Query 003762
Match_columns 797
No_of_seqs 317 out of 1942
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 03:14:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003762.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003762hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x9na1 a.235.1.1 (A:262-533) 100.0 8E-51 5.9E-55 428.8 23.9 256 170-425 5-272 (272)
2 d1x9na3 d.142.2.1 (A:534-753) 100.0 3.1E-49 2.3E-53 403.8 22.8 220 426-645 1-220 (220)
3 d1a0ia2 d.142.2.1 (A:2-240) AT 100.0 3.9E-33 2.9E-37 285.6 14.0 203 430-638 6-239 (239)
4 d1x9na2 b.40.4.6 (A:754-901) D 100.0 4.8E-32 3.5E-36 260.9 14.0 135 646-780 1-137 (148)
5 d1fvia2 d.142.2.1 (A:2-189) AT 100.0 1.6E-30 1.1E-34 257.9 14.6 176 432-639 3-188 (188)
6 d1p16a2 d.142.2.3 (A:1-245) mR 99.8 3.1E-21 2.2E-25 197.8 6.7 159 453-639 60-244 (245)
7 d1ckma2 d.142.2.3 (A:11-238) R 99.8 1.5E-19 1.1E-23 184.2 12.9 154 452-639 64-227 (228)
8 d1s68a_ d.142.2.4 (A:) RNA lig 99.4 4E-13 2.9E-17 136.1 9.5 172 450-641 25-230 (233)
9 d1a0ia1 b.40.4.6 (A:241-349) A 98.9 2.5E-09 1.8E-13 93.4 8.5 101 647-771 3-109 (109)
10 d1fvia1 b.40.4.6 (A:190-293) A 98.7 2.3E-08 1.7E-12 89.0 8.6 80 648-771 3-104 (104)
11 d1b04a_ d.142.2.2 (A:) Adenyla 97.8 9.2E-05 6.7E-09 77.2 14.3 153 451-619 104-286 (312)
12 d1ta8a_ d.142.2.2 (A:) Adenyla 97.3 0.00024 1.7E-08 73.8 8.8 152 452-619 108-289 (313)
13 d1dgsa3 d.142.2.2 (A:1-314) Ad 97.2 0.0003 2.2E-08 73.3 9.1 171 434-619 81-290 (314)
14 d1xdna_ d.142.2.4 (A:) RNA edi 97.0 0.0013 9.3E-08 66.0 10.8 180 450-640 26-260 (265)
15 d1x9na1 a.235.1.1 (A:262-533) 94.7 0.035 2.5E-06 56.2 8.6 94 300-413 23-126 (272)
16 d1xxxa1 c.1.10.1 (A:5-300) Dih 61.0 8.2 0.00059 37.8 7.7 58 562-619 54-111 (296)
17 d1xkya1 c.1.10.1 (A:1-292) Dih 56.4 9.1 0.00067 37.2 7.1 65 555-619 41-107 (292)
18 d1f74a_ c.1.10.1 (A:) N-acetyl 52.5 9.6 0.0007 37.1 6.5 65 555-619 42-108 (293)
19 d1o5ka_ c.1.10.1 (A:) Dihydrod 45.8 12 0.00085 36.3 5.9 58 562-619 48-105 (295)
20 d1hl2a_ c.1.10.1 (A:) N-acetyl 45.1 14 0.001 35.9 6.3 65 555-619 40-106 (295)
21 d2a6na1 c.1.10.1 (A:1-292) Dih 37.5 14 0.00099 35.9 4.8 58 562-619 48-105 (292)
No 1
>d1x9na1 a.235.1.1 (A:262-533) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=8e-51 Score=428.76 Aligned_cols=256 Identities=39% Similarity=0.687 Sum_probs=230.6
Q ss_pred cccCCCCCCCcccccccCCCccchHHHHHHHHHHHhccchHHHHHHHHHHHHhhhcCCCCchHHHHHHHhCccCCCcccc
Q 003762 170 LKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249 (797)
Q Consensus 170 ~~~~~~~~~p~~~~~~~~~~~~~F~~la~~~e~I~~tssR~~k~~iL~~~fr~~i~~~p~dl~~~vyL~~~~l~P~~e~~ 249 (797)
++..-..|+|.+.+||..|+++||..||++|++|++|++|++|+++|++||+++++.+|+|+.++|||++|+|+|+|++.
T Consensus 5 ~~p~~~~~~p~~~~~w~~~~~vpf~~la~~f~~ie~ts~rl~k~~iL~~~f~~~~~~~p~dl~~~vyL~~g~l~P~~e~~ 84 (272)
T d1x9na1 5 YNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGL 84 (272)
T ss_dssp CCTTCSSCCHHHHCCSCTTSCCBHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHTCSSCGGGCC
T ss_pred CCcccccCCcchhhcccCCCCcCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHhCCcCcchhch
Confidence 34445579999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHhCCCHHHHHHHHHhcCCHHHHHhhccccCCCCCCCCCCCHHHHHHHHHHHHHHhCCChHHHHHH
Q 003762 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKN 329 (797)
Q Consensus 250 elGIge~~L~kal~~a~G~s~~~ik~~y~~~GDlg~vA~~~r~~q~~l~~~~~LTI~eV~~~L~kIA~~~G~~s~~~K~~ 329 (797)
+||||++.|+|+|++++|++++.+++.|+++||+|+||+.++++|.+++.+++|||.+|++.|++||..+|++|+++|++
T Consensus 85 elgige~~l~kai~e~~G~~~~~i~~~~~~~GDlG~va~~~~~~~~~~~~~~~LTv~~V~~~L~~IA~~sG~~s~~~K~~ 164 (272)
T d1x9na1 85 ELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKID 164 (272)
T ss_dssp CCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHTCHHHHTCC--------CCCSCCBHHHHHHHHHHHHHCCSTTHHHHHHH
T ss_pred hcccCHHHHHHHHHHHHCcCHHHHHHHHHHcCCHHHHHHHHhhccccccCCCCCCHHHHHHHHHHHHHhhCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999888888888999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHhhhccCcccHHHHHHHHHHhhccCCCCCCC-C-----------CCCcchHHHHHHHHHH
Q 003762 330 RIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP-P-----------PNIQSPLEEAAKIVKQ 397 (797)
Q Consensus 330 ~L~~LL~~~t~~E~k~LiRiIlkdLRiGi~e~tvl~Ala~a~~~~~~~~~~-~-----------~~l~~~l~~a~~~vk~ 397 (797)
+|..||.+|++.|++||+|+|+++||||++++||+.||++||.++...... + ..+.+.++++..+|++
T Consensus 165 ~i~~Ll~~~~~~E~kyliR~l~g~LRIGv~e~tvl~ALa~Af~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~vk~ 244 (272)
T d1x9na1 165 IIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQ 244 (272)
T ss_dssp HHHHHHHHCCSTHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHHSCTTCCSSCSCSCTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHhcCcccccccchhhhhhhccchhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999877542211 0 1234668888899999
Q ss_pred HhhcCCchhhhHhhhhhcCccccCCccc
Q 003762 398 VFSVLPVYEKIVPALLTDGVWNLSNTCS 425 (797)
Q Consensus 398 ~y~~~pd~~~v~~~l~~~g~~~l~~~~~ 425 (797)
+|++||||+.|+++++++|+++|.++|+
T Consensus 245 ay~~~P~~~~iv~~ll~~gi~~l~~~ck 272 (272)
T d1x9na1 245 TFCEVPDLDRIIPVLLEHGLERLPEHCK 272 (272)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHHTGGGCC
T ss_pred HhhhCCCHHHHHHHHHHhCHHHHHhhcC
Confidence 9999999999999999999999988874
No 2
>d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.1e-49 Score=403.81 Aligned_cols=220 Identities=56% Similarity=1.018 Sum_probs=201.1
Q ss_pred cCCCCCCccccccccCChHHHHhhcCCCceEEEeecceEEEEEEEecCCeEEEEecCCCccCCCcchHHHHHHhhcCCCC
Q 003762 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSV 505 (797)
Q Consensus 426 l~~g~Pv~PMLA~~~~~i~~~l~k~~g~~~~~E~KyDG~R~qih~~~~g~V~ifSR~gkd~T~~yPel~~~l~~~~~~~v 505 (797)
|+||+|++||||++..++++.++++++.+|++|+||||+|||+|+..+|+|++|||+|+++|..||++.+.+.+...++.
