Query 003776
Match_columns 796
No_of_seqs 671 out of 3851
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 03:40:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003776.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003776hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.6 3.4E-15 1.2E-19 156.8 13.5 120 372-505 28-149 (257)
2 1vl5_A Unknown conserved prote 99.6 5.2E-15 1.8E-19 152.8 13.5 112 375-492 27-141 (260)
3 3bus_A REBM, methyltransferase 99.6 1.9E-14 6.6E-19 149.1 16.7 166 365-536 41-212 (273)
4 2o57_A Putative sarcosine dime 99.5 4.3E-14 1.5E-18 148.7 14.6 127 365-493 58-189 (297)
5 1xxl_A YCGJ protein; structura 99.5 1.2E-13 4.2E-18 141.3 17.0 105 388-494 20-127 (239)
6 3bgv_A MRNA CAP guanine-N7 met 99.5 2.5E-15 8.6E-20 160.2 4.2 103 389-492 34-156 (313)
7 3f4k_A Putative methyltransfer 99.5 1.6E-13 5.4E-18 140.8 17.0 155 371-536 31-192 (257)
8 3kkz_A Uncharacterized protein 99.5 3.4E-13 1.2E-17 139.9 18.0 155 371-536 31-192 (267)
9 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.6E-13 5.6E-18 144.1 15.1 103 388-494 69-181 (261)
10 1nkv_A Hypothetical protein YJ 99.5 1.3E-13 4.6E-18 141.3 13.9 116 370-492 21-141 (256)
11 3vc1_A Geranyl diphosphate 2-C 99.5 2.1E-13 7.2E-18 145.4 15.2 145 388-536 116-265 (312)
12 3hnr_A Probable methyltransfer 99.5 1.7E-13 5.7E-18 137.4 13.5 143 389-538 45-199 (220)
13 3ujc_A Phosphoethanolamine N-m 99.5 1E-13 3.4E-18 142.3 10.9 116 370-492 40-160 (266)
14 3dlc_A Putative S-adenosyl-L-m 99.5 2.6E-13 8.8E-18 134.7 13.2 102 391-494 45-151 (219)
15 2p7i_A Hypothetical protein; p 99.5 1.3E-13 4.3E-18 139.5 10.4 98 389-492 42-142 (250)
16 3ccf_A Cyclopropane-fatty-acyl 99.5 4E-13 1.4E-17 140.4 13.8 109 389-505 57-167 (279)
17 3mgg_A Methyltransferase; NYSG 99.5 5.7E-13 1.9E-17 138.5 14.9 102 388-491 36-142 (276)
18 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.2E-13 4.2E-18 141.2 9.2 139 347-492 55-198 (254)
19 3mti_A RRNA methylase; SAM-dep 99.4 8.3E-13 2.8E-17 129.2 14.6 105 389-494 22-138 (185)
20 1pjz_A Thiopurine S-methyltran 99.4 8.4E-14 2.9E-18 139.9 7.4 101 389-490 22-139 (203)
21 2p35_A Trans-aconitate 2-methy 99.4 1.5E-12 5.1E-17 133.4 16.8 108 374-492 22-133 (259)
22 2yqz_A Hypothetical protein TT 99.4 3.8E-13 1.3E-17 138.0 12.2 101 388-490 38-140 (263)
23 3dh0_A SAM dependent methyltra 99.4 9.6E-13 3.3E-17 131.7 14.6 102 388-491 36-143 (219)
24 3g5t_A Trans-aconitate 3-methy 99.4 4.9E-13 1.7E-17 141.3 13.2 111 372-489 24-147 (299)
25 3dtn_A Putative methyltransfer 99.4 9.8E-13 3.3E-17 133.2 14.6 115 372-493 30-150 (234)
26 3gu3_A Methyltransferase; alph 99.4 1E-12 3.5E-17 138.2 15.1 116 372-493 8-128 (284)
27 3g5l_A Putative S-adenosylmeth 99.4 4.8E-13 1.6E-17 137.3 11.9 109 375-491 34-145 (253)
28 3sm3_A SAM-dependent methyltra 99.4 1.2E-12 4.1E-17 131.5 14.5 104 389-494 30-144 (235)
29 3dli_A Methyltransferase; PSI- 99.4 4.8E-13 1.6E-17 136.6 11.5 119 368-499 23-147 (240)
30 2ex4_A Adrenal gland protein A 99.4 3.3E-13 1.1E-17 138.0 10.2 103 389-492 79-186 (241)
31 2kw5_A SLR1183 protein; struct 99.4 8E-13 2.7E-17 130.9 12.1 98 392-492 32-132 (202)
32 3l8d_A Methyltransferase; stru 99.4 7.5E-13 2.6E-17 134.3 12.0 109 373-491 43-153 (242)
33 1ve3_A Hypothetical protein PH 99.4 9.2E-13 3.2E-17 132.1 12.4 102 390-492 39-143 (227)
34 3ofk_A Nodulation protein S; N 99.4 8.9E-13 3E-17 131.9 11.7 112 373-492 39-155 (216)
35 2gb4_A Thiopurine S-methyltran 99.4 3.3E-13 1.1E-17 141.1 8.7 101 389-490 68-190 (252)
36 4fsd_A Arsenic methyltransfera 99.4 3.3E-13 1.1E-17 148.7 9.1 108 389-497 83-209 (383)
37 2xvm_A Tellurite resistance pr 99.4 2.7E-12 9.1E-17 125.9 13.9 100 389-491 32-136 (199)
38 3h2b_A SAM-dependent methyltra 99.4 1.8E-12 6.1E-17 128.5 12.5 97 390-492 42-142 (203)
39 2gs9_A Hypothetical protein TT 99.4 1.8E-12 6E-17 129.3 12.4 97 389-492 36-133 (211)
40 3hem_A Cyclopropane-fatty-acyl 99.4 2.7E-12 9.3E-17 135.8 14.2 120 364-492 51-184 (302)
41 3orh_A Guanidinoacetate N-meth 99.4 3.7E-13 1.3E-17 138.6 7.0 114 371-490 47-169 (236)
42 1zx0_A Guanidinoacetate N-meth 99.4 5.9E-13 2E-17 136.0 8.4 114 370-490 46-169 (236)
43 4htf_A S-adenosylmethionine-de 99.4 1.6E-12 5.6E-17 136.1 11.9 102 389-492 68-174 (285)
44 2p8j_A S-adenosylmethionine-de 99.4 1.3E-12 4.6E-17 129.5 10.7 102 389-492 23-129 (209)
45 3jwh_A HEN1; methyltransferase 99.4 2.2E-12 7.7E-17 129.5 12.4 112 373-490 17-140 (217)
46 3jwg_A HEN1, methyltransferase 99.4 2.2E-12 7.6E-17 129.5 12.1 112 373-490 17-140 (219)
47 1y8c_A S-adenosylmethionine-de 99.4 1.9E-12 6.6E-17 130.9 11.5 115 372-491 22-142 (246)
48 2aot_A HMT, histamine N-methyl 99.4 5.6E-13 1.9E-17 140.8 7.9 103 388-491 51-172 (292)
49 3e23_A Uncharacterized protein 99.4 2.1E-12 7.1E-17 128.9 11.3 98 389-494 43-144 (211)
50 1kpg_A CFA synthase;, cyclopro 99.4 3.8E-12 1.3E-16 133.2 13.7 119 365-492 44-169 (287)
51 3thr_A Glycine N-methyltransfe 99.4 7.5E-13 2.6E-17 138.8 8.3 117 371-492 43-176 (293)
52 3ege_A Putative methyltransfer 99.4 1.1E-12 3.9E-17 136.1 9.5 109 372-492 21-131 (261)
53 2vdw_A Vaccinia virus capping 99.4 1.2E-12 4.1E-17 140.3 9.7 102 389-492 48-170 (302)
54 3pfg_A N-methyltransferase; N, 99.3 2.5E-12 8.6E-17 132.9 11.6 96 389-490 50-150 (263)
55 1wzn_A SAM-dependent methyltra 99.3 5.5E-12 1.9E-16 129.1 13.7 101 389-491 41-145 (252)
56 3bkw_A MLL3908 protein, S-aden 99.3 2.8E-12 9.7E-17 129.9 11.0 108 376-491 34-144 (243)
57 3d2l_A SAM-dependent methyltra 99.3 5.6E-12 1.9E-16 127.7 13.0 112 372-491 22-137 (243)
58 2avn_A Ubiquinone/menaquinone 99.3 2.8E-12 9.5E-17 132.9 10.9 98 389-492 54-153 (260)
59 3g2m_A PCZA361.24; SAM-depende 99.3 3.5E-12 1.2E-16 134.8 11.7 101 390-492 83-191 (299)
60 3ou2_A SAM-dependent methyltra 99.3 2.3E-12 7.9E-17 128.2 9.6 97 389-492 46-147 (218)
61 2pxx_A Uncharacterized protein 99.3 4.7E-12 1.6E-16 125.4 11.2 113 371-492 30-160 (215)
62 1vlm_A SAM-dependent methyltra 99.3 2E-12 6.9E-17 130.4 8.6 94 390-493 48-141 (219)
63 3ocj_A Putative exported prote 99.3 5.2E-12 1.8E-16 134.1 11.9 100 389-491 118-227 (305)
64 1dus_A MJ0882; hypothetical pr 99.3 1E-11 3.5E-16 120.6 12.7 114 372-492 39-158 (194)
65 3i9f_A Putative type 11 methyl 99.3 4.5E-12 1.5E-16 122.1 9.9 95 389-492 17-113 (170)
66 2a14_A Indolethylamine N-methy 99.3 1.5E-12 5.3E-17 135.7 7.0 102 389-491 55-197 (263)
67 3p9n_A Possible methyltransfer 99.3 8.4E-12 2.9E-16 123.0 11.7 124 366-492 22-154 (189)
68 2fk8_A Methoxy mycolic acid sy 99.3 1.1E-11 3.9E-16 131.8 13.6 119 366-493 71-196 (318)
69 3bxo_A N,N-dimethyltransferase 99.3 8.7E-12 3E-16 126.0 12.1 97 389-491 40-141 (239)
70 3m70_A Tellurite resistance pr 99.3 1E-11 3.4E-16 130.1 12.5 100 389-491 120-223 (286)
71 3g07_A 7SK snRNA methylphospha 99.3 2.1E-12 7.3E-17 136.9 7.4 101 389-490 46-219 (292)
72 3e8s_A Putative SAM dependent 99.3 5.1E-12 1.7E-16 126.0 9.1 96 389-492 52-153 (227)
73 3cgg_A SAM-dependent methyltra 99.3 7.4E-11 2.5E-15 114.6 16.8 100 389-493 46-149 (195)
74 1ri5_A MRNA capping enzyme; me 99.3 7E-12 2.4E-16 130.9 10.1 102 389-492 64-175 (298)
75 3eey_A Putative rRNA methylase 99.3 1.9E-11 6.4E-16 120.7 12.5 105 389-494 22-142 (197)
76 1p91_A Ribosomal RNA large sub 99.3 1.4E-11 5E-16 127.6 12.1 98 389-500 85-186 (269)
77 3lcc_A Putative methyl chlorid 99.3 1.7E-11 5.7E-16 124.6 11.8 102 390-493 67-173 (235)
78 1nt2_A Fibrillarin-like PRE-rR 99.3 3.3E-11 1.1E-15 122.2 13.5 98 388-491 56-161 (210)
79 3dmg_A Probable ribosomal RNA 99.3 2.4E-11 8.3E-16 134.4 13.3 104 389-494 233-343 (381)
80 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.2E-11 7.7E-16 117.4 11.3 99 388-492 24-128 (178)
81 1yzh_A TRNA (guanine-N(7)-)-me 99.3 3.4E-11 1.2E-15 121.1 13.1 101 389-491 41-156 (214)
82 3bkx_A SAM-dependent methyltra 99.3 4.9E-11 1.7E-15 123.6 14.7 117 372-494 30-162 (275)
83 3dxy_A TRNA (guanine-N(7)-)-me 99.2 9.5E-12 3.2E-16 127.0 8.6 101 389-491 34-150 (218)
84 3njr_A Precorrin-6Y methylase; 99.2 5.4E-11 1.8E-15 119.8 14.0 98 388-492 54-155 (204)
