
Q ss_pred CEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecC
Q 003758 102 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 181 (797)
Q Consensus 102 ~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~ 181 (797)
..++++.|+..... ..+....+++++..+ ++++++++|.+... . ..+++ +|.+.+.
T Consensus 238 ~~v~v~~Gs~~~~~-~~~~~~~~~~al~~~------------~~~~v~~~g~~~~~----~------~~~~~-~v~~~~~ 293 (416)
T 1rrv_A 238 PPVHIGFGSSSGRG-IADAAKVAVEAIRAQ------------GRRVILSRGWTELV----L------PDDRD-DCFAIDE 293 (416)
T ss_dssp CCEEECCTTCCSHH-HHHHHHHHHHHHHHT------------TCCEEEECTTTTCC----C------SCCCT-TEEEESS
T ss_pred CeEEEecCCCCccC-hHHHHHHHHHHHHHC------------CCeEEEEeCCcccc----c------cCCCC-CEEEecc
Confidence 45777788764211 112234444444322 34555556765421 0 23455 7999996
Q ss_pred hhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcCCeEEEEcC--CCHHHHHHHHHH
Q 003758 182 NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQK--DNPEGLSRAFSL 255 (797)
Q Consensus 182 ~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~--~D~eeLAeaI~~ 255 (797)
.. ..++|..||++|.. |...+++|||++|+|+|+.... ...+.+.+...|+.++. .+.++|+++|.+
T Consensus 294 ~~-~~~ll~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 366 (416)
T 1rrv_A 294 VN-FQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTT 366 (416)
T ss_dssp CC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHH
T ss_pred CC-hHHHhccCCEEEec------CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHH
Confidence 53 56788999999983 4457999999999999997764 35566766677888764 478999999999
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH-HHHhc
Q 003758 256 FISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL-ENVLN 298 (797)
Q Consensus 256 LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLL-e~lL~ 298 (797)
+ .|++. ++++.+.+++... .... ...+.+ +.+++
T Consensus 367 l-~~~~~---~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 367 V-LAPET---RARAEAVAGMVLT----DGAA-AAADLVLAAVGR 401 (416)
T ss_dssp H-TSHHH---HHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC
T ss_pred h-hCHHH---HHHHHHHHHHHhh----cCcH-HHHHHHHHHHhc
Confidence 9 88865 5555544443332 2223 444445 55554
No 49
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.05 E-value=4.9e-05 Score=90.46 Aligned_cols=192 Identities=12% Similarity=0.076 Sum_probs=126.0
Q ss_pred HHHHcCC--CCCCEEEEEEccccccccccccHHH-HHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHH------H
Q 003758 92 LRKENGF--LKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA------L 162 (797)
Q Consensus 92 lR~klGL--~~d~~vIL~VGrl~~~KGl~Kn~~l-LLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~------L 162 (797)
+++++|+ .++.+.++++.|+..+|+. .+ +++.+..+..-...-.....+++ ++++|.+...|... +
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq----~Lnil~ii~~~~~i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIk~i 578 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQ----LMNALYVLDLYFRIKEDGLTDIPART-VIFGAKAAPGYVRAKAIIKLI 578 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTH----HHHHHHHHHHHHHHHTSCCCSSCCEE-EEEECCCCTTCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhccc----CEeHHHHHHHHHHHhhCCCCCCCCeE-EEEEecCCHhHHHHHHHHHHH
Confidence 4667775 5678899999999999654 77 78877766421100000114678 48999998888665 4
Q ss_pred HHHHH----HcCCCCC--eEEEec--ChhhHHHHHHHcCEEEEccC--CCCCCccHHHHHHHHhCCcEEEcCCCChhHhh
Q 003758 163 QEVAS----RLGLLEH--SVRHYG--FNGDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 232 (797)
Q Consensus 163 eela~----elgL~d~--~V~flG--~~edl~~~L~aADV~V~PS~--~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI 232 (797)
...+. ...++ + +|.|+. ..+-...++++||+.+.||. .| ++|+.-+-||..|.+.|++--|...|+.
T Consensus 579 ~~va~~in~dp~~~-~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~ 655 (796)
T 2c4m_A 579 NSIADLVNNDPEVS-PLLKVVFVENYNVSPAEHILPASDVSEQISTAGKE--ASGTSNMKFMMNGALTLGTMDGANVEIV 655 (796)
T ss_dssp HHHHHHHHTCTTTT-TTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCHHHHHHHHTTCEEEEESSTHHHHHH
T ss_pred HHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeEEeccCCeEeehh
Confidence 44444 01122 2 577776 44557789999999999999 87 9999999999999999999888888876
Q ss_pred hc--CCeEEEEcC--CCHHHHHHH---HHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 233 AE--GAQVIFFQK--DNPEGLSRA---FSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 233 ~D--g~nG~Lfd~--~D~eeLAea---I~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
+. ..|||+|.. .++.++... ..-.-.++.+ +++ -.......|++.....|..+|..++.
T Consensus 656 e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~~----~~v---vd~~~~g~fs~~~~~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 656 DSVGEENAYIFGARVEELPALRESYKPYELYETVPGL----KRA---LDALDNGTLNDNNSGLFYDLKHSLIH 721 (796)
T ss_dssp HHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTTH----HHH---HHTTTSSSSCCTTCCHHHHHHHHHHS
T ss_pred hhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHHH----HHH---HHHHHcCCCCCCCHHHHHHHHHHHHh
Confidence 54 368999976 666666543 1111223332 111 11122234443333678999988874
No 50
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.99 E-value=7.6e-05 Score=89.18 Aligned_cols=192 Identities=13% Similarity=0.057 Sum_probs=124.4
Q ss_pred HHHHcCC--CCCCEEEEEEccccccccccccHHHH-HHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHH------H
Q 003758 92 LRKENGF--LKDEIVVVVVGSSFFYNELSWDYAVA-MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA------L 162 (797)
Q Consensus 92 lR~klGL--~~d~~vIL~VGrl~~~KGl~Kn~~lL-LkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~------L 162 (797)
+++.+|+ .++.+.++++.|+..+|+. .++ +..+..+..-...-...-.+++ ++++|++...|... +
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq----~L~~l~~i~~~~~i~~~~~~~~~p~q-~If~GKA~P~y~~aK~iIkli 612 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQ----LLNCLHVITLYNRIKKEPNKFVVPRT-VMIGGKAAPGYHMAKMIIKLI 612 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTH----HHHHHHHHHHHHHHHHCTTSCCCCEE-EEEECCCCTTCHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcch----hhHHHHHHHHHHHHHhCCCCCCCCEE-EEEEEeCCHhHHHHHHHHHHH
Confidence 5566775 5678899999999999654 665 7777766421110000012568 49999998888666 5
Q ss_pred HHHHHHcCCC---CC--eEEEec--ChhhHHHHHHHcCEEEEccC--CCCCCccHHHHHHHHhCCcEEEcCCCChhHhhh
Q 003758 163 QEVASRLGLL---EH--SVRHYG--FNGDVNGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 233 (797)
Q Consensus 163 eela~elgL~---d~--~V~flG--~~edl~~~L~aADV~V~PS~--~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~ 233 (797)
...++..+-. .+ +|.|+. ..+-...++++||+.+.||. .| ++|++-+-||..|.+.|++--|...|+.+
T Consensus 613 ~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~E--AsGTs~MKamlNGaLtigtlDGanvEi~e 690 (824)
T 2gj4_A 613 TAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTE--ASGTGNMKFMLNGALTIGTMDGANVEMAE 690 (824)
T ss_dssp HHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCSHHHHHHHTTCEEEECSCTTHHHHHH
T ss_pred HHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCceEEEEecCccchhhh
Confidence 5555543110 12 477776 34557779999999999999 88 88888999999999999988887778764
Q ss_pred --cCCeEEEEcCCCHHHHHHHHH-------HHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 234 --EGAQVIFFQKDNPEGLSRAFS-------LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 234 --Dg~nG~Lfd~~D~eeLAeaI~-------~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
...|||+|... .+++ .++. .+++... .+.+.........|++..-..|..+|.+++.
T Consensus 691 ~vG~~Ngf~FG~~-~~ev-~~l~~~~~~a~~~Y~~~~------~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~ 756 (824)
T 2gj4_A 691 EAGEENFFIFGMR-VEDV-DRLDQRGYNAQEYYDRIP------ELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH 756 (824)
T ss_dssp HHCGGGSEECSCC-HHHH-HHHHHHCCCHHHHHHHCH------HHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH
T ss_pred ccCCCCEEEeCCc-HHHH-HHHHHcCCCHHHHhcCCH------HHHHHHHHHHhCCCCCCChHHHHHHHHHHHc
Confidence 45689999754 6666 4432 1222111 1111222233445554333678888888875
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.98 E-value=3e-05 Score=83.20 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=62.3
Q ss_pred CCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcCCeEEEEcCCC
Q 003758 170 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKDN 245 (797)
Q Consensus 170 gL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~D 245 (797)
.+++ +|.+.+.. ....+|..+|++|.- +..++++|||++|+|+|+.... .+.+.+.+...|+.++..+
T Consensus 285 ~~~~-~v~~~~~~-p~~~lL~~~~~~v~h------~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~ 356 (400)
T 4amg_A 285 ELPA-NVRVVEWI-PLGALLETCDAIIHH------GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGS 356 (400)
T ss_dssp CCCT-TEEEECCC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTT
T ss_pred cCCC-CEEEEeec-CHHHHhhhhhheecc------CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCC
Confidence 3455 78888854 356789999998873 5567899999999999986655 3566666666687776444
Q ss_pred HHHHHHHHHHHHhCccc
Q 003758 246 PEGLSRAFSLFISNGKL 262 (797)
Q Consensus 246 ~eeLAeaI~~LLedpel 262 (797)
.++++|.++++|+..
T Consensus 357 --~~~~al~~lL~d~~~ 371 (400)
T 4amg_A 357 --LGAEQCRRLLDDAGL 371 (400)
T ss_dssp --CSHHHHHHHHHCHHH
T ss_pred --chHHHHHHHHcCHHH
Confidence 467899999999986
No 52
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.96 E-value=2.4e-05 Score=85.55 Aligned_cols=157 Identities=17% Similarity=0.070 Sum_probs=98.2
Q ss_pred CCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEe
Q 003758 100 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 179 (797)
Q Consensus 100 ~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~fl 179 (797)
..+++++.+|+.... .+....+++++..+ ++++++.+|..... ..+..+ +|.+.
T Consensus 220 ~~~~Vlv~~Gs~~~~---~~~~~~~~~al~~~------------~~~vv~~~g~~~~~----------~~~~~~-~v~~~ 273 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAP---AEAARVAIEAVRAQ------------GRRVVLSSGWAGLG----------RIDEGD-DCLVV 273 (404)
T ss_dssp SSCCEEECCTTSCCC---TTHHHHHHHHHHHT------------TCCEEEECTTTTCC----------CSSCCT-TEEEE
T ss_pred CCCeEEEECCCCCCc---HHHHHHHHHHHHhC------------CCEEEEEeCCcccc----------cccCCC-CEEEe
Confidence 345677778886531 13345555555432 35654444533221 123344 79999
Q ss_pred cChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhhcCCeEEEEcCC--CHHHHHHHH
Q 003758 180 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAF 253 (797)
Q Consensus 180 G~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~Dg~nG~Lfd~~--D~eeLAeaI 253 (797)
+... ...+|..||++|.. |...++.|||++|+|+|+....+ ..+.+.+...|..++.. +.++|+++|
T Consensus 274 ~~~~-~~~ll~~~d~~v~~------gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 346 (404)
T 3h4t_A 274 GEVN-HQVLFGRVAAVVHH------GGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAAL 346 (404)
T ss_dssp SSCC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHH
T ss_pred cCCC-HHHHHhhCcEEEEC------CcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHH
Confidence 9654 47889999999984 33478899999999999976653 34456565678887643 799999999
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758 254 SLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 298 (797)
Q Consensus 254 ~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~ 298 (797)
.++++ ++. ++++.+.+..... +-++...++++.++.
T Consensus 347 ~~ll~-~~~---~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 347 ATALT-PGI---RARAAAVAGTIRT-----DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHTS-HHH---HHHHHHHHTTCCC-----CHHHHHHHHHHHHHH
T ss_pred HHHhC-HHH---HHHHHHHHHHHhh-----hHHHHHHHHHHHHHh
Confidence 99998 665 4444444443333 233444444444444
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.95 E-value=0.00011 Score=87.52 Aligned_cols=182 Identities=12% Similarity=0.063 Sum_probs=123.8
Q ss_pred HHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCC
Q 003758 92 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL 171 (797)
Q Consensus 92 lR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL 171 (797)
.|..+|++.+.++++.+.++. |=....++.+.+++... |+-++ ++...... -...+++.+++.|+
T Consensus 513 ~R~~~gLp~~~v~f~~fN~~~------Ki~p~~~~~W~~IL~~v-------P~S~L-~Ll~~~~~-~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNFNQLY------KIDPSTLQMWANILKRV-------PNSVL-WLLRFPAV-GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTCCTTSEEEECCSCGG------GCCHHHHHHHHHHHHHC-------SSEEE-EEEETTGG-GHHHHHHHHHHTTC
T ss_pred chhhcCCCCCCEEEEeCCccc------cCCHHHHHHHHHHHHhC-------CCCeE-EEEeCcHH-HHHHHHHHHHhcCC
Confidence 377889999988777765543 33478888888887544 66774 45444332 24788888899999
Q ss_pred CCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhH-----hhhc-CCeEEEEcC
Q 003758 172 LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE-----YVAE-GAQVIFFQK 243 (797)
Q Consensus 172 ~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~E-----iI~D-g~nG~Lfd~ 243 (797)
...+|.|.+ +.++....+..+||++=|-.+ +.+.+.+||+.+|+|||+-.-..+.. ++.. |-..++ .
T Consensus 578 ~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~---~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a 652 (723)
T 4gyw_A 578 PQNRIIFSPVAPKEEHVRRGQLADVCLDTPLC---NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI--A 652 (723)
T ss_dssp CGGGEEEEECCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--C
T ss_pred CcCeEEECCCCCHHHHHHHhCCCeEEeCCCCc---CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc--c
Confidence 876899998 567788889999999987665 66899999999999999864332111 1111 111222 2
Q ss_pred CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH--hcHHHH-HHHHHHHHHHH
Q 003758 244 DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN--MLALDC-VTRYARILENV 296 (797)
Q Consensus 244 ~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~--~~s~e~-i~~Y~kLLe~l 296 (797)
.|.++.++....+..|++. +..+...-++...+ .|.... +..+.+.|+.+
T Consensus 653 ~~~~~Y~~~a~~la~d~~~---l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~ 705 (723)
T 4gyw_A 653 KNRQEYEDIAVKLGTDLEY---LKKVRGKVWKQRISSPLFNTKQYTMELERLYLQM 705 (723)
T ss_dssp SSHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHH
Confidence 6899999999999999987 56665555554433 333322 45555555554
No 54
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.05 E-value=0.0081 Score=63.64 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=52.7
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCC
Q 003758 147 FVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF 225 (797)
Q Consensus 147 fLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~ 225 (797)
+.+++|.+... .+.+++.+.+ .+ ++.+.++.+++.++|+.||++|.+ | |.++.|++++|+|+|.-..
T Consensus 186 i~vv~G~~~~~-~~~l~~~~~~--~~--~v~v~~~~~~m~~~m~~aDlvI~~------g-G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPN-LKKLQKFAKL--HN--NIRLFIDHENIAKLMNESNKLIIS------A-SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTT-HHHHHHHHHT--CS--SEEEEESCSCHHHHHHTEEEEEEE------S-SHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchH-HHHHHHHHhh--CC--CEEEEeCHHHHHHHHHHCCEEEEC------C-cHHHHHHHHcCCCEEEEeC
Confidence 45788887653 4666665553 22 699999999999999999999993 2 4799999999999887654
No 55
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=96.97 E-value=0.0041 Score=69.67 Aligned_cols=80 Identities=15% Similarity=0.110 Sum_probs=60.8
Q ss_pred eEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcC-CeEEEEcCC--C
Q 003758 175 SVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEG-AQVIFFQKD--N 245 (797)
Q Consensus 175 ~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg-~nG~Lfd~~--D 245 (797)
++.+++.... ..+|+ ++|++|.- +..++++||+++|+|+|+-... .....+.+. +.|..++.+ +
T Consensus 326 ~~~v~~w~pq-~~vL~h~~~~~fvth------~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~ 398 (456)
T 2c1x_A 326 YGMVVPWAPQ-AEVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 398 (456)
T ss_dssp TEEEESCCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred ceEEecCCCH-HHHhcCCcCCEEEec------CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcC
Confidence 6888885444 36788 67788772 5568899999999999987765 345566665 678877643 6
Q ss_pred HHHHHHHHHHHHhCcc
Q 003758 246 PEGLSRAFSLFISNGK 261 (797)
Q Consensus 246 ~eeLAeaI~~LLedpe 261 (797)
.+++.++|.+++++++
T Consensus 399 ~~~l~~~i~~ll~~~~ 414 (456)
T 2c1x_A 399 KSGLMSCFDQILSQEK 414 (456)
T ss_dssp HHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHCCCc
Confidence 8999999999999874
No 56
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=96.93 E-value=0.013 Score=66.00 Aligned_cols=198 Identities=11% Similarity=0.123 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHhccCEEEecCCc-hHH-----HhhCCCCCCEEEeCCCCCCchhhhhcccchhHHHHHHHcCC-CCCCEE
Q 003758 32 QNLLSYWKSVFSRVNVIVFPDYT-LPM-----LYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGF-LKDEIV 104 (797)
Q Consensus 32 eklls~~~~~~~~AD~VV~ps~~-l~~-----i~~gld~~ki~VIPnsGVDvw~ae~F~~s~~k~slR~klGL-~~d~~v 104 (797)
..++......+..++.|++.+.. +.. +.... .++..|- |+-....... ..+...+.+-++- ++...+
T Consensus 203 ~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~--~~v~~vG--Pl~~~~~~~~--~~~~~~~~~wLd~~~~~~vV 276 (454)
T 3hbf_A 203 ATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF--KLLLNVG--PFNLTTPQRK--VSDEHGCLEWLDQHENSSVV 276 (454)
T ss_dssp HHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS--SCEEECC--CHHHHSCCSC--CCCTTCHHHHHHTSCTTCEE
T ss_pred HHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC--CCEEEEC--Cccccccccc--ccchHHHHHHHhcCCCCceE
Confidence 33444455567889998887643 211 12222 3565553 2321000000 0001122222332 345667
Q ss_pred EEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHH-HHHHHcCCCCCeEEEecChh
Q 003758 105 VVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQ-EVASRLGLLEHSVRHYGFNG 183 (797)
Q Consensus 105 IL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Le-ela~elgL~d~~V~flG~~e 183 (797)
++..|+..... . .....+++++.. .+.+||..+|.... +.+- ..... .++ ++.+++...
T Consensus 277 yvsfGS~~~~~-~-~~~~el~~~l~~------------~~~~flw~~~~~~~---~~lp~~~~~~--~~~-~~~vv~w~P 336 (454)
T 3hbf_A 277 YISFGSVVTPP-P-HELTALAESLEE------------CGFPFIWSFRGDPK---EKLPKGFLER--TKT-KGKIVAWAP 336 (454)
T ss_dssp EEECCSSCCCC-H-HHHHHHHHHHHH------------HCCCEEEECCSCHH---HHSCTTHHHH--TTT-TEEEESSCC
T ss_pred EEecCCCCcCC-H-HHHHHHHHHHHh------------CCCeEEEEeCCcch---hcCCHhHHhh--cCC-ceEEEeeCC
Confidence 77888865431 1 112222222221 23566666665321 1110 11111 223 688888554
Q ss_pred hHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhhhcC-CeEEEEcC--CCHHHHHHHHHHH
Q 003758 184 DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEG-AQVIFFQK--DNPEGLSRAFSLF 256 (797)
Q Consensus 184 dl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI~Dg-~nG~Lfd~--~D~eeLAeaI~~L 256 (797)
. ..+|+.+++.++-++ +.-++++||+++|+|+|+-... .....+.+. +.|+.++. -+.+++.++|.++
T Consensus 337 q-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~l 411 (454)
T 3hbf_A 337 Q-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELT 411 (454)
T ss_dssp H-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHH
T ss_pred H-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHH
Confidence 4 588999996555443 4467899999999999987654 355566664 67888764 4689999999999
Q ss_pred HhCc
Q 003758 257 ISNG 260 (797)
Q Consensus 257 Ledp 260 (797)
++++
T Consensus 412 l~~~ 415 (454)
T 3hbf_A 412 MSSE 415 (454)
T ss_dssp HSSH
T ss_pred HCCC
Confidence 9875
No 57
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=96.89 E-value=0.027 Score=63.23 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=65.1
Q ss_pred eEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC----hhHhhh-cCCeEEEEc-CCCHHH
Q 003758 175 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVA-EGAQVIFFQ-KDNPEG 248 (797)
Q Consensus 175 ~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG----i~EiI~-Dg~nG~Lfd-~~D~ee 248 (797)
++.+++..... .+|+.+++-++-++ |..++++||+++|+|+|+-...+ ....+. +.+.|+.++ .-+.++
T Consensus 354 ~~~v~~~~pq~-~~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~ 428 (482)
T 2pq6_A 354 RGLIASWCPQD-KVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREE 428 (482)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHH
T ss_pred CEEEEeecCHH-HHhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHH
Confidence 68888855444 58877666333222 55688999999999999987652 444453 555687775 237899
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 003758 249 LSRAFSLFISNGKLSKFARTVASAGRLHAKN 279 (797)
Q Consensus 249 LAeaI~~LLedpel~~~r~~m~~~aRk~ak~ 279 (797)
+.++|.+++++++ .+.+.+++++..+.
T Consensus 429 l~~~i~~ll~~~~----~~~~r~~a~~l~~~ 455 (482)
T 2pq6_A 429 LAKLINEVIAGDK----GKKMKQKAMELKKK 455 (482)
T ss_dssp HHHHHHHHHTSHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc----HHHHHHHHHHHHHH
Confidence 9999999999885 23344444444433
No 58
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=96.78 E-value=0.025 Score=63.36 Aligned_cols=121 Identities=14% Similarity=0.109 Sum_probs=74.9
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcEE
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVI 221 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVI 221 (797)
+.+||+++|.+.....+.+.+.... ++ ++.+++..... .+|. ++|++|.- +..++++||+++|+|+|
T Consensus 306 ~~~~l~~~~~~~~~l~~~~~~~~~~---~~-~~~v~~w~pq~-~vL~h~~~~~fvth------~G~~s~~Eal~~GvP~i 374 (463)
T 2acv_A 306 GVRFLWSNSAEKKVFPEGFLEWMEL---EG-KGMICGWAPQV-EVLAHKAIGGFVSH------CGWNSILESMWFGVPIL 374 (463)
T ss_dssp TCEEEEECCCCGGGSCTTHHHHHHH---HC-SEEEESSCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHTTCCEE
T ss_pred CCcEEEEECCCcccCChhHHHhhcc---CC-CEEEEccCCHH-HHhCCCccCeEEec------CCchhHHHHHHcCCCee
Confidence 3677777876411011222222210 12 57778855444 5776 67777772 55689999999999999
Q ss_pred EcCCC----ChhHh-hhcCCeEEEE-c-------CCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHH
Q 003758 222 TPDFP----IIKEY-VAEGAQVIFF-Q-------KDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRL 275 (797)
Q Consensus 222 asd~g----Gi~Ei-I~Dg~nG~Lf-d-------~~D~eeLAeaI~~LLe-dpel~~~r~~m~~~aRk 275 (797)
+-... ..... +...+.|+.+ + .-+.+++.++|.++++ +++.++.++++++.+++
T Consensus 375 ~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 375 TWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 442 (463)
T ss_dssp ECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHH
T ss_pred eccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 87765 34555 4666678877 2 2378999999999997 35553334444444433
No 59
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.53 E-value=0.032 Score=62.82 Aligned_cols=80 Identities=10% Similarity=-0.017 Sum_probs=56.8
Q ss_pred EEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCC----ChhHhh-hcCCeEEEEcC-----CC
Q 003758 176 VRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYV-AEGAQVIFFQK-----DN 245 (797)
Q Consensus 176 V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~g----Gi~EiI-~Dg~nG~Lfd~-----~D 245 (797)
+.+.+..... .+|+.+++.++-++ |.-++++||+++|+|+|+-... .....+ ...+.|+.++. -+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 3444444333 89999996444343 4567899999999999987765 345554 56667877754 36
Q ss_pred HHHHHHHHHHHHhCc
Q 003758 246 PEGLSRAFSLFISNG 260 (797)
Q Consensus 246 ~eeLAeaI~~LLedp 260 (797)
.++++++|.+++.++
T Consensus 416 ~~~l~~av~~vl~~~ 430 (480)
T 2vch_A 416 REEVARVVKGLMEGE 430 (480)
T ss_dssp HHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHhcCc
Confidence 899999999999843
No 60
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=95.96 E-value=0.0098 Score=61.14 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=52.0
Q ss_pred eEEEecChhhHHHHHH-HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCC--------hhHhhhcCCeEEEEcCCC
Q 003758 175 SVRHYGFNGDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN 245 (797)
Q Consensus 175 ~V~flG~~edl~~~L~-aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gG--------i~EiI~Dg~nG~Lfd~~D 245 (797)
++...++..++..+|+ .||++|.- +...+++|++++|+|.|.-..+. ..+.+.+...++++ +
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsh------aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~ 185 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISH------AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---A 185 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEES------SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---C
T ss_pred eEEEeeccchHHHHHHhcCCEEEEC------CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---C
Confidence 5667778889999999 99999983 55689999999999988755542 13334333335555 4
Q ss_pred HHHHHHHHHHH
Q 003758 246 PEGLSRAFSLF 256 (797)
Q Consensus 246 ~eeLAeaI~~L 256 (797)
++.|.++|..+
T Consensus 186 ~~~L~~~i~~l 196 (224)
T 2jzc_A 186 PTETGLIAGLR 196 (224)
T ss_dssp SCTTTHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55566676666
No 61
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.94 E-value=0.079 Score=62.57 Aligned_cols=220 Identities=13% Similarity=0.115 Sum_probs=122.4
Q ss_pred CCEEEEEccchhhhhhhhh-----hhhhHHHHHHHHHHHHhccCEEEecCCchHHH---hhCCCCCCEEEeCCCC-CCch
Q 003758 8 IPLVWIIQEDSLANRLPVY-----VERGFQNLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSP-ADVW 78 (797)
Q Consensus 8 IPVIW~IHE~sL~~rL~~y-----~~~g~eklls~~~~~~~~AD~VV~ps~~l~~i---~~gld~~ki~VIPnsG-VDvw 78 (797)
..+|.+-|..+++...... +..........+.......|++++++.....+ ..+++.+++.++.. | .|.