T Consensus 1 ~~pg~P~~PMLA~~~~~~~~~~~~~~~~~~~~e~K~DG~R~~i~~~~~~~v~l~SR~g~~~t~~~p~l~~~~~~~~~~~~ 80 (220)
T d1x9na3 1 LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSV 80 (220)
T ss_dssp CCTTSCCCCCEEEEESSHHHHHHHTTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSCBCTTTCHHHHHTSGGGBCTTC
T ss_pred CCCCCCCCCeeCCCCCChHHHHhhcCCCcEEEEEeECcEEEEEEEECCCEEEEEeCCCccccccchhHHHHHHHhhcCCC
Confidence 68999999999999999999999999889999999999999999877889999999999999999999988887766666
Q ss_pred CCeEEEEEEEEEecCCCcccChhhHHhhhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccCCCcE
Q 003762 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585 (797)
Q Consensus 506 ~~~ILDGElVa~d~~~g~~lpFq~L~~R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~~~~i 585 (797)
.++|||||+|+||.+.+.+.+|+.++++.++.........+++|+|||||++||+++++.||.+|+++|++++.+.++.+
T Consensus 81 ~~~iLDGEl~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vFDil~~~g~~~~~~p~~eR~~~L~~~~~~~~~~~ 160 (220)
T d1x9na3 81 TSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEF 160 (220)
T ss_dssp CCEEEEEEEEEECTTTCSBCCHHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBTTTE
T ss_pred cceeeeeeeEEecCCCCccchHHHHhhhhhcccchhhhccccceEEEEEEEECCcchhhhhHHHHHHHHHHHhccCCCeE
Confidence 89999999999998877788899988887776555555678999999999999999999999999999999999888889
Q ss_pred EEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeCCCCCCccCCCCCCCeEEEcccccccc
Q 003762 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645 (797)
Q Consensus 586 ~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~~~ds~Y~pGkRs~~WlKlK~dY~~~~ 645 (797)
.+++...+++.+++.++|++++++|+||||+|+.+.+|+|++|+|+.+|+|+|+||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~g~EGim~K~~~~~s~Y~~GkRs~~w~K~K~ey~d~v 220 (220)
T d1x9na3 161 VFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGV 220 (220)
T ss_dssp EECCEECCCCHHHHHHHHHHHHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHHHHHSS
T ss_pred EEEEeeccCCHHHHHHHHHHHHHCCCceEEEeccCCCCCeecCCcCCCeEEEcccccCcC
Confidence 999999999999999999999999999999996544999999999999999999998653
No 3
>d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]}
Probab=99.98 E-value=3.9e-33 Score=285.58 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=151.2
Q ss_pred CCCccccccccCChHHHHhhcCCCceEEEeecceEEEEEEEecCCeEEEEecCCCccCC------CcchHHHHHHhhcCC
Q 003762 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG------KFPDVVLAVSRLKKP 503 (797)
Q Consensus 430 ~Pv~PMLA~~~~~i~~~l~k~~g~~~~~E~KyDG~R~qih~~~~g~V~ifSR~gkd~T~------~yPel~~~l~~~~~~ 503 (797)
.||+||.... ..+.++++..+ .|++|+||||+|||+|++++|.+.+|||+|+++++ .++.+.+.+......
T Consensus 6 ~p~~~~~~~e-~~~~~~~~~~~--~~~~E~K~DG~R~~~~~~~~~~~~~~SR~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (239)
T d1a0ia2 6 NPFKAVSFVE-SAIKKALDNAG--YLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRLLNDDRCF 82 (239)
T ss_dssp CCEEEEECCH-HHHHHHHHHHS--SEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHHHHHSTTCC
T ss_pred CCccCcCccH-hHHHHhhccCC--CEEEEEeeceEEEEEEEECCeEEEEEecCCCcccchhhhhhhhhhHHHHHHHHhhc
Confidence 5677775532 23455555432 69999999999999999877788899999999864 234555555554433
Q ss_pred CCCCeEEEEEEEEEec---------------CCCcccChhhHHhhhcccCCc--cccccceEEEEeeeeecCC------c
Q 003762 504 SVRSFVLDCEIVAYDR---------------EKQKILPFQTLSTRARKNVSL--SDIKVDVCIYAFDILYRNG------Q 560 (797)
Q Consensus 504 ~v~~~ILDGElVa~d~---------------~~g~~lpFq~L~~R~Rk~~~~--~~~~~~v~~~vFDILylnG------~ 560 (797)
..++||||||+|+++. ..+...+|+.++.|.++.... .....+++|++||++++++ .
T Consensus 83 ~~~~~vLDGEl~~~~~~f~~~~~~v~~~~~~~~~~~~~f~~l~~r~~~~~~~~~~~~~~~l~~~vfD~l~l~~~~~~~~~ 162 (239)
T d1a0ia2 83 YKDGFMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDC 162 (239)
T ss_dssp CTTEEEEEEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCE
T ss_pred CCcceEEeeeEeeccCCcccchhhhhhcccccccccCCHHHHHhhhccCccchhhhhcccceEEEEEEeeccccccccch
Confidence 4478999999999753 334567899999887765332 2235789999999999864 3
Q ss_pred cccCCcHHHHHHHHHHhhccC--CCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeCCCCCCccCCCCCCCeEEEc
Q 003762 561 PLLQEQLRVRREHLYDSFEEE--PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638 (797)
Q Consensus 561 ~L~~~Pl~ERr~lL~~l~~~~--~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~~~ds~Y~pGkRs~~WlKlK 638 (797)
.+...++.+|++.|...+.+. +..+.+++...+++.+++.++|+++++.|+||||+|++ +|+|++|+| .+|+|+|
T Consensus 163 ~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~g~EGlmiK~~--~s~Y~~GR~-~~w~K~K 239 (239)
T d1a0ia2 163 DVMTLLMQEHVKNMLPLLQEYFPEIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKDP--MCIYKRGKK-SGWWKMK 239 (239)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHCTTSEEEECCEEEESSHHHHHHHHHHHHTTTCCCEEEECT--TCEECSEEE-EEEEEES
T ss_pred hhccccHHHHHHHHHHHHhhcCCCccEEEeeeEecCCHHHHHHHHHHHHHCCCcEEEEeCC--CCccCCCCC-CCcEEeC
Confidence 567789999999888887653 34688888889999999999999999999999999999 999999854 5799998
No 4
>d1x9na2 b.40.4.6 (A:754-901) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=4.8e-32 Score=260.87 Aligned_cols=135 Identities=50% Similarity=0.900 Sum_probs=126.3
Q ss_pred CCccceEEEeEEeCCCCcCCccceEEEEEecCCCceEEEeccccCCCCHHHHHHHHHhhccccCCCCCCCcccCCCCCCc
Q 003762 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725 (797)
Q Consensus 646 ~dtlDlvVIGa~~G~Gkr~g~~gsfllg~~d~~~g~~~~vgkVGTGfSd~~l~~l~~~l~~~~~~~p~~~~~~~~~~~pd 725 (797)
|||+||||||+++|+|+|.|++|+||||+||+++|+|+++|+||||||++++++|.+.++++....++++........|+
T Consensus 1 gdtlDlVViG~~~g~G~r~~~~~slllg~~~~~~~~l~~vg~VgtGfs~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (148)
T d1x9na2 1 GDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPD 80 (148)
T ss_dssp CEEEEEEEEEEEEBCTTSBTSEEEEEEEEEETTTTEEEEEEEECCSCCHHHHHHHHHHHHHTEESSCCTTEECSSSCCCS
T ss_pred CCCEeEEEEeeEeCCCCCCCceeeEEEEEEcCCCCEEEEEEEEcCcChHHHHHHHHhhccccccCCCCcceeccCccCCc
Confidence 68999999999999999999999999999998889999999999999999999999999999888777776666667899
Q ss_pred eEeccceEEEEEeeeeecCCcccccccccCCCCCceeeeceEeeEeC--CcccccCC
Q 003762 726 VWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKVFTVRFSVLAHLSF--PLLFCLGN 780 (797)
Q Consensus 726 vw~eP~~V~EV~~~eit~S~~~~aa~g~v~~~~G~sLRFPRf~riR~--~~~~~~~~ 780 (797)
+||+|.+||||+|++||.|+.|+++.|.+..+.|++||||||+|||+ +|++|.+.