85 2fca_A TRNA (guanine-N(7)-)-me 99.2 1.7E-11 5.8E-16 124.1 10.4 101 389-491 38-153 (213)
86 2g72_A Phenylethanolamine N-me 99.2 9.2E-12 3.1E-16 130.9 8.4 102 389-491 71-215 (289)
87 3ggd_A SAM-dependent methyltra 99.2 1E-11 3.4E-16 126.8 8.5 100 389-492 56-164 (245)
88 2zfu_A Nucleomethylin, cerebra 99.2 2.7E-11 9.4E-16 121.2 11.4 86 389-492 67-152 (215)
89 4e2x_A TCAB9; kijanose, tetron 99.2 1.1E-12 3.8E-17 145.3 1.1 115 368-492 90-209 (416)
90 3e05_A Precorrin-6Y C5,15-meth 99.2 1.1E-10 3.7E-15 116.2 14.9 109 375-492 30-143 (204)
91 3cc8_A Putative methyltransfer 99.2 8.6E-12 2.9E-16 124.6 6.9 96 389-492 32-131 (230)
92 3q7e_A Protein arginine N-meth 99.2 3.7E-11 1.3E-15 131.0 12.4 100 389-490 66-172 (349)
93 3uwp_A Histone-lysine N-methyl 99.2 1.8E-11 6.3E-16 136.2 10.1 126 364-495 152-292 (438)
94 3grz_A L11 mtase, ribosomal pr 99.2 3E-11 1E-15 120.2 10.5 95 389-490 60-158 (205)
95 3evz_A Methyltransferase; NYSG 99.2 1.1E-10 3.9E-15 117.8 14.5 103 389-492 55-180 (230)
96 3m33_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 122.0 10.9 88 389-488 48-139 (226)
97 2fhp_A Methylase, putative; al 99.2 3.7E-11 1.3E-15 116.8 10.2 122 365-492 23-155 (187)
98 3iv6_A Putative Zn-dependent a 99.2 2.9E-11 9.8E-16 127.5 9.9 109 373-493 33-150 (261)
99 2fyt_A Protein arginine N-meth 99.2 9.1E-11 3.1E-15 127.6 13.9 111 372-488 51-168 (340)
100 3fpf_A Mtnas, putative unchara 99.2 8.5E-11 2.9E-15 126.0 12.9 97 388-491 121-222 (298)
101 3ckk_A TRNA (guanine-N(7)-)-me 99.2 4.4E-11 1.5E-15 123.6 10.0 102 389-491 46-168 (235)
102 3lbf_A Protein-L-isoaspartate 99.2 1.1E-10 3.6E-15 116.5 12.2 110 372-493 64-176 (210)
103 2ift_A Putative methylase HI07 99.2 3.9E-11 1.3E-15 120.3 8.8 118 370-493 37-165 (201)
104 4df3_A Fibrillarin-like rRNA/T 99.2 3.5E-11 1.2E-15 124.8 8.5 112 374-491 63-182 (233)
105 1xdz_A Methyltransferase GIDB; 99.2 6.7E-11 2.3E-15 121.3 10.3 96 389-490 70-173 (240)
106 2qe6_A Uncharacterized protein 99.2 1.8E-10 6.3E-15 121.5 13.9 101 389-492 77-197 (274)
107 2i62_A Nicotinamide N-methyltr 99.2 2.9E-11 9.9E-16 124.1 7.3 102 389-492 56-199 (265)
108 3r0q_C Probable protein argini 99.1 1.5E-10 5.3E-15 127.4 13.0 111 371-490 49-168 (376)
109 3i53_A O-methyltransferase; CO 99.1 2.8E-10 9.7E-15 122.2 14.8 102 389-495 169-278 (332)
110 2y1w_A Histone-arginine methyl 99.1 4.8E-11 1.6E-15 130.0 8.8 113 371-490 36-154 (348)
111 1ej0_A FTSJ; methyltransferase 99.1 8.6E-11 2.9E-15 111.7 9.2 93 388-492 21-137 (180)
112 1ws6_A Methyltransferase; stru 99.1 4.4E-11 1.5E-15 114.4 7.0 121 366-492 20-148 (171)
113 4dcm_A Ribosomal RNA large sub 99.1 2E-10 7E-15 126.7 13.2 114 372-492 209-335 (375)
114 2fpo_A Methylase YHHF; structu 99.1 1.2E-10 4.2E-15 116.7 10.1 118 369-492 37-161 (202)
115 3mq2_A 16S rRNA methyltransfer 99.1 7.2E-11 2.5E-15 118.5 8.5 101 389-491 27-140 (218)
116 3gwz_A MMCR; methyltransferase 99.1 9E-10 3.1E-14 120.6 17.9 143 388-536 201-352 (369)
117 4dzr_A Protein-(glutamine-N5) 99.1 3.1E-11 1.1E-15 119.3 5.2 114 372-490 16-164 (215)
118 3lpm_A Putative methyltransfer 99.1 2.4E-10 8.1E-15 118.7 12.1 102 389-491 49-176 (259)
119 3htx_A HEN1; HEN1, small RNA m 99.1 4.2E-10 1.4E-14 133.6 15.4 115 372-492 708-835 (950)
120 2esr_A Methyltransferase; stru 99.1 5.1E-11 1.8E-15 115.6 6.4 114 373-492 18-139 (177)
121 2yxd_A Probable cobalt-precorr 99.1 3.1E-10 1.1E-14 109.3 11.7 108 371-491 21-131 (183)
122 2frn_A Hypothetical protein PH 99.1 2.9E-10 1E-14 119.9 12.5 114 366-492 108-226 (278)
123 2nxc_A L11 mtase, ribosomal pr 99.1 9.2E-11 3.1E-15 122.1 8.6 97 389-491 120-218 (254)
124 3p2e_A 16S rRNA methylase; met 99.1 5.3E-11 1.8E-15 122.1 6.6 100 389-492 24-140 (225)
125 3gdh_A Trimethylguanosine synt 99.1 8.4E-12 2.9E-16 127.3 0.4 99 389-490 78-180 (241)
126 1g6q_1 HnRNP arginine N-methyl 99.1 3.4E-10 1.1E-14 122.3 12.7 113 371-489 24-143 (328)
127 1qzz_A RDMB, aclacinomycin-10- 99.1 1E-09 3.5E-14 119.3 16.5 100 388-492 181-288 (374)
128 3q87_B N6 adenine specific DNA 99.1 2.7E-10 9.1E-15 111.2 10.3 91 389-491 23-123 (170)
129 1fbn_A MJ fibrillarin homologu 99.1 2.4E-10 8E-15 116.5 10.3 97 388-490 73-177 (230)
130 2ipx_A RRNA 2'-O-methyltransfe 99.1 3.9E-10 1.3E-14 114.8 11.8 99 388-492 76-183 (233)
131 2pjd_A Ribosomal RNA small sub 99.1 2.4E-10 8.3E-15 124.0 10.9 112 373-492 184-304 (343)
132 3dp7_A SAM-dependent methyltra 99.1 7.1E-10 2.4E-14 121.1 14.7 105 389-496 179-292 (363)
133 1jsx_A Glucose-inhibited divis 99.1 3.2E-10 1.1E-14 112.5 10.9 95 390-491 66-165 (207)
134 3fzg_A 16S rRNA methylase; met 99.1 8.6E-11 2.9E-15 118.5 6.7 110 371-489 37-150 (200)
135 1l3i_A Precorrin-6Y methyltran 99.1 4.4E-10 1.5E-14 108.8 11.4 110 373-492 21-135 (192)
136 3hp7_A Hemolysin, putative; st 99.1 1.5E-09 5.1E-14 116.1 16.3 98 389-495 85-189 (291)
137 3adn_A Spermidine synthase; am 99.1 7.3E-10 2.5E-14 118.5 13.5 102 389-491 83-198 (294)
138 1vbf_A 231AA long hypothetical 99.1 4.8E-10 1.6E-14 113.3 11.3 108 372-492 57-166 (231)
139 2plw_A Ribosomal RNA methyltra 99.1 4.3E-10 1.5E-14 111.1 10.6 91 389-491 22-154 (201)
140 2b3t_A Protein methyltransfera 99.1 3.2E-09 1.1E-13 111.2 17.7 115 370-491 95-238 (276)
141 3u81_A Catechol O-methyltransf 99.1 4.2E-10 1.4E-14 113.8 10.6 101 389-492 58-171 (221)
142 3g89_A Ribosomal RNA small sub 99.1 2.4E-10 8.1E-15 119.1 8.9 98 388-491 79-184 (249)
143 2ip2_A Probable phenazine-spec 99.1 2.3E-09 7.8E-14 114.9 16.7 100 391-494 169-275 (334)
144 2pwy_A TRNA (adenine-N(1)-)-me 99.1 8.6E-10 2.9E-14 113.0 12.8 99 388-492 95-199 (258)
145 1af7_A Chemotaxis receptor met 99.1 4E-10 1.4E-14 119.5 10.6 100 390-490 106-251 (274)
146 1tw3_A COMT, carminomycin 4-O- 99.1 1.8E-09 6.1E-14 116.9 15.9 101 388-493 182-290 (360)
147 1u2z_A Histone-lysine N-methyl 99.1 6.5E-10 2.2E-14 125.0 12.7 118 371-494 228-362 (433)
148 1x19_A CRTF-related protein; m 99.1 1.4E-09 4.9E-14 118.1 15.1 101 388-493 189-297 (359)
149 3dr5_A Putative O-methyltransf 99.0 4.5E-10 1.5E-14 114.8 10.3 114 369-491 40-163 (221)
150 2r3s_A Uncharacterized protein 99.0 7.8E-10 2.7E-14 118.2 12.5 102 389-494 165-274 (335)
151 1i9g_A Hypothetical protein RV 99.0 7E-10 2.4E-14 115.5 11.8 108 375-492 89-204 (280)
152 3mcz_A O-methyltransferase; ad 99.0 1.3E-09 4.3E-14 117.8 13.9 101 390-493 180-289 (352)
153 3ntv_A MW1564 protein; rossman 99.0 4.6E-10 1.6E-14 114.8 10.0 99 389-492 71-177 (232)
154 3mb5_A SAM-dependent methyltra 99.0 8.2E-10 2.8E-14 113.4 11.9 106 375-492 83-195 (255)
155 1dl5_A Protein-L-isoaspartate 99.0 1E-09 3.5E-14 117.7 12.6 108 372-491 62-175 (317)
156 2yxe_A Protein-L-isoaspartate 99.0 2E-09 6.9E-14 107.5 13.5 108 372-492 64-178 (215)
157 2vdv_E TRNA (guanine-N(7)-)-me 99.0 9.3E-10 3.2E-14 113.3 11.3 102 389-491 49-173 (246)
158 3opn_A Putative hemolysin; str 99.0 1.3E-10 4.5E-15 120.0 4.8 93 388-491 36-137 (232)
159 3tfw_A Putative O-methyltransf 99.0 8E-10 2.7E-14 114.3 10.8 100 389-493 63-172 (248)
160 2ozv_A Hypothetical protein AT 99.0 7.9E-10 2.7E-14 115.4 10.6 103 389-492 36-171 (260)
161 1xj5_A Spermidine synthase 1; 99.0 2.2E-09 7.4E-14 116.9 13.9 146 389-537 120-282 (334)
162 1i1n_A Protein-L-isoaspartate 99.0 9E-10 3.1E-14 111.1 10.1 97 388-492 76-183 (226)
163 1yb2_A Hypothetical protein TA 99.0 9.7E-10 3.3E-14 115.2 10.3 97 388-492 109-212 (275)
164 1g8a_A Fibrillarin-like PRE-rR 99.0 2.1E-09 7.2E-14 108.6 12.3 98 388-491 72-178 (227)
165 1o9g_A RRNA methyltransferase; 99.0 6E-10 2.1E-14 114.8 8.3 102 389-490 51-213 (250)
166 3id6_C Fibrillarin-like rRNA/T 99.0 2.9E-09 9.7E-14 110.4 13.2 111 374-491 62-181 (232)
167 3lst_A CALO1 methyltransferase 99.0 1.2E-09 4.1E-14 118.5 10.3 141 388-536 183-332 (348)
168 3sso_A Methyltransferase; macr 99.0 4.7E-10 1.6E-14 124.6 7.2 92 389-491 216-324 (419)
169 3tr6_A O-methyltransferase; ce 99.0 8.6E-10 2.9E-14 111.0 8.4 99 389-492 64-175 (225)
170 1jg1_A PIMT;, protein-L-isoasp 99.0 2.7E-09 9.1E-14 108.9 11.8 107 373-492 79-190 (235)