T Consensus 437 ~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~-PR~D~- 514 (729)
T 3l7i_A 437 QTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGY-PRNDV- 514 (729)
T ss_dssp CEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCC-GGGHH-
T ss_pred cEEEECCCCCchhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCC-CchHH-
Confidence 4567777776554422110 11112333344555677889999998665444 23565566766532 2 221
Q ss_pred hhhhccc---chhHHHHHHHcCCCCCCEEEEEEccccccccccc-----cHHHHHHHHHHHHHHHhhhccCCCCcEEEEE
Q 003758 79 AVEAYSK---SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW-----DYAVAMHDVGPLLIKYARRNSVEGSFKFVFL 150 (797)
Q Consensus 79 ~ae~F~~---s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~K-----n~~lLLkAl~~Ll~e~~~lk~~~pdvkfLII 150 (797)
.|.. ......++++++++.++++|++.-+........+ +....++.+...+ +.++. ++
T Consensus 515 ---l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l---------~~~~~--li 580 (729)
T 3l7i_A 515 ---LVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKEL---------GDDYV--IL 580 (729)
T ss_dssp ---HHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHH---------TTTEE--EE
T ss_pred ---HhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHc---------CCCeE--EE
Confidence 1211 1235678899999999999999965332210000 0111222232221 24555 33
Q ss_pred EeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhH
Q 003758 151 CGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE 230 (797)
Q Consensus 151 vG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~E 230 (797)
+-..+ .+.......+..+ .+..+....++.++|..||++|. -++.++.|++..++|||..... ..+
T Consensus 581 ~r~Hp-----~~~~~~~~~~~~~-~~~~~~~~~di~~ll~~aD~lIT-------DySSv~fD~~~l~kPiif~~~D-~~~ 646 (729)
T 3l7i_A 581 LRMHY-----LISNALDLSGYEN-FAIDVSNYNDVSELFLISDCLIT-------DYSSVMFDYGILKRPQFFFAYD-IDK 646 (729)
T ss_dssp ECCCH-----HHHTTCCCTTCTT-TEEECTTCSCHHHHHHTCSEEEE-------SSCTHHHHHGGGCCCEEEECTT-TTT
T ss_pred EecCc-----chhccccccccCC-cEEeCCCCcCHHHHHHHhCEEEe-------echHHHHhHHhhCCCEEEecCC-HHH
Confidence 33222 2221111123344 56666666799999999999998 6788999999999999976322 111
Q ss_pred hhh----------cCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 231 YVA----------EGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 231 iI~----------Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
+.. +...|-++ .+.++|.++|..+...
T Consensus 647 Y~~~~rg~y~d~~~~~pg~~~--~~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 647 YDKGLRGFYMNYMEDLPGPIY--TEPYGLAKELKNLDKV 683 (729)
T ss_dssp TTSSCCSBSSCTTSSSSSCEE--SSHHHHHHHHTTHHHH
T ss_pred HhhccCCcccChhHhCCCCeE--CCHHHHHHHHhhhhcc
Confidence 111 11224444 5789999999877653
No 62
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=94.45 E-value=0.19 Score=52.97 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=66.2
Q ss_pred HHHHHHHcCCCC-CCEEEEEEcc-ccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHH
Q 003758 89 KYQLRKENGFLK-DEIVVVVVGS-SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 166 (797)
Q Consensus 89 k~slR~klGL~~-d~~vIL~VGr-l~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela 166 (797)
....++.+|+.. .+.+++..|+ ....|. +....+.+++..|.. .++++ +++|...+. +..+++.
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~--wp~~~~~~l~~~L~~---------~~~~v-vl~g~~~e~--~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKR--WPHYHYAELAKQLID---------EGYQV-VLFGSAKDH--EAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGS--CCHHHHHHHHHHHHH---------TTCEE-EECCCGGGH--HHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCC--CCHHHHHHHHHHHHH---------CCCeE-EEEeChhhH--HHHHHHH
Confidence 345667788763 4456666666 223332 334466666655531 15674 556654432 3444444
Q ss_pred HHcCC--CCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEc
Q 003758 167 SRLGL--LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 223 (797)
Q Consensus 167 ~elgL--~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIas 223 (797)
+..+- ....+.+.| +..++..+++.||++|... +.+ +-.|+|+|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~D-----sg~--~HlAaa~g~P~v~l 286 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTND-----SGL--MHVAAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEES-----SHH--HHHHHHTTCCEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecC-----CHH--HHHHHHcCCCEEEE
Confidence 32220 111356667 4678999999999999863 223 34499999999974
No 63
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=94.25 E-value=1.7 Score=52.43 Aligned_cols=145 Identities=15% Similarity=0.113 Sum_probs=97.9
Q ss_pred HHHHc-C--CC-----CCCEEEEEEccccccccccccHHH-HHHHHHHHHHHH--------hh-hccCCCCcEEEEEEeC
Q 003758 92 LRKEN-G--FL-----KDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKY--------AR-RNSVEGSFKFVFLCGN 153 (797)
Q Consensus 92 lR~kl-G--L~-----~d~~vIL~VGrl~~~KGl~Kn~~l-LLkAl~~Ll~e~--------~~-lk~~~pdvkfLIIvG~ 153 (797)
+++.. | ++ ++...++++-|+..||.. .+ ++..+..+..-. +. .+++..+.. +|++|+
T Consensus 582 i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq----~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~-~IFaGK 656 (879)
T 1ygp_A 582 IKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQ----QLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKV-SIFGGK 656 (879)
T ss_dssp HHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEE-EEEECC
T ss_pred HHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHH----HHHHHHHHHHHHHHHhCccccCCCcccccCCCCeE-EEEecc
Confidence 44556 5 55 668899999999999644 44 566665442211 11 000124567 488898
Q ss_pred CCCCC--HHHHHHHHHHcC--------CCCC--eEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCc
Q 003758 154 STDGY--NDALQEVASRLG--------LLEH--SVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP 219 (797)
Q Consensus 154 g~~~Y--~e~Leela~elg--------L~d~--~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~P 219 (797)
....| -..+.+++.... +. + +|.|+. ..+-...++.+|||-...|..-.+..|..-+-+|.-|.+
T Consensus 657 AaP~y~~aK~iIklI~~va~~iN~Dp~v~-~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaL 735 (879)
T 1ygp_A 657 SAPGYYMAKLIIKLINCVADIVNNDESIE-HLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGL 735 (879)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHTTCGGGT-TSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCE
T ss_pred CCCCcHHHHHHHHHHHHHHHHhccChhhC-CceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCe
Confidence 76556 223333333321 11 2 578887 456678899999999987765444899999999999999
Q ss_pred EEEcCCCChhHhhhc--CCeEEEEc
Q 003758 220 VITPDFPIIKEYVAE--GAQVIFFQ 242 (797)
Q Consensus 220 VIasd~gGi~EiI~D--g~nG~Lfd 242 (797)
.|++--|...|+.++ ..|+|+|-
T Consensus 736 tlgtlDGanvEi~e~vG~eN~fiFG 760 (879)
T 1ygp_A 736 IIGTVDGANVEITREIGEDNVFLFG 760 (879)
T ss_dssp EEEESCTHHHHHHHHHCGGGSEEES
T ss_pred eeecccchhHHHHHHcCcccEEEcc
Confidence 999999988888765 45889985
No 64
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.98 E-value=1.5 Score=47.09 Aligned_cols=116 Identities=14% Similarity=0.236 Sum_probs=68.4
Q ss_pred HHcCCCCCC-EEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCC
Q 003758 94 KENGFLKDE-IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL 172 (797)
Q Consensus 94 ~klGL~~d~-~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~ 172 (797)
.+.|+..++ .+++..|+....|. +-.....+.+..|.. . ++++ ++.|...+. +..+++++..+..
T Consensus 177 ~~~g~~~~~~~i~i~pga~~~~k~--wp~~~~~~l~~~l~~-------~--g~~v-vl~g~~~e~--~~~~~i~~~~~~~ 242 (349)
T 3tov_A 177 SSHGLTDTDILIGFNIGSAVPEKR--WPAERFAHVADYFGR-------L--GYKT-VFFGGPMDL--EMVQPVVEQMETK 242 (349)
T ss_dssp HHTTCCTTCCEEEEECCCSSGGGC--CCHHHHHHHHHHHHH-------H--TCEE-EECCCTTTH--HHHHHHHHTCSSC
T ss_pred HHcCCCCCCCEEEEeCCCCCccCC--CCHHHHHHHHHHHHh-------C--CCeE-EEEeCcchH--HHHHHHHHhcccc
Confidence 455776544 45555666544432 334455555555532 1 3564 556654443 5556666654422
Q ss_pred CCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhh
Q 003758 173 EHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 232 (797)
Q Consensus 173 d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI 232 (797)
.+.+.| +..++..+++.||++|.. + + |..-+ |.|+|+|+|+-=-+..+...
T Consensus 243 --~~~l~g~~sl~e~~ali~~a~~~i~~---D--s-G~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 243 --PIVATGKFQLGPLAAAMNRCNLLITN---D--S-GPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp --CEECTTCCCHHHHHHHHHTCSEEEEE---S--S-HHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred --cEEeeCCCCHHHHHHHHHhCCEEEEC---C--C-CHHHH-HHhcCCCEEEEECCCCcccc
Confidence 466667 567899999999999985 2 2 33333 99999999985433333433
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=87.03 E-value=3.6 Score=42.85 Aligned_cols=135 Identities=14% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec
Q 003758 101 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180 (797)
Q Consensus 101 d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG 180 (797)
.+.+++..|+....|. +......+.+..|. + .++++ ++.+.++.+ .+..+++++ ..+ .+.+.|
T Consensus 178 ~~~i~l~pga~~~~k~--wp~~~~~~l~~~L~-------~--~~~~v-vl~~g~~~e-~~~~~~i~~--~~~--~~~l~g 240 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKH--WPEEHWRELIGLLA-------D--SGIRI-KLPWGAPHE-EERAKRLAE--GFA--YVEVLP 240 (326)
T ss_dssp TSEEEEECCCSSGGGS--CCHHHHHHHHHHTT-------T--TCCEE-EECCSSHHH-HHHHHHHHT--TCT--TEEECC
T ss_pred CCEEEEEeCCCCcccc--CCHHHHHHHHHHHH-------H--CCCcE-EEecCCHHH-HHHHHHHHh--hCC--cccccC
Confidence 3456666666544432 23344444444441 1 25774 454223321 123333333 233 356777
Q ss_pred --ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhc-CCeEEEEc-------CCCHHHHH
Q 003758 181 --FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE-GAQVIFFQ-------KDNPEGLS 250 (797)
Q Consensus 181 --~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~D-g~nG~Lfd-------~~D~eeLA 250 (797)
+..++..+++.||++|..- + |..=+ |.|+|+|+|+---+..+..... +.+..++. .-+++++.
T Consensus 241 ~~sl~el~ali~~a~l~I~~D-----S-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~ 313 (326)
T 2gt1_A 241 KMSLEGVARVLAGAKFVVSVD-----T-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVK 313 (326)
T ss_dssp CCCHHHHHHHHHTCSEEEEES-----S-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEecC-----C-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHH
Confidence 5678999999999999851 2 33333 8889999997532222222221 11122221 23578888
Q ss_pred HHHHHHHhC
Q 003758 251 RAFSLFISN 259 (797)
Q Consensus 251 eaI~~LLed 259 (797)
+++.++++.
T Consensus 314 ~~i~~~l~~ 322 (326)
T 2gt1_A 314 QFIEENAEK 322 (326)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHHHH
Confidence 888887764
No 66
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=86.02 E-value=8.6 Score=33.48 Aligned_cols=108 Identities=13% Similarity=0.027 Sum_probs=72.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---------cCEEEEccCCCCCCccHHHHHHHH---
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---------ADIVLYGSSQVEQGFPSLIVRAMT--- 215 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---------ADV~V~PS~~Ee~GFPlvLLEAMA--- 215 (797)
++++.+.+. ....+.......|... .|.......+....+.. .|++++-....+ .-|..+++.+.
T Consensus 5 ilivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~-~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 5 IFLVEDNKA-DIRLIQEALANSTVPH-EVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPK-KDGREVLAEIKSDP 81 (140)
T ss_dssp EEEECCCHH-HHHHHHHHHHTCSSCC-EEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSS-SCHHHHHHHHHHST
T ss_pred EEEEeCCHH-HHHHHHHHHHhcCCCc-eEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCc-ccHHHHHHHHHcCc
Confidence 456665443 2456666677666643 57777777777777764 788887443331 34677777776
Q ss_pred --hCCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 216 --FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 216 --~G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
..+|||.- ... ...+.+..|..+++..|-+.++|..+|..+++
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHH
Confidence 35787753 333 34555667888999999999999999998875
No 67
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=85.52 E-value=7.7 Score=34.98 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=75.4
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH-----------HcCEEEEccCCCCCCccHHHHHH
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL-----------MADIVLYGSSQVEQGFPSLIVRA 213 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~-----------aADV~V~PS~~Ee~GFPlvLLEA 213 (797)
.+ ++|+.+.+. ....+.......|... .|.......+....+. ..|++|+-....+ .-|..+++.
T Consensus 5 ~~-ILivddd~~-~~~~l~~~L~~~g~~~-~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~-~~g~~~~~~ 80 (152)
T 3heb_A 5 VT-IVMIEDDLG-HARLIEKNIRRAGVNN-EIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPD-MTGIDILKL 80 (152)
T ss_dssp CE-EEEECCCHH-HHHHHHHHHHHTTCCC-CEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSS-SBHHHHHHH
T ss_pred ce-EEEEeCCHH-HHHHHHHHHHhCCCcc-eEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCC-CcHHHHHHH
Confidence 45 466665543 2467777778878754 5777777777777664 3678887433331 457788888
Q ss_pred HHh-----CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 214 MTF-----GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 214 MA~-----G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.. ++|||.. ... ...+.+..|..+++..|-++++|.++|..+..
T Consensus 81 lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 81 VKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp HHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 765 5777753 333 24456677889999999999999999988853
No 68
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=85.52 E-value=7.1 Score=34.77 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=74.7
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~----- 216 (797)
..+ ++|+.+.+. ....+.......|... .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 5 ~~~-ILivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~ 80 (144)
T 3kht_A 5 SKR-VLVVEDNPD-DIALIRRVLDRKDIHC-QLEFVDNGAKALYQVQQAKYDLIILDIGLPI-ANGFEVMSAVRKPGANQ 80 (144)
T ss_dssp CEE-EEEECCCHH-HHHHHHHHHHHTTCCE-EEEEESSHHHHHHHHTTCCCSEEEECTTCGG-GCHHHHHHHHHSSSTTT
T ss_pred CCE-EEEEeCCHH-HHHHHHHHHHhcCCCe-eEEEECCHHHHHHHhhcCCCCEEEEeCCCCC-CCHHHHHHHHHhccccc
Confidence 356 466665543 2466677777777653 46666666666666654 577877433321 457778888765
Q ss_pred CCcEEEcC-CC---ChhHhhhcCCeEEEEcCC-CHHHHHHHHHHHHh
Q 003758 217 GIPVITPD-FP---IIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFIS 258 (797)
Q Consensus 217 G~PVIasd-~g---Gi~EiI~Dg~nG~Lfd~~-D~eeLAeaI~~LLe 258 (797)
++|||+-. .. ...+.+..|..+++..+. +.++|.++|..+++
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 81 HTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 67877543 22 344556778899999999 99999999998875
No 69
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=85.37 E-value=12 Score=33.23 Aligned_cols=112 Identities=13% Similarity=0.060 Sum_probs=75.1
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
...+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 7 ~~~~-iLivd~~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~ 80 (147)
T 2zay_A 7 KWWR-IMLVDTQLP-ALAASISALSQEGF---DIIQCGNAIEAVPVAVKTHPHLIITEANMPK-ISGMDLFNSLKKNPQT 80 (147)
T ss_dssp -CEE-EEEECTTGG-GGHHHHHHHHHHTE---EEEEESSHHHHHHHHHHHCCSEEEEESCCSS-SCHHHHHHHHHTSTTT
T ss_pred CCce-EEEEeCCHH-HHHHHHHHHHHcCC---eEEEeCCHHHHHHHHHcCCCCEEEEcCCCCC-CCHHHHHHHHHcCccc
Confidence 3456 466666544 24777777777666 36666666666665554 688887433321 456778888875
Q ss_pred -CCcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 217 -GIPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 217 -G~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
.+|||.- .... ..+.+..|..+++..+-+.++|..+|..++...
T Consensus 81 ~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 81 ASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp TTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 5787753 3332 344566788899999999999999999988643
No 70
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=83.40 E-value=14 Score=32.62 Aligned_cols=111 Identities=15% Similarity=0.047 Sum_probs=73.6
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH----HcCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL----MADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~----aADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
.+ ++|+.+.+. ....+.....+.|. .|.......+....+. ..|++|+-....+ .-|..+++.+.. .
T Consensus 4 ~~-ilivdd~~~-~~~~l~~~l~~~g~---~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~ 77 (143)
T 3jte_A 4 AK-ILVIDDEST-ILQNIKFLLEIDGN---EVLTASSSTEGLRIFTENCNSIDVVITDMKMPK-LSGMDILREIKKITPH 77 (143)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHTTTTCCEEEEESCCSS-SCHHHHHHHHHHHCTT
T ss_pred CE-EEEEcCCHH-HHHHHHHHHHhCCc---eEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCC-CcHHHHHHHHHHhCCC
Confidence 35 466665543 24566777776664 4666666666666665 5688887443331 456677776654 6
Q ss_pred CcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.- .... ..+.+..|..+++..+-+.++|..+|..+++...
T Consensus 78 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~~ 125 (143)
T 3jte_A 78 MAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINRKK 125 (143)
T ss_dssp CEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHHHH
Confidence 777653 3332 4556778889999999999999999999986443
No 71
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=83.22 E-value=10 Score=33.41 Aligned_cols=115 Identities=9% Similarity=-0.056 Sum_probs=74.5
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH-------cCEEEEccCCCCCCccHHHHHHHH
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM-------ADIVLYGSSQVEQGFPSLIVRAMT 215 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a-------ADV~V~PS~~Ee~GFPlvLLEAMA 215 (797)
...+ ++|+.+.+. ....+.......+... .|.......+....+.. .|++|+-....+ .-|..+++.+.
T Consensus 8 ~~~~-iLivdd~~~-~~~~l~~~l~~~~~~~-~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~ 83 (146)
T 3ilh_A 8 KIDS-VLLIDDDDI-VNFLNTTIIRMTHRVE-EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPG-INGWELIDLFK 83 (146)
T ss_dssp CEEE-EEEECSCHH-HHHHHHHHHHTTCCEE-EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSS-SCHHHHHHHHH
T ss_pred ccce-EEEEeCCHH-HHHHHHHHHHhcCCCe-eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCC-CCHHHHHHHHH
Confidence 3456 466665543 2355566666655532 46666666777777765 788887443332 45777788776
Q ss_pred h-------CCcEEEcCCC----ChhHhhhcC-CeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 216 F-------GIPVITPDFP----IIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 216 ~-------G~PVIasd~g----Gi~EiI~Dg-~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
. .+|||..... ...+.+..+ ..+++..|-++++|.++|.+......
T Consensus 84 ~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~~~~~ 141 (146)
T 3ilh_A 84 QHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVLNEGH 141 (146)
T ss_dssp HHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHHCC--
T ss_pred HhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHHHhcc
Confidence 5 5777654333 234455667 88999999999999999999987654
No 72
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=82.88 E-value=15 Score=32.04 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=72.0
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH---HcCEEEEccCCCCCCccHHHHHHHHh-----
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL---MADIVLYGSSQVEQGFPSLIVRAMTF----- 216 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~---aADV~V~PS~~Ee~GFPlvLLEAMA~----- 216 (797)
.+ ++++.+.+. ....+....++.|... |.......+....+. ..|++++-....+ .-|..+++.+..
T Consensus 6 ~~-iLivdd~~~-~~~~l~~~L~~~g~~~--v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~-~~g~~~~~~lr~~~~~~ 80 (129)
T 3h1g_A 6 MK-LLVVDDSST-MRRIIKNTLSRLGYED--VLEAEHGVEAWEKLDANADTKVLITDWNMPE-MNGLDLVKKVRSDSRFK 80 (129)
T ss_dssp CC-EEEECSCHH-HHHHHHHHHHHTTCCC--EEEESSHHHHHHHHHHCTTCCEEEECSCCSS-SCHHHHHHHHHTSTTCT
T ss_pred cE-EEEEeCCHH-HHHHHHHHHHHcCCcE--EEEeCCHHHHHHHHHhCCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCC
Confidence 45 466665543 2466677777777753 666665555444443 3678886333321 457788888764
Q ss_pred CCcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 217 GIPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 217 G~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
.+|||.. .... ..+.+..|..+|+..|-++++|.++|..++..
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 81 EIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 5787753 3332 34556678899999999999999999998864
No 73
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=82.58 E-value=12 Score=32.91 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=74.3
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH------------cCEEEEccCCCCCCccHHHH
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM------------ADIVLYGSSQVEQGFPSLIV 211 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a------------ADV~V~PS~~Ee~GFPlvLL 211 (797)
..+ ++++.+.+. ....+.......|... .|.......+....+.. .|++|+-....+ .-|..++
T Consensus 6 ~~~-iLivdd~~~-~~~~l~~~L~~~g~~~-~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~-~~g~~~~ 81 (149)
T 1k66_A 6 TQP-LLVVEDSDE-DFSTFQRLLQREGVVN-PIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPG-TDGREVL 81 (149)
T ss_dssp TSC-EEEECCCHH-HHHHHHHHHHHTTBCS-CEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSS-SCHHHHH
T ss_pred Ccc-EEEEECCHH-HHHHHHHHHHHcCCCc-eEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCC-CCHHHHH
Confidence 345 466665543 2456677777777643 47777777777777653 688887443331 3567778
Q ss_pred HHHH-----hCCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 212 RAMT-----FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 212 EAMA-----~G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.+. ..+|||.. ... ...+.+..|..+++..+-+.++|.++|..+++
T Consensus 82 ~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 82 QEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp HHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 8776 45787753 333 24455667888999999999999999988864
No 74
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=82.35 E-value=19 Score=31.56 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=75.1
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHH-cCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~e-lgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
..+ ++++.+.+. ....+...... .|.. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 8 ~~~-iLivdd~~~-~~~~l~~~L~~~~~~~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~ 82 (143)
T 3cnb_A 8 DFS-ILIIEDDKE-FADMLTQFLENLFPYA--KIKIAYNPFDAGDLLHTVKPDVVMLDLMMVG-MDGFSICHRIKSTPAT 82 (143)
T ss_dssp -CE-EEEECSCHH-HHHHHHHHHHHHCTTC--EEEEECSHHHHHHHHHHTCCSEEEEETTCTT-SCHHHHHHHHHTSTTT
T ss_pred Cce-EEEEECCHH-HHHHHHHHHHhccCcc--EEEEECCHHHHHHHHHhcCCCEEEEecccCC-CcHHHHHHHHHhCccc
Confidence 456 466665543 24566666666 6664 26777766666666654 588887443331 456777888765
Q ss_pred -CCcEEE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 -GIPVIT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 -G~PVIa-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||. +.... ..+.+..|..+++..+-++++|.++|..+++...
T Consensus 83 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 132 (143)
T 3cnb_A 83 ANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQKK 132 (143)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred cCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHhhc
Confidence 577775 33332 3456677888999999999999999999987654
No 75
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=81.47 E-value=15 Score=32.25 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=72.7
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
...+ ++++.+.+. ....+.......|. .|......++....+.. .|++|+-....+ .-|..+++.+..
T Consensus 6 ~~~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~ 79 (142)
T 3cg4_A 6 HKGD-VMIVDDDAH-VRIAVKTILSDAGF---HIISADSGGQCIDLLKKGFSGVVLLDIMMPG-MDGWDTIRAILDNSLE 79 (142)
T ss_dssp CCCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHTCCCEEEEEESCCSS-SCHHHHHHHHHHTTCC
T ss_pred CCCe-EEEEcCCHH-HHHHHHHHHHHCCe---EEEEeCCHHHHHHHHHhcCCCEEEEeCCCCC-CCHHHHHHHHHhhccc
Confidence 3456 466665543 24566666676665 46666666676666665 577776433321 456778888765
Q ss_pred -CCcEEEc-CC---CChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 217 -GIPVITP-DF---PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 217 -G~PVIas-d~---gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
.+|||.- .. ....+.+..|..+++..+-+.++|.++|..++.
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 80 QGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp TTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 4677643 22 244556667888999999999999999998875
No 76
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=81.12 E-value=19 Score=31.55 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=71.0
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
....+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+| . .-|..+++.+..
T Consensus 16 ~~~~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~dlvi~~---~--~~g~~~~~~l~~~~~ 85 (137)
T 2pln_A 16 RGSMR-VLLIEKNSV-LGGEIEKGLNVKGF---MADVTESLEDGEYLMDIRNYDLVMVS---D--KNALSFVSRIKEKHS 85 (137)
T ss_dssp TTCSE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHHHHHSCCSEEEEC---S--TTHHHHHHHHHHHST
T ss_pred CCCCe-EEEEeCCHH-HHHHHHHHHHHcCc---EEEEeCCHHHHHHHHHcCCCCEEEEc---C--ccHHHHHHHHHhcCC
Confidence 34567 466665543 24566666666665 46666666666666654 5788832 2 345667777654
Q ss_pred CCcEEEc-CCC---ChhHhhhcCCeEEEEcCC-CHHHHHHHHHHHHhC
Q 003758 217 GIPVITP-DFP---IIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFISN 259 (797)
Q Consensus 217 G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~-D~eeLAeaI~~LLed 259 (797)
.+|||.- ... ...+.+..|..+++..+- +.++|..+|..++..
T Consensus 86 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 86 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp TSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred CccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 7887753 333 345566778889999999 999999999988754
No 77
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=81.06 E-value=13 Score=33.94 Aligned_cols=108 Identities=12% Similarity=0.076 Sum_probs=70.8
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEE-EecChhhHHHHHHH----cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGDVNGVLLM----ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~-flG~~edl~~~L~a----ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
.+ ++|+.+.+. ....+.....+.|.. |. ......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 37 ~~-Ilivdd~~~-~~~~l~~~L~~~g~~---v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~-~~g~~~~~~lr~~~~ 110 (157)
T 3hzh_A 37 FN-VLIVDDSVF-TVKQLTQIFTSEGFN---IIDTAADGEEAVIKYKNHYPNIDIVTLXITMPK-MDGITCLSNIMEFDK 110 (157)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHHHGGGCCEEEECSSCSS-SCHHHHHHHHHHHCT
T ss_pred eE-EEEEeCCHH-HHHHHHHHHHhCCCe---EEEEECCHHHHHHHHHhcCCCCCEEEEeccCCC-ccHHHHHHHHHhhCC
Confidence 46 466665443 245666777766653 44 55566666666654 488887443331 456777776654
Q ss_pred CCcEEEcC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 217 GIPVITPD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 217 G~PVIasd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
.+|||... .. ...+.+..|..+++..+-+.++|.++|..+++
T Consensus 111 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 111 NARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 67877543 32 34456677889999999999999999998764
No 78
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=80.85 E-value=20 Score=30.79 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=70.9
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~----- 216 (797)
..+ ++++.+.+. ....+.......|.. .|.......+....+.. .|++++-..... .-|..+++.+..
T Consensus 4 ~~~-ilivdd~~~-~~~~l~~~l~~~~~~--~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~-~~g~~l~~~l~~~~~~~ 78 (128)
T 1jbe_A 4 ELK-FLVVDDFST-MRRIVRNLLKELGFN--NVEEAEDGVDALNKLQAGGYGFVISDWNMPN-MDGLELLKTIRAXXAMS 78 (128)
T ss_dssp TCC-EEEECSCHH-HHHHHHHHHHHTTCC--CEEEESSHHHHHHHHTTCCCCEEEEESCCSS-SCHHHHHHHHHC--CCT
T ss_pred ccE-EEEECCCHH-HHHHHHHHHHHcCCc--EEEeeCCHHHHHHHHHhcCCCEEEEeCCCCC-CCHHHHHHHHHhhcccC
Confidence 345 466665543 235566666666664 36666665565555543 578877433321 356778888764
Q ss_pred CCcEEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 217 GIPVIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 217 G~PVIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
.+|||. +... ...+.+..|..+++..|-+.++|.++|..++.