T Consensus 81 ~wv~P~~V~Ev~~~~it~s~~~~~~~~~~~~~~g~sLRfPr~~riR~DK~~~e~~t~ 137 (148)
T d1x9na2 81 HWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTS 137 (148)
T ss_dssp EEECSCCEEEEEESEEEEESSCCTTTTTSCSSCEEEEESCEEEEECTTCCGGGSCBH
T ss_pred EEeccceEEEEEeeeeeeccceeeccccccCCCceEEEcCEEEEEeCCCChHHCcCH
Confidence 99999999999999999999999999999988999999999999999 99999653
No 5
>d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.97 E-value=1.6e-30 Score=257.93 Aligned_cols=176 Identities=18% Similarity=0.231 Sum_probs=139.2
Q ss_pred CccccccccCChHHHHhhcCCCceEEEeecceEEEEEEEecCCeEEEEecCCCccCCCcchHHHHHHhhcCCCCCCeEEE
Q 003762 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511 (797)
Q Consensus 432 v~PMLA~~~~~i~~~l~k~~g~~~~~E~KyDG~R~qih~~~~g~V~ifSR~gkd~T~~yPel~~~l~~~~~~~v~~~ILD 511 (797)
++||||++.++++++ . .++++|+||||+|||.|+ ++|||+|+++|+.||.... ... ..++||
T Consensus 3 ~~PMLA~~~~~~~~~----~-~p~~~e~K~DG~R~~~~~------~l~SR~g~~~~~~~~~~~~--~~~-----~~~~lD 64 (188)
T d1fvia2 3 TKPLLAATLENIEDV----Q-FPCLATPKIAGIRSVKQT------QMLSRTFKPIRNSVMNRLL--TEL-----LPEGSD 64 (188)
T ss_dssp SSCCBCEECCCGGGC----C-SSEEEEECCCSEEEEESS------SEECTTSCBCSCHHHHHHH--HHH-----SCTTEE
T ss_pred CCcccCCcCCChhhc----C-CcEEEEeccccEeEEeEE------EEEecCCCccCCcChHHHH--hhC-----cccccc
Confidence 589999999887653 2 368999999999998653 5999999999998876432 222 357799
Q ss_pred EEEEEEecCCCcccChhhHHhhhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccCCC-----cEE
Q 003762 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG-----FFQ 586 (797)
Q Consensus 512 GElVa~d~~~g~~lpFq~L~~R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~~~-----~i~ 586 (797)
||+++++ .+|+.++++.++... .....++|++||+++.++ ..||.+|++.|++++...+. .+.
T Consensus 65 GEl~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~vfD~~~~~~----~~~~~~r~~~l~~~l~~~~~~~~~~~~~ 132 (188)
T d1fvia2 65 GEISIEG------ATFQDTTSAVMTGHK--MYNAKFSYYWFDYVTDDP----LKKYIDRVEDMKNYITVHPHILEHAQVK 132 (188)
T ss_dssp EEEECTT------SCHHHHHHHHHSCC------CCEEEEEEEECSSCT----TSCHHHHHHHHHHHHHHCGGGGGCSSEE
T ss_pred ceeeccC------CchhhhHHHHhhccc--ccccccEEEEEEEecCcc----cccHHHHHHHHHHHHHhcccccccCceE
Confidence 9999974 379999888766532 235679999999998765 57999999999998776432 233
Q ss_pred E--EeEEecCCHHHHHHHHHHHHHcCCceeEEEeCCCCCCccCCCCC---CCeEEEcc
Q 003762 587 F--ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS---LNWLKLKK 639 (797)
Q Consensus 587 ~--v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~~~ds~Y~pGkRs---~~WlKlK~ 639 (797)
+ +....+++.+++.++|++++++|+||||+|++ +|+|++|+|+ ++|+|+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~G~EGlmiK~~--ds~Y~~gr~s~r~~~~lK~Kr 188 (188)
T d1fvia2 133 IIPLIPVEINNITELLQYERDVLSKGFEGVMIRKP--DGKYKFGRSTLKEGILLKMKQ 188 (188)
T ss_dssp EEECCCEEECSHHHHHHHHHHHHHTTCCSEEEECT--TCCCCSSBCCTTTTSSEEECC
T ss_pred EEeeeeEecCCHHHHHHHHHHHHHCCCcEEEEECC--CCccCCCCcCCCCCceEEEeC
Confidence 3 34566889999999999999999999999999 9999999765 57999995
No 6
>d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=99.82 E-value=3.1e-21 Score=197.83 Aligned_cols=159 Identities=23% Similarity=0.244 Sum_probs=110.5
Q ss_pred CceEEEeecceEEEEEEEec----CCeEEEEecCCCccCC---CcchHHHHHHhhcCCCCCCeEEEEEEEEEecCCCccc
Q 003762 453 MEFTCEYKYDGERAQIHYLE----DGSVEIYSRNAERNTG---KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL 525 (797)
Q Consensus 453 ~~~~~E~KyDG~R~qih~~~----~g~V~ifSR~gkd~T~---~yPel~~~l~~~~~~~v~~~ILDGElVa~d~~~g~~l 525 (797)
.+|+|++|+||+|+|+|+.. .+.+.+++|+++.+.. .+|..... .........+.+||||++..+...+
T Consensus 60 ~~Y~v~eK~DG~R~lL~i~~~~~~~~~~~li~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~~tilDGElv~~~~~~~--- 135 (245)
T d1p16a2 60 KDYFVCEKTDGLRCLLFLINDPDKGEGVFLVTRENDYYFIPNIHFPLSVNE-TREKPTYHHGTLLDGELVLENRNVS--- 135 (245)
T ss_dssp SCEEEEEEECSEEEEEEEEEETTTEEEEEEEETTCCEEECCSCCCCSCTTC-CSSSCCCCSSEEEEEEEEEECCSSS---
T ss_pred CCEEEEECcCCeEEEEEEEEcCCCceEEEEEeCCCCeEEcccccccccccc-ccccccccCCeeEEEEEEeecccCC---
Confidence 47999999999999999852 3468999999986421 23322110 0011123467899999998643221
Q ss_pred ChhhHHhhhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccC-----------------CCcEEEE
Q 003762 526 PFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE-----------------PGFFQFA 588 (797)
Q Consensus 526 pFq~L~~R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~-----------------~~~i~~v 588 (797)
+..++|++||+++++|+++.+.||.+|++.|++.+... +-.+.+-
T Consensus 136 ------------------~~~~~~~ifDil~~~g~~l~~~~l~~R~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k 197 (245)
T d1p16a2 136 ------------------EPVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKKHNPDIVNSPEFPFKVGFK 197 (245)
T ss_dssp ------------------CCEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHTHHHHHHHHHHCHHHHSCTTSCCEEEEC