171 3tma_A Methyltransferase; thum 99.0 4.2E-09 1.4E-13 114.6 14.0 103 388-492 202-318 (354)
172 2yvl_A TRMI protein, hypotheti 98.9 5E-09 1.7E-13 106.6 13.5 98 388-492 90-191 (248)
173 3c3p_A Methyltransferase; NP_9 98.9 1.2E-09 4.1E-14 109.3 8.5 97 390-492 57-161 (210)
174 1r18_A Protein-L-isoaspartate( 98.9 3.4E-09 1.2E-13 107.4 11.9 111 372-492 69-195 (227)
175 3giw_A Protein of unknown func 98.9 7.1E-10 2.4E-14 117.7 7.1 102 389-491 78-200 (277)
176 3bzb_A Uncharacterized protein 98.9 5.6E-09 1.9E-13 110.2 13.7 120 368-492 62-206 (281)
177 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.8E-09 9.4E-14 116.6 11.4 92 389-491 209-306 (372)
178 2ld4_A Anamorsin; methyltransf 98.9 3.1E-10 1.1E-14 110.2 3.4 87 388-491 11-101 (176)
179 2nyu_A Putative ribosomal RNA 98.9 3.7E-09 1.3E-13 103.8 10.8 94 388-492 21-146 (196)
180 2h00_A Methyltransferase 10 do 98.9 9.5E-10 3.3E-14 113.2 6.9 101 389-490 65-191 (254)
181 4hc4_A Protein arginine N-meth 98.9 3.9E-09 1.3E-13 116.7 12.1 112 371-489 69-187 (376)
182 3b3j_A Histone-arginine methyl 98.9 2.6E-09 8.9E-14 121.6 11.0 112 372-490 145-262 (480)
183 3bwc_A Spermidine synthase; SA 98.9 2.6E-09 9.1E-14 114.3 10.4 103 389-492 95-211 (304)
184 2bm8_A Cephalosporin hydroxyla 98.9 1.2E-09 4.1E-14 112.7 7.2 93 390-491 82-187 (236)
185 2b25_A Hypothetical protein; s 98.9 4.1E-09 1.4E-13 113.6 11.6 99 388-492 104-220 (336)
186 2gpy_A O-methyltransferase; st 98.9 2E-09 7E-14 109.3 8.7 98 389-491 54-160 (233)
187 1o54_A SAM-dependent O-methylt 98.9 3.5E-09 1.2E-13 110.8 10.7 97 388-492 111-214 (277)
188 3reo_A (ISO)eugenol O-methyltr 98.9 4.7E-09 1.6E-13 115.0 12.1 97 388-495 202-304 (368)
189 2oxt_A Nucleoside-2'-O-methylt 98.9 3.8E-09 1.3E-13 111.3 10.7 102 388-492 73-186 (265)
190 3duw_A OMT, O-methyltransferas 98.9 3.1E-09 1E-13 107.0 9.3 100 389-493 58-169 (223)
191 2wa2_A Non-structural protein 98.9 3.5E-09 1.2E-13 112.2 10.2 100 388-492 81-194 (276)
192 2pbf_A Protein-L-isoaspartate 98.9 3.4E-09 1.2E-13 106.9 9.3 97 389-492 80-194 (227)
193 3a27_A TYW2, uncharacterized p 98.9 5.7E-09 1.9E-13 109.8 11.3 99 388-493 118-221 (272)
194 2b2c_A Spermidine synthase; be 98.9 3.2E-09 1.1E-13 114.6 9.4 102 389-491 108-222 (314)
195 1iy9_A Spermidine synthase; ro 98.9 7.4E-09 2.5E-13 109.3 12.0 102 389-491 75-189 (275)
196 2o07_A Spermidine synthase; st 98.9 5.2E-09 1.8E-13 112.3 10.9 102 389-491 95-209 (304)
197 1ixk_A Methyltransferase; open 98.9 7.5E-09 2.6E-13 111.3 11.8 106 388-494 117-249 (315)
198 3r3h_A O-methyltransferase, SA 98.9 1.5E-09 5E-14 112.4 6.0 99 389-492 60-171 (242)
199 3p9c_A Caffeic acid O-methyltr 98.9 9.9E-09 3.4E-13 112.4 12.7 97 388-495 200-302 (364)
200 3gjy_A Spermidine synthase; AP 98.9 3E-09 1E-13 115.1 8.3 102 390-492 90-201 (317)
201 1sui_A Caffeoyl-COA O-methyltr 98.9 3.8E-09 1.3E-13 109.6 8.9 98 389-491 79-190 (247)
202 1nv8_A HEMK protein; class I a 98.8 9.4E-09 3.2E-13 109.0 11.7 114 370-490 108-248 (284)
203 3dou_A Ribosomal RNA large sub 98.8 6E-09 2.1E-13 104.1 9.5 93 388-492 24-140 (191)
204 2igt_A SAM dependent methyltra 98.8 6.3E-09 2.2E-13 113.0 10.2 103 389-492 153-273 (332)
205 2pt6_A Spermidine synthase; tr 98.8 5.8E-09 2E-13 112.8 9.4 103 389-492 116-231 (321)
206 1inl_A Spermidine synthase; be 98.8 1E-08 3.5E-13 109.4 10.8 103 389-492 90-206 (296)
207 2p41_A Type II methyltransfera 98.8 4.6E-09 1.6E-13 112.8 8.2 100 388-492 81-192 (305)
208 4dmg_A Putative uncharacterize 98.8 2.3E-08 7.8E-13 111.1 13.6 108 389-497 214-332 (393)
209 1fp2_A Isoflavone O-methyltran 98.8 7.4E-09 2.5E-13 112.3 9.4 95 389-494 188-291 (352)
210 2i7c_A Spermidine synthase; tr 98.8 7.3E-09 2.5E-13 109.7 9.1 103 389-492 78-193 (283)
211 1uir_A Polyamine aminopropyltr 98.8 6E-09 2E-13 112.1 8.5 102 389-491 77-195 (314)
212 2hnk_A SAM-dependent O-methylt 98.8 8.1E-09 2.8E-13 105.6 8.8 98 389-491 60-181 (239)
213 1zq9_A Probable dimethyladenos 98.8 9.4E-09 3.2E-13 109.0 9.5 109 372-488 15-144 (285)
214 3cbg_A O-methyltransferase; cy 98.8 9.9E-09 3.4E-13 105.0 9.1 98 390-492 73-183 (232)
215 2yxl_A PH0851 protein, 450AA l 98.8 2.5E-08 8.4E-13 112.4 13.0 106 388-494 258-392 (450)
216 3ajd_A Putative methyltransfer 98.8 1.3E-08 4.4E-13 107.0 9.8 107 388-495 82-215 (274)
217 1mjf_A Spermidine synthase; sp 98.8 1.2E-08 3.9E-13 108.0 9.4 100 389-491 75-193 (281)
218 4azs_A Methyltransferase WBDD; 98.8 3.3E-09 1.1E-13 122.9 5.7 101 389-492 66-174 (569)
219 2qm3_A Predicted methyltransfe 98.8 3.8E-08 1.3E-12 108.0 13.6 100 389-492 172-279 (373)
220 2b78_A Hypothetical protein SM 98.8 4.2E-08 1.5E-12 108.4 13.9 106 389-495 212-335 (385)
221 3tm4_A TRNA (guanine N2-)-meth 98.8 2.3E-08 7.8E-13 110.0 11.6 100 389-490 217-329 (373)
222 2avd_A Catechol-O-methyltransf 98.8 1.5E-08 5.2E-13 102.1 9.2 99 389-492 69-180 (229)
223 3c3y_A Pfomt, O-methyltransfer 98.8 1.3E-08 4.6E-13 104.6 8.9 99 389-492 70-182 (237)
224 1zg3_A Isoflavanone 4'-O-methy 98.7 1.8E-08 6E-13 109.6 9.7 94 389-493 193-295 (358)
225 1sqg_A SUN protein, FMU protei 98.7 3E-08 1E-12 110.9 11.3 106 388-494 245-377 (429)
226 4a6d_A Hydroxyindole O-methylt 98.7 6.2E-08 2.1E-12 105.6 13.5 103 389-495 179-287 (353)
227 3c0k_A UPF0064 protein YCCW; P 98.7 6.1E-08 2.1E-12 107.2 12.9 106 389-495 220-343 (396)
228 2as0_A Hypothetical protein PH 98.7 3.7E-08 1.3E-12 108.9 11.0 105 389-494 217-338 (396)
229 3m6w_A RRNA methylase; rRNA me 98.7 1.6E-08 5.4E-13 114.7 8.0 107 388-495 100-233 (464)
230 1ne2_A Hypothetical protein TA 98.7 5.6E-08 1.9E-12 96.2 10.9 90 389-489 51-145 (200)
231 1wy7_A Hypothetical protein PH 98.7 1.2E-07 3.9E-12 94.1 13.1 96 389-490 49-148 (207)
232 3lec_A NADB-rossmann superfami 98.7 5.4E-08 1.8E-12 100.8 10.6 108 374-491 12-125 (230)
233 1wxx_A TT1595, hypothetical pr 98.7 2.7E-08 9.4E-13 109.5 8.8 105 389-494 209-328 (382)
234 2cmg_A Spermidine synthase; tr 98.7 3.8E-08 1.3E-12 103.5 9.4 94 389-491 72-171 (262)
235 3gnl_A Uncharacterized protein 98.7 5.8E-08 2E-12 101.4 10.5 108 374-491 12-125 (244)
236 2yx1_A Hypothetical protein MJ 98.7 1.3E-07 4.3E-12 102.6 13.6 94 389-492 195-292 (336)
237 3v97_A Ribosomal RNA large sub 98.7 5.6E-08 1.9E-12 115.5 11.3 104 389-493 539-659 (703)
238 3kr9_A SAM-dependent methyltra 98.6 1.8E-07 6E-12 96.6 12.6 107 374-491 6-119 (225)
239 3frh_A 16S rRNA methylase; met 98.6 1.2E-07 4E-12 98.9 11.3 98 388-489 104-204 (253)
240 2frx_A Hypothetical protein YE 98.6 1E-07 3.4E-12 108.6 11.7 106 389-495 117-250 (479)
241 3lcv_B Sisomicin-gentamicin re 98.6 1.8E-07 6.2E-12 98.5 12.2 97 389-489 132-234 (281)
242 2f8l_A Hypothetical protein LM 98.6 1.7E-07 6E-12 101.4 12.1 101 389-492 130-257 (344)
243 2h1r_A Dimethyladenosine trans 98.6 1.3E-07 4.6E-12 100.9 10.5 84 372-462 29-115 (299)
244 2jjq_A Uncharacterized RNA met 98.6 2.5E-07 8.5E-12 103.8 12.4 96 389-491 290-387 (425)
245 3k6r_A Putative transferase PH 98.6 2.3E-07 7.9E-12 98.6 11.3 113 365-490 107-224 (278)
246 1uwv_A 23S rRNA (uracil-5-)-me 98.5 3.9E-07 1.3E-11 102.1 13.1 108 373-490 274-388 (433)
247 2qfm_A Spermine synthase; sper 98.5 8.6E-08 2.9E-12 105.3 6.9 132 371-507 173-328 (364)
248 3m4x_A NOL1/NOP2/SUN family pr 98.5 1.5E-07 5.3E-12 106.4 8.2 107 388-495 104-238 (456)
249 2okc_A Type I restriction enzy 98.5 6.9E-07 2.4E-11 100.4 12.9 115 372-492 158-308 (445)
250 2xyq_A Putative 2'-O-methyl tr 98.5 3.9E-07 1.3E-11 97.4 10.2 91 388-493 62-173 (290)
251 1yub_A Ermam, rRNA methyltrans 98.4 1.3E-08 4.3E-13 105.2 -2.3 106 374-489 18-143 (245)
252 2ih2_A Modification methylase 98.4 7E-07 2.4E-11 98.4 11.4 108 372-493 26-166 (421)
253 3gru_A Dimethyladenosine trans 98.4 1.1E-06 3.9E-11 94.0 11.8 84 372-461 37-122 (295)
254 4dcm_A Ribosomal RNA large sub 98.4 2.4E-05 8.3E-10 86.2 21.8 95 390-491 39-136 (375)
255 1qam_A ERMC' methyltransferase 98.4 6.6E-07 2.2E-11 92.6 8.5 83 372-461 17-102 (244)
256 3bt7_A TRNA (uracil-5-)-methyl 98.3 1.3E-06 4.4E-11 95.8 9.3 95 390-492 214-327 (369)