T Consensus 79 ~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 79 ALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp TCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHHHH
Confidence 567764 3333 24556677888999999999999999988764
No 79
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=80.69 E-value=19 Score=32.41 Aligned_cols=111 Identities=16% Similarity=0.152 Sum_probs=70.4
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~P 219 (797)
.+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+. ..+|
T Consensus 4 ~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dliild~~l~~-~~g~~~~~~l~~~~~~~p 77 (155)
T 1qkk_A 4 PS-VFLIDDDRD-LRKAMQQTLELAGF---TVSSFASATEALAGLSADFAGIVISDIRMPG-MDGLALFRKILALDPDLP 77 (155)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHTCCTTCCSEEEEESCCSS-SCHHHHHHHHHHHCTTSC
T ss_pred CE-EEEEeCCHH-HHHHHHHHHHHcCc---EEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCC
Confidence 35 456665543 23566666666665 36666655555554433 578877433321 34666677664 3688
Q ss_pred EEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 220 VITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 220 VIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
||.. ... ...+.+..|..+++..|-++++|..+|..++....
T Consensus 78 ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 78 MILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRR 123 (155)
T ss_dssp EEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHHHH
Confidence 7754 322 34556667888999999999999999999886443
No 80
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=80.25 E-value=28 Score=30.77 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=72.1
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHH--hCCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMT--FGIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA--~G~P 219 (797)
.+ ++|+.+.+. ....+.....+.|. .|.......+....+.. .|++|+-....+..-|..+++.+. ..+|
T Consensus 6 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3h5i_A 6 KK-ILIVEDSKF-QAKTIANILNKYGY---TVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELP 80 (140)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCC
T ss_pred cE-EEEEeCCHH-HHHHHHHHHHHcCC---EEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCC
Confidence 45 466665543 24566777777665 46666666666666643 588887443311134666677665 3788
Q ss_pred EEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 220 VITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 220 VIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
||.- ... ...+.+..|..+++..|-++++|..+|..+++.
T Consensus 81 ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 81 VVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 7753 222 455667778899999999999999999998863
No 81
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=79.50 E-value=22 Score=31.25 Aligned_cols=112 Identities=8% Similarity=0.028 Sum_probs=73.7
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~----- 216 (797)
..+ ++|+.+.+. ....+.....+.|. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 6 ~~~-iLivdd~~~-~~~~l~~~l~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~ 79 (140)
T 3grc_A 6 RPR-ILICEDDPD-IARLLNLMLEKGGF---DSDMVHSAAQALEQVARRPYAAMTVDLNLPD-QDGVSLIRALRRDSRTR 79 (140)
T ss_dssp CSE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEECSHHHHHHHHHHSCCSEEEECSCCSS-SCHHHHHHHHHTSGGGT
T ss_pred CCC-EEEEcCCHH-HHHHHHHHHHHCCC---eEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhCcccC
Confidence 356 466665543 24566666776665 46666666666666554 578877443331 457778888775
Q ss_pred CCcEEEcCCCCh----h-HhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 GIPVITPDFPII----K-EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 G~PVIasd~gGi----~-EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||.-....- . +.+..|..+++..|-+.++|..+|..+++...
T Consensus 80 ~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~~ 129 (140)
T 3grc_A 80 DLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNMA 129 (140)
T ss_dssp TCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhcC
Confidence 688876544322 2 34456778999999999999999999987543
No 82
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=79.37 E-value=17 Score=32.61 Aligned_cols=111 Identities=11% Similarity=0.007 Sum_probs=70.8
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH---------HcCEEEEccCCCCCCccHHHHHH
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL---------MADIVLYGSSQVEQGFPSLIVRA 213 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~---------aADV~V~PS~~Ee~GFPlvLLEA 213 (797)
...+ ++|+.+.+. ....+....+..+... .|.......+....+. ..|++++=-...+ .-|..+++.
T Consensus 7 ~~~~-ILivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~-~~g~~l~~~ 82 (149)
T 1i3c_A 7 PPKV-ILLVEDSKA-DSRLVQEVLKTSTIDH-ELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPK-KDGREVLAE 82 (149)
T ss_dssp CCEE-EEEECCCHH-HHHHHHHHHHSCCSCE-EEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSS-SCHHHHHHH
T ss_pred CCCe-EEEEECCHH-HHHHHHHHHHhcCCCc-cEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCC-CcHHHHHHH
Confidence 3456 466765543 2345556566555432 4666666666666665 3688887433321 346777887
Q ss_pred HHh-----CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 214 MTF-----GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 214 MA~-----G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
+.. .+|||.- ... ...+.+..|..+++..+-+.++|..+|..++
T Consensus 83 l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~ 135 (149)
T 1i3c_A 83 IKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIE 135 (149)
T ss_dssp HHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred HHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 763 5687653 333 2445567788999999999999999998775
No 83
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=79.01 E-value=17 Score=32.58 Aligned_cols=117 Identities=10% Similarity=0.094 Sum_probs=74.3
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
....+ ++|+.+.+. ....+.....+.+... .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 13 ~~~~~-iLivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~ 88 (152)
T 3eul_A 13 PEKVR-VVVGDDHPL-FREGVVRALSLSGSVN-VVGEADDGAAALELIKAHLPDVALLDYRMPG-MDGAQVAAAVRSYEL 88 (152)
T ss_dssp -CCEE-EEEECSSHH-HHHHHHHHHHHHSSEE-EEEEESSHHHHHHHHHHHCCSEEEEETTCSS-SCHHHHHHHHHHTTC
T ss_pred CceEE-EEEEcCCHH-HHHHHHHHHhhCCCeE-EEEEeCCHHHHHHHHHhcCCCEEEEeCCCCC-CCHHHHHHHHHhcCC
Confidence 35567 467765543 2456667777666432 34455565565555543 678877433331 456777777664
Q ss_pred CCcEEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 003758 217 GIPVIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 262 (797)
Q Consensus 217 G~PVIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel 262 (797)
.+|||. +... ...+.+..|..+++..+.+.++|.++|..++.....
T Consensus 89 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~~~ 138 (152)
T 3eul_A 89 PTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDV 138 (152)
T ss_dssp SCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHCC--
T ss_pred CCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcCCee
Confidence 467765 3333 244567778899999999999999999999986553
No 84
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=78.26 E-value=20 Score=31.54 Aligned_cols=110 Identities=7% Similarity=0.002 Sum_probs=73.4
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--------cCEEEEccCCCCCCccHHHHHHHH-
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--------ADIVLYGSSQVEQGFPSLIVRAMT- 215 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--------ADV~V~PS~~Ee~GFPlvLLEAMA- 215 (797)
.+ ++|+.+.+. ....+.....+.|... .|.......+....+.. .|++|+-....+ .-|..+++.+.
T Consensus 8 ~~-ILivdd~~~-~~~~l~~~L~~~g~~~-~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~-~~g~~~~~~l~~ 83 (143)
T 2qvg_A 8 VD-ILYLEDDEV-DIQSVERVFHKISSLI-KIEIAKSGNQALDMLYGRNKENKIHPKLILLDINIPK-MNGIEFLKELRD 83 (143)
T ss_dssp CS-EEEECCCHH-HHHHHHHHHHHHCTTC-CEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTT-SCHHHHHHHHTT
T ss_pred Ce-EEEEeCCHH-HHHHHHHHHHHhCCCc-eEEEECCHHHHHHHHHhcccccCCCCCEEEEecCCCC-CCHHHHHHHHHc
Confidence 45 466665543 2456677777777743 57777777777777764 688887433321 34667777775
Q ss_pred ----hCCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 216 ----FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 216 ----~G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
..+|||.. ... ...+.+..|..+++..|-++++|.+++.....
T Consensus 84 ~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~~~~~ 134 (143)
T 2qvg_A 84 DSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFWILQS 134 (143)
T ss_dssp SGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHHHHHH
Confidence 46787653 333 34455667888999999999999999776544
No 85
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=78.00 E-value=17 Score=32.56 Aligned_cols=115 Identities=14% Similarity=0.144 Sum_probs=73.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
...+ ++|+.+.+. ....+.......+... .|.......+....+.. .|++|+-....+ .-|..+++.+.. .
T Consensus 19 ~m~~-iLivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~al~~l~~~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~ 94 (150)
T 4e7p_A 19 SHMK-VLVAEDQSM-LRDAMCQLLTLQPDVE-SVLQAKNGQEAIQLLEKESVDIAILDVEMPV-KTGLEVLEWIRSEKLE 94 (150)
T ss_dssp -CEE-EEEECSCHH-HHHHHHHHHHTSTTEE-EEEEESSHHHHHHHHTTSCCSEEEECSSCSS-SCHHHHHHHHHHTTCS
T ss_pred CccE-EEEEcCCHH-HHHHHHHHHHhCCCcE-EEEEECCHHHHHHHhhccCCCEEEEeCCCCC-CcHHHHHHHHHHhCCC
Confidence 3456 466665443 2345555555443222 45556666666666654 578877443331 456777777765 5
Q ss_pred CcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.- ... ...+.+..|..+++..+-++++|.++|..+++...
T Consensus 95 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~~ 142 (150)
T 4e7p_A 95 TKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRK 142 (150)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTTCC
T ss_pred CeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcCCE
Confidence 776643 333 35556778889999999999999999999998654
No 86
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=77.85 E-value=27 Score=30.38 Aligned_cols=112 Identities=9% Similarity=0.001 Sum_probs=71.6
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
..+ ++|+.+.+. ....+....++.|.. |.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 7 ~~~-ilivdd~~~-~~~~l~~~L~~~g~~---v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~ 80 (136)
T 3hdv_A 7 RPL-VLVVDDNAV-NREALILYLKSRGID---AVGADGAEEARLYLHYQKRIGLMITDLRMQP-ESGLDLIRTIRASERA 80 (136)
T ss_dssp CCE-EEEECSCHH-HHHHHHHHHHHTTCC---EEEESSHHHHHHHHHHCTTEEEEEECSCCSS-SCHHHHHHHHHTSTTT
T ss_pred CCe-EEEECCCHH-HHHHHHHHHHHcCce---EEEeCCHHHHHHHHHhCCCCcEEEEeccCCC-CCHHHHHHHHHhcCCC
Confidence 356 466665543 246667777777763 5556655555555543 577777433321 457778887764
Q ss_pred CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||.. ... ...+.+..|..+++..|-+.++|.++|.++.....
T Consensus 81 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~~ 129 (136)
T 3hdv_A 81 ALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKIGE 129 (136)
T ss_dssp TCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC---
T ss_pred CCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHhcCch
Confidence 3677753 333 24556677889999999999999999999987554
No 87
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=77.56 E-value=21 Score=32.32 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=73.8
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----h
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-----F 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-----~ 216 (797)
..+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+. .
T Consensus 7 ~~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~ 80 (154)
T 3gt7_A 7 AGE-ILIVEDSPT-QAEHLKHILEETGY---QTEHVRNGREAVRFLSLTRPDLIISDVLMPE-MDGYALCRWLKGQPDLR 80 (154)
T ss_dssp CCE-EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHTTCCCSEEEEESCCSS-SCHHHHHHHHHHSTTTT
T ss_pred CCc-EEEEeCCHH-HHHHHHHHHHHCCC---EEEEeCCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhCCCcC
Confidence 456 466665543 24566666666564 46666666666666654 578887443331 45777888776 3
Q ss_pred CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||.. ... ...+.+..|..+++..|-++++|..+|..++....
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~ 129 (154)
T 3gt7_A 81 TIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSGVK 129 (154)
T ss_dssp TSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 5787753 333 34455667888999999999999999999987443
No 88
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=77.32 E-value=26 Score=29.73 Aligned_cols=108 Identities=11% Similarity=0.085 Sum_probs=70.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----hCCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-----FGIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-----~G~PV 220 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-.......-|..+++.+. ..+||
T Consensus 8 ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~i 83 (127)
T 2gkg_A 8 ILIVESDTA-LSATLRSALEGRGF---TVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPI 83 (127)
T ss_dssp EEEECSCHH-HHHHHHHHHHHHTC---EEEEECCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCE
T ss_pred EEEEeCCHH-HHHHHHHHHHhcCc---eEEEecCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCE
Confidence 466665543 24566666666666 36666665565555543 578876332210144677788775 36888
Q ss_pred EEcCCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 221 ITPDFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 221 Iasd~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|.. .. ...+.+..|..+++..|-++++|..+|..++..+
T Consensus 84 i~~-~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 84 VII-GNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALIGFP 126 (127)
T ss_dssp EEE-ECGGGHHHHHHSTTCCSEEEESSCCHHHHHHHHHHHHCCC
T ss_pred EEE-ecCCchhHHHHHHhCcchheeCCCCHHHHHHHHHHHHcCC
Confidence 877 33 2344556778899999999999999999988654
No 89
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=77.23 E-value=12 Score=33.67 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=71.7
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHc-CCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~el-gL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
.+ ++|+.+.+. ....+.....+. |.. .|.......+....+.. .|++|+-....+ .-|..+++.+.. +
T Consensus 4 ~~-iLivdd~~~-~~~~l~~~L~~~~g~~--~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~ 78 (154)
T 2qsj_A 4 TV-VLIVDDHHL-IRAGAKNLLEGAFSGM--RVEGAETVSDALAFLEADNTVDLILLDVNLPD-AEAIDGLVRLKRFDPS 78 (154)
T ss_dssp EE-EEEECSCHH-HHHHHHHHHHHHCTTE--EEEEESSHHHHHHHHHTTCCCSEEEECC-------CHHHHHHHHHHCTT
T ss_pred cE-EEEEcCCHH-HHHHHHHHHHhCCCce--EEEEecCHHHHHHHHhccCCCCEEEEeCCCCC-CchHHHHHHHHHhCCC
Confidence 45 466665443 245666666665 553 46667777777777765 688887433321 346667777653 6
Q ss_pred CcEEEcCCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITPDFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.-... ...+.+..|..+++..+-+.++|..+|..++....
T Consensus 79 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~~~~ 126 (154)
T 2qsj_A 79 NAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEGEI 126 (154)
T ss_dssp SEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTTCC
T ss_pred CeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHHcCCE
Confidence 788764322 34556677888999999999999999999987544
No 90
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=76.87 E-value=41 Score=30.05 Aligned_cols=110 Identities=9% Similarity=-0.008 Sum_probs=68.3
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh---CC
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF---GI 218 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~---G~ 218 (797)
.+ ++|+.+.+.. ...+....+. + - .|.......+....+.. .|++|+-....+ .-|..+++.+.. .+
T Consensus 5 ~~-ILivdd~~~~-~~~l~~~L~~-~--~-~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ 77 (151)
T 3kcn_A 5 ER-ILLVDDDYSL-LNTLKRNLSF-D--F-EVTTCESGPEALACIKKSDPFSVIMVDMRMPG-MEGTEVIQKARLISPNS 77 (151)
T ss_dssp CE-EEEECSCHHH-HHHHHHHHTT-T--S-EEEEESSHHHHHHHHHHSCCCSEEEEESCCSS-SCHHHHHHHHHHHCSSC
T ss_pred Ce-EEEEeCCHHH-HHHHHHHhcc-C--c-eEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCC-CcHHHHHHHHHhcCCCc
Confidence 45 4666655421 2334443332 3 2 57766666676666654 388887433321 456677776654 67
Q ss_pred cEEEc-CCC---ChhHhhhcC-CeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 219 PVITP-DFP---IIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 219 PVIas-d~g---Gi~EiI~Dg-~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
|||.- ... ...+.+..| ..+++..|-+.++|..+|..+++...
T Consensus 78 ~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~l~~~~ 125 (151)
T 3kcn_A 78 VYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKAAINAGIKQYD 125 (151)
T ss_dssp EEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 77653 333 244556667 78999999999999999999986443
No 91
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=76.70 E-value=30 Score=30.34 Aligned_cols=108 Identities=9% Similarity=0.120 Sum_probs=69.3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH-------cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM-------ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a-------ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
++|+.+.+. ....+....+..|.. .|.......+....+.. .|++++=-...+ .-|..+++.+..
T Consensus 5 ILivdD~~~-~~~~l~~~L~~~g~~--~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~-~~G~~~~~~lr~~~~~ 80 (133)
T 2r25_B 5 ILVVEDNHV-NQEVIKRMLNLEGIE--NIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPK-VDGLLSTKMIRRDLGY 80 (133)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTCC--CEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSS-SCHHHHHHHHHHHSCC
T ss_pred EEEEcCCHH-HHHHHHHHHHHcCCc--eEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCC-CChHHHHHHHHhhcCC
Confidence 466665543 235566666666654 36666665565555543 588887333321 346777777753
Q ss_pred CCcEEE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 217 GIPVIT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 217 G~PVIa-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
.+|||. |.... ..+.+..|..+|+..|-+.++|.++|..++..
T Consensus 81 ~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 127 (133)
T 2r25_B 81 TSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCAA 127 (133)
T ss_dssp CSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 468764 44433 34556678889999999999999999988753
No 92
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=76.64 E-value=34 Score=30.11 Aligned_cols=111 Identities=10% Similarity=0.070 Sum_probs=70.9
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G 217 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .
T Consensus 5 ~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~-~~g~~~~~~lr~~~~~~~ 78 (136)
T 3t6k_A 5 HT-LLIVDDDDT-VAEMLELVLRGAGY---EVRRAASGEEALQQIYKNLPDALICDVLLPG-IDGYTLCKRVRQHPLTKT 78 (136)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHHSGGGTT
T ss_pred CE-EEEEeCCHH-HHHHHHHHHHHCCC---EEEEeCCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHcCCCcCC
Confidence 35 466665543 24566666666665 36656665565555544 588887433331 446777877754 5
Q ss_pred CcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.- .... ..+.+..|..+|+..|-++++|..+|..++....
T Consensus 79 ~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~l~~~~ 126 (136)
T 3t6k_A 79 LPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNILARTT 126 (136)
T ss_dssp CCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHHHHHHHHC--
T ss_pred ccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHhccC
Confidence 787753 3332 3445667888999999999999999999987543
No 93
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=76.37 E-value=29 Score=32.04 Aligned_cols=111 Identities=11% Similarity=0.078 Sum_probs=73.0
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT----- 215 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA----- 215 (797)
.+.+ ++|+-+.+.. ...+....+..|+.. |.......+..+.+.. .|++++=-...+ --|..+++.+.
T Consensus 11 k~~r-ILiVDD~~~~-r~~l~~~L~~~G~~~--v~~a~~g~~al~~~~~~~~DlillD~~MP~-mdG~el~~~ir~~~~~ 85 (134)
T 3to5_A 11 KNMK-ILIVDDFSTM-RRIVKNLLRDLGFNN--TQEADDGLTALPMLKKGDFDFVVTDWNMPG-MQGIDLLKNIRADEEL 85 (134)
T ss_dssp TTCC-EEEECSCHHH-HHHHHHHHHHTTCCC--EEEESSHHHHHHHHHHHCCSEEEEESCCSS-SCHHHHHHHHHHSTTT
T ss_pred CCCE-EEEEeCCHHH-HHHHHHHHHHcCCcE--EEEECCHHHHHHHHHhCCCCEEEEcCCCCC-CCHHHHHHHHHhCCCC
Confidence 4567 4666554432 456667777888763 6555555555555554 578776322221 34788888885
Q ss_pred hCCcEEE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 216 FGIPVIT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 216 ~G~PVIa-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
..+|||. |..+. ..+...-|.++|+..|-++++|.++|.++++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4688875 33332 3345567889999999999999999998864
No 94
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=75.98 E-value=36 Score=29.23 Aligned_cols=110 Identities=11% Similarity=0.044 Sum_probs=69.7
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~P 219 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++++-..... .-|..+++.+.. .+|
T Consensus 4 ~~-ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ 77 (126)
T 1dbw_A 4 YT-VHIVDDEEP-VRKSLAFMLTMNGF---AVKMHQSAEAFLAFAPDVRNGVLVTDLRMPD-MSGVELLRNLGDLKINIP 77 (126)
T ss_dssp CE-EEEEESSHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHHGGGCCSEEEEEECCSTT-SCHHHHHHHHHHTTCCCC
T ss_pred CE-EEEEcCCHH-HHHHHHHHHHhCCc---EEEEeCCHHHHHHHHhcCCCCEEEEECCCCC-CCHHHHHHHHHhcCCCCC
Confidence 45 466665543 23555666665554 35555555566555554 577776332221 346667777653 578
Q ss_pred EEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 220 VIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 220 VIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
||. +... ...+.+..|..+++..|-+.++|.++|..++...
T Consensus 78 ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~~ 122 (126)
T 1dbw_A 78 SIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEHL 122 (126)
T ss_dssp EEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHHhh
Confidence 775 3333 2455566788999999999999999999987644
No 95
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=75.78 E-value=36 Score=28.89 Aligned_cols=107 Identities=9% Similarity=0.055 Sum_probs=67.3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----CCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----GIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G~PV 220 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .+||
T Consensus 4 ilivdd~~~-~~~~l~~~L~~~~~---~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~i 78 (124)
T 1mb3_A 4 VLIVEDNEL-NMKLFHDLLEAQGY---ETLQTREGLSALSIARENKPDLILMDIQLPE-ISGLEVTKWLKEDDDLAHIPV 78 (124)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHHHHHHCCSEEEEESBCSS-SBHHHHHHHHHHSTTTTTSCE
T ss_pred EEEEcCCHH-HHHHHHHHHHHcCc---EEEEeCCHHHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHcCccccCCcE
Confidence 456665543 24556666666555 35445554454444443 688887433321 346777887763 5788
Q ss_pred EEcC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITPD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Iasd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.-. .. ...+.+..|..+++..|-++++|..++..++..
T Consensus 79 i~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 79 VAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLER 121 (124)
T ss_dssp EEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHSC
T ss_pred EEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 7542 22 345566678889999999999999999988754
No 96
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=74.98 E-value=30 Score=31.01 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=70.6
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
...+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .
T Consensus 6 ~~~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~ 79 (154)
T 2rjn_A 6 KNYT-VMLVDDEQP-ILNSLKRLIKRLGC---NIITFTSPLDALEALKGTSVQLVISDMRMPE-MGGEVFLEQVAKSYPD 79 (154)
T ss_dssp SCCE-EEEECSCHH-HHHHHHHHHHTTTC---EEEEESCHHHHHHHHTTSCCSEEEEESSCSS-SCHHHHHHHHHHHCTT
T ss_pred CCCe-EEEEcCCHH-HHHHHHHHHHHcCC---eEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CCHHHHHHHHHHhCCC
Confidence 4566 466665543 23555666665554 46666666666666654 588887433321 346667776643 6
Q ss_pred CcEEEc-CCC---ChhHhhhcC-CeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 218 IPVITP-DFP---IIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg-~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
+|||.- ... ...+.+..| ..+++..|-++++|..+|..++...
T Consensus 80 ~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 80 IERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp SEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHHHHHHHHHHH
Confidence 787754 333 234445555 7899999999999999999887533
No 97
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=74.68 E-value=34 Score=29.48 Aligned_cols=106 Identities=13% Similarity=0.049 Sum_probs=68.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----CCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----GIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G~PV 220 (797)
++++.+.+. ....+....+..|. .|.......+....+.. .|++++=....+ .-|..+++.+.. .+||
T Consensus 5 ILivdd~~~-~~~~l~~~l~~~g~---~v~~~~~~~~al~~l~~~~~dlvllD~~~p~-~~g~~~~~~l~~~~~~~~~pi 79 (122)
T 3gl9_A 5 VLLVDDSAV-LRKIVSFNLKKEGY---EVIEAENGQIALEKLSEFTPDLIVLXIMMPV-MDGFTVLKKLQEKEEWKRIPV 79 (122)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHTTBCCSEEEECSCCSS-SCHHHHHHHHHTSTTTTTSCE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCc---EEEEeCCHHHHHHHHHhcCCCEEEEeccCCC-CcHHHHHHHHHhcccccCCCE
Confidence 456665543 23555666666665 35556666666666654 578877433321 457778888753 5787
Q ss_pred EE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 221 IT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 221 Ia-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
|. |.... ..+.+..|..+|+..|-++++|..++..+++
T Consensus 80 i~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 80 IVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp EEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred EEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 75 33332 3445667888999999999999999998874
No 98
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=74.63 E-value=26 Score=30.63 Aligned_cols=111 Identities=13% Similarity=0.074 Sum_probs=72.0
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CC
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GI 218 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~ 218 (797)
..+ ++|+.+.+. ....+.....+.+. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .+
T Consensus 7 ~~~-ilivdd~~~-~~~~l~~~L~~~~~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~ 80 (137)
T 3hdg_A 7 ALK-ILIVEDDTD-AREWLSTIISNHFP---EVWSAGDGEEGERLFGLHAPDVIITDIRMPK-LGGLEMLDRIKAGGAKP 80 (137)
T ss_dssp CCC-EEEECSCHH-HHHHHHHHHHTTCS---CEEEESSHHHHHHHHHHHCCSEEEECSSCSS-SCHHHHHHHHHHTTCCC
T ss_pred ccE-EEEEeCCHH-HHHHHHHHHHhcCc---EEEEECCHHHHHHHHhccCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCC
Confidence 356 466665543 23555666665333 46677766666655554 678887443331 456777777664 57
Q ss_pred cEEEcCCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 219 PVITPDFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 219 PVIasd~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|||..... ...+.+..|..+++..|-++++|.++|.++++..
T Consensus 81 ~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 81 YVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp EEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHHHHH
T ss_pred cEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHHHH
Confidence 77764333 3445567788899999999999999999998643
No 99
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=72.82 E-value=11 Score=33.19 Aligned_cols=112 Identities=6% Similarity=-0.059 Sum_probs=72.5
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHH-cCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh----
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF---- 216 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~e-lgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~---- 216 (797)
.+ ++|+.+.+. ....+.....+ .|. .|.......+....+.. .|++|+-....+..-|..+++.+..
T Consensus 5 ~~-ilivdd~~~-~~~~l~~~L~~~~~~---~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~ 79 (140)
T 3lua_A 5 GT-VLLIDYFEY-EREKTKIIFDNIGEY---DFIEVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRT 79 (140)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHHCCC---EEEEECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGG
T ss_pred Ce-EEEEeCCHH-HHHHHHHHHHhccCc---cEEEECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCccc
Confidence 45 466665543 24566666666 565 36666666666666655 6888874332200345677777665
Q ss_pred -CCcEEEcC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 -GIPVITPD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 -G~PVIasd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||.-. .. ...+.+..|..+++..|-++++|.++|..+++...
T Consensus 80 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~~ 129 (140)
T 3lua_A 80 ANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKICQ 129 (140)
T ss_dssp TTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC--
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhcc
Confidence 78887543 32 34455677889999999999999999999987554
No 100
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=72.51 E-value=11 Score=33.50 Aligned_cols=112 Identities=10% Similarity=0.123 Sum_probs=71.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcC-CCCCeEEEec-ChhhHHHHH---HHcCEEEEccCCCCCCccHHHHHHHHh-
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLG-LLEHSVRHYG-FNGDVNGVL---LMADIVLYGSSQVEQGFPSLIVRAMTF- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elg-L~d~~V~flG-~~edl~~~L---~aADV~V~PS~~Ee~GFPlvLLEAMA~- 216 (797)
...+ ++|+.+.+. ....+.......| +. |.... ..+.+..+. ...|++|+-....+ .-|..+++.+..