T ss_pred ------------------cceEEEEEeeehhhCCceeeeccHHHHHHHHHHHHHHhhhhhhhcccccccchhhhhhhhhh
Confidence 34579999999999999999999999999998865321 0112222
Q ss_pred eEEecCCHHHHHHHHHHH--HHcCCceeEEEeCCCCCCccCCCCCCCeEEEcc
Q 003762 589 TTLTSIDLDEIQKFLDAA--VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKK 639 (797)
Q Consensus 589 ~~~~~~~~eei~~~f~~a--i~~g~EGlmvK~~~~ds~Y~pGkRs~~WlKlK~ 639 (797)
..... +++.++++.. +.++.||||++.. +++|.+| |+..|+||||
T Consensus 198 ~~~~~---~~~~~l~~~~~~~~~~~DGLIf~p~--~~pY~~G-r~~~~lKWKP 244 (245)
T d1p16a2 198 TMLTS---YHADDVLSKMDKLFHASDGLIYTCA--ETPYVFG-TDQTLLKWKP 244 (245)
T ss_dssp CCEEG---GGTHHHHTTGGGCSSCEEEEEEEES--SSCCCSE-EEEEEEEECC
T ss_pred hhhhH---HHHHHHHHHhhhcCCCCCeEEEEcC--CCCEeCC-CCCCeEEeCC
Confidence 22223 3444444433 3568899999999 9999988 6778999998
No 7
>d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.79 E-value=1.5e-19 Score=184.20 Aligned_cols=154 Identities=19% Similarity=0.198 Sum_probs=121.5
Q ss_pred CCceEEEeecceEEEEEEEecC---CeEEEEecCCCccCCCcchHHHHHHhhcCCCCCCeEEEEEEEEEecCCCcccChh
Q 003762 452 DMEFTCEYKYDGERAQIHYLED---GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528 (797)
Q Consensus 452 g~~~~~E~KyDG~R~qih~~~~---g~V~ifSR~gkd~T~~yPel~~~l~~~~~~~v~~~ILDGElVa~d~~~g~~lpFq 528 (797)
..+|++++|+||+|+++++... +.+.+++|++..+...+..+.. . ...+.|||||++..+..
T Consensus 64 ~~~Y~vseK~DG~R~ll~~~~~~~~~~~~li~r~~~~~~~~~~~~~~---~----~~~~ti~DGEli~~~~~-------- 128 (228)
T d1ckma2 64 QNKYVVSEKTDGIRFMMFFTRVFGFKVCTIIDRAMTVYLLPFKNIPR---V----LFQGSIFDGELCVDIVE-------- 128 (228)
T ss_dssp HSCEEEEEEECSEEEEEEEEEETTEEEEEEECTTCCEEECCCSCCCT---T----GGGCEEEEEEEEEETTT--------
T ss_pred cCCeEEEEeecCEEEEEEEEecCCceEEEEEeCCCceEEcccccCch---h----hcCCceEeEEEEeeccc--------
Confidence 3479999999999999998532 4588999999886543322211 1 12579999999986421
Q ss_pred hHHhhhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccCCC------cEEEEeEEecCCHHHHHHH
Q 003762 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG------FFQFATTLTSIDLDEIQKF 602 (797)
Q Consensus 529 ~L~~R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~~~------~i~~v~~~~~~~~eei~~~ 602 (797)
...+|++||+++++|+++.+.||.+|++.|++++.+... .++..+.....+.+.+.+.
T Consensus 129 ----------------~~~~f~ifD~l~~~g~~~~~~pf~~Rl~~L~~~l~~~~~~~~~~~~i~~k~~~~~~~~~~l~~~ 192 (228)
T d1ckma2 129 ----------------KKFAFVLFDAVVVSGVTVSQMDLASRFFAMKRSLKEFKNVPEDPAILRYKEWIPLEHPTIIKDH 192 (228)
T ss_dssp ----------------TEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHHTTCCCCTTSSSEEEECCCEETTCHHHHHHH
T ss_pred ----------------ccceEEEeeEEEEcCcchhcCChHHHHHHHHHHHhhhhccccCceeEEeeeeeehhhHHHHHHH
Confidence 235799999999999999999999999999999876432 4566666677788888777
Q ss_pred HHH-HHHcCCceeEEEeCCCCCCccCCCCCCCeEEEcc
Q 003762 603 LDA-AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKK 639 (797)
Q Consensus 603 f~~-ai~~g~EGlmvK~~~~ds~Y~pGkRs~~WlKlK~ 639 (797)
++. ....+.||||++.. +++|.+| |+..|+||||
T Consensus 193 ~~~~~~~y~~DGLIf~p~--~~pY~~G-r~~~~~KWKP 227 (228)
T d1ckma2 193 LKKANAIYHTDGLIIMSV--DEPVIYG-RNFNLFKLKP 227 (228)
T ss_dssp HHHHHHHSCEEEEEEEES--SSCCCCE-EEEEEEEECS
T ss_pred HhhhccCCCCceEEEEeC--CCCEeCC-CCCCeEEeCC
Confidence 754 56789999999999 9999988 7788999998
No 8
>d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=99.37 E-value=4e-13 Score=136.10 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=100.5
Q ss_pred cCCCceEEEeecceEEEEEEEecCCeEEEEecCCC--ccCCCcc------hHHHHHHhhcCCCCCCeEEEEEEEE-EecC
Q 003762 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE--RNTGKFP------DVVLAVSRLKKPSVRSFVLDCEIVA-YDRE 520 (797)
Q Consensus 450 ~~g~~~~~E~KyDG~R~qih~~~~g~V~ifSR~gk--d~T~~yP------el~~~l~~~~~~~v~~~ILDGElVa-~d~~ 520 (797)
+.+.+|++|+|+||+|+++|++ +|+++++||++. +++..++ .+.+.+..++......+++|||+++ |.
T Consensus 25 ~~~~~~vveEKlDG~n~~l~~~-~~~~~~~SR~~~l~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~GE~~-- 101 (233)
T d1s68a_ 25 LTGGEWVAREKIHGTNFSLIIE-RDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFA-- 101 (233)
T ss_dssp CSCSCEEEEECCCSEEEEEEEE-SSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE--
T ss_pred cCCCeEEEEEeECCccEEEEEE-CCEEEEEecCCcccCCCccchhhhhhhHHHHHHHHHHhhhhhccCcceEEEeecc--
Confidence 5678999999999999999995 789999999995 3333221 2233333322212246789999987 22
Q ss_pred CCcccChhhHHhhhcccCCccccccceEEEEeeeeecC-CccccCCcHHHHHHHHHHh-hccCCCcEEE--EeE----Ee
Q 003762 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRN-GQPLLQEQLRVRREHLYDS-FEEEPGFFQF--ATT----LT 592 (797)
Q Consensus 521 ~g~~lpFq~L~~R~Rk~~~~~~~~~~v~~~vFDILyln-G~~L~~~Pl~ERr~lL~~l-~~~~~~~i~~--v~~----~~ 592 (797)
|... .++. ...+..|++||+...+ +....-+++.++..+++.. +..+|-..+. .+. ..