257 3ldu_A Putative methylase; str 98.3 4.1E-06 1.4E-10 92.7 12.5 112 373-490 183-343 (385)
258 3evf_A RNA-directed RNA polyme 98.3 3.7E-06 1.3E-10 88.9 11.4 121 366-493 55-186 (277)
259 2efj_A 3,7-dimethylxanthine me 98.2 2.4E-06 8.4E-11 94.6 10.3 117 390-508 53-248 (384)
260 3b5i_A S-adenosyl-L-methionine 98.2 1.2E-06 4.2E-11 96.7 7.9 102 389-491 52-225 (374)
261 3k0b_A Predicted N6-adenine-sp 98.2 5.1E-06 1.7E-10 92.3 12.8 100 389-490 201-349 (393)
262 3tqs_A Ribosomal RNA small sub 98.2 3.5E-06 1.2E-10 88.3 10.2 83 372-461 16-104 (255)
263 3fut_A Dimethyladenosine trans 98.2 4.4E-06 1.5E-10 88.3 10.6 90 372-472 34-126 (271)
264 3ldg_A Putative uncharacterize 98.2 1.4E-05 4.7E-10 88.6 14.1 100 389-490 194-342 (384)
265 3pfg_A N-methyltransferase; N, 98.1 1.2E-06 3.9E-11 90.3 4.5 96 644-744 51-150 (263)
266 3e8s_A Putative SAM dependent 98.1 1.5E-06 5.2E-11 86.2 5.0 131 644-781 53-227 (227)
267 3dlc_A Putative S-adenosyl-L-m 98.1 1.3E-06 4.4E-11 86.2 3.5 94 646-745 46-148 (219)
268 3dmg_A Probable ribosomal RNA 98.1 6.7E-06 2.3E-10 90.9 9.1 110 645-758 235-355 (381)
269 3i9f_A Putative type 11 methyl 98.1 3.4E-06 1.2E-10 80.7 5.7 130 643-784 17-163 (170)
270 2ar0_A M.ecoki, type I restric 98.1 6.7E-06 2.3E-10 94.9 9.1 115 373-492 157-313 (541)
271 2b9e_A NOL1/NOP2/SUN domain fa 98.1 2.7E-05 9.2E-10 83.7 13.2 105 388-494 101-237 (309)
272 2xvm_A Tellurite resistance pr 98.0 1.4E-06 4.8E-11 85.0 2.7 116 644-767 33-170 (199)
273 3hnr_A Probable methyltransfer 98.0 4.9E-06 1.7E-10 82.8 6.5 133 643-781 45-212 (220)
274 2zfu_A Nucleomethylin, cerebra 98.0 8.9E-06 3E-10 80.9 8.3 121 643-781 67-191 (215)
275 1kpg_A CFA synthase;, cyclopro 98.0 1.3E-06 4.5E-11 91.0 2.1 98 644-745 65-168 (287)
276 4hg2_A Methyltransferase type 98.0 8.5E-07 2.9E-11 92.8 0.4 93 645-744 41-134 (257)
277 2p7i_A Hypothetical protein; p 98.0 1.3E-06 4.3E-11 87.9 1.6 93 645-745 44-141 (250)
278 3grz_A L11 mtase, ribosomal pr 98.0 2.8E-06 9.7E-11 84.1 4.0 112 645-767 62-182 (205)
279 3dli_A Methyltransferase; PSI- 98.0 1.2E-06 3.9E-11 89.2 0.9 94 644-744 42-139 (240)
280 1m6e_X S-adenosyl-L-methionnin 98.0 4.1E-06 1.4E-10 92.0 5.3 102 389-491 51-209 (359)
281 2dul_A N(2),N(2)-dimethylguano 98.0 6.9E-06 2.4E-10 90.8 7.1 97 390-491 48-164 (378)
282 3h2b_A SAM-dependent methyltra 98.0 4.7E-06 1.6E-10 82.0 5.2 119 644-767 42-179 (203)
283 3o4f_A Spermidine synthase; am 97.9 0.00011 3.6E-09 78.7 15.0 120 388-508 82-215 (294)
284 3hem_A Cyclopropane-fatty-acyl 97.9 2.2E-06 7.6E-11 90.3 1.8 94 644-744 73-182 (302)
285 3jwg_A HEN1, methyltransferase 97.9 6.9E-06 2.3E-10 82.0 5.0 136 643-781 29-210 (219)
286 3ofk_A Nodulation protein S; N 97.9 2.3E-06 7.8E-11 85.2 1.3 98 642-744 50-153 (216)
287 2o57_A Putative sarcosine dime 97.9 2E-06 6.9E-11 90.0 0.9 96 643-745 82-187 (297)
288 3axs_A Probable N(2),N(2)-dime 97.9 1.4E-05 4.7E-10 88.9 7.5 97 389-491 52-158 (392)
289 2i62_A Nicotinamide N-methyltr 97.9 8.3E-06 2.8E-10 83.3 5.4 121 644-766 57-235 (265)
290 4gqb_A Protein arginine N-meth 97.9 2.5E-05 8.6E-10 91.5 10.1 97 389-488 357-464 (637)
291 1y8c_A S-adenosylmethionine-de 97.9 1.2E-05 4E-10 80.9 6.3 96 644-744 38-141 (246)
292 3dh0_A SAM dependent methyltra 97.9 6.3E-06 2.2E-10 82.0 4.3 132 643-781 37-193 (219)
293 1dus_A MJ0882; hypothetical pr 97.9 2.7E-06 9.3E-11 82.1 1.2 110 643-759 52-172 (194)
294 3hm2_A Precorrin-6Y C5,15-meth 97.9 1.1E-05 3.8E-10 77.3 5.5 114 643-765 25-148 (178)
295 1xtp_A LMAJ004091AAA; SGPP, st 97.9 1.3E-06 4.3E-11 89.0 -1.3 120 643-766 93-234 (254)
296 3f4k_A Putative methyltransfer 97.9 2E-06 6.8E-11 87.8 0.2 94 644-745 47-150 (257)
297 1qyr_A KSGA, high level kasuga 97.9 1.1E-05 3.9E-10 84.2 5.9 83 372-461 8-98 (252)
298 3kkz_A Uncharacterized protein 97.9 3E-06 1E-10 87.5 1.3 95 643-745 46-150 (267)
299 3uzu_A Ribosomal RNA small sub 97.9 2.7E-05 9.2E-10 82.6 8.6 82 372-461 29-122 (279)
300 1xxl_A YCGJ protein; structura 97.8 3.8E-06 1.3E-10 85.5 1.9 96 643-745 21-124 (239)
301 3hp7_A Hemolysin, putative; st 97.8 1.6E-05 5.5E-10 84.9 6.8 113 645-767 87-229 (291)
302 1vl5_A Unknown conserved prote 97.8 3.8E-06 1.3E-10 86.3 1.7 95 643-744 37-139 (260)
303 3ftd_A Dimethyladenosine trans 97.8 4.2E-05 1.4E-09 79.7 9.6 106 372-490 18-130 (249)
304 2yqz_A Hypothetical protein TT 97.8 3.1E-06 1.1E-10 86.3 1.0 95 643-744 39-140 (263)
305 3e23_A Uncharacterized protein 97.8 3.1E-06 1.1E-10 84.0 0.7 117 644-766 44-178 (211)
306 3ocj_A Putative exported prote 97.8 8.8E-06 3E-10 86.1 4.2 134 644-781 119-304 (305)
307 3thr_A Glycine N-methyltransfe 97.8 3E-06 1E-10 88.5 0.4 99 643-745 57-175 (293)
308 3ccf_A Cyclopropane-fatty-acyl 97.8 6.5E-06 2.2E-10 85.6 2.8 94 643-744 57-153 (279)
309 3v97_A Ribosomal RNA large sub 97.8 0.00011 3.8E-09 87.3 13.7 102 389-491 190-347 (703)
310 2fk8_A Methoxy mycolic acid sy 97.8 5E-06 1.7E-10 88.2 1.9 97 644-744 91-193 (318)
311 1nkv_A Hypothetical protein YJ 97.8 2.1E-06 7.1E-11 87.6 -1.0 94 644-745 37-140 (256)
312 3cc8_A Putative methyltransfer 97.8 4.4E-06 1.5E-10 83.0 1.1 96 643-744 32-129 (230)
313 3ou2_A SAM-dependent methyltra 97.8 1E-05 3.4E-10 80.0 3.5 97 644-746 47-147 (218)
314 3bus_A REBM, methyltransferase 97.8 3.4E-06 1.2E-10 87.0 -0.1 96 643-745 61-166 (273)
315 3sm3_A SAM-dependent methyltra 97.8 4.6E-06 1.6E-10 83.3 0.7 98 644-745 31-141 (235)
316 3khk_A Type I restriction-modi 97.8 6.7E-05 2.3E-09 86.7 10.5 116 371-492 231-396 (544)
317 2r6z_A UPF0341 protein in RSP 97.7 6E-06 2.1E-10 86.5 1.5 73 389-462 83-170 (258)
318 2gs9_A Hypothetical protein TT 97.7 7.4E-06 2.5E-10 81.1 2.0 93 644-745 37-132 (211)
319 1xdz_A Methyltransferase GIDB; 97.7 2.7E-05 9.2E-10 79.5 5.9 133 643-785 70-223 (240)
320 3lkd_A Type I restriction-modi 97.7 0.00012 3.9E-09 84.7 11.8 120 372-492 204-359 (542)
321 3orh_A Guanidinoacetate N-meth 97.7 6.9E-06 2.4E-10 84.2 1.4 98 645-744 62-169 (236)
322 3l8d_A Methyltransferase; stru 97.7 7.2E-06 2.5E-10 82.7 1.4 116 644-766 54-196 (242)
323 3ege_A Putative methyltransfer 97.7 8.9E-06 3E-10 84.0 2.1 95 643-744 34-129 (261)
324 4dzr_A Protein-(glutamine-N5) 97.7 1.1E-05 3.7E-10 79.3 2.6 137 643-781 30-205 (215)
325 3g5t_A Trans-aconitate 3-methy 97.7 9.6E-06 3.3E-10 85.3 2.3 93 643-743 36-147 (299)
326 3g5l_A Putative S-adenosylmeth 97.7 6.9E-06 2.4E-10 83.8 1.2 97 643-745 44-145 (253)
327 3cgg_A SAM-dependent methyltra 97.7 1.5E-05 5.1E-10 76.9 3.4 120 643-767 46-172 (195)
328 4htf_A S-adenosylmethionine-de 97.7 4.8E-06 1.6E-10 86.8 -0.1 94 645-745 70-173 (285)
329 3ujc_A Phosphoethanolamine N-m 97.7 3.6E-06 1.2E-10 85.9 -1.1 98 643-745 55-159 (266)
330 2nxc_A L11 mtase, ribosomal pr 97.7 1.7E-05 5.8E-10 82.3 3.6 112 645-767 122-241 (254)
331 2kw5_A SLR1183 protein; struct 97.7 1.8E-05 6E-10 77.9 3.3 112 646-766 32-167 (202)
332 3eey_A Putative rRNA methylase 97.7 4.1E-05 1.4E-09 75.1 6.0 135 645-782 24-189 (197)
333 1vlm_A SAM-dependent methyltra 97.7 1.4E-05 4.7E-10 80.2 2.3 90 644-744 48-138 (219)
334 1zx0_A Guanidinoacetate N-meth 97.7 8.3E-06 2.9E-10 82.8 0.7 99 645-745 62-170 (236)
335 3gu3_A Methyltransferase; alph 97.6 1.1E-05 3.7E-10 84.5 1.5 96 643-746 22-127 (284)
336 3lcc_A Putative methyl chlorid 97.6 4E-05 1.4E-09 77.4 5.6 117 645-767 68-204 (235)
337 3mgg_A Methyltransferase; NYSG 97.6 9.1E-06 3.1E-10 84.0 0.6 95 644-745 38-142 (276)
338 3mti_A RRNA methylase; SAM-dep 97.6 3.2E-05 1.1E-09 75.0 4.4 119 645-766 24-165 (185)
339 4e2x_A TCAB9; kijanose, tetron 97.6 4.6E-06 1.6E-10 92.1 -1.9 119 643-767 107-250 (416)
340 3bkw_A MLL3908 protein, S-aden 97.6 1.2E-05 4E-10 81.0 1.2 97 643-745 43-144 (243)
341 3d2l_A SAM-dependent methyltra 97.6 9.8E-06 3.3E-10 81.6 0.6 94 645-744 35-136 (243)
342 3gcz_A Polyprotein; flavivirus 97.6 6.4E-05 2.2E-09 79.6 6.7 120 366-493 71-203 (282)
343 2ex4_A Adrenal gland protein A 97.6 1.2E-05 4.2E-10 81.6 1.1 121 643-767 79-222 (241)
344 3e05_A Precorrin-6Y C5,15-meth 97.6 2.3E-05 8E-10 77.5 3.0 113 644-766 41-164 (204)