T Consensus 19 ~~~~-ilivdd~~~-~~~~l~~~L~~~g~~~---v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~ 92 (146)
T 4dad_A 19 GMIN-ILVASEDAS-RLAHLARLVGDAGRYR---VTRTVGRAAQIVQRTDGLDAFDILMIDGAALD-TAELAAIEKLSRL 92 (146)
T ss_dssp GGCE-EEEECSCHH-HHHHHHHHHHHHCSCE---EEEECCCHHHHTTCHHHHTTCSEEEEECTTCC-HHHHHHHHHHHHH
T ss_pred CCCe-EEEEeCCHH-HHHHHHHHHhhCCCeE---EEEeCCHHHHHHHHHhcCCCCCEEEEeCCCCC-ccHHHHHHHHHHh
Confidence 3456 466665543 2466777777777 43 44444 333454444 35788887443321 345666666554
Q ss_pred --CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 217 --GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 217 --G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
.+|||.- ... ...+.+..|..+++..+-++++|..+|..+++..
T Consensus 93 ~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~~ 142 (146)
T 4dad_A 93 HPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAAQC 142 (146)
T ss_dssp CTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHhhh
Confidence 6787753 333 3445667788999999999999999999998754
No 101
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=72.13 E-value=32 Score=29.92 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=69.7
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCC----CCccHHHHHHHH---
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVE----QGFPSLIVRAMT--- 215 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee----~GFPlvLLEAMA--- 215 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ ..-|..+++.+.
T Consensus 4 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~ 78 (140)
T 2qr3_A 4 GT-IIIVDDNKG-VLTAVQLLLKNHFS---KVITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQY 78 (140)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHTTTSS---EEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHC
T ss_pred ce-EEEEeCCHH-HHHHHHHHHHhCCc---EEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhC
Confidence 45 466665442 13445555554444 46666666666666665 467776332210 134666677665
Q ss_pred hCCcEEEcC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 216 FGIPVITPD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 216 ~G~PVIasd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
..+|||.-. .. ...+.+..|..+++..+-+.++|.++|..++....
T Consensus 79 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~~ 128 (140)
T 2qr3_A 79 RDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQKLLETLLNAASQAK 128 (140)
T ss_dssp TTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHTCC-
T ss_pred cCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHHHHHHHHHHHHhcc
Confidence 368877542 22 34556667888999999999999999999987654
No 102
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=71.94 E-value=49 Score=28.69 Aligned_cols=112 Identities=12% Similarity=0.011 Sum_probs=71.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEE-EecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH--hC
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT--FG 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~-flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA--~G 217 (797)
...+ ++++.+.+. ....+.......|.. |. ......+....+.. .|++|+-.......-|..+++.+. ..
T Consensus 8 ~~~~-iLivdd~~~-~~~~l~~~L~~~g~~---v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~ 82 (140)
T 3cg0_A 8 DLPG-VLIVEDGRL-AAATLRIQLESLGYD---VLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCN 82 (140)
T ss_dssp CCCE-EEEECCBHH-HHHHHHHHHHHHTCE---EEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSC
T ss_pred CCce-EEEEECCHH-HHHHHHHHHHHCCCe---eEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCC
Confidence 4567 466665543 245666667766663 55 35555565555544 688887433320034566666665 47
Q ss_pred CcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 218 IPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 218 ~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
+|||.- .... ..+.+..|..+++..+-+.++|..+|..+++.
T Consensus 83 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 83 LPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp CCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 888753 3332 34556678889999999999999999998763
No 103
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=71.39 E-value=41 Score=30.14 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=71.5
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hC
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FG 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G 217 (797)
...+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+. ..
T Consensus 13 ~~~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~ 86 (153)
T 3hv2_A 13 RRPE-ILLVDSQEV-ILQRLQQLLSPLPY---TLHFARDATQALQLLASREVDLVISAAHLPQ-MDGPTLLARIHQQYPS 86 (153)
T ss_dssp SCCE-EEEECSCHH-HHHHHHHHHTTSSC---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHHHCTT
T ss_pred CCce-EEEECCCHH-HHHHHHHHhcccCc---EEEEECCHHHHHHHHHcCCCCEEEEeCCCCc-CcHHHHHHHHHhHCCC
Confidence 3456 466665543 23455555555553 46666666666666654 578877443331 45677777765 36
Q ss_pred CcEEEcCC-C---ChhHhhhcC-CeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 218 IPVITPDF-P---IIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 218 ~PVIasd~-g---Gi~EiI~Dg-~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
+|||.-.. . ...+.+..| ..+++..|-++++|..+|..+++..
T Consensus 87 ~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 87 TTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp SEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHHh
Confidence 78775433 3 244556667 7899999999999999999998643
No 104
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=71.15 E-value=50 Score=28.94 Aligned_cols=112 Identities=10% Similarity=0.015 Sum_probs=68.9
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHc-CCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~el-gL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
...+ ++|+.+.+. ....+....... +.. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 8 ~~~~-iLivdd~~~-~~~~l~~~L~~~~~~~--~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~ 82 (143)
T 2qv0_A 8 EKMK-VIIVEDEFL-AQQELSWLINTHSQME--IVGSFDDGLDVLKFLQHNKVDAIFLDINIPS-LDGVLLAQNISQFAH 82 (143)
T ss_dssp --CE-EEEECSCHH-HHHHHHHHHHHHSCCE--EEEEESCHHHHHHHHHHCCCSEEEECSSCSS-SCHHHHHHHHTTSTT
T ss_pred CceE-EEEEcCCHH-HHHHHHHHHHhCCCce--EEEEeCCHHHHHHHHHhCCCCEEEEecCCCC-CCHHHHHHHHHccCC
Confidence 3456 466665543 235555555554 332 24344555565555554 588887443331 456777887764
Q ss_pred CCcEE-EcCC-CChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 217 GIPVI-TPDF-PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 217 G~PVI-asd~-gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
..||| .+.. ....+.+..|..+++..|-+.++|..+|..++..
T Consensus 83 ~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 83 KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp CCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 34454 3332 3456667788899999999999999999988753
No 105
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=70.87 E-value=35 Score=29.41 Aligned_cols=112 Identities=11% Similarity=0.058 Sum_probs=68.2
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
...+ ++++.+.+. ....+.....+.|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .
T Consensus 6 ~~~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~ 79 (130)
T 3eod_A 6 VGKQ-ILIVEDEQV-FRSLLDSWFSSLGA---TTVLAADGVDALELLGGFTPDLMICDIAMPR-MNGLKLLEHIRNRGDQ 79 (130)
T ss_dssp TTCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHHHTTCCCSEEEECCC------CHHHHHHHHHTTCC
T ss_pred CCCe-EEEEeCCHH-HHHHHHHHHHhCCc---eEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CCHHHHHHHHHhcCCC
Confidence 3456 466665543 24566677777665 35556666666666644 578887433321 456777777664 4
Q ss_pred CcEEEc-CCC---ChhHhhhcCCeEEEEcCC-CHHHHHHHHHHHHhCc
Q 003758 218 IPVITP-DFP---IIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFISNG 260 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~-D~eeLAeaI~~LLedp 260 (797)
+|||.- ... ...+.+..|..+++..|- +++.|.+++..++...
T Consensus 80 ~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l~~~ 127 (130)
T 3eod_A 80 TPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPS 127 (130)
T ss_dssp CCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHHHHC--
T ss_pred CCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHhchh
Confidence 677653 333 234566778899999988 8999999999988644
No 106
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=70.29 E-value=37 Score=29.63 Aligned_cols=113 Identities=12% Similarity=0.081 Sum_probs=68.7
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH-cCEEEEccCCCCCCccHHHHHHHHh------
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM-ADIVLYGSSQVEQGFPSLIVRAMTF------ 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a-ADV~V~PS~~Ee~GFPlvLLEAMA~------ 216 (797)
..+ ++++.+.+. ....+.......|. .|.......+....+.. .|++++--...+ .-|..+++.+..
T Consensus 7 ~~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~~~~~~dlvllD~~lp~-~~g~~~~~~l~~~~~~~~ 80 (136)
T 1dcf_A 7 GLK-VLVMDENGV-SRMVTKGLLVHLGC---EVTTVSSNEECLRVVSHEHKVVFMDVCMPG-VENYQIALRIHEKFTKQR 80 (136)
T ss_dssp TCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHCCTTCSEEEEECCSST-TTTTHHHHHHHHHHC-CC
T ss_pred CCe-EEEEeCCHH-HHHHHHHHHHHcCC---eEEEeCCHHHHHHHHhccCCEEEEeCCCCC-CcHHHHHHHHHHhhhhcc
Confidence 456 466665543 23555666666554 35555555555554432 388887332221 335666777641
Q ss_pred -CCc-EE-EcCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 003758 217 -GIP-VI-TPDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 262 (797)
Q Consensus 217 -G~P-VI-asd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel 262 (797)
..| || .+.... ..+.+..|..+++..|-++++|.+++..++.....
T Consensus 81 ~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~~~~ 132 (136)
T 1dcf_A 81 HQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPRVL 132 (136)
T ss_dssp SCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHSCCCC
T ss_pred CCCceEEEEeCCCCHHHHHHHHHcCCCeEEECCCCHHHHHHHHHHHhchhhh
Confidence 244 54 454443 33456678889999999999999999999875543
No 107
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=70.20 E-value=41 Score=28.87 Aligned_cols=111 Identities=12% Similarity=0.087 Sum_probs=67.1
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
..+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+-....+..-|..+++.+.. .
T Consensus 5 ~~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~ 79 (132)
T 2rdm_A 5 AVT-ILLADDEAI-LLLDFESTLTDAGF---LVTAVSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPN 79 (132)
T ss_dssp SCE-EEEECSSHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTT
T ss_pred Cce-EEEEcCcHH-HHHHHHHHHHHcCC---EEEEECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCC
Confidence 356 466665543 23556666666665 35556666666666654 5888874333210235666776653 6
Q ss_pred CcEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.. .... ....+..+ +++..|-++++|..+|.+++....
T Consensus 80 ~~ii~~s~~~~~~~~~~~~~~~--~~l~kP~~~~~l~~~i~~~~~~~~ 125 (132)
T 2rdm_A 80 MPIVYISGHAALEWASNGVPDS--IILEKPFTSAQLITAVSQLLNARE 125 (132)
T ss_dssp CCEEEEESSCCTTHHHHSCTTC--EEEESSCCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCccHHHHHhhcCCc--ceEeCCCCHHHHHHHHHHHHhcCC
Confidence 787753 3222 22223333 799999999999999999987654
No 108
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=70.10 E-value=54 Score=28.47 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=68.3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++++.+.+. ....+....+..|. .|.......+....+.. .|++++-....+ .-|..+++.+. .++|||.
T Consensus 6 Ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 80 (132)
T 3crn_A 6 ILIVDDDTA-ILDSTKQILEFEGY---EVEIAATAGEGLAKIENEFFNLALFXIKLPD-MEGTELLEKAHKLRPGMKKIM 80 (132)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEECSBCSS-SBHHHHHHHHHHHCTTSEEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCc---eEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CchHHHHHHHHhhCCCCcEEE
Confidence 466665543 23555666665554 46666665565555554 588887433321 34666777664 3578764
Q ss_pred -cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 223 -PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 223 -sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
+... ...+.+..|..|++..|-+.++|..+|..++..
T Consensus 81 ~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 81 VTGYASLENSVFSLNAGADAYIMKPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EeccccHHHHHHHHhccchhhccCCCCHHHHHHHHHHHHhc
Confidence 3333 344556778899999999999999999888753
No 109
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=68.97 E-value=52 Score=28.26 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=70.2
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G 217 (797)
.+ ++|+.+.+. ....+.....+.|. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .
T Consensus 7 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ 80 (132)
T 3lte_A 7 KR-ILVVDDDQA-MAAAIERVLKRDHW---QVEIAHNGFDAGIKLSTFEPAIMTLDLSMPK-LDGLDVIRSLRQNKVANQ 80 (132)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHTCCSEEEEESCBTT-BCHHHHHHHHHTTTCSSC
T ss_pred cc-EEEEECCHH-HHHHHHHHHHHCCc---EEEEeCCHHHHHHHHHhcCCCEEEEecCCCC-CCHHHHHHHHHhcCccCC
Confidence 45 466665543 24566666666555 46666666666555543 577777433331 457788888764 3
Q ss_pred CcEEEcCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITPDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIasd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.|||..... ...+.+..|..+++..|-++++|.++|........
T Consensus 81 ~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 127 (132)
T 3lte_A 81 PKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLDRIHDLVNEGH 127 (132)
T ss_dssp CEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHHHHHHHHC---
T ss_pred CeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHHHHHHHcCCCC
Confidence 455544332 34456677889999999999999999999876543
No 110
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=68.73 E-value=57 Score=28.69 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=66.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+.. ...+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .+|||.
T Consensus 7 ILivdd~~~~-~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~~ii~ 81 (137)
T 3cfy_A 7 VLLVEDSTSL-AILYKQYVKDEPY---DIFHVETGRDAIQFIERSKPQLIILDLKLPD-MSGEDVLDWINQNDIPTSVII 81 (137)
T ss_dssp EEEECSCTTH-HHHHHHHTTTSSS---EEEEESSHHHHHHHHHHHCCSEEEECSBCSS-SBHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEeCCHHH-HHHHHHHHHhcCc---eEEEeCCHHHHHHHHHhcCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEE
Confidence 4667665542 3445554444333 45555555555555543 688887433321 346677777753 567664
Q ss_pred c-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 P-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 s-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
- ... ...+.+..|..+++..|-+.++|..+|..++.
T Consensus 82 ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 121 (137)
T 3cfy_A 82 ATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHLK 121 (137)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHHHHHHHH
Confidence 3 333 24455667888999999999999999988874
No 111
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=68.69 E-value=43 Score=29.45 Aligned_cols=109 Identities=13% Similarity=0.131 Sum_probs=68.9
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCcE
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIPV 220 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~PV 220 (797)
.+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .+||
T Consensus 5 ~~-Ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~i 78 (136)
T 2qzj_A 5 TK-ILIIDGDKD-NCQKLKGFLEEKGI---SIDLAYNCEEAIGKIFSNKYDLIFLEIILSD-GDGWTLCKKIRNVTTCPI 78 (136)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHHHCCCSEEEEESEETT-EEHHHHHHHHHTTCCCCE
T ss_pred Ce-EEEEcCCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHHhcCCCEEEEeCCCCC-CCHHHHHHHHccCCCCCE
Confidence 45 466765543 23455555555444 46555655565555554 588876332221 346677777754 5787
Q ss_pred EEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Ias-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.- ... ...+.+..|..+++..|-++++|..+|..++..
T Consensus 79 i~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 79 VYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRR 121 (136)
T ss_dssp EEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHH
Confidence 753 333 245566778899999999999999999888753
No 112
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=68.55 E-value=52 Score=28.11 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=67.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCcEEEc
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIPVITP 223 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~PVIas 223 (797)
++++.+.+. ....+....++.|. .|.......+....+.. .|++++-....+ .-|..+++.+.. ++|||.-
T Consensus 5 ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlii~D~~~p~-~~g~~~~~~lr~~~~~~ii~~ 79 (120)
T 3f6p_A 5 ILVVDDEKP-IADILEFNLRKEGY---EVHCAHDGNEAVEMVEELQPDLILLDIMLPN-KDGVEVCREVRKKYDMPIIML 79 (120)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHTTCCSEEEEETTSTT-THHHHHHHHHHTTCCSCEEEE
T ss_pred EEEEECCHH-HHHHHHHHHHhCCE---EEEEeCCHHHHHHHHhhCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCEEEE
Confidence 466665443 23555666666665 35555665565555544 577777433321 446667776643 5787753
Q ss_pred -CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 224 -DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 224 -d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
... ...+.+..|..+|+..|-++++|..++..++.
T Consensus 80 t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 80 TAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLR 118 (120)
T ss_dssp EESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred ECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHh
Confidence 222 23445677889999999999999999988875
No 113
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=67.16 E-value=54 Score=29.12 Aligned_cols=110 Identities=13% Similarity=0.087 Sum_probs=67.3
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH------
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT------ 215 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA------ 215 (797)
..+ ++|+.+.+. ....+....++.|. .|......++....+.. .|++++=-...+ .-|..+++.+.
T Consensus 14 ~~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~-~~g~~~~~~lr~~~~~~ 87 (143)
T 3m6m_D 14 SMR-MLVADDHEA-NRMVLQRLLEKAGH---KVLCVNGAEQVLDAMAEEDYDAVIVDLHMPG-MNGLDMLKQLRVMQASG 87 (143)
T ss_dssp -CE-EEEECSSHH-HHHHHHHHHHC--C---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHHHHHTT
T ss_pred cce-EEEEeCCHH-HHHHHHHHHHHcCC---eEEEeCCHHHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHhchhcc
Confidence 456 466765543 23455666665554 45556665666666554 678887433321 44677787774
Q ss_pred -hCCcEEEcCCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 216 -FGIPVITPDFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 216 -~G~PVIasd~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
..+|||..... ...+....|..+|+..|-+.++|.++|..+...
T Consensus 88 ~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 88 MRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC--
T ss_pred CCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHHHHHHHHHHh
Confidence 13687754332 234455678889999999999999999988643
No 114
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=66.66 E-value=58 Score=27.50 Aligned_cols=106 Identities=11% Similarity=0.067 Sum_probs=66.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCcEEE-
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIPVIT- 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~PVIa- 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .+|||.
T Consensus 5 ilivdd~~~-~~~~l~~~L~~~~~---~v~~~~~~~~~~~~~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~ii~~ 79 (122)
T 1zgz_A 5 IVIVEDEPV-TQARLQSYFTQEGY---TVSVTASGAGLREIMQNQSVDLILLDINLPD-ENGLMLTRALRERSTVGIILV 79 (122)
T ss_dssp EEEECSSHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCHH-HHHHHHHHHHHCCC---eEEEecCHHHHHHHHhcCCCCEEEEeCCCCC-CChHHHHHHHHhcCCCCEEEE
Confidence 456665443 23555666665554 46555665666666554 588877433321 346777777753 567664
Q ss_pred cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.... ..+.+..|..+++..|-++++|..+|..++.
T Consensus 80 s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 118 (122)
T 1zgz_A 80 TGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLW 118 (122)
T ss_dssp ESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCCChhhHHHHHHhCHHHHccCCCCHHHHHHHHHHHHH
Confidence 33332 3445667888999999999999999988764
No 115
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=66.11 E-value=31 Score=29.61 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=69.3
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G 217 (797)
.+ ++++.+.+. ....+.......|.. .|.......+....+.. .|++++-....+ .-|..+++.+.. .
T Consensus 7 ~~-ilivdd~~~-~~~~l~~~L~~~g~~--~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ 81 (129)
T 1p6q_A 7 IK-VLIVDDQVT-SRLLLGDALQQLGFK--QITAAGDGEQGMKIMAQNPHHLVISDFNMPK-MDGLGLLQAVRANPATKK 81 (129)
T ss_dssp CC-EEEECSSHH-HHHHHHHHHHTTTCS--CEECCSSHHHHHHHHHTSCCSEEEECSSSCS-SCHHHHHHHHTTCTTSTT
T ss_pred Ce-EEEEcCCHH-HHHHHHHHHHHCCCc--EEEecCCHHHHHHHHHcCCCCEEEEeCCCCC-CCHHHHHHHHhcCccccC
Confidence 45 466665543 234556666655653 36656665666566554 578877433321 346777887753 5
Q ss_pred CcEEEcC-CCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 218 IPVITPD-FPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 218 ~PVIasd-~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+|||... .+. ..+.+..|..+++..|-++++|..+|..++.
T Consensus 82 ~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (129)
T 1p6q_A 82 AAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp CEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 6777543 332 3345667888999999999999999988765
No 116
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=66.11 E-value=90 Score=29.45 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=69.0
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEE-EecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~-flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~P 219 (797)
.+ ++|+.+.+. ....+.......|.. |. ......+....+.. .|++|+-....+ .-|..+++.+.. ..|
T Consensus 14 ~~-iLivdd~~~-~~~~l~~~L~~~g~~---v~~~~~~~~~al~~~~~~~~dlvi~D~~~p~-~~g~~~~~~l~~~~~~p 87 (205)
T 1s8n_A 14 RR-VLIAEDEAL-IRMDLAEMLREEGYE---IVGEAGDGQEAVELAELHKPDLVIMDVKMPR-RDGIDAASEIASKRIAP 87 (205)
T ss_dssp CE-EEEECSSHH-HHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHHHCCSEEEEESSCSS-SCHHHHHHHHHHTTCSC
T ss_pred cc-EEEEECCHH-HHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHhhcCCCEEEEeCCCCC-CChHHHHHHHHhcCCCC
Confidence 46 466765543 235566666665653 44 45555555555543 688887433321 346777777754 347
Q ss_pred EEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 220 VITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 220 VIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
||.- ... ...+.+..|..+++..|-++++|..+|..++...
T Consensus 88 ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~~ 132 (205)
T 1s8n_A 88 IVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF 132 (205)
T ss_dssp EEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 6643 322 2344566788899999999999999999988644
No 117
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=65.80 E-value=65 Score=27.72 Aligned_cols=109 Identities=10% Similarity=0.000 Sum_probs=69.4
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEE-EecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHh---CCcEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTF---GIPVI 221 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~-flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVI 221 (797)
++++.+.+. ....+.....+.|.. +. .....++....+. ..|++++-....+ .-|..+++.+.. .+|||
T Consensus 4 ilivdd~~~-~~~~l~~~L~~~g~~---v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii 78 (134)
T 3f6c_A 4 AIIIDDHPL-AIAAIRNLLIKNDIE---ILAELTEGGSAVQRVETLKPDIVIIDVDIPG-VNGIQVLETLRKRQYSGIII 78 (134)
T ss_dssp EEEECCCHH-HHHHHHHHHHHTTEE---EEEEESSSTTHHHHHHHHCCSEEEEETTCSS-SCHHHHHHHHHHTTCCSEEE
T ss_pred EEEEcCCHH-HHHHHHHHHhhCCcE---EEEEcCCHHHHHHHHHhcCCCEEEEecCCCC-CChHHHHHHHHhcCCCCeEE
Confidence 456665443 245666666766642 33 4444445544443 3677777443331 456777777664 46666
Q ss_pred E-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 222 T-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 222 a-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
. +... ...+.+..|..+++..|-++++|.++|..+++...
T Consensus 79 ~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~~ 122 (134)
T 3f6c_A 79 IVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYC 122 (134)
T ss_dssp EEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHTTCC
T ss_pred EEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHCCCE
Confidence 4 3222 45667778889999999999999999999987544
No 118
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=64.39 E-value=35 Score=29.96 Aligned_cols=110 Identities=15% Similarity=0.039 Sum_probs=69.4
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~P 219 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+-. ..+ .-|..+++.+.. .+|
T Consensus 5 ~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~d~-~~~-~~g~~~~~~l~~~~~~~p 77 (142)
T 2qxy_A 5 PT-VMVVDESRI-TFLAVKNALEKDGF---NVIWAKNEQEAFTFLRREKIDLVFVDV-FEG-EESLNLIRRIREEFPDTK 77 (142)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHGGGTC---EEEEESSHHHHHHHHTTSCCSEEEEEC-TTT-HHHHHHHHHHHHHCTTCE
T ss_pred Ce-EEEEeCCHH-HHHHHHHHHHhCCC---EEEEECCHHHHHHHHhccCCCEEEEeC-CCC-CcHHHHHHHHHHHCCCCC
Confidence 45 456665443 23555666666565 46666666666666654 57887754 331 245556666543 578
Q ss_pred EEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 220 VITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 220 VIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
||.- .... ..+.+..|..+++..+-+.++|..+|..++....
T Consensus 78 ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 123 (142)
T 2qxy_A 78 VAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKKIISSTP 123 (142)
T ss_dssp EEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHHHHHC--
T ss_pred EEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHHHHhhcc
Confidence 7753 3332 4455667888999999999999999999987654
No 119
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=64.02 E-value=40 Score=29.52 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=63.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----hCCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-----FGIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-----~G~PV 220 (797)
++|+.+.+. ....+....... - .|.......+....+.. .|++|+-....+ .-|..+++.+. ..+||
T Consensus 6 iLivdd~~~-~~~~l~~~l~~~---~-~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~i 79 (140)
T 3n53_A 6 ILIIDQQDF-SRIELKNFLDSE---Y-LVIESKNEKEALEQIDHHHPDLVILDMDIIG-ENSPNLCLKLKRSKGLKNVPL 79 (140)
T ss_dssp EEEECSCHH-HHHHHHHHHTTT---S-EEEEESSHHHHHHHHHHHCCSEEEEETTC-------CHHHHHHTSTTCTTCCE
T ss_pred EEEEeCCHH-HHHHHHHHHHhc---c-eEEEeCCHHHHHHHHhcCCCCEEEEeCCCCC-CcHHHHHHHHHcCcccCCCCE
Confidence 466665432 124444444433 2 56666666665555543 578777433321 34566677766 46787
Q ss_pred EEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 221 ITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 221 Ias-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|.. ... ...+.+..|..+++..|-++++|..+|..++...
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 123 (140)
T 3n53_A 80 ILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRIEIHLRTQ 123 (140)
T ss_dssp EEEECC----CTTTTTTCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHHHHHHHhhH
Confidence 753 222 3455566788899999999999999999998644
No 120
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=63.27 E-value=62 Score=28.11 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=66.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+. ....+.......+.-. .|.......+....+.. .|++++--...+ .-|..+++.+.. .+|||.
T Consensus 6 Ilivdd~~~-~~~~l~~~l~~~~~~~-~v~~~~~~~~al~~~~~~~~dlvilD~~lp~-~~g~~~~~~l~~~~~~~~ii~ 82 (133)
T 3b2n_A 6 LIIAEDQNM-LRQAMVQLIKLHGDFE-ILADTDNGLDAMKLIEEYNPNVVILDIEMPG-MTGLEVLAEIRKKHLNIKVII 82 (133)
T ss_dssp EEEECSCHH-HHHHHHHHHHHHSSEE-EEEEESCHHHHHHHHHHHCCSEEEECSSCSS-SCHHHHHHHHHHTTCSCEEEE
T ss_pred EEEECCCHH-HHHHHHHHHhhCCCcE-EEEEcCCHHHHHHHHhhcCCCEEEEecCCCC-CCHHHHHHHHHHHCCCCcEEE
Confidence 456655433 2344555555444111 23444455555555543 688887433321 346777777754 577765
Q ss_pred -cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 223 -PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 223 -sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
+... ...+.+..|..+++..|.++++|..+|..++...
T Consensus 83 ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~~ 124 (133)
T 3b2n_A 83 VTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINKVNNGE 124 (133)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHC--
T ss_pred EecCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHcCC
Confidence 3333 3455666788999999999999999999988644
No 121
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=63.13 E-value=73 Score=27.35 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=66.9
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G 217 (797)
.+ ++|+.+.+.. ...+....+ .+. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .
T Consensus 5 ~~-ilivdd~~~~-~~~l~~~l~-~~~---~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ 77 (133)
T 3nhm_A 5 PK-VLIVENSWTM-RETLRLLLS-GEF---DCTTAADGASGLQQALAHPPDVLISDVNMDG-MDGYALCGHFRSEPTLKH 77 (133)
T ss_dssp CE-EEEECSCHHH-HHHHHHHHT-TTS---EEEEESSHHHHHHHHHHSCCSEEEECSSCSS-SCHHHHHHHHHHSTTTTT
T ss_pred CE-EEEEcCCHHH-HHHHHHHHh-CCc---EEEEECCHHHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHhCCccCC
Confidence 35 4666654321 233333333 222 56666666666665544 577777433331 456777877765 6
Q ss_pred CcEEEc-CCC--ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 218 IPVITP-DFP--IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 218 ~PVIas-d~g--Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+|||.- ... ...+.+..|..+++..|-++++|.++|..++....
T Consensus 78 ~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~ 124 (133)
T 3nhm_A 78 IPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQLHALLARAE 124 (133)
T ss_dssp CCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHHHHHHhhhc
Confidence 787753 222 23455667788999999999999999999987543
No 122
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=62.84 E-value=57 Score=27.87 Aligned_cols=110 Identities=9% Similarity=0.045 Sum_probs=69.5
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----C
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----G 217 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G 217 (797)
.+ ++|+.+.+. ....+.....+.|. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .
T Consensus 4 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~ 77 (127)
T 3i42_A 4 QQ-ALIVEDYQA-AAETFKELLEMLGF---QADYVMSGTDALHAMSTRGYDAVFIDLNLPD-TSGLALVKQLRALPMEKT 77 (127)
T ss_dssp EE-EEEECSCHH-HHHHHHHHHHHTTE---EEEEESSHHHHHHHHHHSCCSEEEEESBCSS-SBHHHHHHHHHHSCCSSC
T ss_pred ce-EEEEcCCHH-HHHHHHHHHHHcCC---CEEEECCHHHHHHHHHhcCCCEEEEeCCCCC-CCHHHHHHHHHhhhccCC
Confidence 35 466665543 24566777776665 36666666666666654 577777433321 456777887764 4
Q ss_pred CcEEEc-CCC--ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 218 IPVITP-DFP--IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 218 ~PVIas-d~g--Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
+|||.. ... .....+..|..+++..|-++++|.+++.......
T Consensus 78 ~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~~ 123 (127)
T 3i42_A 78 SKFVAVSGFAKNDLGKEACELFDFYLEKPIDIASLEPILQSIEGHH 123 (127)
T ss_dssp CEEEEEECC-CTTCCHHHHHHCSEEEESSCCHHHHHHHHHHHC---
T ss_pred CCEEEEECCcchhHHHHHHHhhHHheeCCCCHHHHHHHHHHhhccC
Confidence 777753 222 2245566677899999999999999999887644
No 123
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=62.76 E-value=68 Score=26.96 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=64.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++++.+.+. ....+.......|.. .+.......+....+.. .|++++--...+ .-|..+++.+. .++|||.
T Consensus 5 ilivdd~~~-~~~~l~~~l~~~g~~--vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 80 (120)
T 1tmy_A 5 VLIVDDAAF-MRMMLKDIITKAGYE--VAGEATNGREAVEKYKELKPDIVTMDITMPE-MNGIDAIKEIMKIDPNAKIIV 80 (120)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHCCSEEEEECSCGG-GCHHHHHHHHHHHCTTCCEEE
T ss_pred EEEEcCcHH-HHHHHHHHHhhcCcE--EEEEECCHHHHHHHHHhcCCCEEEEeCCCCC-CcHHHHHHHHHhhCCCCeEEE
Confidence 456665433 234555656655553 24445555555454443 688876332221 34566777664 3678765
Q ss_pred c-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 223 P-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 223 s-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
- .... ..+.+..|..+++..|-++++|.+++..++
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 119 (120)
T 1tmy_A 81 CSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKVS 119 (120)
T ss_dssp EECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred EeCCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHh
Confidence 3 3332 345566788899999999999999998764
No 124
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=62.27 E-value=34 Score=28.30 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=66.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----hCCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-----FGIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-----~G~PV 220 (797)
++++.+.+. ....+.......|. .|......++....+.. .|++++-....+ .-|..+++.+. ..+||
T Consensus 4 iliv~~~~~-~~~~l~~~l~~~g~---~v~~~~~~~~~~~~l~~~~~dlii~d~~~~~-~~~~~~~~~l~~~~~~~~~~i 78 (119)
T 2j48_A 4 ILLLEEEDE-AATVVCEMLTAAGF---KVIWLVDGSTALDQLDLLQPIVILMAWPPPD-QSCLLLLQHLREHQADPHPPL 78 (119)
T ss_dssp EEEECCCHH-HHHHHHHHHHHTTC---EEEEESCHHHHHHHHHHHCCSEEEEECSTTC-CTHHHHHHHHHHTCCCSSCCC
T ss_pred EEEEeCCHH-HHHHHHHHHHhCCc---EEEEecCHHHHHHHHHhcCCCEEEEecCCCC-CCHHHHHHHHHhccccCCCCE
Confidence 456665543 23556666666665 46666665565555544 578777433321 44677788876 45776
Q ss_pred EE-cCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 221 IT-PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 221 Ia-sd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
|. ++.....+....|..+++..|-+.++|..++..++.
T Consensus 79 i~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 117 (119)
T 2j48_A 79 VLFLGEPPVDPLLTAQASAILSKPLDPQLLLTTLQGLCP 117 (119)
T ss_dssp EEEESSCCSSHHHHHHCSEECSSCSTTHHHHHHHHTTCC
T ss_pred EEEeCCCCchhhhhcCHHHhccCCCCHHHHHHHHHHHhc
Confidence 64 332221166777778999999999999999887654
No 125
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=62.09 E-value=72 Score=26.96 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=65.3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH--hCCcEEEc
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT--FGIPVITP 223 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA--~G~PVIas 223 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+. ..+|+|..
T Consensus 6 ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~ 80 (123)
T 1xhf_A 6 ILIVEDELV-TRNTLKSIFEAEGY---DVFEATDGAEMHQILSEYDINLVIMDINLPG-KNGLLLARELREQANVALMFL 80 (123)
T ss_dssp EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHHHSCCSEEEECSSCSS-SCHHHHHHHHHHHCCCEEEEE
T ss_pred EEEEeCCHH-HHHHHHHHHhhCCc---EEEEeCCHHHHHHHHhcCCCCEEEEcCCCCC-CCHHHHHHHHHhCCCCcEEEE
Confidence 466665543 13455555554444 35555555565555554 588887433321 34566677664 46777643
Q ss_pred -CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 224 -DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 224 -d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
.... ..+.+..|..+++..|-++++|..++..++.
T Consensus 81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 119 (123)
T 1xhf_A 81 TGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 119 (123)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHH
Confidence 3332 3445667888999999999999999988764
No 126
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=62.08 E-value=86 Score=30.83 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=71.6
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
+..+ ++|+.+.+. ....+....+..|. .|.......+....+.. .|++|+=-...+ .-|..+++.+.. .
T Consensus 22 ~~~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~ 95 (250)
T 3r0j_A 22 PEAR-VLVVDDEAN-IVELLSVSLKFQGF---EVYTATNGAQALDRARETRPDAVILDVXMPG-MDGFGVLRRLRADGID 95 (250)
T ss_dssp SSCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHHCCSEEEEESCCSS-SCHHHHHHHHHHTTCC
T ss_pred CCce-EEEEECCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCC
Confidence 4567 467765543 24566666666665 36666666665555543 688887433321 456777877754 5
Q ss_pred CcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 218 IPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+|||.- ... ...+.+..|..+|+..|-++++|..+|..++.
T Consensus 96 ~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 96 APALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILR 140 (250)
T ss_dssp CCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 787753 333 23445667889999999999999999988875
No 127
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=62.01 E-value=89 Score=30.40 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=70.7
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCcE
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIPV 220 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~PV 220 (797)
.+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++|+--...+ .-|..+++.+.. ++||
T Consensus 6 ~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~dlvilD~~l~~-~~g~~~~~~lr~~~~~~i 79 (238)
T 2gwr_A 6 QR-ILVVDDDAS-LAEMLTIVLRGEGF---DTAVIGDGTQALTAVRELRPDLVLLDLMLPG-MNGIDVCRVLRADSGVPI 79 (238)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEECCGGGHHHHHHHHCCSEEEEESSCSS-SCHHHHHHHHHTTCCCCE
T ss_pred Ce-EEEEeCCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhCCCCcE
Confidence 35 466665543 23556666665555 35566655565555543 588887433321 346777777754 6887
Q ss_pred EEc-C---CCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITP-D---FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Ias-d---~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.- . .....+.+..|..|++..|-++++|..+|..++..
T Consensus 80 i~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 122 (238)
T 2gwr_A 80 VMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 122 (238)
T ss_dssp EEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHHHHHHHHCCC
T ss_pred EEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 753 2 22466777889999999999999999999887654
No 128
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=61.06 E-value=72 Score=26.65 Aligned_cols=107 Identities=9% Similarity=0.037 Sum_probs=65.1
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHH--hCCcEEEc
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMT--FGIPVITP 223 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA--~G~PVIas 223 (797)
++++.+.+. ....+.......|. .|.......+....+. ..|++++-....+ .-|..+++.+. ..+|||..
T Consensus 4 ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~ii~~ 78 (120)
T 2a9o_A 4 ILIVDDEKP-ISDIIKFNMTKEGY---EVVTAFNGREALEQFEAEQPDIIILDLMLPE-IDGLEVAKTIRKTSSVPILML 78 (120)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHHCCSEEEECSSCSS-SCHHHHHHHHHHHCCCCEEEE
T ss_pred EEEEcCCHH-HHHHHHHHHHhcCc---EEEEecCHHHHHHHHHhCCCCEEEEeccCCC-CCHHHHHHHHHhCCCCCEEEE
Confidence 456665443 23455555565554 3555555555444444 3688877433321 34566666664 46787753
Q ss_pred -CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 224 -DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 224 -d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
.... ....+..|..+++..|-+.++|..++..++..
T Consensus 79 s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 118 (120)
T 2a9o_A 79 SAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRR 118 (120)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHC
T ss_pred ecCCchHHHHHHHhCCHhheEeCCCCHHHHHHHHHHHHcc
Confidence 3332 33455678889999999999999999888753
No 129
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=60.80 E-value=1e+02 Score=29.53 Aligned_cols=108 Identities=13% Similarity=0.026 Sum_probs=68.8
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCC
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGI 218 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~ 218 (797)
..+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+--...+ .-|..+++.+. ..+
T Consensus 7 ~~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~~~~~~~dlvllD~~l~~-~~g~~~~~~l~~~~~~~ 80 (233)
T 1ys7_A 7 SPR-VLVVDDDSD-VLASLERGLRLSGF---EVATAVDGAEALRSATENRPDAIVLDINMPV-LDGVSVVTALRAMDNDV 80 (233)
T ss_dssp CCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEEESSCSS-SCHHHHHHHHHHTTCCC
T ss_pred CCe-EEEEeCCHH-HHHHHHHHHHhCCC---EEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCC
Confidence 346 466665543 23556666666554 46555555565555554 588887433321 34677777775 368
Q ss_pred cEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 219 PVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 219 PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
|||.- ... ...+.+..|..|++..|.++++|..+|..++
T Consensus 81 ~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~ 123 (233)
T 1ys7_A 81 PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALL 123 (233)
T ss_dssp CEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 87753 222 3455667788899999999999999987765
No 130
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=60.58 E-value=46 Score=29.73 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=68.0
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHH-cCCCCCeEE-EecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASR-LGLLEHSVR-HYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~e-lgL~d~~V~-flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
..+ ++++.+.+. ....+...... .|. .+. ......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 5 ~~~-ILivdd~~~-~~~~l~~~L~~~~~~---~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~-~~g~~~~~~l~~~~~ 78 (153)
T 3cz5_A 5 TAR-IMLVDDHPI-VREGYRRLIERRPGY---AVVAEAADAGEAYRLYRETTPDIVVMDLTLPG-PGGIEATRHIRQWDG 78 (153)
T ss_dssp CEE-EEEECSCHH-HHHHHHHHHTTSTTE---EEEEEESSHHHHHHHHHTTCCSEEEECSCCSS-SCHHHHHHHHHHHCT
T ss_pred ccE-EEEECCcHH-HHHHHHHHHhhCCCc---EEEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CCHHHHHHHHHHhCC
Confidence 356 466665432 12344444433 222 233 44455566666554 578887433321 346667777654
Q ss_pred CCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 217 GIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 217 G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
.+|||.. ... ...+.+..|..+++..+-+.++|..+|..++....
T Consensus 79 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~~ 127 (153)
T 3cz5_A 79 AARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIEAILAGRR 127 (153)
T ss_dssp TCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHHHHHHTTTCC
T ss_pred CCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHhCCc
Confidence 6787753 333 34455667888999999999999999999987654
No 131
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=59.07 E-value=71 Score=27.10 Aligned_cols=106 Identities=17% Similarity=0.157 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++--...+ .-|..+++.+. ..+|||.
T Consensus 6 ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 80 (124)
T 1srr_A 6 ILIVDDQSG-IRILLNEVFNKEGY---QTFQAANGLQALDIVTKERPDLVLLDMKIPG-MDGIEILKRMKVIDENIRVII 80 (124)
T ss_dssp EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHHHHCCSEEEEESCCTT-CCHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCc---EEEEeCCHHHHHHHHhccCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCCEEE
Confidence 466665543 23455555555444 35555555555554443 688887433321 34566677665 3678765
Q ss_pred -cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 -PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 -sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.... ..+.+..|..+++..|-++++|..++..++.
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (124)
T 1srr_A 81 MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLP 120 (124)
T ss_dssp EESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHHHHSC
T ss_pred EEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHHHHhc
Confidence 33332 3445566888999999999999999988864
No 132
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=58.49 E-value=83 Score=29.64 Aligned_cols=110 Identities=13% Similarity=0.125 Sum_probs=69.2
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCc
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIP 219 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~P 219 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+=-...+ .-|..+++.+.. ++|
T Consensus 5 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~-~~g~~~~~~l~~~~~~~~ 78 (208)
T 1yio_A 5 PT-VFVVDDDMS-VREGLRNLLRSAGF---EVETFDCASTFLEHRRPEQHGCLVLDMRMPG-MSGIELQEQLTAISDGIP 78 (208)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHCCTTSCEEEEEESCCSS-SCHHHHHHHHHHTTCCCC
T ss_pred CE-EEEEcCCHH-HHHHHHHHHHhCCc---eEEEcCCHHHHHHhhhccCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCC
Confidence 35 466665543 23455555555454 35555555555554443 477776332221 456777777753 678
Q ss_pred EEEc-CC---CChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 220 VITP-DF---PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 220 VIas-d~---gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
||.- .. ....+.+..|..+++..|.++++|..+|..++...
T Consensus 79 ii~ls~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~~ 123 (208)
T 1yio_A 79 IVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQLN 123 (208)
T ss_dssp EEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHhhh
Confidence 7743 22 24667777888999999999999999999988643
No 133
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=57.44 E-value=83 Score=30.19 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=71.6
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---------------cCEEEEccCCCCCCcc
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---------------ADIVLYGSSQVEQGFP 207 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---------------ADV~V~PS~~Ee~GFP 207 (797)
...+ ++|+.+.+. ....+..+....|.. .|.......+..+++.. .|++|+=....+ .-|
T Consensus 60 ~~~~-ILiVdDd~~-~~~~l~~~L~~~g~~--~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~-~~G 134 (206)
T 3mm4_A 60 RGKR-VLVVDDNFI-SRKVATGKLKKMGVS--EVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPE-MDG 134 (206)
T ss_dssp TTCE-EEEECSCHH-HHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSS-SCH
T ss_pred CCCE-EEEEeCCHH-HHHHHHHHHHHcCCC--eeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCC-CCH
Confidence 3456 467765543 245667777777764 47777776676666653 688887433321 457
Q ss_pred HHHHHHHH-------hCCcEEEc-CCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 003758 208 SLIVRAMT-------FGIPVITP-DFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 262 (797)
Q Consensus 208 lvLLEAMA-------~G~PVIas-d~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpel 262 (797)
..+++.+. ..+|||.. ... ...+.+..|..+|+..|-+ +|.++|..++.....
T Consensus 135 ~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~--~L~~~i~~~l~~~~~ 199 (206)
T 3mm4_A 135 YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN--QLANVIREIESKRHL 199 (206)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT--THHHHHHHHC-----
T ss_pred HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH--HHHHHHHHHHhhhHH
Confidence 77777775 45787753 332 2344566788899998877 899999998875543
No 134
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=54.91 E-value=39 Score=31.69 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=71.1
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CC
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GI 218 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~ 218 (797)
..+ ++|+.+.+. ....+.......|. .|.......+....+.. .|++++=-...+ .-|..+++.+.. .+
T Consensus 7 ~~~-iLivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~-~~g~~~~~~l~~~~~~~ 80 (184)
T 3rqi_A 7 DKN-FLVIDDNEV-FAGTLARGLERRGY---AVRQAHNKDEALKLAGAEKFEFITVXLHLGN-DSGLSLIAPLCDLQPDA 80 (184)
T ss_dssp CCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEECSHHHHHHHHTTSCCSEEEECSEETT-EESHHHHHHHHHHCTTC
T ss_pred CCe-EEEEcCCHH-HHHHHHHHHHHCCC---EEEEeCCHHHHHHHHhhCCCCEEEEeccCCC-ccHHHHHHHHHhcCCCC
Confidence 346 466765543 24566666666665 46666666666666654 578877332221 456777777654 67
Q ss_pred cEEE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 219 PVIT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 219 PVIa-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
|||. |.... ..+.+..|..+|+..|-++++|..+|..++.
T Consensus 81 ~ii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 81 RILVLTGYASIATAVQAVKDGADNYLAKPANVESILAALQTNAS 124 (184)
T ss_dssp EEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHTSTTHH
T ss_pred CEEEEeCCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHH
Confidence 8775 33332 4556677889999999999999999987764
No 135
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=53.97 E-value=68 Score=27.90 Aligned_cols=110 Identities=11% Similarity=-0.019 Sum_probs=68.1
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh--
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF-- 216 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~-- 216 (797)
.+..+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 13 ~~~~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~-~~g~~~~~~l~~~~ 86 (138)
T 2b4a_A 13 MQPFR-VTLVEDEPS-HATLIQYHLNQLGA---EVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVD-LSIFSLLDIVKEQT 86 (138)
T ss_dssp -CCCE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHTGGGGGSCSEEEEETTCTT-SCHHHHHHHHTTSS
T ss_pred CCCCe-EEEECCCHH-HHHHHHHHHHHcCC---EEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCC-CCHHHHHHHHHhhC
Confidence 35567 467765543 24566666666665 46666666666665544 688887443331 346777887764
Q ss_pred -CCcEEEc--CCCCh--hHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 217 -GIPVITP--DFPII--KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 217 -G~PVIas--d~gGi--~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
.+|||.- ..... .+.+ ..+++..+-+.++|..+|..++...
T Consensus 87 ~~~~ii~ls~~~~~~~~~~~~---~~~~l~KP~~~~~L~~~i~~~~~~~ 132 (138)
T 2b4a_A 87 KQPSVLILTTGRHELIESSEH---NLSYLQKPFAISELRAAIDYHKPSM 132 (138)
T ss_dssp SCCEEEEEESCC--CCCCSSS---CEEEEESSCCHHHHHHHHHHTCCC-
T ss_pred CCCCEEEEECCCCCHHHHHHH---HHheeeCCCCHHHHHHHHHHHHHhc
Confidence 5776643 32211 2222 6799999999999999999887654
No 136
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=53.20 E-value=1.1e+02 Score=26.29 Aligned_cols=109 Identities=9% Similarity=0.028 Sum_probs=69.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+.. .+|||.
T Consensus 6 ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 80 (136)
T 1mvo_A 6 ILVVDDEES-IVTLLQYNLERSGY---DVITASDGEEALKKAETEKPDLIVLDVMLPK-LDGIEVCKQLRQQKLMFPILM 80 (136)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHHCCSEEEEESSCSS-SCHHHHHHHHHHTTCCCCEEE
T ss_pred EEEEECCHH-HHHHHHHHHHHCCc---EEEEecCHHHHHHHHhhcCCCEEEEecCCCC-CCHHHHHHHHHcCCCCCCEEE
Confidence 466665543 23455565665554 35555555555555543 588887433321 346677777653 567764
Q ss_pred -cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 223 -PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 223 -sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
+... .....+..|..+++..|-++++|..++..++....
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~~ 123 (136)
T 1mvo_A 81 LTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRRSE 123 (136)
T ss_dssp EECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHTC-
T ss_pred EECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHHHHhhc
Confidence 3322 35566778889999999999999999999987654
No 137
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=52.80 E-value=1.7e+02 Score=29.14 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=71.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hC
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FG 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G 217 (797)
...+ ++++.+.+.. ...+....+..|. .|.......+....+.. .|++++=-...+ .-|..+++.+. ..
T Consensus 128 ~~~~-ILivdd~~~~-~~~l~~~L~~~g~---~v~~a~~~~eal~~l~~~~~dlvl~D~~mp~-~~G~~l~~~ir~~~~~ 201 (254)
T 2ayx_A 128 DDMM-ILVVDDHPIN-RRLLADQLGSLGY---QCKTANDGVDALNVLSKNHIDIVLSDVNMPN-MDGYRLTQRIRQLGLT 201 (254)
T ss_dssp CCCE-EEEEESSHHH-HHHHHHHHHHHTS---EEEEECCSHHHHHHHHHSCCSEEEEEESSCS-SCCHHHHHHHHHHHCC
T ss_pred CCCE-EEEEeCCHHH-HHHHHHHHHHcCC---EEEEECCHHHHHHHHHhCCCCEEEEcCCCCC-CCHHHHHHHHHhcCCC
Confidence 3467 4667665432 3556666777776 36666665566565654 577776322221 33566666654 47
Q ss_pred CcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 218 IPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+|||+- ... ...+.+..|.++++..|-+.++|.++|..++.
T Consensus 202 ~piI~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 246 (254)
T 2ayx_A 202 LPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAE 246 (254)
T ss_dssp SCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHcCCceEEECCCCHHHHHHHHHHHHH
Confidence 898853 332 34455677889999999999999999988874
No 138
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=52.11 E-value=1.2e+02 Score=28.78 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=65.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++|+--...+ .-|..+++.+.. .+|||.
T Consensus 5 ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~~~~~~~dlvllD~~l~~-~~g~~~~~~lr~~~~~~~ii~ 79 (225)
T 1kgs_A 5 VLVVEDERD-LADLITEALKKEMF---TVDVCYDGEEGMYMALNEPFDVVILDIMLPV-HDGWEILKSMRESGVNTPVLM 79 (225)
T ss_dssp EEEECSSHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHHTTCCCCEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCCEEE
Confidence 456665543 23555666665554 35555555555555543 578877433321 346677777753 678775
Q ss_pred cC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 PD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 sd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
-. .. ...+.+..|..|++..|-++++|..+|..++.
T Consensus 80 ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 119 (225)
T 1kgs_A 80 LTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIR 119 (225)
T ss_dssp EESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHHHHHh
Confidence 43 33 23444556788999999999999999877753
No 139
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=51.48 E-value=1e+02 Score=25.57 Aligned_cols=105 Identities=9% Similarity=0.083 Sum_probs=64.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-..... .-|..+++.+. ..+|||.
T Consensus 4 ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 78 (116)
T 3a10_A 4 ILVVDDEPN-IRELLKEELQEEGY---EIDTAENGEEALKKFFSGNYDLVILDIEMPG-ISGLEVAGEIRKKKKDAKIIL 78 (116)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEECSCCSS-SCHHHHHHHHHHHCTTCCEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCC---EEEEeCCHHHHHHHHhcCCCCEEEEECCCCC-CCHHHHHHHHHccCCCCeEEE
Confidence 456665543 23555666666554 46666665565555554 577776333221 34666777664 3577764
Q ss_pred -cCCC-ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 223 -PDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 223 -sd~g-Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
+... ...+....|..+++..|.++++|..++..++
T Consensus 79 ~s~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 115 (116)
T 3a10_A 79 LTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVKKLL 115 (116)
T ss_dssp EESCGGGGGCGGGGGSSEEEECCSSTHHHHHHHHHHT
T ss_pred EECCcchHHHHHhccccceEECCCCHHHHHHHHHHHh
Confidence 3332 2234455677899999999999999998764
No 140
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=50.23 E-value=1.1e+02 Score=25.53 Aligned_cols=106 Identities=12% Similarity=0.086 Sum_probs=66.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++--...+ .-|..+++.+.. .+|||.
T Consensus 3 ilivdd~~~-~~~~l~~~l~~~g~---~v~~~~~~~~a~~~~~~~~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ 77 (121)
T 2pl1_A 3 VLVVEDNAL-LRHHLKVQIQDAGH---QVDDAEDAKEADYYLNEHIPDIAIVDLGLPD-EDGLSLIRRWRSNDVSLPILV 77 (121)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEECSCCSS-SCHHHHHHHHHHTTCCSCEEE
T ss_pred EEEEeCcHH-HHHHHHHHHhhcCC---EEEEeCCHHHHHHHHhccCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEE
Confidence 355554432 23455565665554 46555555565555554 578876332221 346777877763 567764
Q ss_pred -cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 -PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 -sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.... ..+.+..|..+++..|-++++|..++..++.
T Consensus 78 ~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 117 (121)
T 2pl1_A 78 LTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMR 117 (121)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCccceEECCCCHHHHHHHHHHHHH
Confidence 33332 3455667888999999999999999988764
No 141
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=49.61 E-value=58 Score=27.66 Aligned_cols=107 Identities=12% Similarity=0.080 Sum_probs=64.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-----hCCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-----FGIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-----~G~PV 220 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++++-....+ .-|..+++.+. .++||
T Consensus 5 ilivdd~~~-~~~~l~~~l~~~g~---~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~i 79 (127)
T 2jba_A 5 ILVVEDEAP-IREMVCFVLEQNGF---QPVEAEDYDSAVNQLNEPWPDLILLAWMLPG-GSGIQFIKHLRRESMTRDIPV 79 (127)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEECSHHHHHTTCSSSCCSEEEEESEETT-EEHHHHHHHHHTSTTTTTSCE
T ss_pred EEEEcCCHH-HHHHHHHHHHHCCc---eEEEeCCHHHHHHHHhccCCCEEEEecCCCC-CCHHHHHHHHHhCcccCCCCE
Confidence 456665543 23455555665555 35555544444444432 577776332221 34677788776 35787
Q ss_pred EEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Ias-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.- ... ...+.+..|..+++..|-++++|..++..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 122 (127)
T 2jba_A 80 VMLTARGEEEDRVRGLETGADDCITKPFSPKELVARIKAVMRR 122 (127)
T ss_dssp EEEEETTHHHHHHTTCCCSCSEEEEESCCHHHHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHhc
Confidence 754 332 233445567789999999999999999988764
No 142
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=48.21 E-value=1.5e+02 Score=27.61 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=65.4
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec-ChhhHHHHHHHcCEEEEccCCCCCCc-cHHHHHHHH---hCC
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-FNGDVNGVLLMADIVLYGSSQVEQGF-PSLIVRAMT---FGI 218 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG-~~edl~~~L~aADV~V~PS~~Ee~GF-PlvLLEAMA---~G~ 218 (797)
..+ ++|+.+.+.. ...+.......|.. |.... ..+-+ -...|++++--... +. |. +.+.+. ..+
T Consensus 12 ~~~-iLivdd~~~~-~~~l~~~L~~~g~~---v~~~~~~~~al---~~~~dlvl~D~~mp--~~~g~-l~~~~~~~~~~~ 80 (196)
T 1qo0_D 12 ELQ-VLVLNPPGEV-SDALVLQLIRIGCS---VRQCWPPPEAF---DVPVDVVFTSIFQN--RHHDE-IAALLAAGTPRT 80 (196)
T ss_dssp GCE-EEEESCTTHH-HHHHHHHHHHHTCE---EEEECSCCSSC---SSCCSEEEEECCSS--THHHH-HHHHHHHSCTTC
T ss_pred CCe-EEEEcCChhH-HHHHHHHHHHcCCe---EEEecCchhhC---CCCCCEEEEeCCCC--ccchH-HHHHHhccCCCC
Confidence 356 5677766542 35566666666664 33333 22212 12568888744333 32 44 666665 457
Q ss_pred cEEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 219 PVIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 219 PVIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|||. +... ...+.+..|..+|+..|-++++|..+|..++...