T Consensus 102 -g~~i---------q~~~----~~~~~~f~~Fdv~~~~~~~~~~fl~~d~~~~~~~~~gl~~vP~l~rg~~~~~~~~~~~ 167 (233)
T d1s68a_ 102 -GPGI---------QKNV----DYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFEELIKLPND 167 (233)
T ss_dssp -STTT---------SSSC----CCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHHTCEESCEEEEECHHHHTTSCTT
T ss_pred -cCCc---------cccc----cccccceEEEEEEEeccCCccceecHHHHHHHHhcCCCCcCCeEEEecHHHhhccccc
Confidence 1000 0111 1234578999998653 3334456888888888775 2222211000 000 00
Q ss_pred cCC-HH--HHHHHHH--------------HHHHcCCceeEEEeCCCCCCccCCCCCCCeEEEcccc
Q 003762 593 SID-LD--EIQKFLD--------------AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641 (797)
Q Consensus 593 ~~~-~e--ei~~~f~--------------~ai~~g~EGlmvK~~~~ds~Y~pGkRs~~WlKlK~dY 641 (797)
..+ .. ...+... .+++...||||+|+. ++.|.++ |+..|+|+|...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EGiVlK~~--~~~~~~~-~~r~~~K~k~~~ 230 (233)
T d1s68a_ 168 LDSVVQDYNFTVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPC--YPSWLRN-GNRVAIKCKNSK 230 (233)
T ss_dssp CBCCHHHHHHHHHHHCHHHHHHCCCCCCCCCSSCBCCEEEEEES--SCCBCTT-SCBSCEEEECGG
T ss_pred cchhhhhhcccccccchhhhhcccchhhcccccCccCEEEEEeC--CCCEecC-CCceEEEEeccc
Confidence 000 00 0001000 122355799999999 9999875 688999999753
No 9
>d1a0ia1 b.40.4.6 (A:241-349) ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 10760]}
Probab=98.86 E-value=2.5e-09 Score=93.39 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=69.4
Q ss_pred CccceEEEeEEeCC-CC-cCCccceEEEEEecCCCceEEEeccccCCCCHHHHHHHHHhhccccCCCCCCC--cccCCCC
Q 003762 647 DSLDLVPIAAFHGR-GK-RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY--YRFADTI 722 (797)
Q Consensus 647 dtlDlvVIGa~~G~-Gk-r~g~~gsfllg~~d~~~g~~~~vgkVGTGfSd~~l~~l~~~l~~~~~~~p~~~--~~~~~~~ 722 (797)
+++|..|||..||+ |+ ..|++..|.+-+.| |..+ .++|+|++.+++|++..+.+....-..+ +.++...
T Consensus 3 ~~aDG~Vvg~~wGt~G~ANeGkViGf~VlLE~---G~vV----~A~gis~~lmdefT~~v~~~~~~~~~~~~~~~~~d~~ 75 (109)
T d1a0ia1 3 NEADGIIQGLVWGTKGLANEGKVIGFEVLLES---GRLV----NATNISRALMDEFTETVKEATLSQWGFFSPYGIGDND 75 (109)
T ss_dssp EEEEEEEEEEECCCTTTSSCSSCCEEEEECTT---SCEE----EEBCCCSHHHHHHHHHHHHHHTTTSCCC--------C
T ss_pred ccccceEEeeecCCCCcccCccEEEEEEEecC---CcEE----eccccCHHHHHHHHHhhhhcccccccccccccccCcc
Confidence 58999999999998 75 67889999875443 6643 3689999999999988765432211111 1122111
Q ss_pred CCceEecc--ceEEEEEeeeeecCCcccccccccCCCCCceeeeceEeeEe
Q 003762 723 SPDVWFEP--TEVWEVKAADLTISPVHRAAIGVVDPDKVFTVRFSVLAHLS 771 (797)
Q Consensus 723 ~pdvw~eP--~~V~EV~~~eit~S~~~~aa~g~v~~~~G~sLRFPRf~riR 771 (797)
..-.+| ..+|||.|+|-|. ..|||||+|.+||
T Consensus 76 --~~~~~~y~G~~~eV~yME~tp---------------DGSLRHPsF~~fR 109 (109)
T d1a0ia1 76 --ACTINPYDGWACQISYMEETP---------------DGSLRHPSFVMFR 109 (109)
T ss_dssp --CCCCCTTTTCEEEEEESEECT---------------TSCEESCEEEEEC
T ss_pred --ccccccccceEEEEEEEeeCC---------------CCcccCCcccccC
Confidence 011123 4699999999885 4699999999998
No 10
>d1fvia1 b.40.4.6 (A:190-293) ATP-dependent DNA ligase {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=98.67 E-value=2.3e-08 Score=88.98 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=58.4
Q ss_pred ccceEEEeEEeCCC----------------------CcCCccceEEEEEecCCCceEEEeccccCCCCHHHHHHHHHhhc
Q 003762 648 SLDLVPIAAFHGRG----------------------KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705 (797)
Q Consensus 648 tlDlvVIGa~~G~G----------------------kr~g~~gsfllg~~d~~~g~~~~vgkVGTGfSd~~l~~l~~~l~ 705 (797)
+.+++|||+..|.| +..|++|+|+|- + +..+| +||+|||+++++++|+.-.
T Consensus 3 DaEa~vig~~e~~~n~n~~~~~~~g~~~r~~~~~~~~~~g~lG~~~~~--~-~G~~F----~vgsg~t~~~R~~lw~n~~ 75 (104)
T d1fvia1 3 DAEATIISMTALFKNTNTKTKDNFGYSKRSTHKSGKVEEDVMGSIEVD--Y-DGVVF----SIGTGFDADQRRDFWQNKE 75 (104)
T ss_dssp EEEEEEEEEEESCC-------------------CCCTTCCCEEEEEEC--S-TTCCE----EECSSCCHHHHHHHHHTHH
T ss_pred cceEEEEEEeecccccchhhhhhhccceeeeccccccCCCCEEEEEEe--c-CCCEE----EcCCCCCHHHHHHHHhccc
Confidence 67899999988743 247899999863 2 22344 7899999999999997643
Q ss_pred cccCCCCCCCcccCCCCCCceEeccceEEEEEeeeeecCCcccccccccCCCCCceeeeceEeeEe
Q 003762 706 SKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKVFTVRFSVLAHLS 771 (797)
Q Consensus 706 ~~~~~~p~~~~~~~~~~~pdvw~eP~~V~EV~~~eit~S~~~~aa~g~v~~~~G~sLRFPRf~riR 771 (797)
++. ..+++|+|.++|. ..++|||+|++||
T Consensus 76 ~~I----------------------Gk~vTvky~~~T~---------------~g~PRfP~f~~iR 104 (104)
T d1fvia1 76 SYI----------------------GKMVKFKYFEMGS---------------KDCPRFPVFIGIR 104 (104)
T ss_dssp HHT----------------------TCEEEEEEECC--------------------CEEEEEEEEC
T ss_pred ccC----------------------CcEEEEEEeccCC---------------CCCccCceEEEeC
Confidence 221 3489999999985 3589999999998
No 11
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.80 E-value=9.2e-05 Score=77.16 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=94.5
Q ss_pred CCCceEEEeecceEEEEEEEecCC-eEEEEecC----CCccCCCcchHHHHHHhhcCCCCCCeEEEEEEEEEecCCCccc
Q 003762 451 QDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRN----AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL 525 (797)
Q Consensus 451 ~g~~~~~E~KyDG~R~qih~~~~g-~V~ifSR~----gkd~T~~yPel~~~l~~~~~~~v~~~ILDGElVa~d~~~g~~l 525 (797)
....|++|+|+||.-+.+.+. +| -++++||. |+|+|+....+.. +...+. ....+.+.||++.-. .