345 3bgv_A MRNA CAP guanine-N7 met 97.6 6.6E-06 2.3E-10 87.3 -1.2 102 643-746 34-156 (313)
346 2aot_A HMT, histamine N-methyl 97.6 9.9E-06 3.4E-10 85.1 0.2 96 645-744 54-171 (292)
347 3ua3_A Protein arginine N-meth 97.6 7.6E-05 2.6E-09 87.9 7.5 95 390-488 410-531 (745)
348 2avn_A Ubiquinone/menaquinone 97.6 1.5E-05 5.1E-10 82.2 1.3 97 643-745 54-152 (260)
349 3duw_A OMT, O-methyltransferas 97.6 3.9E-05 1.3E-09 76.8 4.3 130 643-781 58-222 (223)
350 1m6y_A S-adenosyl-methyltransf 97.6 4E-05 1.4E-09 82.2 4.6 73 388-461 25-106 (301)
351 3s1s_A Restriction endonucleas 97.6 0.0002 6.7E-09 85.6 10.7 104 389-492 321-466 (878)
352 3jwh_A HEN1; methyltransferase 97.6 2.1E-05 7.1E-10 78.5 2.1 102 643-748 29-144 (217)
353 1jsx_A Glucose-inhibited divis 97.6 2.1E-05 7.2E-10 77.6 2.1 124 645-781 67-205 (207)
354 3q87_B N6 adenine specific DNA 97.6 0.00011 3.8E-09 71.2 7.2 126 645-779 25-160 (170)
355 4fsd_A Arsenic methyltransfera 97.5 1.3E-05 4.5E-10 88.0 0.5 96 644-745 84-203 (383)
356 3m70_A Tellurite resistance pr 97.5 1.8E-05 6.2E-10 82.5 1.5 117 643-767 120-257 (286)
357 3ntv_A MW1564 protein; rossman 97.5 4.2E-05 1.4E-09 77.8 4.1 129 643-781 71-231 (232)
358 1nt2_A Fibrillarin-like PRE-rR 97.5 4.1E-05 1.4E-09 77.3 4.0 92 645-744 59-160 (210)
359 3opn_A Putative hemolysin; str 97.5 2.8E-05 9.7E-10 80.0 2.8 113 645-767 39-181 (232)
360 2pxx_A Uncharacterized protein 97.5 3.1E-05 1.1E-09 76.2 2.9 120 644-767 43-182 (215)
361 1l3i_A Precorrin-6Y methyltran 97.5 2.6E-05 8.9E-10 75.0 2.3 112 644-765 34-155 (192)
362 3bxo_A N,N-dimethyltransferase 97.5 1.1E-05 3.8E-10 81.0 -0.4 98 643-745 40-141 (239)
363 3g2m_A PCZA361.24; SAM-depende 97.5 1.3E-05 4.3E-10 84.4 -0.0 95 646-745 85-190 (299)
364 3dtn_A Putative methyltransfer 97.5 1.2E-05 4E-10 81.0 -0.3 96 644-745 45-148 (234)
365 2bm8_A Cephalosporin hydroxyla 97.5 6.7E-05 2.3E-09 77.0 5.4 115 644-765 82-214 (236)
366 2g72_A Phenylethanolamine N-me 97.5 1.7E-05 5.8E-10 83.0 0.9 81 704-784 173-282 (289)
367 3ll7_A Putative methyltransfer 97.5 6.8E-05 2.3E-09 83.8 5.7 106 390-496 94-214 (410)
368 2p8j_A S-adenosylmethionine-de 97.5 2E-05 6.7E-10 77.7 1.2 97 644-745 24-128 (209)
369 3mcz_A O-methyltransferase; ad 97.5 6.3E-05 2.2E-09 80.9 5.3 138 639-781 174-349 (352)
370 2p35_A Trans-aconitate 2-methy 97.5 1.6E-05 5.4E-10 81.0 0.4 95 643-745 33-132 (259)
371 2yxd_A Probable cobalt-precorr 97.5 4.2E-05 1.4E-09 73.1 3.4 109 645-767 37-154 (183)
372 3u81_A Catechol O-methyltransf 97.5 4.1E-05 1.4E-09 77.0 3.5 129 643-781 58-213 (221)
373 1ri5_A MRNA capping enzyme; me 97.5 1.3E-05 4.4E-10 83.3 -0.4 99 644-745 65-174 (298)
374 3lpm_A Putative methyltransfer 97.5 0.0001 3.6E-09 76.0 6.3 121 644-766 50-197 (259)
375 3tfw_A Putative O-methyltransf 97.5 0.00012 4E-09 75.4 6.6 130 643-781 63-225 (248)
376 3g89_A Ribosomal RNA small sub 97.5 4.2E-05 1.5E-09 79.3 3.2 162 615-785 36-233 (249)
377 3evz_A Methyltransferase; NYSG 97.5 7.2E-05 2.4E-09 75.1 4.8 121 644-767 56-203 (230)
378 3vc1_A Geranyl diphosphate 2-C 97.5 1.7E-05 5.9E-10 84.1 0.2 95 642-744 116-220 (312)
379 3g07_A 7SK snRNA methylphospha 97.5 1.1E-05 3.8E-10 85.1 -1.2 43 702-744 174-219 (292)
380 1ej0_A FTSJ; methyltransferase 97.5 7E-05 2.4E-09 70.5 4.3 126 644-780 23-177 (180)
381 2b3t_A Protein methyltransfera 97.5 3.8E-05 1.3E-09 80.1 2.6 132 645-780 111-275 (276)
382 3q7e_A Protein arginine N-meth 97.5 2.9E-05 1E-09 84.4 1.8 96 644-743 67-171 (349)
383 3dp7_A SAM-dependent methyltra 97.5 2.9E-05 9.9E-10 84.6 1.7 100 642-745 178-287 (363)
384 3m33_A Uncharacterized protein 97.5 1.5E-05 5.2E-10 80.5 -0.5 108 645-764 50-161 (226)
385 3tr6_A O-methyltransferase; ce 97.5 4.6E-05 1.6E-09 76.3 2.9 128 643-781 64-224 (225)
386 2plw_A Ribosomal RNA methyltra 97.4 6.1E-05 2.1E-09 73.9 3.8 126 645-780 24-195 (201)
387 3njr_A Precorrin-6Y methylase; 97.4 5.8E-05 2E-09 75.5 3.5 111 644-766 56-176 (204)
388 4auk_A Ribosomal RNA large sub 97.4 0.0018 6.3E-08 71.2 15.4 85 388-484 210-296 (375)
389 1yzh_A TRNA (guanine-N(7)-)-me 97.4 4.8E-05 1.6E-09 76.0 2.5 118 645-766 43-178 (214)
390 3i53_A O-methyltransferase; CO 97.4 4.4E-05 1.5E-09 81.7 2.3 100 639-745 165-274 (332)
391 3eld_A Methyltransferase; flav 97.4 0.00024 8.2E-09 75.8 7.8 121 366-493 62-193 (300)
392 2a14_A Indolethylamine N-methy 97.4 4E-05 1.4E-09 79.5 1.4 42 704-745 155-197 (263)
393 3r0q_C Probable protein argini 97.4 5.6E-05 1.9E-09 83.1 2.4 97 644-744 64-168 (376)
394 2frn_A Hypothetical protein PH 97.4 5.5E-05 1.9E-09 79.5 2.3 111 645-766 127-253 (278)
395 3cvo_A Methyltransferase-like 97.3 0.0015 5.2E-08 66.2 12.5 92 390-490 31-153 (202)
396 2oyr_A UPF0341 protein YHIQ; a 97.3 0.00013 4.4E-09 76.7 4.7 93 391-485 90-194 (258)
397 3r3h_A O-methyltransferase, SA 97.3 0.00021 7.3E-09 73.6 6.3 132 642-781 59-220 (242)
398 3c6k_A Spermine synthase; sper 97.3 0.00018 6E-09 79.5 5.9 118 371-491 190-331 (381)
399 2fca_A TRNA (guanine-N(7)-)-me 97.3 0.00011 3.7E-09 74.0 3.8 116 645-764 40-173 (213)
400 1ve3_A Hypothetical protein PH 97.3 4.2E-05 1.4E-09 76.1 0.7 98 644-746 39-143 (227)
401 3lst_A CALO1 methyltransferase 97.3 4.2E-05 1.4E-09 82.6 0.8 99 639-745 180-286 (348)
402 3c3p_A Methyltransferase; NP_9 97.3 9.1E-05 3.1E-09 73.6 2.9 93 643-745 56-160 (210)
403 3dou_A Ribosomal RNA large sub 97.3 1.5E-05 5.1E-10 79.4 -2.9 129 644-781 26-181 (191)
404 1wzn_A SAM-dependent methyltra 97.3 4.7E-05 1.6E-09 77.4 0.7 97 643-744 41-144 (252)
405 2vdw_A Vaccinia virus capping 97.3 5.2E-05 1.8E-09 81.0 1.0 100 645-746 50-170 (302)
406 1g6q_1 HnRNP arginine N-methyl 97.3 6.5E-05 2.2E-09 80.9 1.7 96 644-743 39-143 (328)
407 2qy6_A UPF0209 protein YFCK; s 97.3 0.00022 7.5E-09 74.7 5.7 101 388-489 59-211 (257)
408 2esr_A Methyltransferase; stru 97.2 2.7E-05 9.1E-10 75.1 -1.6 98 644-747 32-140 (177)
409 2ip2_A Probable phenazine-spec 97.2 0.00011 3.7E-09 78.5 2.9 99 640-745 165-272 (334)
410 2gb4_A Thiopurine S-methyltran 97.2 7.5E-05 2.6E-09 77.7 1.5 117 645-767 70-224 (252)
411 1pjz_A Thiopurine S-methyltran 97.2 4.2E-05 1.4E-09 76.4 -0.6 117 645-766 24-172 (203)
412 2p41_A Type II methyltransfera 97.2 0.00017 5.8E-09 77.3 4.1 96 644-744 83-190 (305)
413 3bkx_A SAM-dependent methyltra 97.2 0.00019 6.6E-09 73.8 4.2 98 644-744 44-158 (275)
414 1qzz_A RDMB, aclacinomycin-10- 97.2 0.00028 9.6E-09 76.4 5.4 136 640-782 179-357 (374)
415 3ggd_A SAM-dependent methyltra 97.2 5.1E-05 1.7E-09 77.0 -0.4 98 644-745 57-163 (245)
416 4gek_A TRNA (CMO5U34)-methyltr 97.2 4.9E-05 1.7E-09 79.5 -0.8 96 646-745 73-178 (261)
417 1ws6_A Methyltransferase; stru 97.1 3.7E-05 1.3E-09 72.9 -1.8 94 645-746 43-148 (171)
418 1vbf_A 231AA long hypothetical 97.1 4.1E-05 1.4E-09 77.0 -1.7 90 644-746 71-166 (231)
419 1tw3_A COMT, carminomycin 4-O- 97.1 0.00037 1.3E-08 75.2 5.6 100 640-746 180-289 (360)
420 1x19_A CRTF-related protein; m 97.1 0.00041 1.4E-08 75.0 5.9 99 640-745 187-295 (359)
421 3dxy_A TRNA (guanine-N(7)-)-me 97.1 0.00015 5E-09 73.7 2.2 117 644-764 35-171 (218)
422 2wk1_A NOVP; transferase, O-me 97.1 0.0029 1E-07 67.2 12.2 113 389-508 106-258 (282)
423 2ipx_A RRNA 2'-O-methyltransfe 97.1 0.00016 5.6E-09 73.1 2.1 116 645-766 79-213 (233)
424 3gwz_A MMCR; methyltransferase 97.1 0.0003 1E-08 76.7 4.3 135 639-780 198-368 (369)
425 1g8a_A Fibrillarin-like PRE-rR 97.1 0.00018 6.1E-09 72.3 2.2 126 645-781 75-227 (227)
426 3p9n_A Possible methyltransfer 97.0 8.3E-05 2.8E-09 72.7 -0.4 98 645-746 46-154 (189)
427 2gpy_A O-methyltransferase; st 97.0 8.5E-05 2.9E-09 75.1 -0.6 95 643-745 54-160 (233)
428 2r3s_A Uncharacterized protein 97.0 0.00025 8.4E-09 75.4 2.8 97 642-744 164-270 (335)
429 3cbg_A O-methyltransferase; cy 97.0 0.00017 6E-09 73.3 1.3 128 643-781 72-232 (232)
430 2k4m_A TR8_protein, UPF0146 pr 97.0 0.002 6.7E-08 62.3 8.5 84 390-496 36-125 (153)
431 3id6_C Fibrillarin-like rRNA/T 97.0 0.00022 7.4E-09 73.8 2.0 94 645-744 78-180 (232)
432 2fyt_A Protein arginine N-meth 97.0 0.00015 5.3E-09 78.5 0.9 95 644-742 65-168 (340)