T Consensus 81 ~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~~~ 126 (196)
T 1qo0_D 81 TLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRIS 126 (196)
T ss_dssp EEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHHH
T ss_pred CEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHHHH
Confidence 8775 3333 2445566788999999999999999999887644
No 143
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=48.03 E-value=41 Score=35.28 Aligned_cols=69 Identities=16% Similarity=0.187 Sum_probs=46.0
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++. .+. +..++.+++++.+. + . .++.++++. .|+++..+... .-.-.+++|+..|++|
T Consensus 47 ~~~~lvav~d--~~~--~~a~~~a~~~g~~~--~--y---~d~~ell~~~~iDaV~I~tP~~--~H~~~~~~al~aGkhV 113 (350)
T 4had_A 47 ENCVVTAIAS--RDL--TRAREMADRFSVPH--A--F---GSYEEMLASDVIDAVYIPLPTS--QHIEWSIKAADAGKHV 113 (350)
T ss_dssp SSEEEEEEEC--SSH--HHHHHHHHHHTCSE--E--E---SSHHHHHHCSSCSEEEECSCGG--GHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEEC--CCH--HHHHHHHHHcCCCe--e--e---CCHHHHhcCCCCCEEEEeCCCc--hhHHHHHHHHhcCCEE
Confidence 6778433443 222 77788888888753 2 2 356677765 68888866443 3345678999999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++=.
T Consensus 114 l~EK 117 (350)
T 4had_A 114 VCEK 117 (350)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9754
No 144
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=47.45 E-value=1e+02 Score=27.15 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=48.6
Q ss_pred EecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHH
Q 003758 178 HYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEG 248 (797)
Q Consensus 178 flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~ee 248 (797)
......+....+.. .|++++-....+ .-|..+++.+. .++|||.- ... ...+.+..|..+++..|-++++
T Consensus 34 ~~~~~~~al~~~~~~~~dlvllD~~lp~-~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 112 (141)
T 3cu5_A 34 QADDGINAIQIALKHPPNVLLTDVRMPR-MDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSE 112 (141)
T ss_dssp EESSHHHHHHHHTTSCCSEEEEESCCSS-SCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHH
T ss_pred ecccHHHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHH
Confidence 44455555555543 588887433321 34667777765 36787753 222 3455667788899999999999
Q ss_pred HHHHHHHHHh
Q 003758 249 LSRAFSLFIS 258 (797)
Q Consensus 249 LAeaI~~LLe 258 (797)
|.++|..++.
T Consensus 113 L~~~i~~~~~ 122 (141)
T 3cu5_A 113 IMDALKQSIQ 122 (141)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988874
No 145
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=46.87 E-value=74 Score=33.64 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=45.1
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++.++. .+. +..++.+++++++. .+.... ++.+++. ..|+++..+... ...-.+.+|+..|++|
T Consensus 29 ~~~~lv~v~d--~~~--~~~~~~a~~~~~~~-~~~~~~---~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~aGk~V 98 (362)
T 1ydw_A 29 PNATISGVAS--RSL--EKAKAFATANNYPE-STKIHG---SYESLLEDPEIDALYVPLPTS--LHVEWAIKAAEKGKHI 98 (362)
T ss_dssp TTEEEEEEEC--SSH--HHHHHHHHHTTCCT-TCEEES---SHHHHHHCTTCCEEEECCCGG--GHHHHHHHHHTTTCEE
T ss_pred CCcEEEEEEc--CCH--HHHHHHHHHhCCCC-CCeeeC---CHHHHhcCCCCCEEEEcCChH--HHHHHHHHHHHCCCeE
Confidence 5567433333 222 66777788877642 233333 5666776 489999866544 3445677899999999
Q ss_pred EEc
Q 003758 221 ITP 223 (797)
Q Consensus 221 Ias 223 (797)
++-
T Consensus 99 ~~E 101 (362)
T 1ydw_A 99 LLE 101 (362)
T ss_dssp EEC
T ss_pred EEe
Confidence 974
No 146
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=46.79 E-value=67 Score=30.76 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=65.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---CCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---GIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G~PVIa 222 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++|+|. .-|..+++.+.. .+|||.
T Consensus 3 ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~dlvilp~-----~~g~~~~~~lr~~~~~~~ii~ 73 (223)
T 2hqr_A 3 VLLIEKNSV-LGGEIEKGLNVKGF---MADVTESLEDGEYLMDIRNYDLVMVSD-----KNALSFVSRIKEKHSSIVVLV 73 (223)
T ss_dssp EEEECSCHH-HHHHHHHHHGGGTC---CEEEESSHHHHHHHHTTSCCSEEEECC-----TTHHHHHHHHHHHCTTSEEEE
T ss_pred EEEEcCCHH-HHHHHHHHHHHCCc---EEEEECCHHHHHHHHhcCCCCEEEeCC-----CCHHHHHHHHHhCCCCCcEEE
Confidence 355554432 23455555555555 35555665566565554 58888432 335666776653 788775
Q ss_pred c-CCC---ChhHhhhcCCeEEEEcCC-CHHHHHHHHHHHHhC
Q 003758 223 P-DFP---IIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFISN 259 (797)
Q Consensus 223 s-d~g---Gi~EiI~Dg~nG~Lfd~~-D~eeLAeaI~~LLed 259 (797)
- ... ...+.+..|..|++..|. ++++|..+|..++..
T Consensus 74 lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~~i~~~~~~ 115 (223)
T 2hqr_A 74 SSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 115 (223)
T ss_dssp EESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHHHHHHHTSS
T ss_pred EECCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHhcc
Confidence 3 333 244556678889999999 999999999888754
No 147
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=46.50 E-value=1e+02 Score=26.40 Aligned_cols=109 Identities=17% Similarity=0.114 Sum_probs=63.8
Q ss_pred EEEEeCCCCCCHHHHHHHHHHc-CCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh----CCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF----GIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~el-gL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~----G~PV 220 (797)
++++.+.+. ....+....... +.. .+.......+....+.. .|++++--...+ .-|..+++.+.. ..||
T Consensus 5 ilivdd~~~-~~~~l~~~l~~~~~~~--~~~~~~~~~~a~~~~~~~~~dlvllD~~l~~-~~g~~~~~~l~~~~~~~~~i 80 (130)
T 1dz3_A 5 VCIADDNRE-LVSLLDEYISSQPDME--VIGTAYNGQDCLQMLEEKRPDILLLDIIMPH-LDGLAVLERIRAGFEHQPNV 80 (130)
T ss_dssp EEEECSCHH-HHHHHHHHHHTSTTEE--EEEEESSHHHHHHHHHHHCCSEEEEESCCSS-SCHHHHHHHHHHHCSSCCEE
T ss_pred EEEEcCCHH-HHHHHHHHHHhCCCce--EEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCcE
Confidence 456665432 123444444433 221 12234455555555543 588887333221 346677777753 3566
Q ss_pred EE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 221 IT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 221 Ia-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|. +... ...+.+..|..+++..|-++++|.++|..++...
T Consensus 81 i~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~~~ 124 (130)
T 1dz3_A 81 IMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKT 124 (130)
T ss_dssp EEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHHCC
T ss_pred EEEecCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhcCC
Confidence 53 3333 3455667788999999999999999999988654
No 148
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=46.11 E-value=1.1e+02 Score=32.04 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=45.1
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
+++++ +.+-+ .+. +..++.+++.+... ...++.+++. .+|+++..+... .-.-.+.+|+..|++|
T Consensus 28 ~~~~l-~av~d-~~~--~~~~~~~~~~~~~~-------~~~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~v 94 (330)
T 3e9m_A 28 AQAEV-RGIAS-RRL--ENAQKMAKELAIPV-------AYGSYEELCKDETIDIIYIPTYNQ--GHYSAAKLALSQGKPV 94 (330)
T ss_dssp SSEEE-EEEBC-SSS--HHHHHHHHHTTCCC-------CBSSHHHHHHCTTCSEEEECCCGG--GHHHHHHHHHHTTCCE
T ss_pred CCcEE-EEEEe-CCH--HHHHHHHHHcCCCc-------eeCCHHHHhcCCCCCEEEEcCCCH--HHHHHHHHHHHCCCeE
Confidence 56663 32222 333 67777788776642 1246777787 789998866444 3445678899999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 95 l~EK 98 (330)
T 3e9m_A 95 LLEK 98 (330)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9754
No 149
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=44.71 E-value=1.6e+02 Score=25.62 Aligned_cols=110 Identities=9% Similarity=-0.042 Sum_probs=64.4
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh------
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF------ 216 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~------ 216 (797)
.+ ++++.+.+.. ...+.......+. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 11 ~~-iLivdd~~~~-~~~l~~~L~~~~~---~v~~~~~~~~al~~l~~~~~dlvllD~~lp~-~~g~~~~~~l~~~~~~~~ 84 (140)
T 3c97_A 11 LS-VLIAEDNDIC-RLVAAKALEKCTN---DITVVTNGLQALQAYQNRQFDVIIMDIQMPV-MDGLEAVSEIRNYERTHN 84 (140)
T ss_dssp CE-EEEECCCHHH-HHHHHHHHTTTCS---EEEEESSHHHHHHHHHHSCCSEEEECTTCCS-SCHHHHHHHHHHHHHHHT
T ss_pred ce-EEEEcCCHHH-HHHHHHHHHHcCC---ceEEECCHHHHHHHHhcCCCCEEEEeCCCCC-CcHHHHHHHHHhhhhhcC
Confidence 45 4666655421 2334444443332 46666666666565554 588887433321 346677777652
Q ss_pred --CCcEEEc-CCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 217 --GIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 217 --G~PVIas-d~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
.+|||.. ...........|..+++..|-++++|.++|..++...
T Consensus 85 ~~~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~~ 131 (140)
T 3c97_A 85 TKRASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDVVLTCHSEG 131 (140)
T ss_dssp CCCCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred CCceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHHHHHHhCCC
Confidence 4666643 3222222234566799999999999999999988644
No 150
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=43.90 E-value=42 Score=30.58 Aligned_cols=109 Identities=7% Similarity=-0.010 Sum_probs=67.4
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH-hCCcE
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT-FGIPV 220 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA-~G~PV 220 (797)
..+ ++|+-+.+.. ...+....++.|... +....+.++-.+++.. -|++++=-...+ .-|..+++.+. .++||
T Consensus 8 ~~r-ILiVdD~~~~-~~~l~~~L~~~G~~v--~~~a~~g~eAl~~~~~~~~DlvllDi~mP~-~~G~el~~~lr~~~ipv 82 (123)
T 2lpm_A 8 RLR-VLVVEDESMI-AMLIEDTLCELGHEV--AATASRMQEALDIARKGQFDIAIIDVNLDG-EPSYPVADILAERNVPF 82 (123)
T ss_dssp CCC-EEEESSSTTT-SHHHHHHHHHHCCCC--CBCSCCHHHHHHHHHHCCSSEEEECSSSSS-CCSHHHHHHHHHTCCSS
T ss_pred CCE-EEEEeCCHHH-HHHHHHHHHHCCCEE--EEEECCHHHHHHHHHhCCCCEEEEecCCCC-CCHHHHHHHHHcCCCCE
Confidence 456 4677665543 477888888888763 2233445555555554 578876222221 34677777764 57897
Q ss_pred EE-cCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHH
Q 003758 221 IT-PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 221 Ia-sd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LL 257 (797)
|. |..+.......-+..+|+..|-++++|.++|.+++
T Consensus 83 I~lTa~~~~~~~~~~g~~~yl~KP~~~~~L~~~l~~~~ 120 (123)
T 2lpm_A 83 IFATGYGSKGLDTRYSNIPLLTKPFLDSELEAVLVQIS 120 (123)
T ss_dssp CCBCTTCTTSCCSSSCSCSCBCSSSSHHHHHHHHSTTC
T ss_pred EEEecCccHHHHHhCCCCcEEECCCCHHHHHHHHHHHH
Confidence 74 33332222223456689999999999999987764
No 151
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=43.07 E-value=1.7e+02 Score=27.65 Aligned_cols=112 Identities=10% Similarity=0.044 Sum_probs=66.0
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeE-EEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSV-RHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V-~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
..+ ++++.+.+. ....+.......+ +-.+ .......+....+.. .|++|+=-...+ .-|..+++.+.. .
T Consensus 5 ~~~-ilivdd~~~-~~~~l~~~L~~~~--~~~vv~~~~~~~~al~~~~~~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~ 79 (215)
T 1a04_A 5 PAT-ILLIDDHPM-LRTGVKQLISMAP--DITVVGEASNGEQGIELAESLDPDLILLDLNMPG-MNGLETLDKLREKSLS 79 (215)
T ss_dssp CEE-EEEECSCHH-HHHHHHHHHTTCT--TEEEEEEESSHHHHHHHHHHHCCSEEEEETTSTT-SCHHHHHHHHHHSCCC
T ss_pred ceE-EEEECCCHH-HHHHHHHHHhcCC--CcEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCC-CcHHHHHHHHHHhCCC
Confidence 356 466665542 1233333333222 1022 334455555555543 588887433321 346777777754 4
Q ss_pred CcEEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 218 IPVIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 218 ~PVIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
+|||. +... ...+.+..|..|++..|-++++|..+|..++...
T Consensus 80 ~~ii~ls~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~~ 126 (215)
T 1a04_A 80 GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 126 (215)
T ss_dssp SEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHSC
T ss_pred CcEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHcCC
Confidence 67664 3333 2445566788999999999999999999998754
No 152
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=42.63 E-value=1.5e+02 Score=24.70 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=61.9
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHh--CCcEEE-
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTF--GIPVIT- 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~--G~PVIa- 222 (797)
++++.+.+. ....+.......|. .|.......+....+. ..|++++-....+ .-|..+++.+.. .+|+|.
T Consensus 4 ilivdd~~~-~~~~l~~~l~~~~~---~v~~~~~~~~~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~ 78 (121)
T 1zh2_A 4 VLIVEDEQA-IRRFLRTALEGDGM---RVFEAETLQRGLLEAATRKPDLIILDLGLPD-GDGIEFIRDLRQWSAVPVIVL 78 (121)
T ss_dssp EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHHHHCCSEEEEESEETT-EEHHHHHHHHHTTCCCCEEEE
T ss_pred EEEEeCCHH-HHHHHHHHHhcCCC---EEEEeCCHHHHHHHHhcCCCCEEEEeCCCCC-CcHHHHHHHHHhCCCCcEEEE
Confidence 456665543 23445555554443 3544444434333332 3688776322221 345677777753 467664
Q ss_pred cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
+.... ..+.+..|..+++..|-++++|..++..++.
T Consensus 79 s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 117 (121)
T 1zh2_A 79 SARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR 117 (121)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHhcCCCeEEeCCcCHHHHHHHHHHHHH
Confidence 33332 3445667888999999999999999988764
No 153
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=42.51 E-value=45 Score=35.10 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=45.6
Q ss_pred CCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCC
Q 003758 141 VEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGI 218 (797)
Q Consensus 141 ~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~ 218 (797)
..++++++-|+...+ +..++.+++++.+. .. .++.+++.. .|+++..+... .-.-.++.|+..|+
T Consensus 53 ~~~~~~lvav~d~~~----~~a~~~a~~~g~~~----~y---~d~~ell~~~~iDaV~IatP~~--~H~~~a~~al~aGk 119 (393)
T 4fb5_A 53 DVERPRLVHLAEANA----GLAEARAGEFGFEK----AT---ADWRALIADPEVDVVSVTTPNQ--FHAEMAIAALEAGK 119 (393)
T ss_dssp SSCCCEEEEEECC------TTHHHHHHHHTCSE----EE---SCHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTC
T ss_pred cCCCcEEEEEECCCH----HHHHHHHHHhCCCe----ec---CCHHHHhcCCCCcEEEECCChH--HHHHHHHHHHhcCC
Confidence 346778544444333 55677788887752 22 356667764 68888765443 44567899999999
Q ss_pred cEEEcC
Q 003758 219 PVITPD 224 (797)
Q Consensus 219 PVIasd 224 (797)
+|++=.
T Consensus 120 hVl~EK 125 (393)
T 4fb5_A 120 HVWCEK 125 (393)
T ss_dssp EEEECS
T ss_pred eEEEcc
Confidence 998754
No 154
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=41.27 E-value=1.3e+02 Score=29.65 Aligned_cols=109 Identities=13% Similarity=0.101 Sum_probs=68.8
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCcE
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIPV 220 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~PV 220 (797)
.+ ++|+.+.+. ....+.......+. .|.......+....+.. .|++|+=-...+ .-|..+++.+.. .+||
T Consensus 38 ~~-ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~DlvllD~~lp~-~~G~~l~~~lr~~~~~~i 111 (249)
T 3q9s_A 38 QR-ILVIEDDHD-IANVLRMDLTDAGY---VVDHADSAMNGLIKAREDHPDLILLDLGLPD-FDGGDVVQRLRKNSALPI 111 (249)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHTTTC---EEEEESSHHHHHHHHHHSCCSEEEEECCSCH-HHHHHHHHHHHTTCCCCE
T ss_pred CE-EEEEECCHH-HHHHHHHHHHHCCC---EEEEeCCHHHHHHHHhcCCCCEEEEcCCCCC-CCHHHHHHHHHcCCCCCE
Confidence 56 466665543 23555555555443 46656665565555544 588887332221 346667777654 4777
Q ss_pred EEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Ias-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.- ... ...+.+..|..||+..+.++++|..+|..++..
T Consensus 112 I~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~~l~~ 154 (249)
T 3q9s_A 112 IVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQ 154 (249)
T ss_dssp EEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred EEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHhh
Confidence 753 333 244556678889999999999999999998864
No 155
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=40.84 E-value=1.1e+02 Score=29.34 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=67.1
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH--hCCcE
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT--FGIPV 220 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA--~G~PV 220 (797)
.+ ++++.+.+. ....+.......|. .|.......+....+.. .|++|+--...+ .-|..+++.+. ..+||
T Consensus 5 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~~~~~~~dlvllD~~l~~-~~g~~~~~~l~~~~~~~i 78 (230)
T 2oqr_A 5 TS-VLIVEDEES-LADPLAFLLRKEGF---EATVVTDGPAALAEFDRAGADIVLLDLMLPG-MSGTDVCKQLRARSSVPV 78 (230)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHHHTTC---EEEEECSHHHHHHHHHHHCCSEEEEESSCSS-SCHHHHHHHHHHHCSCSE
T ss_pred Ce-EEEEeCCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHhccCCCEEEEECCCCC-CCHHHHHHHHHcCCCCCE
Confidence 35 466665543 23556666666554 35555555555555543 688887433321 34666777665 37887
Q ss_pred EEcCCC----ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 221 ITPDFP----IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 221 Iasd~g----Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
|.-... ...+.+..|..|++..|.++++|..+|..++..
T Consensus 79 i~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 79 IMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 121 (230)
T ss_dssp EEEECCHHHHHHHHHHHHCCSCCCCSSCCHHHHHHHHHHHHTT
T ss_pred EEEeCCCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 754332 234455667889999999999999999887653
No 156
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=40.73 E-value=31 Score=30.14 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=65.5
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcC-CCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHh---C
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLG-LLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTF---G 217 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elg-L~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~---G 217 (797)
..+ ++++.+.+. ....+....+..| . .|.......+....+. ..|++|+-....+ .-|..+++.+.. .
T Consensus 14 ~~~-ilivdd~~~-~~~~l~~~L~~~g~~---~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~ 87 (135)
T 3snk_A 14 RKQ-VALFSSDPN-FKRDVATRLDALAIY---DVRVSETDDFLKGPPADTRPGIVILDLGGGD-LLGKPGIVEARALWAT 87 (135)
T ss_dssp CEE-EEEECSCHH-HHHHHHHHHHHTSSE---EEEEECGGGGGGCCCTTCCCSEEEEEEETTG-GGGSTTHHHHHGGGTT
T ss_pred CcE-EEEEcCCHH-HHHHHHHHHhhcCCe---EEEEeccHHHHHHHHhccCCCEEEEeCCCCC-chHHHHHHHHHhhCCC
Confidence 346 466665543 2456666677666 4 3555554444333333 3577776322221 234455665544 6
Q ss_pred CcEEEc-CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhC
Q 003758 218 IPVITP-DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 259 (797)
Q Consensus 218 ~PVIas-d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLed 259 (797)
+|||.- ... ...+.+..|..+++..|-++++|..+|..++..
T Consensus 88 ~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 88 VPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp CCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC--
T ss_pred CcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhcc
Confidence 787753 333 344556678899999999999999999988753
No 157
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=40.50 E-value=77 Score=33.25 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 160 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 160 e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+..++.+++++.+. .. .++.+++.. .|+++..+... .-.-.+++|+..|++|++=.
T Consensus 49 ~~a~~~a~~~g~~~----~~---~d~~~ll~~~~iDaV~I~tP~~--~H~~~~~~al~aGkhVl~EK 106 (390)
T 4h3v_A 49 EAVRAAAGKLGWST----TE---TDWRTLLERDDVQLVDVCTPGD--SHAEIAIAALEAGKHVLCEK 106 (390)
T ss_dssp HHHHHHHHHHTCSE----EE---SCHHHHTTCTTCSEEEECSCGG--GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCCc----cc---CCHHHHhcCCCCCEEEEeCChH--HHHHHHHHHHHcCCCceeec
Confidence 77888888888753 22 356666654 68888765444 44567899999999998754
No 158
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=39.62 E-value=1.2e+02 Score=28.71 Aligned_cols=105 Identities=16% Similarity=0.082 Sum_probs=62.8
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHH---hCCcEEEc-
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMT---FGIPVITP- 223 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIas- 223 (797)
++++.+.+. ....+.......+ .|.......+....+...|++++--...+ .-|..+++.+. ..+|||.-
T Consensus 5 ilivdd~~~-~~~~l~~~L~~~~----~v~~~~~~~~al~~~~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~~~ii~lt 78 (220)
T 1p2f_A 5 IAVVDDDKN-ILKKVSEKLQQLG----RVKTFLTGEDFLNDEEAFHVVVLDVMLPD-YSGYEICRMIKETRPETWVILLT 78 (220)
T ss_dssp EEEECSCHH-HHHHHHHHHTTTE----EEEEESSHHHHHHCCSCCSEEEEESBCSS-SBHHHHHHHHHHHCTTSEEEEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHhCC----CEEEECCHHHHHHhcCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCcEEEEE
Confidence 456665432 1233444443332 35555554444443356788887433221 34667777765 46887753
Q ss_pred CCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 224 DFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 224 d~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
... ...+.+..|..|++..|.++++|..+|..++.
T Consensus 79 ~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 116 (220)
T 1p2f_A 79 LLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLE 116 (220)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHc
Confidence 333 24455667888999999999999999987764
No 159
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=38.93 E-value=2.2e+02 Score=25.70 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=67.9
Q ss_pred CcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh--CCc
Q 003758 144 SFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF--GIP 219 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~--G~P 219 (797)
..+ ++|+.+.+. ....+.......+... .|.......+....+.. .|++|+-....+ .-|..+++.+.. .+|
T Consensus 25 ~~~-ILivdd~~~-~~~~l~~~L~~~~~~~-~v~~~~~~~~al~~l~~~~~dlvilD~~l~~-~~g~~l~~~lr~~~~~~ 100 (164)
T 3t8y_A 25 VIR-VLVVDDSAF-MRMVLKDIIDSQPDMK-VVGFAKDGLEAVEKAIELKPDVITMDIEMPN-LNGIEALKLIMKKAPTR 100 (164)
T ss_dssp CEE-EEEECSCHH-HHHHHHHHHHTSTTEE-EEEEESSHHHHHHHHHHHCCSEEEECSSCSS-SCHHHHHHHHHHHSCCE
T ss_pred ccE-EEEEcCCHH-HHHHHHHHHhcCCCeE-EEEecCCHHHHHHHhccCCCCEEEEeCCCCC-CCHHHHHHHHHhcCCce
Confidence 456 467765543 2345555555443221 23344555555555433 688887443331 456777776653 356
Q ss_pred EEE-cCCC-----ChhHhhhcCCeEEEEcCCC---------HHHHHHHHHHHHhCcc
Q 003758 220 VIT-PDFP-----IIKEYVAEGAQVIFFQKDN---------PEGLSRAFSLFISNGK 261 (797)
Q Consensus 220 VIa-sd~g-----Gi~EiI~Dg~nG~Lfd~~D---------~eeLAeaI~~LLedpe 261 (797)
||. +... ...+.+..|..+++..|-+ .+++.+++..++....
T Consensus 101 ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~r~~~~~l~~~i~~~~~~~~ 157 (164)
T 3t8y_A 101 VIMVSSLTEEGAAITIEALRNGAVDFITKPHGSISLTFRQVAPELLEKIRQAMNVDP 157 (164)
T ss_dssp EEEEESSCCTTCHHHHHHHHTTCCEEEECSSSSSCGGGGGGHHHHHHHHHHHTTSCC
T ss_pred EEEEecCCccchHHHHHHHHcCcCEEEeCCCCHHHHHHHhhhHHHHHHHHHHhCCCc
Confidence 653 2222 2346777889999999988 7888899988887554
No 160
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=38.35 E-value=51 Score=28.78 Aligned_cols=112 Identities=12% Similarity=0.071 Sum_probs=66.6
Q ss_pred cEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCC-CccHHHHHHHHh---CC
Q 003758 145 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQ-GFPSLIVRAMTF---GI 218 (797)
Q Consensus 145 vkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~-GFPlvLLEAMA~---G~ 218 (797)
.+ ++|+.+.+. ....+.......|. .|.......+....+. ..|++|+-....+. .-|..+++.+.. .+
T Consensus 7 ~~-ilivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~ 81 (136)
T 3kto_A 7 PI-IYLVDHQKD-ARAALSKLLSPLDV---TIQCFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHL 81 (136)
T ss_dssp CE-EEEECSCHH-HHHHHHHHHTTSSS---EEEEESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCC
T ss_pred Ce-EEEEcCCHH-HHHHHHHHHHHCCc---EEEEeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCC
Confidence 45 466665443 13445555554444 3555554444444333 25777763332200 235566666654 67
Q ss_pred cEEEc-CCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 219 PVITP-DFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 219 PVIas-d~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
|||.- .... ..+.+..|..+++..|-++++|..+|.+++....
T Consensus 82 ~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~~~~ 128 (136)
T 3kto_A 82 PTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIINGAK 128 (136)
T ss_dssp CEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHhccC
Confidence 87753 3332 4556677889999999999999999999986543
No 161
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=38.27 E-value=2.5e+02 Score=27.94 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=68.7
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh---
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF--- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~--- 216 (797)
...+ ++++-+.+.. ...+.......+. .|.......+....+.. .|++++=-...+ .-|..+++.+..