T Consensus 104 ~~~~~~v~~KlDG~si~l~Y~-~G~l~~a~TRGdG~~GeDIT~~~~~i~~-iP~~~~-~~~~~~irGE~~~~~------~ 174 (312)
T d1b04a_ 104 GEAAYVCELAIDGLAVSVRYE-DGYFVQGATRGDGTTGEDITENLKTIRS-LPLRLK-EPVSLEARGEAFMPK------A 174 (312)
T ss_dssp SSCCEEEEEEESSEEEEEEEE-TTEEEEEEECTTSSCEEBCHHHHHTCTT-SCSBCS-SCCCEEEEEEEECCH------H
T ss_pred cccceeeeeeeecceeeeeec-ccceEEEeecCCcchhhhHHHHHhhhcC-CCCccC-CCcccccccceeeec------c
Confidence 345799999999999999985 55 48999997 8888764322110 111111 235789999999842 1
Q ss_pred ChhhHH-------------------hhhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccCCCcEE
Q 003762 526 PFQTLS-------------------TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586 (797)
Q Consensus 526 pFq~L~-------------------~R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~~~~i~ 586 (797)
.|..+- .-.|...........+.|+++.+.+..+ .......+..+.|..+--......
T Consensus 175 ~f~~~~~~~~~~~~~~f~NpRN~aAG~l~~k~~~~~~~~~l~~~~y~~~~~~~--~~~~~~~e~l~~L~~~gf~~~~~~- 251 (312)
T d1b04a_ 175 SFLRLNEERKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEA--LGIASHSEALDYLQALGFKVNPER- 251 (312)
T ss_dssp HHHHHHHHHHHC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTT--TTCCBHHHHHHHHHHTTCCCCTTC-
T ss_pred hhhhhhhhhhhccccccchhhHHhhcccccccchhhhhhhhhheeeecccccc--ccchhHHHHHHHHHhcCcccccce-
Confidence 233221 1111110001124578899998875443 334677888888988732222222
Q ss_pred EEeEEecCCHHHHHHHHHHHHHc----CC--ceeEEEeC
Q 003762 587 FATTLTSIDLDEIQKFLDAAVDA----SC--EGLIIKTM 619 (797)
Q Consensus 587 ~v~~~~~~~~eei~~~f~~ai~~----g~--EGlmvK~~ 619 (797)
..+.+.+++.+++++..+. .+ .|||+|.-
T Consensus 252 ----~~~~~~~~v~~~~~~~~~~R~~l~Y~iDGIVikvn 286 (312)
T d1b04a_ 252 ----RRCANIDEVIAFVSEWHDKRPQLPYEIDGIVIKVD 286 (312)
T ss_dssp ----EEESSHHHHHHHHHHHHHHSTTCSSCEEEEEEEEC
T ss_pred ----EEECCHHHHHHHHHHHHhhhhcCCCCCCeEEEEEc
Confidence 2356788999988887643 23 49999974
No 12
>d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]}
Probab=97.28 E-value=0.00024 Score=73.76 Aligned_cols=152 Identities=18% Similarity=0.167 Sum_probs=93.7
Q ss_pred CCceEEEeecceEEEEEEEecCCe-EEEEecC----CCccCCCcchHHHHHHhhcCCCCCCeEEEEEEEEEecCCCcccC
Q 003762 452 DMEFTCEYKYDGERAQIHYLEDGS-VEIYSRN----AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526 (797)
Q Consensus 452 g~~~~~E~KyDG~R~qih~~~~g~-V~ifSR~----gkd~T~~yPel~~~l~~~~~~~v~~~ILDGElVa~d~~~g~~lp 526 (797)
+..|++|+|+||.-+.+.+. +|. ++++||. |+|+|+....+. .+...+. ....+.+-||++.-. ..
T Consensus 108 ~~~~~~~~KiDG~si~l~Y~-~G~l~~a~TRGdG~~GeDiT~~~~~i~-~ip~~l~-~~~~~~iRGEl~~~~------~~ 178 (313)
T d1ta8a_ 108 PVAYCCELKIDGLAISLRYE-NGVFVRGATRGDGTVGENITENLRTVR-SVPMRLT-EPISVEVRGECYMPK------QS 178 (313)
T ss_dssp CCCEEEEEEECSEEEEEEEE-TTEEEEEEECTTSSEEEBCHHHHTTCT-TSCSBCS-SCCCEEEEEEEECCH------HH
T ss_pred ccceeeeeecccceEEEEec-CCcEEEeeecccchHHHHHHHhhhhhc-ccccccc-CCcceeeeeEEEEec------cc
Confidence 45799999999999999985 676 7999999 999885432111 1122222 235799999999842 12
Q ss_pred hhhHHh-------------------hhcccCCccccccceEEEEeeeeecCCccccCCcHHHHHHHHHHhhccCCCcEEE
Q 003762 527 FQTLST-------------------RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587 (797)
Q Consensus 527 Fq~L~~-------------------R~Rk~~~~~~~~~~v~~~vFDILylnG~~L~~~Pl~ERr~lL~~l~~~~~~~i~~ 587 (797)
|..+.. -.+..........++.|++|++.+..+.. .....+....|....-.......
T Consensus 179 f~~~n~~~~~~~~~~f~N~RN~vaG~l~~k~~~~~~~~~l~f~~y~v~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~~- 255 (313)
T d1ta8a_ 179 FVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMK--AKTQFEALEELSAIGFRTNPERQ- 255 (313)
T ss_dssp HHHHHHHHHHTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCC--CSBHHHHHHHHHHTTCCCCTTCE-
T ss_pred hhhhHHHHHHhcccccccchhhhcccchhcccchhhhccccceeeecceecccc--cchhHHHhhhhhhcCCcCCCCeE-
Confidence 432211 11111000112457889999988654433 35566677777765433322222
Q ss_pred EeEEecCCHHHHHHHHHHHHHc----CCc--eeEEEeC
Q 003762 588 ATTLTSIDLDEIQKFLDAAVDA----SCE--GLIIKTM 619 (797)
Q Consensus 588 v~~~~~~~~eei~~~f~~ai~~----g~E--GlmvK~~ 619 (797)
.+.+.+++.++++...+. .+| |||+|--
T Consensus 256 ----~~~~~~ei~~~~~~~~~~R~~l~YeIDGIVikvn 289 (313)
T d1ta8a_ 256 ----LCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVN 289 (313)
T ss_dssp ----EESSHHHHHHHHHHHHHTGGGSSSCEEEEEEEES
T ss_pred ----EeCCHHHHHHHHHHHHHhhhcCCCCCceEEEEEe
Confidence 356788998888887643 344 9999974
No 13
>d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=97.25 E-value=0.0003 Score=73.29 Aligned_cols=171 Identities=14% Similarity=0.116 Sum_probs=101.3
Q ss_pred cccccc-cCChHHHH---hhc-----CCCceEEEeecceEEEEEEEecCCeEEEEecC----CCccCCCcchHHHHHHhh
Q 003762 434 PMLAKP-TKGVSEIV---NKF-----QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN----AERNTGKFPDVVLAVSRL 500 (797)
Q Consensus 434 PMLA~~-~~~i~~~l---~k~-----~g~~~~~E~KyDG~R~qih~~~~g~V~ifSR~----gkd~T~~yPel~~~l~~~ 500 (797)
|||.-. +.+.+++. +++ ....|++|+|+||.-+ +.+ .+| +..+||. |+|+|+.+..+.. +...