433 3fpf_A Mtnas, putative unchara 97.0 0.00014 4.7E-09 78.0 0.4 124 643-780 122-263 (298)
434 2ift_A Putative methylase HI07 96.9 0.00017 5.7E-09 71.8 0.7 125 645-780 55-193 (201)
435 2oxt_A Nucleoside-2'-O-methylt 96.9 8.4E-05 2.9E-09 78.1 -1.5 96 644-744 75-184 (265)
436 3iv6_A Putative Zn-dependent a 96.9 0.0002 6.9E-09 75.3 1.2 96 644-744 46-147 (261)
437 3ufb_A Type I restriction-modi 96.9 0.0067 2.3E-07 69.8 13.9 117 371-492 203-363 (530)
438 3lbf_A Protein-L-isoaspartate 96.9 8.1E-05 2.8E-09 73.7 -2.0 90 643-745 77-174 (210)
439 2nyu_A Putative ribosomal RNA 96.9 0.00018 6.1E-09 70.1 0.5 93 645-744 24-144 (196)
440 2px2_A Genome polyprotein [con 96.9 0.0041 1.4E-07 65.2 10.4 118 366-492 54-184 (269)
441 3ckk_A TRNA (guanine-N(7)-)-me 96.8 0.00046 1.6E-08 70.9 2.9 117 645-765 48-190 (235)
442 2fhp_A Methylase, putative; al 96.8 0.00012 4.2E-09 70.5 -1.6 95 645-745 46-154 (187)
443 2avd_A Catechol-O-methyltransf 96.8 0.00066 2.3E-08 67.9 3.6 128 643-781 69-229 (229)
444 1p91_A Ribosomal RNA large sub 96.7 0.00018 6.1E-09 74.1 -0.9 88 644-745 86-178 (269)
445 2y1w_A Histone-arginine methyl 96.7 0.00038 1.3E-08 75.5 1.6 95 644-744 51-154 (348)
446 2vdv_E TRNA (guanine-N(7)-)-me 96.7 0.00028 9.6E-09 72.2 0.5 114 644-761 50-190 (246)
447 1fp1_D Isoliquiritigenin 2'-O- 96.7 0.00017 5.8E-09 78.6 -1.3 97 641-745 207-306 (372)
448 1nv8_A HEMK protein; class I a 96.7 0.00049 1.7E-08 72.7 2.2 129 645-781 125-282 (284)
449 3gdh_A Trimethylguanosine synt 96.7 4.7E-05 1.6E-09 77.2 -5.6 94 644-745 79-181 (241)
450 2hnk_A SAM-dependent O-methylt 96.7 0.00049 1.7E-08 69.9 1.9 128 643-782 60-232 (239)
451 3dr5_A Putative O-methyltransf 96.7 0.00053 1.8E-08 69.7 2.1 128 646-782 59-214 (221)
452 4fzv_A Putative methyltransfer 96.7 0.0047 1.6E-07 67.8 9.7 108 388-496 147-289 (359)
453 3mb5_A SAM-dependent methyltra 96.7 0.0004 1.4E-08 70.9 1.0 106 643-761 93-211 (255)
454 1sui_A Caffeoyl-COA O-methyltr 96.6 0.00074 2.5E-08 69.7 2.8 93 643-744 79-189 (247)
455 3p2e_A 16S rRNA methylase; met 96.6 0.00037 1.3E-08 71.1 0.3 97 644-743 25-137 (225)
456 1fbn_A MJ fibrillarin homologu 96.6 0.00074 2.5E-08 68.3 2.4 90 645-743 76-176 (230)
457 2yvl_A TRMI protein, hypotheti 96.6 0.00087 3E-08 67.7 2.8 106 644-763 92-208 (248)
458 2ozv_A Hypothetical protein AT 96.6 0.00083 2.9E-08 69.7 2.7 118 644-764 37-188 (260)
459 2fpo_A Methylase YHHF; structu 96.6 0.0005 1.7E-08 68.4 0.9 126 645-780 56-191 (202)
460 1i1n_A Protein-L-isoaspartate 96.5 0.00013 4.4E-09 73.1 -3.4 88 645-745 79-182 (226)
461 2pwy_A TRNA (adenine-N(1)-)-me 96.5 0.00066 2.3E-08 69.0 1.8 109 643-764 96-218 (258)
462 3c3y_A Pfomt, O-methyltransfer 96.5 0.00088 3E-08 68.5 2.6 129 643-782 70-237 (237)
463 2pjd_A Ribosomal RNA small sub 96.5 0.00036 1.2E-08 75.4 -0.3 111 645-758 198-318 (343)
464 3lkz_A Non-structural protein 96.5 0.029 1E-06 59.8 14.1 119 366-494 75-207 (321)
465 3reo_A (ISO)eugenol O-methyltr 96.5 0.00056 1.9E-08 74.7 1.0 95 641-745 201-300 (368)
466 3p9c_A Caffeic acid O-methyltr 96.5 0.00061 2.1E-08 74.3 1.0 95 641-745 199-298 (364)
467 3p8z_A Mtase, non-structural p 96.4 0.0074 2.5E-07 62.6 8.8 119 366-495 59-190 (267)
468 3a27_A TYW2, uncharacterized p 96.4 0.0011 3.8E-08 69.3 2.8 109 644-765 120-246 (272)
469 3mq2_A 16S rRNA methyltransfer 96.4 0.00041 1.4E-08 69.0 -0.5 115 644-766 28-180 (218)
470 2ld4_A Anamorsin; methyltransf 96.4 0.0015 5E-08 62.9 3.4 82 703-787 61-174 (176)
471 1o9g_A RRNA methyltransferase; 96.4 0.00051 1.7E-08 70.3 0.1 44 704-747 167-216 (250)
472 1fp2_A Isoflavone O-methyltran 96.4 0.00065 2.2E-08 73.3 0.8 96 640-745 185-288 (352)
473 3sso_A Methyltransferase; macr 96.4 0.00042 1.4E-08 77.2 -0.8 142 643-795 216-414 (419)
474 2wa2_A Non-structural protein 96.4 0.00078 2.7E-08 71.2 1.1 96 644-744 83-192 (276)
475 1mjf_A Spermidine synthase; sp 96.2 0.0016 5.4E-08 68.6 2.6 135 643-781 75-239 (281)
476 2yxe_A Protein-L-isoaspartate 96.2 0.0004 1.4E-08 68.9 -2.0 88 645-745 79-177 (215)
477 1r18_A Protein-L-isoaspartate( 96.2 0.00034 1.2E-08 70.4 -2.6 87 645-745 86-194 (227)
478 1inl_A Spermidine synthase; be 96.2 0.0022 7.6E-08 68.1 3.4 136 644-782 91-253 (296)
479 1o54_A SAM-dependent O-methylt 96.2 0.0019 6.5E-08 67.1 2.8 108 644-764 113-233 (277)
480 4df3_A Fibrillarin-like rRNA/T 96.2 0.00038 1.3E-08 72.1 -2.6 94 646-744 80-181 (233)
481 1yb2_A Hypothetical protein TA 96.1 0.0011 3.8E-08 69.0 0.8 109 643-764 110-231 (275)
482 1ixk_A Methyltransferase; open 96.1 0.0014 4.7E-08 70.2 1.4 115 645-763 120-268 (315)
483 3b3j_A Histone-arginine methyl 96.1 0.00067 2.3E-08 77.1 -1.3 94 644-743 159-261 (480)
484 3bwc_A Spermidine synthase; SA 96.1 0.002 7E-08 68.6 2.3 137 643-781 95-258 (304)
485 3adn_A Spermidine synthase; am 96.1 0.0046 1.6E-07 65.8 5.1 100 642-744 82-197 (294)
486 3htx_A HEN1; HEN1, small RNA m 96.0 0.002 6.9E-08 77.3 2.3 100 643-744 721-833 (950)
487 2pt6_A Spermidine synthase; tr 96.0 0.0028 9.7E-08 68.2 3.1 137 643-782 116-278 (321)
488 2igt_A SAM dependent methyltra 96.0 0.0016 5.6E-08 70.4 1.2 118 645-765 155-299 (332)
489 1jg1_A PIMT;, protein-L-isoasp 96.0 0.00056 1.9E-08 69.3 -2.4 88 643-745 91-189 (235)
490 2qe6_A Uncharacterized protein 96.0 0.003 1E-07 66.2 3.1 101 643-746 77-197 (274)
491 1i9g_A Hypothetical protein RV 96.0 0.0024 8.2E-08 66.0 2.3 107 644-762 100-222 (280)
492 1zg3_A Isoflavanone 4'-O-methy 95.9 0.0011 3.9E-08 71.6 -0.3 95 640-744 190-292 (358)
493 2pbf_A Protein-L-isoaspartate 95.9 0.00042 1.4E-08 69.5 -3.7 88 645-744 82-192 (227)
494 2xyq_A Putative 2'-O-methyl tr 95.8 0.0087 3E-07 63.8 6.1 124 645-780 65-210 (290)
495 1iy9_A Spermidine synthase; ro 95.8 0.0066 2.2E-07 63.7 5.0 137 643-782 75-237 (275)
496 3bzb_A Uncharacterized protein 95.8 0.0017 5.7E-08 68.2 0.1 94 645-743 81-203 (281)
497 2b2c_A Spermidine synthase; be 95.7 0.004 1.4E-07 66.9 3.0 136 643-781 108-269 (314)
498 1dl5_A Protein-L-isoaspartate 95.7 0.00077 2.6E-08 71.9 -2.7 92 645-746 77-176 (317)
499 1uir_A Polyamine aminopropyltr 95.7 0.0039 1.3E-07 66.8 2.7 137 643-782 77-243 (314)
500 3gjy_A Spermidine synthase; AP 95.6 0.0076 2.6E-07 65.0 4.5 135 645-783 91-249 (317)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=3.4e-15 Score=156.77 Aligned_cols=120 Identities=23% Similarity=0.280 Sum_probs=93.2
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
..++.|.+..+ ...+|||||||+|.++..|+.+ +|+|+|+++.|+..|+ +...+.+.+++++.+|+
T Consensus 28 ~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~------~~~~v~~~~~~~e~~~~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL------RHPRVTYAVAPAEDTGL 95 (257)
T ss_dssp HHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC------CCTTEEEEECCTTCCCC
T ss_pred HHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh------hcCCceeehhhhhhhcc
Confidence 34555665554 2579999999999999999986 8999999998875543 23456788889999999
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHH
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIW 505 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~ 505 (796)
++++||+|+|..+ +||. ++..+|.+++|+|||||+|++.........+++....
T Consensus 96 ~~~sfD~v~~~~~-~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~ 149 (257)
T 4hg2_A 96 PPASVDVAIAAQA-MHWF-DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVV 149 (257)
T ss_dssp CSSCEEEEEECSC-CTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHH
T ss_pred cCCcccEEEEeee-hhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHH
Confidence 9999999999875 6765 7889999999999999999876443333344444433
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.59 E-value=5.2e-15 Score=152.80 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=91.5
Q ss_pred HHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCCCC
Q 003776 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPG 451 (796)
Q Consensus 375 d~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPfpd 451 (796)