T Consensus 123 ~~~~-ILivDD~~~~-~~~l~~~L~~~~~---~v~~a~~~~eal~~l~~~~~~dlvllD~~mP~-~dG~~l~~~lr~~~~ 196 (259)
T 3luf_A 123 QQIE-VLVVDDSRTS-RHRTMAQLRKQLL---QVHEASHAREALATLEQHPAIRLVLVDYYMPE-IDGISLVRMLRERYS 196 (259)
T ss_dssp TTCE-EEEECSCHHH-HHHHHHHHHTTTC---EEEEESSHHHHHHHHHHCTTEEEEEECSCCSS-SCHHHHHHHHHHHCC
T ss_pred CCCc-EEEEeCCHHH-HHHHHHHHHHcCc---EEEEeCCHHHHHHHHhcCCCCCEEEEcCCCCC-CCHHHHHHHHHhccC
Confidence 3467 4677654431 2334444444333 46666666666666654 367776322221 346777877753
Q ss_pred --CCcEEE-cCCC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 217 --GIPVIT-PDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 217 --G~PVIa-sd~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
.+|||+ |... ...+.+..|..+|+..|-++++|...+..+++
T Consensus 197 ~~~~~ii~~s~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 244 (259)
T 3luf_A 197 KQQLAIIGISVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLE 244 (259)
T ss_dssp TTTSEEEEEECSSSSSHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEccCCHHHHHHHHhcChhheEcCCCCHHHHHHHHHHHHH
Confidence 477874 3332 24455778899999999999999999998876
No 162
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=37.63 E-value=77 Score=34.14 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=59.3
Q ss_pred CCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec
Q 003758 101 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180 (797)
Q Consensus 101 d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG 180 (797)
++..|++||.-.-- ..-++++..+....+ ...++++++-++. .+. +..++.+++++.+. ..
T Consensus 25 ~klrvgiIG~G~ig-------~~h~~~~~~~~~~~~---~~~~~~elvav~d--~~~--~~a~~~a~~~~~~~----~y- 85 (412)
T 4gqa_A 25 ARLNIGLIGSGFMG-------QAHADAYRRAAMFYP---DLPKRPHLYALAD--QDQ--AMAERHAAKLGAEK----AY- 85 (412)
T ss_dssp CEEEEEEECCSHHH-------HHHHHHHHHHHHHCT---TSSSEEEEEEEEC--SSH--HHHHHHHHHHTCSE----EE-
T ss_pred ccceEEEEcCcHHH-------HHHHHHHHhcccccc---ccCCCeEEEEEEc--CCH--HHHHHHHHHcCCCe----EE-
Confidence 45789999852111 123344443322111 1224567433333 232 77888888887752 22
Q ss_pred ChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCC
Q 003758 181 FNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF 225 (797)
Q Consensus 181 ~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~ 225 (797)
.++.+++. ..|+++..+... .-.-.+++|+..|++|++-.-
T Consensus 86 --~d~~~ll~~~~vD~V~I~tp~~--~H~~~~~~al~aGkhVl~EKP 128 (412)
T 4gqa_A 86 --GDWRELVNDPQVDVVDITSPNH--LHYTMAMAAIAAGKHVYCEKP 128 (412)
T ss_dssp --SSHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTCEEEEESC
T ss_pred --CCHHHHhcCCCCCEEEECCCcH--HHHHHHHHHHHcCCCeEeecC
Confidence 35666776 468888765443 445678999999999987543
No 163
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=37.05 E-value=49 Score=34.51 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=34.1
Q ss_pred hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChh
Q 003758 183 GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 229 (797)
Q Consensus 183 edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~ 229 (797)
.++.+++..+|++|-.|..+ ..--.+..|+..|+|+|+..+|...
T Consensus 65 ~dl~~ll~~~DVVIDfT~p~--a~~~~~~~al~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTLPE--GTLVHLDAALRHDVKLVIGTTGFSE 109 (272)
T ss_dssp CCHHHHHHHCSEEEECSCHH--HHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred CCHHHHhcCCCEEEEcCCHH--HHHHHHHHHHHcCCCEEEECCCCCH
Confidence 46788888999999766544 4445567889999999998777433
No 164
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=35.78 E-value=1.7e+02 Score=25.76 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=58.1
Q ss_pred CcEEEEEEeCCCCCC--HHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHH--hCCc
Q 003758 144 SFKFVFLCGNSTDGY--NDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMT--FGIP 219 (797)
Q Consensus 144 dvkfLIIvG~g~~~Y--~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA--~G~P 219 (797)
..+++++||.|-..- ...+++.+.+.|++- .|...+ ..++...+..+|+++.+.... +-..=++..+ .++|
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~-~i~~~~-~~~~~~~~~~~D~Ii~t~~l~---~~~~~~~~~~~~~~~p 78 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINA-TIEAIA-ETRLSEVVDRFDVVLLAPQSR---FNKKRLEEITKPKGIP 78 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSE-EEEEEC-STTHHHHTTTCSEEEECSCCS---SHHHHHHHHHHHHTCC
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCe-EEEEec-HHHHHhhcCCCCEEEECCccH---HHHHHHHHHhcccCCC
Confidence 356688999875431 346666677778763 454444 335666678999999865443 1122244433 5899
Q ss_pred EEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 220 VITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 220 VIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
|+.-+.-... ..|.+++.+.+..++.
T Consensus 79 v~~I~~~~y~-------------~~d~~~vl~~i~~~l~ 104 (109)
T 2l2q_A 79 IEIINTIDYG-------------TMNGEKVLQLAINAFN 104 (109)
T ss_dssp EEECCHHHHH-------------HTCHHHHHHHHHHHHH
T ss_pred EEEEChHHhc-------------cCCHHHHHHHHHHHHh
Confidence 9875432111 1356677777766664
No 165
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=35.27 E-value=2.6e+02 Score=28.64 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=67.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEE-EecChhhHHHHHHH--cCEEEE----ccCCCCCCccH-HHHHHH
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGDVNGVLLM--ADIVLY----GSSQVEQGFPS-LIVRAM 214 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~-flG~~edl~~~L~a--ADV~V~----PS~~Ee~GFPl-vLLEAM 214 (797)
...+ ++++.+.+.. ...+....+..|. .|. ......+....+.. .|++|+ |-... |+-. ..+-+.
T Consensus 159 l~~r-ILvVdD~~~~-~~~l~~~L~~~g~---~v~~~a~~g~eAl~~~~~~~~dlvl~D~~MPd~md--G~e~~~~ir~~ 231 (286)
T 3n0r_A 159 LATE-VLIIEDEPVI-AADIEALVRELGH---DVTDIAATRGEALEAVTRRTPGLVLADIQLADGSS--GIDAVKDILGR 231 (286)
T ss_dssp CCCE-EEEECCSHHH-HHHHHHHHHHTTC---EEEEEESSHHHHHHHHHHCCCSEEEEESCCTTSCC--TTTTTHHHHHH
T ss_pred CCCc-EEEEcCCHHH-HHHHHHHhhccCc---eEEEEeCCHHHHHHHHHhCCCCEEEEcCCCCCCCC--HHHHHHHHHhc
Confidence 3445 4667655432 4556666777776 355 56666666666654 578876 41223 3222 223333
Q ss_pred HhCCcEEEcC-CC-ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 215 TFGIPVITPD-FP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 215 A~G~PVIasd-~g-Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
. .+|||+-. .+ ...+.+..|.++++..|-++++|..+|..++...
T Consensus 232 ~-~~piI~lT~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~~~ 278 (286)
T 3n0r_A 232 M-DVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAIGQALFFH 278 (286)
T ss_dssp T-TCCEEEEESCGGGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHHHS
T ss_pred C-CCCEEEEeCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHhC
Confidence 3 89988532 22 2223344577889999999999999999998743
No 166
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=35.06 E-value=1.2e+02 Score=33.14 Aligned_cols=75 Identities=17% Similarity=0.014 Sum_probs=45.5
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHH---HcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhC
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVAS---RLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFG 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~---elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G 217 (797)
++++++-++...+ +..++.++ +.|++. .-.+.+...++.+++. ..|+++..+... .-.-.++.||..|
T Consensus 43 ~~~~lvav~d~~~----~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~--~h~~~~~~al~aG 115 (444)
T 2ixa_A 43 DDVEIVAFADPDP----YMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLKDKNIDAVFVSSPWE--WHHEHGVAAMKAG 115 (444)
T ss_dssp TTEEEEEEECSCH----HHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTTCTTCCEEEECCCGG--GHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCH----HHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhcCCCCCEEEEcCCcH--HHHHHHHHHHHCC
Confidence 6677444544332 45555444 456543 1223333446788887 488888866544 3455678899999
Q ss_pred CcEEEcC
Q 003758 218 IPVITPD 224 (797)
Q Consensus 218 ~PVIasd 224 (797)
++|++-.
T Consensus 116 khV~~EK 122 (444)
T 2ixa_A 116 KIVGMEV 122 (444)
T ss_dssp CEEEECC
T ss_pred CeEEEeC
Confidence 9998743
No 167
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=34.83 E-value=2.2e+02 Score=24.56 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=66.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----CCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----GIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G~PV 220 (797)
++++.+.+. ....+.......|. .|.......+....+.. .|++|+-....+ .-|..+++.+.. .+||
T Consensus 6 ILivdd~~~-~~~~l~~~L~~~g~---~v~~~~~~~~al~~l~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~i 80 (138)
T 3c3m_A 6 ILVVDDSPM-IVDVFVTMLERGGY---RPITAFSGEECLEALNATPPDLVLLDIMMEP-MDGWETLERIKTDPATRDIPV 80 (138)
T ss_dssp EEEECSCHH-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHSCCSEEEEESCCSS-SCHHHHHHHHHHSTTTTTSCE
T ss_pred EEEEeCCHH-HHHHHHHHHHHcCc---eEEEeCCHHHHHHHHhccCCCEEEEeCCCCC-CCHHHHHHHHHcCcccCCCCE
Confidence 466665543 23555666666555 35555555565555554 588887433321 346778888863 5787
Q ss_pred EE-cCCCC-hhHhhh--cCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 003758 221 IT-PDFPI-IKEYVA--EGAQVIFFQKDNPEGLSRAFSLFISNGK 261 (797)
Q Consensus 221 Ia-sd~gG-i~EiI~--Dg~nG~Lfd~~D~eeLAeaI~~LLedpe 261 (797)
|. +.... ...... -+..+++..|.+.++|..+|..++....
T Consensus 81 i~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~~~~~~ 125 (138)
T 3c3m_A 81 LMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARRH 125 (138)
T ss_dssp EEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHHSCC-
T ss_pred EEEECCCChHHHHHHhhcCHhheEeCCCCHHHHHHHHHHHHHHhh
Confidence 74 33332 222222 2346999999999999999999987544
No 168
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=34.28 E-value=83 Score=33.07 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=44.7
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++... . +..++.+++++... .. .++.+++. ..|+++..+... .-.-.+..|+..|++|
T Consensus 43 ~~~~lvav~d~~--~--~~~~~~a~~~~~~~----~~---~~~~~ll~~~~vD~V~i~tp~~--~H~~~~~~al~aGkhV 109 (340)
T 1zh8_A 43 HLFEITAVTSRT--R--SHAEEFAKMVGNPA----VF---DSYEELLESGLVDAVDLTLPVE--LNLPFIEKALRKGVHV 109 (340)
T ss_dssp TTEEEEEEECSS--H--HHHHHHHHHHSSCE----EE---SCHHHHHHSSCCSEEEECCCGG--GHHHHHHHHHHTTCEE
T ss_pred CceEEEEEEcCC--H--HHHHHHHHHhCCCc----cc---CCHHHHhcCCCCCEEEEeCCch--HHHHHHHHHHHCCCcE
Confidence 567743444422 2 67777778777531 22 35667776 479998866443 3345677999999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 110 l~EK 113 (340)
T 1zh8_A 110 ICEK 113 (340)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8753
No 169
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=34.16 E-value=1.1e+02 Score=31.48 Aligned_cols=69 Identities=14% Similarity=0.234 Sum_probs=45.4
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEE
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVI 221 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVI 221 (797)
.++++++-++.. +. +..++.+++.+... . .++.+++...|+++..+... ...-.+.+|+..|++|+
T Consensus 29 ~~~~~l~av~d~--~~--~~~~~~a~~~~~~~-----~---~~~~~ll~~~D~V~i~tp~~--~h~~~~~~al~~gk~vl 94 (308)
T 3uuw_A 29 SERFEFVGAFTP--NK--VKREKICSDYRIMP-----F---DSIESLAKKCDCIFLHSSTE--THYEIIKILLNLGVHVY 94 (308)
T ss_dssp CSSSEEEEEECS--CH--HHHHHHHHHHTCCB-----C---SCHHHHHTTCSEEEECCCGG--GHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEEECC--CH--HHHHHHHHHcCCCC-----c---CCHHHHHhcCCEEEEeCCcH--hHHHHHHHHHHCCCcEE
Confidence 366774224432 22 66777778777641 2 35566666999999866554 44556788999999998
Q ss_pred EcC
Q 003758 222 TPD 224 (797)
Q Consensus 222 asd 224 (797)
+-.
T Consensus 95 ~EK 97 (308)
T 3uuw_A 95 VDK 97 (308)
T ss_dssp ECS
T ss_pred EcC
Confidence 754
No 170
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=34.01 E-value=1.2e+02 Score=32.84 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCCCeEEEecChhhHHHHHHH-------cCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 160 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLM-------ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 160 e~Leela~elgL~d~~V~flG~~edl~~~L~a-------ADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+..++.+++++++. ... ..++.+++.. .|+++..+... .-.-.+..|+..|++|++-.
T Consensus 77 ~~a~~~a~~~g~~~--~~~---~~~~~~ll~~~~~~~~~vD~V~I~tp~~--~H~~~~~~al~aGkhVl~EK 141 (417)
T 3v5n_A 77 EKAEASGRELGLDP--SRV---YSDFKEMAIREAKLKNGIEAVAIVTPNH--VHYAAAKEFLKRGIHVICDK 141 (417)
T ss_dssp HHHHHHHHHHTCCG--GGB---CSCHHHHHHHHHHCTTCCSEEEECSCTT--SHHHHHHHHHTTTCEEEEES
T ss_pred HHHHHHHHHcCCCc--ccc---cCCHHHHHhcccccCCCCcEEEECCCcH--HHHHHHHHHHhCCCeEEEEC
Confidence 67788888888762 112 2366777776 89999876554 44567788999999998754
No 171
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=33.89 E-value=49 Score=29.84 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=49.0
Q ss_pred CCcEEEEEEeCCCCC--CHHHHHHHHHHcCCCCCeEEEec-ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHh--C
Q 003758 143 GSFKFVFLCGNSTDG--YNDALQEVASRLGLLEHSVRHYG-FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTF--G 217 (797)
Q Consensus 143 pdvkfLIIvG~g~~~--Y~e~Leela~elgL~d~~V~flG-~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~--G 217 (797)
...+++++|+.|-.. -...+++.+++.|++ +.+.. ...++...+...|+++++.-. .|-..=++..+- |
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~---v~i~a~~~~~~~~~~~~~DvvLLgPQV---~y~~~~ik~~~~~~~ 78 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR---VIANSGAYGAHYDIMGVYDLIILAPQV---RSYYREMKVDAERLG 78 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS---EEEEEEETTSCTTTGGGCSEEEECGGG---GGGHHHHHHHHTTTT
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc---eEEEEcchHHHHhhccCCCEEEEChHH---HHHHHHHHHHhhhcC
Confidence 456778899987532 124556667777876 44433 333466667889999984322 233444666654 8
Q ss_pred CcEEEcCCC
Q 003758 218 IPVITPDFP 226 (797)
Q Consensus 218 ~PVIasd~g 226 (797)
+||.+.+..
T Consensus 79 ipV~vI~~~ 87 (108)
T 3nbm_A 79 IQIVATRGM 87 (108)
T ss_dssp CEEEECCHH
T ss_pred CcEEEeCHH
Confidence 999887654
No 172
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=32.30 E-value=63 Score=33.74 Aligned_cols=40 Identities=13% Similarity=0.183 Sum_probs=29.7
Q ss_pred hhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 183 GDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 183 edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
.++.+++. ..|+++..+... .-.-.+..|+..|++|++-.
T Consensus 57 ~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~aGk~Vl~EK 98 (329)
T 3evn_A 57 DKLEDMLADESIDVIYVATINQ--DHYKVAKAALLAGKHVLVEK 98 (329)
T ss_dssp SCHHHHHTCTTCCEEEECSCGG--GHHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHhcCCCCCEEEECCCcH--HHHHHHHHHHHCCCeEEEcc
Confidence 46777787 789998866544 34456788999999999754
No 173
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=32.12 E-value=31 Score=34.40 Aligned_cols=68 Identities=22% Similarity=0.181 Sum_probs=42.7
Q ss_pred hHHHHHHHcCEEEE-ccCCCCCCccH--HHHHHHHhCCcEEEcCCCC-hhHhhh----cC------CeEEEEcCCCHHHH
Q 003758 184 DVNGVLLMADIVLY-GSSQVEQGFPS--LIVRAMTFGIPVITPDFPI-IKEYVA----EG------AQVIFFQKDNPEGL 249 (797)
Q Consensus 184 dl~~~L~aADV~V~-PS~~Ee~GFPl--vLLEAMA~G~PVIasd~gG-i~EiI~----Dg------~nG~Lfd~~D~eeL 249 (797)
--.-+...||.+|. |. |+|. .+.||+..++||++-+..+ ....+. ++ ....+.-.+|++++
T Consensus 111 Rk~~m~~~sda~IvlpG-----G~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~ 185 (195)
T 1rcu_A 111 RSFVLLRNADVVVSIGG-----EIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEA 185 (195)
T ss_dssp HHHHHHTTCSEEEEESC-----CHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHH
T ss_pred HHHHHHHhCCEEEEecC-----CCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHH
Confidence 34456677888776 32 4443 6778899999999997553 332332 21 11234445789999
Q ss_pred HHHHHHH
Q 003758 250 SRAFSLF 256 (797)
Q Consensus 250 AeaI~~L 256 (797)
.+.|.++
T Consensus 186 ~~~l~~~ 192 (195)
T 1rcu_A 186 VQIIEQI 192 (195)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 8887654
No 174
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=31.95 E-value=1.7e+02 Score=30.36 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=42.3
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++.++.. +. +..++.+++++... .. .++.+++. .+|+++..+... ...-.+.+|+..|++|
T Consensus 32 ~~~~~vav~d~--~~--~~~~~~a~~~g~~~----~~---~~~~~~l~~~~~D~V~i~tp~~--~h~~~~~~al~~G~~v 98 (346)
T 3cea_A 32 QGVKLVAACAL--DS--NQLEWAKNELGVET----TY---TNYKDMIDTENIDAIFIVAPTP--FHPEMTIYAMNAGLNV 98 (346)
T ss_dssp SSEEEEEEECS--CH--HHHHHHHHTTCCSE----EE---SCHHHHHTTSCCSEEEECSCGG--GHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEecC--CH--HHHHHHHHHhCCCc----cc---CCHHHHhcCCCCCEEEEeCChH--hHHHHHHHHHHCCCEE
Confidence 56773333332 22 56666677666531 22 35666776 589999866544 3345677899999999
Q ss_pred EEc
Q 003758 221 ITP 223 (797)
Q Consensus 221 Ias 223 (797)
++-
T Consensus 99 ~~e 101 (346)
T 3cea_A 99 FCE 101 (346)
T ss_dssp EEC
T ss_pred EEc
Confidence 974
No 175
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=31.86 E-value=4.1e+02 Score=28.42 Aligned_cols=106 Identities=11% Similarity=-0.015 Sum_probs=68.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHh-----CCcE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTF-----GIPV 220 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~-----G~PV 220 (797)
++|+.+.+. ....+.......|. .|.......+....+.. .|++|+=-...+ .-|..+++.+.. .+||
T Consensus 4 iLivdD~~~-~~~~l~~~L~~~~~---~v~~a~~~~~al~~~~~~~~dlvllD~~mp~-~~G~~~~~~l~~~~~~~~~pi 78 (459)
T 1w25_A 4 ILVVDDIEA-NVRLLEAKLTAEYY---EVSTAMDGPTALAMAARDLPDIILLDVMMPG-MDGFTVCRKLKDDPTTRHIPV 78 (459)
T ss_dssp EEEECSSTT-HHHHHHHHHHHTTC---EEEEESSHHHHHHHHHHHCCSEEEEESCCSS-SCHHHHHHHHHHSTTTTTSCE
T ss_pred EEEEeCCHH-HHHHHHHHHHHcCC---EEEEECCHHHHHHHHhcCCCCEEEEcCCCCC-CCHHHHHHHHhcCcccCCCCE
Confidence 466666544 24556666665554 46666665565555543 588887333321 346777888764 5787
Q ss_pred EE-cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 221 IT-PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 221 Ia-sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
|. |.... ..+.+..|..+|+..|-++++|..+|..++.
T Consensus 79 i~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~l~~~i~~~~~ 120 (459)
T 1w25_A 79 VLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR 120 (459)
T ss_dssp EEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 75 34332 3445667889999999999999999988864
No 176
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=30.84 E-value=1.1e+02 Score=32.34 Aligned_cols=68 Identities=18% Similarity=0.106 Sum_probs=44.0
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++... . +..++.+++.+.+. . .++.+++. ..|+++..+... .-.-.+..|+..|++|
T Consensus 51 ~~~~l~av~d~~--~--~~~~~~a~~~g~~~-----~---~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~aGk~V 116 (350)
T 3rc1_A 51 PLTEVTAIASRR--W--DRAKRFTERFGGEP-----V---EGYPALLERDDVDAVYVPLPAV--LHAEWIDRALRAGKHV 116 (350)
T ss_dssp TTEEEEEEEESS--H--HHHHHHHHHHCSEE-----E---ESHHHHHTCTTCSEEEECCCGG--GHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEEcCC--H--HHHHHHHHHcCCCC-----c---CCHHHHhcCCCCCEEEECCCcH--HHHHHHHHHHHCCCcE
Confidence 567743344432 2 66777777776641 2 46677776 589998866544 3445678899999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 117 l~EK 120 (350)
T 3rc1_A 117 LAEK 120 (350)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8744
No 177
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=30.78 E-value=1.9e+02 Score=31.07 Aligned_cols=57 Identities=16% Similarity=0.106 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCCCeEEEecChhhHHHHHHH-------cCEEEEccCCCCCCccHHHHHHHHhCCcEEEc
Q 003758 160 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLM-------ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 223 (797)
Q Consensus 160 e~Leela~elgL~d~~V~flG~~edl~~~L~a-------ADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIas 223 (797)
+..++.++++|++. ... ..++.+++.. .|+++..+... .-.-.+.+|+..|++|++=
T Consensus 52 ~~a~~~a~~~g~~~--~~~---~~~~~~ll~~~~~~~~~vD~V~i~tp~~--~H~~~~~~al~aGkhVl~E 115 (398)
T 3dty_A 52 IRGSAFGEQLGVDS--ERC---YADYLSMFEQEARRADGIQAVSIATPNG--THYSITKAALEAGLHVVCE 115 (398)
T ss_dssp HHHHHHHHHTTCCG--GGB---CSSHHHHHHHHTTCTTCCSEEEEESCGG--GHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHhCCCc--cee---eCCHHHHHhcccccCCCCCEEEECCCcH--HHHHHHHHHHHCCCeEEEe
Confidence 77788888888762 112 2466777776 89988865444 3446678999999999873
No 178
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=30.75 E-value=96 Score=27.22 Aligned_cols=104 Identities=9% Similarity=0.028 Sum_probs=53.2
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHc-CCCCCeEEEecChhhHHHHHHH---cCEEEEccCCCCCCccHHHHHHHHh--
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVRAMTF-- 216 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~el-gL~d~~V~flG~~edl~~~L~a---ADV~V~PS~~Ee~GFPlvLLEAMA~-- 216 (797)
+..+ ++++.+.+. ....+....++. +.. .|.......+....+.. .|++|+-....+ .-|..+++.+..
T Consensus 12 ~~~~-vlivdd~~~-~~~~l~~~L~~~~~~~--~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~-~~g~~~~~~lr~~~ 86 (145)
T 3kyj_B 12 SPYN-VMIVDDAAM-MRLYIASFIKTLPDFK--VVAQAANGQEALDKLAAQPNVDLILLDIEMPV-MDGMEFLRHAKLKT 86 (145)
T ss_dssp CSEE-EEEECSCHH-HHHHHHHHHTTCTTEE--EEEEESSHHHHHHHHHHCTTCCEEEECTTSCC-CTTCHHHHHHHHHC
T ss_pred CCCe-EEEEcCCHH-HHHHHHHHHHhCCCce--EEEEECCHHHHHHHHhcCCCCCEEEEeCCCCC-CCHHHHHHHHHhcC
Confidence 4455 466665432 233444444433 221 13344555565555543 588887433321 446667776653
Q ss_pred CCcEEEcC---CC---ChhHhhhcCCeEEEEcCCCHHHHHH
Q 003758 217 GIPVITPD---FP---IIKEYVAEGAQVIFFQKDNPEGLSR 251 (797)
Q Consensus 217 G~PVIasd---~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAe 251 (797)
..|+|.-. .. ...+.+..|..+|+..|-++++|..
T Consensus 87 ~~~iiil~~~~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 127 (145)
T 3kyj_B 87 RAKICMLSSVAVSGSPHAARARELGADGVVAKPSGTVSHDL 127 (145)
T ss_dssp CCEEC-CBSSCSTTSSHHHHHHHTTCSCCCBCCCSCC----
T ss_pred CCCeEEEEEeccCChHHHHHHHhCCCCEEEeCCCCHHHHHH
Confidence 34544321 11 2456677788899998888554433
No 179
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=28.79 E-value=1.8e+02 Score=30.26 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=45.2
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCCc
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIP 219 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~P 219 (797)
.++++++-++. .+. +..++.++++++. +... .++.+++.. .|+++..+... .-.-.+.+|+..|++
T Consensus 25 ~~~~~l~av~d--~~~--~~~~~~~~~~g~~---~~~~---~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~~Gk~ 92 (344)
T 3mz0_A 25 LSGAEIVAVTD--VNQ--EAAQKVVEQYQLN---ATVY---PNDDSLLADENVDAVLVTSWGP--AHESSVLKAIKAQKY 92 (344)
T ss_dssp CSSEEEEEEEC--SSH--HHHHHHHHHTTCC---CEEE---SSHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTCE
T ss_pred CCCcEEEEEEc--CCH--HHHHHHHHHhCCC---Ceee---CCHHHHhcCCCCCEEEECCCch--hHHHHHHHHHHCCCc
Confidence 35677422333 222 6777778877752 2223 356677776 89998866444 445567789999999
Q ss_pred EEEcC
Q 003758 220 VITPD 224 (797)
Q Consensus 220 VIasd 224 (797)
|++-.