T Consensus 81 pMlSL~k~~~~~~~~~~~~r~~~~~~~~~~~~ve~KlDG~Si-L~y-~~G-v~~~TRGdG~~GeDiT~~~~~I~~-iP~~ 156 (314)
T d1dgsa3 81 RMYSLDNAFTYEEVLAFEERLEREAEAPSLYTVEHKVDGLSV-LYY-EEG-VWSTGSGDGEVGEEVTQNLLTIPT-IPRR 156 (314)
T ss_dssp CCCCCCEECSHHHHHHHHHHTTSSSCSCCEEEEEECCSCEEE-EEE-ETT-EEEEEECSSSEEEBCTGGGTSSTT-SCSB
T ss_pred eeeccccccchhhhhhhhhhhhccccccchhhhhhccCcceE-EEe-cCC-EeEEeecCCceehhhHhhHhhhcC-cchh
Confidence 898742 33444443 222 1245999999999998 555 366 8899996 7889876543321 1222
Q ss_pred cCCCCCCeEEEEEEEEEecCCCcccChhhHHh-------------------hhcccCCccccccceEEEEeeeeecCCc-
Q 003762 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLST-------------------RARKNVSLSDIKVDVCIYAFDILYRNGQ- 560 (797)
Q Consensus 501 ~~~~v~~~ILDGElVa~d~~~g~~lpFq~L~~-------------------R~Rk~~~~~~~~~~v~~~vFDILylnG~- 560 (797)
+......+.+=||++.-. ..|..+-. ..|...........+.++++++.+..+.
T Consensus 157 l~~~~~~l~IRGEl~i~~------~~F~~~n~~~~~~~~~~f~NpRN~aaG~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 230 (314)
T d1dgsa3 157 LKGVPDRLEVRGEVYMPI------EAFLRLNEELEERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLE 230 (314)
T ss_dssp CSSCCSEEEEEEEEECCH------HHHHHHHHHHHHHTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTT
T ss_pred ccCCCccceeeeeEEeec------chHHHHHHHHHHhcCCcccccchhhhhhhhcccchhhhhccccceeeecccccccc
Confidence 221125688999999742 13433211 1111100011245677777777654432
Q ss_pred cccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcC------CceeEEEeC
Q 003762 561 PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS------CEGLIIKTM 619 (797)
Q Consensus 561 ~L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g------~EGlmvK~~ 619 (797)
.-......+....|....-....... .+.+.+++.+++++..+.. ..|||+|--
T Consensus 231 ~~~~~~~~e~~~~l~~~g~~~~~~~~-----~~~~~e~l~~~~~~~~~~R~~l~y~iDGiVikvn 290 (314)
T d1dgsa3 231 ESGLKSQYELLLWLKEKGFPVEHCYE-----KALGAEGVEEVYRRGLAQRHALPFEADGVVLKLD 290 (314)
T ss_dssp SCCCCBHHHHHHHHHHTTCCCCSCEE-----EEEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEES
T ss_pred CCCcccHHHHHHhhhcccccCCcceE-----EECCHHHHHHHHHHHHHhhhcCCCCCCceEEEEe
Confidence 22345778888888887655444332 2456789999999876532 359999975
No 14
>d1xdna_ d.142.2.4 (A:) RNA editing ligase MP52 {Trypanosoma brucei [TaxId: 5691]}
Probab=97.03 E-value=0.0013 Score=66.02 Aligned_cols=180 Identities=19% Similarity=0.257 Sum_probs=100.2
Q ss_pred cCCCceEEEeecceEEEEEEEec---CCeEEEEecCCCccCC-Cc-------chHHHHHHh---hcC-----CCCCCeEE
Q 003762 450 FQDMEFTCEYKYDGERAQIHYLE---DGSVEIYSRNAERNTG-KF-------PDVVLAVSR---LKK-----PSVRSFVL 510 (797)
Q Consensus 450 ~~g~~~~~E~KyDG~R~qih~~~---~g~V~ifSR~gkd~T~-~y-------Pel~~~l~~---~~~-----~~v~~~IL 510 (797)
+.+++|.+.+|.||...-+++.. ++.|++=+|++---.+ .| +++.+.++. ++. .++.++++
T Consensus 26 l~~~ewVa~EKIHGaNFsii~~~~~dg~~V~~aKR~~~l~~~e~Ffgy~~i~~~l~~~~~~l~~~l~~~~~v~~~~~~vv 105 (265)
T d1xdna_ 26 LAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIMDPNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRLVL 105 (265)
T ss_dssp GGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEECCTTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSEEEE
T ss_pred cccceEEEEEeecCccEEEEEeecCCCcEEEEeecccccCCcccccchhhHHHHHHHHHHHHHHHHHhhhccCCccEEEE
Confidence 34678999999999988887732 3579999999854322 12 344433332 221 35678999
Q ss_pred EEEEEEEe--------------cCCCcccChhhHHhhhcccCCccccccceEEEEeeeeecCC---ccccCCcHHHHHHH
Q 003762 511 DCEIVAYD--------------REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG---QPLLQEQLRVRREH 573 (797)
Q Consensus 511 DGElVa~d--------------~~~g~~lpFq~L~~R~Rk~~~~~~~~~~v~~~vFDILylnG---~~L~~~Pl~ERr~l 573 (797)
=||++... ..+|++.++ ..-+..+.. .-.-..++.|+||||++-.+ ++..-+++.+=.+.
T Consensus 106 yGELfGg~Y~hp~v~~~~~~~~~~~g~~~~~--~~~~iQk~~-~v~Y~p~l~FyAFDI~~~~~~~~~~~~fl~~d~~~e~ 182 (265)
T d1xdna_ 106 NGELFGAKYKHPLVPKSEKWCTLPNGKKFPI--AGVQIQREP-FPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEF 182 (265)
T ss_dssp EEEEEEEECCCTTSCCCCCEEECTTSCEEEG--GGCCSCCCS-SCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHH
T ss_pred EEEecccccCCCcccccccccccccCccccc--cceeecccc-ccccCCCccEEEEEEEeccCCCcceeeeccHHHHHHH
Confidence 99999842 122221111 111111110 00112368999999998755 34445777776666
Q ss_pred HHHhhccCCCcEEEEeEEecCCHHHHHHHHH--------HH--------HHcCCceeEEEeCCCCCC---ccCCCCCCCe
Q 003762 574 LYDSFEEEPGFFQFATTLTSIDLDEIQKFLD--------AA--------VDASCEGLIIKTMDRDAT---YEPSKRSLNW 634 (797)
Q Consensus 574 L~~l~~~~~~~i~~v~~~~~~~~eei~~~f~--------~a--------i~~g~EGlmvK~~~~ds~---Y~pGkRs~~W 634 (797)
.... ++ +..++.....+.+++..+=- .. -.+=.||.|+|.+ ... +.++. ..--
T Consensus 183 ~~~~----~g-l~yap~L~rGt~~e~~~~pv~~F~s~vp~~lgl~~~p~~~N~AEG~ViKp~--~~~~~~~~~ng-~R~i 254 (265)
T d1xdna_ 183 SSKV----PN-LLYARALVRGTLDECLAFDVENFMTPLPALLGLGNYPLEGNLAEGVVIRHV--RRGDPAVEKHN-VSTI 254 (265)
T ss_dssp HHTS----TT-CEECCCSEEESHHHHHTCCGGGCBCSHHHHTTCTTSCCTTCBCCEEEEEET--TTTCHHHHTTC-CCCE
T ss_pred Hhhc----cC-ccccchhhcccHHHHhcCcccccccccHhhcCCCCCCCCCceeeeEEEEec--ccCCcccccCC-ceEE
Confidence 5543 22 22333332334444432220 00 1345899999997 433 44432 2378
Q ss_pred EEEccc
Q 003762 635 LKLKKD 640 (797)
Q Consensus 635 lKlK~d 640 (797)
+|+|.+
T Consensus 255 iK~K~~ 260 (265)
T d1xdna_ 255 IKLRCS 260 (265)
T ss_dssp EEEECH
T ss_pred EEecCc
Confidence 999985
No 15
>d1x9na1 a.235.1.1 (A:262-533) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.68 E-value=0.035 Score=56.15 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=75.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHh---cCCChHHHHHHHHhhhc-------cCcccHHHHHHHHHH
Q 003762 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA---ATDCEPQYLIRLLQSKL-------RIGLAEQTLLAALGQ 369 (797)
Q Consensus 300 ~~~LTI~eV~~~L~kIA~~~G~~s~~~K~~~L~~LL~~---~t~~E~k~LiRiIlkdL-------RiGi~e~tvl~Ala~ 369 (797)
..+..-.++-+.+++|.+. .++-+|+++|..+|.+ .++.|.-+.++++++.+ .+|++++++.+|++.