..+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++ +.+...+++ +.+.+.+...+|+++
T Consensus 27 ~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~-~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAAL----KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVAR-AFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTC----CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCC----CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEEecHHhCCCCC
Confidence 344444442 35789999999999999999876 8999999999998887 444455544 677888889999999
Q ss_pred CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 452 ~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++||+|+|+.+ ++|..++..+|.++.|+|||||+|++...
T Consensus 102 ~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 102 ERFHIVTCRIA-AHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEhhh-hHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999999875 77777999999999999999999998744
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.58 E-value=1.9e-14 Score=149.15 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=113.8
Q ss_pred cccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEE
Q 003776 365 QFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AIS 439 (796)
Q Consensus 365 ~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~ 439 (796)
.+........+.+.+.++. .++.+|||||||+|.++..|+++ .|+++|+++.++..++ +.+...++. +.+
T Consensus 41 ~~~~~~~~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~~~~ 115 (273)
T 3bus_A 41 SVDDATDRLTDEMIALLDV----RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQAN-ARATAAGLANRVTF 115 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCC----CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEE
T ss_pred CHHHHHHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HHHHhcCCCcceEE
Confidence 4444455566667776653 45789999999999999999863 8999999999988887 344445543 677
Q ss_pred EEcCCCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHH-HHHHHHHHHHHHhhcce
Q 003776 440 AVMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPED-VEIWNAMSQLIKAMCWE 518 (796)
Q Consensus 440 ~v~d~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El-~~~~~~le~l~~~~~W~ 518 (796)
...+...+|+++++||+|++..+ +++..++..+|.++.|+|||||+|++............ ...+..+..........
T Consensus 116 ~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
T 3bus_A 116 SYADAMDLPFEDASFDAVWALES-LHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLG 194 (273)
T ss_dssp EECCTTSCCSCTTCEEEEEEESC-TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCC
T ss_pred EECccccCCCCCCCccEEEEech-hhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCC
Confidence 88888899999999999999874 66666889999999999999999998854333222221 11222221111112222
Q ss_pred eehhhhhhccceeEEEEE
Q 003776 519 LVSISKDTINKVGIAVYR 536 (796)
Q Consensus 519 ~v~~~~~~l~dvG~~L~r 536 (796)
........+...||.+.+
T Consensus 195 ~~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 195 GIDEYESDVRQAELVVTS 212 (273)
T ss_dssp CHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCeEEE
Confidence 334444456666766654
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.54 E-value=4.3e-14 Score=148.75 Aligned_cols=127 Identities=16% Similarity=0.241 Sum_probs=97.5
Q ss_pred cccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEE
Q 003776 365 QFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAIS 439 (796)
Q Consensus 365 ~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~ 439 (796)
.+........+.+.+.++......++.+|||||||+|.++..|+++ .|+++|+++.++..++.. +...++ .+.+
T Consensus 58 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~ 136 (297)
T 2o57_A 58 EIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY-NNQAGLADNITV 136 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHHTCTTTEEE
T ss_pred chHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCcceEE
Confidence 3444445555666666620001235789999999999999999874 799999999999888744 344454 3677
Q ss_pred EEcCCCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 440 AVMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 440 ~v~d~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
...+...+|+++++||+|++..+ +++..++..+|.++.|+|||||+|++..+.
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDA-FLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEcCcccCCCCCCCEeEEEecch-hhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 88888999999999999999874 555568899999999999999999988543
No 5
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.53 E-value=1.2e-13 Score=141.30 Aligned_cols=105 Identities=22% Similarity=0.272 Sum_probs=87.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++... ...++ .+.+...+...+|+++++||+|++..+ +
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFA-QEKGVENVRFQQGTAESLPFPDDSFDIITCRYA-A 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC-G
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEecccccCCCCCCcEEEEEECCc-h
Confidence 45789999999999999999875 7999999999998887444 44454 367778888899999999999999874 5
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
++..++..+|.++.|+|||||+|++.....
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 555689999999999999999999875443
No 6
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.53 E-value=2.5e-15 Score=160.15 Aligned_cols=103 Identities=20% Similarity=0.282 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHc-------CCCeEEEEcCCCCCC----CC--CC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALER-------GIPAISAVMGTERLP----FP--GI 452 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~er-------gl~~~~~v~d~e~LP----fp--d~ 452 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++....... ...+.+.+.|...++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4679999999999999988864 79999999999988876554331 124567788887775 64 45
Q ss_pred ceeEEEEcCCCcccc-c---chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 453 VFDAVHCARCRVPWH-I---EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 453 SFDlVvss~~~l~w~-~---d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+||+|+|+.+ +||. . ++..+|.++.|+|||||+|+++.+
T Consensus 114 ~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 9999999885 8887 3 457999999999999999998843
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.52 E-value=1.6e-13 Score=140.78 Aligned_cols=155 Identities=15% Similarity=0.216 Sum_probs=110.7
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e 445 (796)
......+.+.+..+ .++.+|||||||+|.++..|+++ .|+++|+++.++..++ +.+...++. +.+...+..
T Consensus 31 ~~~~~~~l~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 31 PEATRKAVSFINEL---TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFN-ENAVKANCADRVKGITGSMD 106 (257)
T ss_dssp HHHHHHHHTTSCCC---CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHHhcC---CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChh
Confidence 44455566666432 35679999999999999999875 7999999999998887 445556654 678888899
Q ss_pred CCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC--CCCCchHHHHHHHHHHHHHHhhcceeehhh
Q 003776 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP--VYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~--~~~~l~El~~~~~~le~l~~~~~W~~v~~~ 523 (796)
.+|+++++||+|++..+ ++ |.++..+|.++.|+|||||+|++..+. ...........|... ...+......
T Consensus 107 ~~~~~~~~fD~v~~~~~-l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 179 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGA-IY-NIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDA-----YPEISVIPTC 179 (257)
T ss_dssp SCSSCTTCEEEEEEESC-SC-CCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHH-----CTTCCBHHHH
T ss_pred hCCCCCCCEEEEEecCh-Hh-hcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHh-----CCCCCCHHHH
Confidence 99999999999999874 44 448999999999999999999988532 222333333444321 1112234444
Q ss_pred hhhccceeEEEEE
Q 003776 524 KDTINKVGIAVYR 536 (796)
Q Consensus 524 ~~~l~dvG~~L~r 536 (796)
...+...||.+..