T Consensus 93 vl~EK 97 (344)
T 3mz0_A 93 VFCEK 97 (344)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99743
No 180
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=28.22 E-value=1.3e+02 Score=32.20 Aligned_cols=68 Identities=16% Similarity=0.252 Sum_probs=43.9
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++. .+. +..++.+++++.+ .. .++.+++.. .|+++..+... .-.-.+..|+..|++|
T Consensus 26 ~~~~l~av~d--~~~--~~~~~~a~~~g~~-----~~---~~~~ell~~~~vD~V~i~tp~~--~H~~~~~~al~aGk~V 91 (387)
T 3moi_A 26 PDAQIVAACD--PNE--DVRERFGKEYGIP-----VF---ATLAEMMQHVQMDAVYIASPHQ--FHCEHVVQASEQGLHI 91 (387)
T ss_dssp TTEEEEEEEC--SCH--HHHHHHHHHHTCC-----EE---SSHHHHHHHSCCSEEEECSCGG--GHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEEe--CCH--HHHHHHHHHcCCC-----eE---CCHHHHHcCCCCCEEEEcCCcH--HHHHHHHHHHHCCCce
Confidence 5677433333 222 6666777777653 22 366777776 89999866544 3345678999999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 92 l~EK 95 (387)
T 3moi_A 92 IVEK 95 (387)
T ss_dssp EECS
T ss_pred eeeC
Confidence 8754
No 181
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=27.45 E-value=1.1e+02 Score=32.14 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=45.1
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCc
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIP 219 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~P 219 (797)
.++++++-++.. +. +..++.+++.+... .. .++.+++. .+|+++..+... .....+.+|+..|++
T Consensus 24 ~~~~~l~av~d~--~~--~~~~~~~~~~~~~~----~~---~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~ 90 (344)
T 3ezy_A 24 IDDAILYAISDV--RE--DRLREMKEKLGVEK----AY---KDPHELIEDPNVDAVLVCSSTN--THSELVIACAKAKKH 90 (344)
T ss_dssp STTEEEEEEECS--CH--HHHHHHHHHHTCSE----EE---SSHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTCE
T ss_pred CCCcEEEEEECC--CH--HHHHHHHHHhCCCc----ee---CCHHHHhcCCCCCEEEEcCCCc--chHHHHHHHHhcCCe
Confidence 356774234432 22 66677777776532 12 36677777 789999866544 344567789999999
Q ss_pred EEEcC
Q 003758 220 VITPD 224 (797)
Q Consensus 220 VIasd 224 (797)
|++-.
T Consensus 91 v~~EK 95 (344)
T 3ezy_A 91 VFCEK 95 (344)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 98754
No 182
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=26.56 E-value=1.6e+02 Score=30.95 Aligned_cols=69 Identities=12% Similarity=0.159 Sum_probs=44.6
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHH--HHcCEEEEccCCCCCCccHHHHHHHHhCCc
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIP 219 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L--~aADV~V~PS~~Ee~GFPlvLLEAMA~G~P 219 (797)
.++++++-++. .+. +..++.+++.+.+. ..++.+++ ...|+++..+... .-...+..|+..|++
T Consensus 27 ~~~~~lvav~d--~~~--~~~~~~~~~~g~~~--------~~~~~~~l~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~ 92 (354)
T 3db2_A 27 SEKLKLVTCYS--RTE--DKREKFGKRYNCAG--------DATMEALLAREDVEMVIITVPND--KHAEVIEQCARSGKH 92 (354)
T ss_dssp CSSEEEEEEEC--SSH--HHHHHHHHHHTCCC--------CSSHHHHHHCSSCCEEEECSCTT--SHHHHHHHHHHTTCE
T ss_pred CCCcEEEEEEC--CCH--HHHHHHHHHcCCCC--------cCCHHHHhcCCCCCEEEEeCChH--HHHHHHHHHHHcCCE
Confidence 35677433333 222 66777777776642 24677777 4588888866544 445567889999999
Q ss_pred EEEcC
Q 003758 220 VITPD 224 (797)
Q Consensus 220 VIasd 224 (797)
|++-.
T Consensus 93 vl~EK 97 (354)
T 3db2_A 93 IYVEK 97 (354)
T ss_dssp EEEES
T ss_pred EEEcc
Confidence 98754
No 183
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=26.40 E-value=2.3e+02 Score=29.88 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=44.8
Q ss_pred CCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCc
Q 003758 142 EGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIP 219 (797)
Q Consensus 142 ~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~P 219 (797)
.++++++-++...+ +..++.++++++. +... .++.+++. ..|+++..+... .-.-.+..|+..|++
T Consensus 46 ~~~~~lvav~d~~~----~~~~~~a~~~g~~---~~~~---~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~aGk~ 113 (357)
T 3ec7_A 46 VSGVEVVAVCDIVA----GRAQAALDKYAIE---AKDY---NDYHDLINDKDVEVVIITASNE--AHADVAVAALNANKY 113 (357)
T ss_dssp CTTEEEEEEECSST----THHHHHHHHHTCC---CEEE---SSHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTCE
T ss_pred CCCcEEEEEEeCCH----HHHHHHHHHhCCC---Ceee---CCHHHHhcCCCCCEEEEcCCcH--HHHHHHHHHHHCCCC
Confidence 35677433444332 5667777777752 2223 35666676 489998866444 445567889999999
Q ss_pred EEEcC
Q 003758 220 VITPD 224 (797)
Q Consensus 220 VIasd 224 (797)
|++-.
T Consensus 114 Vl~EK 118 (357)
T 3ec7_A 114 VFCEK 118 (357)
T ss_dssp EEEES
T ss_pred EEeec
Confidence 98754
No 184
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=25.51 E-value=2e+02 Score=29.97 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=43.9
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++. .+. +..++.+++++. ... .++.+++. .+|+++..+... ...-.+.+|+..|++|
T Consensus 27 ~~~~l~av~d--~~~--~~~~~~a~~~g~-----~~~---~~~~~~l~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~v 92 (344)
T 3euw_A 27 PDLELVVIAD--PFI--EGAQRLAEANGA-----EAV---ASPDEVFARDDIDGIVIGSPTS--THVDLITRAVERGIPA 92 (344)
T ss_dssp TTEEEEEEEC--SSH--HHHHHHHHTTTC-----EEE---SSHHHHTTCSCCCEEEECSCGG--GHHHHHHHHHHTTCCE
T ss_pred CCcEEEEEEC--CCH--HHHHHHHHHcCC-----cee---CCHHHHhcCCCCCEEEEeCCch--hhHHHHHHHHHcCCcE
Confidence 5677322333 222 666676776552 222 36677777 789999866544 4455678899999999
Q ss_pred EEcCC
Q 003758 221 ITPDF 225 (797)
Q Consensus 221 Iasd~ 225 (797)
++-..
T Consensus 93 ~~EKP 97 (344)
T 3euw_A 93 LCEKP 97 (344)
T ss_dssp EECSC
T ss_pred EEECC
Confidence 97543
No 185
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=25.42 E-value=1.9e+02 Score=29.91 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++. .+. +..++.+++.+. . ..++.+++. .+|+++..+... ...-.+..|+..|++|
T Consensus 26 ~~~~l~av~d--~~~--~~~~~~~~~~~~-----~----~~~~~~~l~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~v 90 (331)
T 4hkt_A 26 ADARLVAVAD--AFP--AAAEAIAGAYGC-----E----VRTIDAIEAAADIDAVVICTPTD--THADLIERFARAGKAI 90 (331)
T ss_dssp TTEEEEEEEC--SSH--HHHHHHHHHTTC-----E----ECCHHHHHHCTTCCEEEECSCGG--GHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEEC--CCH--HHHHHHHHHhCC-----C----cCCHHHHhcCCCCCEEEEeCCch--hHHHHHHHHHHcCCcE
Confidence 5677322333 222 666777776543 2 246777777 789998866444 4455678899999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 91 ~~EK 94 (331)
T 4hkt_A 91 FCEK 94 (331)
T ss_dssp EECS
T ss_pred EEec
Confidence 9754
No 186
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.61 E-value=2.6e+02 Score=29.29 Aligned_cols=68 Identities=24% Similarity=0.341 Sum_probs=42.8
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++. .+. +..++.+++.+. ... .++.+++. ..|+++..+... .-.-.+.+|+..|++|
T Consensus 37 ~~~~lvav~d--~~~--~~~~~~~~~~~~-----~~~---~~~~~ll~~~~~D~V~i~tp~~--~h~~~~~~al~~gk~v 102 (354)
T 3q2i_A 37 DRAELIDVCD--IDP--AALKAAVERTGA-----RGH---ASLTDMLAQTDADIVILTTPSG--LHPTQSIECSEAGFHV 102 (354)
T ss_dssp TTEEEEEEEC--SSH--HHHHHHHHHHCC-----EEE---SCHHHHHHHCCCSEEEECSCGG--GHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEEc--CCH--HHHHHHHHHcCC-----cee---CCHHHHhcCCCCCEEEECCCcH--HHHHHHHHHHHCCCCE
Confidence 5677322333 232 667777777664 223 35666676 689998866443 3345678899999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 103 ~~EK 106 (354)
T 3q2i_A 103 MTEK 106 (354)
T ss_dssp EECS
T ss_pred EEeC
Confidence 8744
No 187
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=24.27 E-value=4.1e+02 Score=28.38 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=68.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++|+.+.+. ....+.......|. .|.......+....+.. .|++|+=-...+ .-|..+++.+. ..+|||.
T Consensus 3 ILIVDDd~~-~~~~l~~~L~~~g~---~v~~a~~~~eal~~l~~~~~DlvllD~~mp~-~dG~ell~~lr~~~~~~pvIv 77 (387)
T 1ny5_A 3 VLVIEDDKV-FRGLLEEYLSMKGI---KVESAERGKEAYKLLSEKHFNVVLLDLLLPD-VNGLEILKWIKERSPETEVIV 77 (387)
T ss_dssp EEEECCCHH-HHHHHHHHHHHHTC---EEEEESSHHHHHHHHHHSCCSEEEEESBCSS-SBHHHHHHHHHHHCTTSEEEE
T ss_pred EEEEECCHH-HHHHHHHHHHHCCC---EEEEECCHHHHHHHHHhCCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCcEEE
Confidence 355655443 23455555555565 36666666666566554 578876332221 34677777765 3577764
Q ss_pred -cCCCC---hhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 223 -PDFPI---IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 223 -sd~gG---i~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|..+. ..+.+..|..+|+..|-++++|..+|.+++...
T Consensus 78 lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~~~ 119 (387)
T 1ny5_A 78 ITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHR 119 (387)
T ss_dssp EEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhcCceEEecCCCCHHHHHHHHHHHHHHH
Confidence 33332 445566788899999999999999999887533
No 188
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=24.03 E-value=1.3e+02 Score=31.08 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=42.0
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHH-HHcCEEEEccCCCCCCccHHHHHHHHhCCcEE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL-LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVI 221 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L-~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVI 221 (797)
++++++.++. .+. +..++.+++++.. .... ++.+++ ..+|+++..+... ...-.+.+|+..|++|+
T Consensus 24 ~~~~~~~v~d--~~~--~~~~~~~~~~~~~----~~~~---~~~~~l~~~~D~V~i~tp~~--~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 24 GEYQLVAIYS--RKL--ETAATFASRYQNI----QLFD---QLEVFFKSSFDLVYIASPNS--LHFAQAKAALSAGKHVI 90 (325)
T ss_dssp TSEEEEEEEC--SSH--HHHHHHGGGSSSC----EEES---CHHHHHTSSCSEEEECSCGG--GHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe--CCH--HHHHHHHHHcCCC----eEeC---CHHHHhCCCCCEEEEeCChH--HHHHHHHHHHHcCCcEE
Confidence 4566333443 222 5556666655532 2233 455666 5789999876544 44566788999999998
Q ss_pred EcC
Q 003758 222 TPD 224 (797)
Q Consensus 222 asd 224 (797)
+-.
T Consensus 91 ~EK 93 (325)
T 2ho3_A 91 LEK 93 (325)
T ss_dssp EES
T ss_pred Eec
Confidence 753
No 189
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=23.89 E-value=91 Score=33.08 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=41.1
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHc--CEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMA--DIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aA--DV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++++++-++...+ +..++.+++++.. ... .++.+++... |+++..+... .-.-.+.+|+..|++|
T Consensus 29 ~~~~l~av~d~~~----~~~~~~a~~~~~~----~~~---~~~~~ll~~~~vD~V~i~tp~~--~H~~~~~~al~aGkhV 95 (359)
T 3m2t_A 29 QDIRIVAACDSDL----ERARRVHRFISDI----PVL---DNVPAMLNQVPLDAVVMAGPPQ--LHFEMGLLAMSKGVNV 95 (359)
T ss_dssp TTEEEEEEECSSH----HHHGGGGGTSCSC----CEE---SSHHHHHHHSCCSEEEECSCHH--HHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEEcCCH----HHHHHHHHhcCCC----ccc---CCHHHHhcCCCCCEEEEcCCcH--HHHHHHHHHHHCCCeE
Confidence 5677433444322 4555555543322 122 4677777765 8888865443 3345678899999999
Q ss_pred EEcC
Q 003758 221 ITPD 224 (797)
Q Consensus 221 Iasd 224 (797)
++-.
T Consensus 96 l~EK 99 (359)
T 3m2t_A 96 FVEK 99 (359)
T ss_dssp EECS
T ss_pred EEEC
Confidence 8743
No 190
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=23.37 E-value=1.4e+02 Score=26.48 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=43.5
Q ss_pred EEEEEEeCCCCC--CHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcE
Q 003758 146 KFVFLCGNSTDG--YNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 220 (797)
Q Consensus 146 kfLIIvG~g~~~--Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PV 220 (797)
++|++||.|-.. -...+++.+++.|++- .|...+ ..++...+..+|+++++... .+-..-++..+-.+||
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~~-~i~a~~-~~~~~~~~~~~Dvil~~pqv---~~~~~~~~~~~~~~~v 76 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVPV-IIEAFP-ETLAGEKGQNADVVLLGPQI---AYMLPEIQRLLPNKPV 76 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCSE-EEEEEC-SSSTTHHHHHCSEEEECTTS---GGGHHHHHHHSSSSCC
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCCe-EEEEec-HHHHHhhccCCCEEEEccch---hhhHHHHHHHhcCCCc
Confidence 468899988654 1345666777888874 455554 33555668899999986543 3344445555434443
No 191
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=23.18 E-value=1.7e+02 Score=28.09 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=53.2
Q ss_pred HHHHHHHHHHcCCCCCeEEEecC--hhhHHHHHHH----cC-EEEEccCCCCCCccHHHHHHH----HhCCcEEEcCCC-
Q 003758 159 NDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLM----AD-IVLYGSSQVEQGFPSLIVRAM----TFGIPVITPDFP- 226 (797)
Q Consensus 159 ~e~Leela~elgL~d~~V~flG~--~edl~~~L~a----AD-V~V~PS~~Ee~GFPlvLLEAM----A~G~PVIasd~g- 226 (797)
...+++.+.++|+. |.+..+ ..++.+.+.. +| +++.|.-+- ..+..+..|+ +.++|+|=--.+
T Consensus 35 ~~~l~~~a~~~g~~---v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~T--HtSvAlrDAl~~l~~~~~P~VEVHiSN 109 (151)
T 3u80_A 35 RKLCAEWGKDLGLE---VEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFT--HYSYALADAAHMVIDENLPLMEVHISN 109 (151)
T ss_dssp HHHHHHHHHHTTEE---EEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCC--SCCHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHcCCE---EEEEecCCHHHHHHHHHHhhhcCcEEEECcchhh--hhhHHHHHHHHHHhhcCCCEEEEEcCC
Confidence 34555566667763 666663 3345555544 34 666787775 6899999994 459999943222
Q ss_pred -ChhH------hhhcCCeEEEEcCCCHHHHHHHHHHH
Q 003758 227 -IIKE------YVAEGAQVIFFQKDNPEGLSRAFSLF 256 (797)
Q Consensus 227 -Gi~E------iI~Dg~nG~Lfd~~D~eeLAeaI~~L 256 (797)
..+| ++.+-..|.++-.+ .+...-++..+
T Consensus 110 i~aRE~FRh~S~~s~~a~G~I~G~G-~~gY~lAl~~~ 145 (151)
T 3u80_A 110 PSARDEFRKRSVISPVATGTITGMG-FYGYKLALDAV 145 (151)
T ss_dssp CC---------CSCCCCSEEEESST-THHHHHHHHHH
T ss_pred cccccchhhcccccccceEEEEecC-hHHHHHHHHHH
Confidence 3344 55555668777543 33344444433
No 192
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=22.95 E-value=1.8e+02 Score=29.77 Aligned_cols=74 Identities=9% Similarity=0.004 Sum_probs=44.3
Q ss_pred EEEEe-CCCCCCHHHHHHHHHHc-CCCCCeEEEecChhhHHHHHH-HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 148 VFLCG-NSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 148 LIIvG-~g~~~Y~e~Leela~el-gL~d~~V~flG~~edl~~~L~-aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+.|+| .|.-. ..+.+.+.+. +.. -+-.....+++..++. .+|++|=-|..+ ..--.+..|...|+|+|+..
T Consensus 3 V~V~Ga~G~mG--~~i~~~~~~~~~~e--lva~~d~~~dl~~~~~~~~DvvIDfT~p~--a~~~~~~~a~~~g~~~VigT 76 (245)
T 1p9l_A 3 VGVLGAKGKVG--TTMVRAVAAADDLT--LSAELDAGDPLSLLTDGNTEVVIDFTHPD--VVMGNLEFLIDNGIHAVVGT 76 (245)
T ss_dssp EEEETTTSHHH--HHHHHHHHHCTTCE--EEEEECTTCCTHHHHHTTCCEEEECSCTT--THHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCHHH--HHHHHHHHhCCCCE--EEEEEccCCCHHHHhccCCcEEEEccChH--HHHHHHHHHHHcCCCEEEcC
Confidence 46777 46554 5555555433 332 1223334456666665 799999445444 44445556788999999876
Q ss_pred CCC
Q 003758 225 FPI 227 (797)
Q Consensus 225 ~gG 227 (797)
.|.
T Consensus 77 TG~ 79 (245)
T 1p9l_A 77 TGF 79 (245)
T ss_dssp CCC
T ss_pred CCC
Confidence 664
No 193
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.24 E-value=8.8e+02 Score=27.38 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=66.2
Q ss_pred ccHHHHHHHHHHHHHHHhhhc-cCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCEE
Q 003758 119 WDYAVAMHDVGPLLIKYARRN-SVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIV 195 (797)
Q Consensus 119 Kn~~lLLkAl~~Ll~e~~~lk-~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV~ 195 (797)
.+++.+++++...+ .... ....+-.+-++.+.....-...++.+.+.+|+.. ++.+.| ..+++.. +..|.+-
T Consensus 183 ~G~~~a~~al~~~~---~~~~~~~~~~~~VNIlG~~~~~gD~~eikrlL~~~Gi~v-~~~~~gg~t~~ei~~-~~~A~~n 257 (533)
T 1mio_A 183 AGHHIANNTVMTDI---IGKGNKEQKKYSINVLGEYNIGGDAWEMDRVLEKIGYHV-NATLTGDATYEKVQN-ADKADLN 257 (533)
T ss_dssp HHHHHHHHHHHHHT---TBCCCCCCCTTEEEEEEECCBTSHHHHHHHHHHHHTCEE-EEEEETTCCHHHHHB-TTSCSEE
T ss_pred HHHHHHHHHHHHHh---cccccCCCCCCeEEEEcCCCChhhHHHHHHHHHHCCCeE-EEEeCCCCCHHHHHh-hhcCCEE
Confidence 46777777765432 2111 0111223223333211222478899999999986 556665 3445544 4445555
Q ss_pred EEccCCCCCCccHHHHHHHH--hCCcEEEcCCCChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHhCc
Q 003758 196 LYGSSQVEQGFPSLIVRAMT--FGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNG 260 (797)
Q Consensus 196 V~PS~~Ee~GFPlvLLEAMA--~G~PVIasd~gGi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLedp 260 (797)
|..+.. .+..+.+.|- +|+|.+..+.-|+ .+.+++.++|.+++.++
T Consensus 258 iv~~~~----~~~~~A~~Leer~GiP~i~~~piG~---------------~~T~~~Lr~ia~~~g~~ 305 (533)
T 1mio_A 258 LVQCHR----SINYIAEMMETKYGIPWIKCNFIGV---------------DGIVETLRDMAKCFDDP 305 (533)
T ss_dssp EESCHH----HHHHHHHHHHHHHCCCEEECCCSSH---------------HHHHHHHHHHHHHSCCH
T ss_pred EEECHH----HHHHHHHHHHHHhCCCeEEecCCCH---------------HHHHHHHHHHHHHhCCC
Confidence 553322 2466778875 7999998652233 24666777777777653
No 194
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=22.18 E-value=1.6e+02 Score=30.57 Aligned_cols=56 Identities=13% Similarity=0.268 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCCCeEEEecChhhHHHHHH--HcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 160 DALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 160 e~Leela~elgL~d~~V~flG~~edl~~~L~--aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+..++.+++.+.+. + . .++.+++. ..|+++..+... .-.-.+.+|+..|++|++-.
T Consensus 40 ~~a~~~a~~~~~~~--~--~---~~~~~ll~~~~vD~V~i~tp~~--~H~~~~~~al~~GkhVl~EK 97 (334)
T 3ohs_X 40 SRAKEFAQKHDIPK--A--Y---GSYEELAKDPNVEVAYVGTQHP--QHKAAVMLCLAAGKAVLCEK 97 (334)
T ss_dssp HHHHHHHHHHTCSC--E--E---SSHHHHHHCTTCCEEEECCCGG--GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCCc--c--c---CCHHHHhcCCCCCEEEECCCcH--HHHHHHHHHHhcCCEEEEEC
Confidence 67777888888753 2 2 36677777 589998866443 33456788999999999754
No 195
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=22.05 E-value=86 Score=30.33 Aligned_cols=69 Identities=17% Similarity=0.129 Sum_probs=40.6
Q ss_pred HHHHHcCEEEEcc-CCC-CCCccHHHHHHHHhCCcEEEcCCC----Chh--H-------hhhc-------------CCeE
Q 003758 187 GVLLMADIVLYGS-SQV-EQGFPSLIVRAMTFGIPVITPDFP----IIK--E-------YVAE-------------GAQV 238 (797)
Q Consensus 187 ~~L~aADV~V~PS-~~E-e~GFPlvLLEAMA~G~PVIasd~g----Gi~--E-------iI~D-------------g~nG 238 (797)
..+..||++|.-- -.+ ..|...-+-=|.+.|+|||+-... |.. + +.++ -.+|
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~g 144 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLNG 144 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTTE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhCC
Confidence 4589999988621 111 013333444478999999975332 111 1 1111 0268
Q ss_pred EEEcCCCHHHHHHHHHHHH
Q 003758 239 IFFQKDNPEGLSRAFSLFI 257 (797)
Q Consensus 239 ~Lfd~~D~eeLAeaI~~LL 257 (797)
.++ .+.++|.++|...+
T Consensus 145 ~~~--~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 145 RVV--SSEEDLLEEIKQRL 161 (162)
T ss_dssp EEE--SSHHHHHHHHHHTC
T ss_pred eEE--eCHHHHHHHHHHHh
Confidence 888 57888998887764
No 196
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=21.92 E-value=1.8e+02 Score=30.00 Aligned_cols=68 Identities=9% Similarity=0.045 Sum_probs=41.0
Q ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEE
Q 003758 143 GSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT 222 (797)
Q Consensus 143 pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIa 222 (797)
++++++.++...+ +..++.+++.+.+ .....+++ -..+|+++..+... ...-.+..|+..|++|++
T Consensus 29 ~~~~lvav~d~~~----~~~~~~~~~~g~~-----~~~~~~~l---~~~~D~V~i~tp~~--~h~~~~~~al~~G~~v~~ 94 (319)
T 1tlt_A 29 SDWTLQGAWSPTR----AKALPICESWRIP-----YADSLSSL---AASCDAVFVHSSTA--SHFDVVSTLLNAGVHVCV 94 (319)
T ss_dssp SSEEEEEEECSSC----TTHHHHHHHHTCC-----BCSSHHHH---HTTCSEEEECSCTT--HHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEEECCCH----HHHHHHHHHcCCC-----ccCcHHHh---hcCCCEEEEeCCch--hHHHHHHHHHHcCCeEEE
Confidence 5677433554443 3445556666643 23333333 46789999876543 344567789999999987
Q ss_pred cC
Q 003758 223 PD 224 (797)
Q Consensus 223 sd 224 (797)
-.
T Consensus 95 eK 96 (319)
T 1tlt_A 95 DK 96 (319)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 197
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=21.47 E-value=48 Score=27.91 Aligned_cols=106 Identities=14% Similarity=0.088 Sum_probs=61.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHH---hCCcEEE
Q 003758 148 VFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMT---FGIPVIT 222 (797)
Q Consensus 148 LIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA---~G~PVIa 222 (797)
++++.+.+.. ...+.......|.. |.......+....+.. .|++++-..... .-|..+++.+. .++|||.
T Consensus 6 ilivdd~~~~-~~~l~~~l~~~~~~---v~~~~~~~~~~~~~~~~~~dlvi~d~~~~~-~~g~~~~~~l~~~~~~~~ii~ 80 (124)
T 1dc7_A 6 VWVVDDDSSI-RWVLERALAGAGLT---CTTFENGNEVLAALASKTPDVLLSDIRMPG-MDGLALLKQIKQRHPMLPVII 80 (124)
T ss_dssp CEEECSSSSH-HHHHHHHHTTTTCC---CEECCCTTHHHHHSSSCCCSCEEECSCSSH-HHHCSTHHHHHHHCTTSCCCC
T ss_pred EEEEeCCHHH-HHHHHHHHHhCCcE---EEEeCCHHHHHHHHhcCCCCEEEEeeecCC-CCHHHHHHHHHhhCCCCCEEE
Confidence 3566655542 35555555554543 4555555555555543 577776322210 11223344443 4578765
Q ss_pred cC-CC---ChhHhhhcCCeEEEEcCCCHHHHHHHHHHHHh
Q 003758 223 PD-FP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 258 (797)
Q Consensus 223 sd-~g---Gi~EiI~Dg~nG~Lfd~~D~eeLAeaI~~LLe 258 (797)
-. .. ...+.+..|..+++..|-++++|..++..++.
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 120 (124)
T 1dc7_A 81 MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS 120 (124)
T ss_dssp BCCSTTSTTTTSSCTTCCCCCBCSSCCHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHhcCcceEeeCCCCHHHHHHHHHHHHH
Confidence 32 22 34445566778899999999999999988764
No 198
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=21.16 E-value=1.9e+02 Score=30.69 Aligned_cols=56 Identities=16% Similarity=0.299 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCCCeEEEecChhhHHHHHHH--cCEEEEccCCCCCCccHHHHHHHHhCCcEEEcC
Q 003758 160 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLM--ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 224 (797)
Q Consensus 160 e~Leela~elgL~d~~V~flG~~edl~~~L~a--ADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd 224 (797)
+..++.+++++.+. .. .++.+++.. .|+++..+... .-.-.+.+|+..|++|++-.
T Consensus 57 ~~a~~~a~~~~~~~----~~---~~~~~ll~~~~iD~V~i~tp~~--~h~~~~~~al~~Gk~V~~EK 114 (383)
T 3oqb_A 57 EKVEALAKRFNIAR----WT---TDLDAALADKNDTMFFDAATTQ--ARPGLLTQAINAGKHVYCEK 114 (383)
T ss_dssp HHHHHHHHHTTCCC----EE---SCHHHHHHCSSCCEEEECSCSS--SSHHHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHHhCCCc----cc---CCHHHHhcCCCCCEEEECCCch--HHHHHHHHHHHCCCeEEEcC
Confidence 67788888887753 12 366777766 78888766544 44567789999999999743
Done!