T Consensus 23 ~~~vpf~~la~~f~~ie~t---s~rl~k~~iL~~~f~~~~~~~p~dl~~~vyL~~g~l~P~~e~~elgige~~l~kai~e 99 (272)
T d1x9na1 23 GQKVPYLAVARTFEKIEEV---SARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ 99 (272)
T ss_dssp TSCCBHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHTCSSCGGGCCCCCCCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHhCCcCcchhchhcccCHHHHHHHHHH
Confidence 3567788888888988654 4577889999999986 48999999999999964 589999999999999
Q ss_pred hhccCCCCCCCCCCCcchHHHHHHHHHHHhhcCCchhhhHhhhh
Q 003762 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413 (797)
Q Consensus 370 a~~~~~~~~~~~~~l~~~l~~a~~~vk~~y~~~pd~~~v~~~l~ 413 (797)
+...+. ..+++.|...-|++.++..++
T Consensus 100 ~~G~~~-----------------~~i~~~~~~~GDlG~va~~~~ 126 (272)
T d1x9na1 100 ATGRQL-----------------ESVRAEAAEKGDVGLVAENSR 126 (272)
T ss_dssp HHTCCH-----------------HHHHHHHHHHTCHHHHTCC--
T ss_pred HHCcCH-----------------HHHHHHHHHcCCHHHHHHHHh
Confidence 876542 245778888899988876443
No 16
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=61.04 E-value=8.2 Score=37.78 Aligned_cols=58 Identities=14% Similarity=0.058 Sum_probs=50.6
Q ss_pred ccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 562 L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
...++.+||+++++.+.....+++.++-.....+.++..++-+.+.+.|..|+|+-.+
T Consensus 54 ~~~Ls~eEr~~l~~~~~~~~~~~~~vi~g~~~~s~~~~i~~a~~a~~~Gad~v~i~~P 111 (296)
T d1xxxa1 54 SPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 111 (296)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hhhCCHHHHHHHHHHHHHHhccccceEeccccchhHHHHHHHHHHHHhcCCeEEEEec
Confidence 4568999999999998887777777776666778999999999999999999999987
No 17
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=56.37 E-value=9.1 Score=37.17 Aligned_cols=65 Identities=5% Similarity=-0.047 Sum_probs=51.8
Q ss_pred eecCCc--cccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 555 LYRNGQ--PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 555 LylnG~--~L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
++++|. ....++.+||+++++.+.....+++.++-.....+.++..++-+.+.+.|.+|+|+-.+
T Consensus 41 l~~~G~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~ilv~pP 107 (292)
T d1xkya1 41 IVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 107 (292)
T ss_dssp EEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEECeEccchhhCCHHHHHHHHHHHHHHhCCCceEEEecCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 444542 23568999999999999876666666666666778889999999999999999999876
No 18
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=52.51 E-value=9.6 Score=37.12 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=52.3
Q ss_pred eecCCc--cccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 555 LYRNGQ--PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 555 LylnG~--~L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
++++|. .-..++.+||+++++.......+++.++-.....+.++..++-+.+.+.|..|+|+-.+
T Consensus 42 i~v~GttGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~s~~~~iela~~a~~~Gad~i~~~pP 108 (293)
T d1f74a_ 42 LYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTP 108 (293)
T ss_dssp EEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEECCCC
T ss_pred EEECccCcchhhCCHHHHhhhhheeeccccCccccccccccccHHHHHHHHHHHHHcCCCEeeccCc
Confidence 444552 23468999999999998877777777776666778899999999999999999999765
No 19
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=45.75 E-value=12 Score=36.34 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=48.8
Q ss_pred ccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 562 L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
...++..||+++++..+....+++.++-.....+.++..++-+.+.+.|..|+|+-.+
T Consensus 48 ~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~st~~ai~~a~~A~~~Gad~v~v~pP 105 (295)
T d1o5ka_ 48 SPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 105 (295)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hhhCCHHHHHHHhhhhccccccCCceEeecccccHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4568999999999988887777666666666778889999999999999999999765
No 20
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=45.06 E-value=14 Score=35.87 Aligned_cols=65 Identities=20% Similarity=0.215 Sum_probs=51.8
Q ss_pred eecCCc--cccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 555 LYRNGQ--PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 555 LylnG~--~L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
++++|. ....++.+||.++++.+.....+++.++-.....+.++..++.+.+.+.|..|+|+=.+
T Consensus 40 i~~~G~tGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~s~~~~i~~a~~a~~~Gad~~~v~~p 106 (295)
T d1hl2a_ 40 LYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 106 (295)
T ss_dssp EEESSGGGTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred EEECeEccchhhCCHHHHHHHHhhhHHhhccccceeeccccchhhHHHHHHHHHHhcCCceeeeeec
Confidence 444442 34568999999999988877677666666666778899999999999999999999876
No 21
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=37.46 E-value=14 Score=35.94 Aligned_cols=58 Identities=9% Similarity=-0.021 Sum_probs=48.1
Q ss_pred ccCCcHHHHHHHHHHhhccCCCcEEEEeEEecCCHHHHHHHHHHHHHcCCceeEEEeC
Q 003762 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619 (797)
Q Consensus 562 L~~~Pl~ERr~lL~~l~~~~~~~i~~v~~~~~~~~eei~~~f~~ai~~g~EGlmvK~~ 619 (797)
...++.+||+++++.++....+++.++-.....+.++..++.+.+.+.|..|+|+-.+
T Consensus 48 ~~~Ls~~Er~~~~~~~~~~~~~~~~vi~g~~~~s~~~~i~~~~~a~~~Gad~~~~~pP 105 (292)
T d2a6na1 48 SATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHTTTTSSCCEEEEECC
T ss_pred hhhCCHHHHHHHhhhhhhhccccceeEeecccchHHHHHHHhccHHhcCCcceeccCC
Confidence 4568999999999998887777666666666778888889999999999999999876
Done!