T Consensus 180 ~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 180 IDKMERAGYTPTA 192 (257)
T ss_dssp HHHHHHTTEEEEE
T ss_pred HHHHHHCCCeEEE
Confidence 4566677777665
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=3.4e-13 Score=139.90 Aligned_cols=155 Identities=17% Similarity=0.182 Sum_probs=111.1
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e 445 (796)
......+...++. ..++.+|||||||+|.++..|++. .|+++|+++.++..++ +.+...++. +.+...+..
T Consensus 31 ~~~~~~~l~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 31 PEVTLKALSFIDN---LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFN-RNARQSGLQNRVTGIVGSMD 106 (267)
T ss_dssp HHHHHHHHTTCCC---CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHhccc---CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHH-HHHHHcCCCcCcEEEEcChh
Confidence 3444555566552 245789999999999999999875 7999999999998887 444555654 778888999
Q ss_pred CCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCC--CCCchHHHHHHHHHHHHHHhhcceeehhh
Q 003776 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPV--YQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~--~~~l~El~~~~~~le~l~~~~~W~~v~~~ 523 (796)
.+|+++++||+|+|..+ ++ |.++..+|.++.|+|||||+|++..... ..........|.. ...........
T Consensus 107 ~~~~~~~~fD~i~~~~~-~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 179 (267)
T 3kkz_A 107 DLPFRNEELDLIWSEGA-IY-NIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMD-----AYPEIDTIPNQ 179 (267)
T ss_dssp SCCCCTTCEEEEEESSC-GG-GTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHH-----HCTTCEEHHHH
T ss_pred hCCCCCCCEEEEEEcCC-ce-ecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHH-----hCCCCCCHHHH
Confidence 99999999999999874 44 4489999999999999999999875421 2233333333421 11123344455
Q ss_pred hhhccceeEEEEE
Q 003776 524 KDTINKVGIAVYR 536 (796)
Q Consensus 524 ~~~l~dvG~~L~r 536 (796)
...+...||.+..
T Consensus 180 ~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 180 VAKIHKAGYLPVA 192 (267)
T ss_dssp HHHHHHTTEEEEE
T ss_pred HHHHHHCCCEEEE
Confidence 5566777877765
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.50 E-value=1.6e-13 Score=144.08 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=82.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC------CeEEEeCChhhHHHHHHHHHHHcC--CCeEEEEcCCCCCCCCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALERG--IPAISAVMGTERLPFPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~------~V~gvDiSp~dl~~A~~q~A~erg--l~~~~~v~d~e~LPfpd~SFDlVvs 459 (796)
+++.+|||||||+|.++..|+++ .|+|+|+|+.|+..|+.+.. ..+ .++.+..++...+|++ .||+|++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~-~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHID-AYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHH-TSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHH-hhccCceEEEeeccccccccc--cccccee
Confidence 46889999999999999999864 69999999999999884443 333 3467788888888875 5999999
Q ss_pred cCCCccccc--chHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 460 ARCRVPWHI--EGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 460 s~~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+.+ +++.. +...+|++++|+|||||+|+++....
T Consensus 146 ~~~-l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 146 NFT-LQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp ESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eee-eeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 874 66554 33578999999999999999985433
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.50 E-value=1.3e-13 Score=141.25 Aligned_cols=116 Identities=14% Similarity=0.052 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT 444 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~ 444 (796)
....++.+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++ +.+...++. +.+...+.
T Consensus 21 ~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~-~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 21 TEEKYATLGRVLRM----KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAK-RRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp CHHHHHHHHHHTCC----CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCC
T ss_pred CHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHH-HHHHhcCCCcceEEEECCh
Confidence 34556666666653 45789999999999999988864 7999999999998887 444555653 77888888
Q ss_pred CCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 445 ERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 445 e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..+|+ +++||+|+|..+ +++..++..+|.++.|+|||||+|++..+
T Consensus 96 ~~~~~-~~~fD~V~~~~~-~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGA-TWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TTCCC-SSCEEEEEEESC-GGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCC-hHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 88888 789999999764 55555889999999999999999998753
No 11
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=2.1e-13 Score=145.35 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=103.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++ +.+...++. +.+...+...+|+++++||+|++..+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGN-RRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 45789999999999999999864 8999999999998887 445556654 77888899999999999999999874
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHhhcceeehhhhhhccceeEEEEE
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYR 536 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~le~l~~~~~W~~v~~~~~~l~dvG~~L~r 536 (796)
++ |.++..+|.++.|+|||||+|++...............+..+..... ..+.....+...+...||.+..
T Consensus 195 -l~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~l~~aGf~~~~ 265 (312)
T 3vc1_A 195 -TM-YVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFE-CNIHSRREYLRAMADNRLVPHT 265 (312)
T ss_dssp -GG-GSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHT-CCCCBHHHHHHHHHTTTEEEEE
T ss_pred -hh-hCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhc-CCCCCHHHHHHHHHHCCCEEEE
Confidence 44 44799999999999999999998753332221111122222222111 1233344555566777877655
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=1.7e-13 Score=137.38 Aligned_cols=143 Identities=12% Similarity=0.143 Sum_probs=98.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..+.+...+...+|++ ++||+|++..+ +++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~-l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-TSIDTIVSTYA-FHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-SCCSEEEEESC-GGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-CCeEEEEECcc-hhc
Confidence 4789999999999999999875 79999999988776653322 2456778888889988 99999999874 665
Q ss_pred ccchHH--HHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHH--------HHHHHhhcceeehhhhhhccceeEEEEE
Q 003776 467 HIEGGK--LLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAM--------SQLIKAMCWELVSISKDTINKVGIAVYR 536 (796)
Q Consensus 467 ~~d~~~--~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~l--------e~l~~~~~W~~v~~~~~~l~dvG~~L~r 536 (796)
..++.. +|.++.|+|||||+|++..+ ..............+ ........+.........+...||.+..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADT-IFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEE-CBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEec-cccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 556655 99999999999999999853 233222222221111 1111112333445555667778887766
Q ss_pred ec
Q 003776 537 KP 538 (796)
Q Consensus 537 kg 538 (796)
..
T Consensus 198 ~~ 199 (220)
T 3hnr_A 198 TR 199 (220)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1e-13 Score=142.30 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~ 446 (796)
.......+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++..... . ..+.+...+...
T Consensus 40 ~~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~ 113 (266)
T 3ujc_A 40 GLEATKKILSDIEL----NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG-N-NKIIFEANDILT 113 (266)
T ss_dssp HHHHHHHHTTTCCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS-C-TTEEEEECCTTT
T ss_pred hHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc-C-CCeEEEECcccc
Confidence 33444555555432 45789999999999999999874 799999999887666522211 1 456778888888
Q ss_pred CCCCCCceeEEEEcCCCcccc--cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 447 LPFPGIVFDAVHCARCRVPWH--IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~--~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+|+++++||+|++..+ +++. .++..+|.++.|+|||||+|++..+
T Consensus 114 ~~~~~~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 114 KEFPENNFDLIYSRDA-ILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CCCCTTCEEEEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcEEEEeHHHH-HHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999999999874 5555 5789999999999999999998854
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.47 E-value=2.6e-13 Score=134.72 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=86.3
Q ss_pred CEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 391 RVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 391 ~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
.+|||||||+|.++..|+++ .|+++|+++.++..++.. +...++ .+.+...+...+|+++++||+|+++.+ ++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN-IADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS-VF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC-GG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH-HHhccccCceEEEEcCHHHCCCCcccccEEEECch-Hh
Confidence 39999999999999999874 899999999999888744 444454 467888888999999999999999874 66
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 466 WHIEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 466 w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+..++..+|.++.|+|||||+|++.....
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 66788999999999999999999985443
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=1.3e-13 Score=139.51 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=80.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++..... .+.+...+...+ +++++||+|++..+ +++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~-~~~~~fD~v~~~~~-l~~ 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA-QLPRRYDNIVLTHV-LEH 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC-CCSSCEEEEEEESC-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc-CcCCcccEEEEhhH-HHh
Confidence 3668999999999999999876 899999999888776533211 566777777777 56789999999874 665
Q ss_pred ccchHHHHHHHH-hhcCCCcEEEEEeC
Q 003776 467 HIEGGKLLLELN-RVLRPGGFFIWSAT 492 (796)
Q Consensus 467 ~~d~~~~L~Ei~-RVLKPGG~fv~s~~ 492 (796)
..++..+|+++. |+|||||+|+++.+
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 568999999999 99999999999853
No 16
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=4e-13 Score=140.43 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. ...+.+.+.+...+|+ +++||+|++..+ ++|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-~~~fD~v~~~~~-l~~ 129 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQN-----YPHLHFDVADARNFRV-DKPLDAVFSNAM-LHW 129 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----CTTSCEEECCTTTCCC-SSCEEEEEEESC-GGG
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhh-----CCCCEEEECChhhCCc-CCCcCEEEEcch-hhh
Confidence 5789999999999999999864 899999999888766532 2345678888888988 579999999874 777
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHH
Q 003776 467 HIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIW 505 (796)
Q Consensus 467 ~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~ 505 (796)
..++..+|.++.|+|||||+|++.. +....+......+
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~ 167 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAEF-GGKGNIKYILEAL 167 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEE-ECTTTTHHHHHHH
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEEe-cCCcchHHHHHHH
Confidence 7799999999999999999999874 3344444444443
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.45 E-value=5.7e-13 Score=138.50 Aligned_cols=102 Identities=22% Similarity=0.333 Sum_probs=86.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++ .+.+...+...+|+++++||+|++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAREN-TEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 45789999999999999998764 799999999999888744 444555 467777888889999999999999874
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+++..++..+|.++.|+|||||+|++..
T Consensus 115 -l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 -LEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp -GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 6666688999999999999999999875
No 18
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=1.2e-13 Score=141.16 Aligned_cols=139 Identities=16% Similarity=0.199 Sum_probs=98.4
Q ss_pred cccccccCcccccCCCCccccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHH
Q 003776 347 QNWVKVTGEYLTFPGGGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEH 423 (796)
Q Consensus 347 qnW~~~~g~~~~Fpgggt~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~ 423 (796)
..|......+..+.++...+......+...+.+.++. .++.+|||||||+|.++..|+.+ .|+++|+++.++.
T Consensus 55 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~ 130 (254)
T 1xtp_A 55 EYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPG----HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLE 130 (254)
T ss_dssp HHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTSTT----CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHH
T ss_pred hHHhcCCccccceecCcCccCHHHHHHHHHHHHhhcc----cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHH
Confidence 3454444433333333333344444555556665542 35789999999999999988764 5999999999887
Q ss_pred HHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccc--cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 424 EAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH--IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 424 ~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~--~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++..... . ..+.+...+...+|+++++||+|++..+ +++. .++..+|.++.|+|||||+|++..+
T Consensus 131 ~a~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 131 EAKRELAG-M-PVGKFILASMETATLPPNTYDLIVIQWT-AIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHTTT-S-SEEEEEESCGGGCCCCSSCEEEEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcc-C-CceEEEEccHHHCCCCCCCeEEEEEcch-hhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 77633221 1 3356777788889999899999999874 5544 2578999999999999999999853
No 19
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=8.3e-13 Score=129.16 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCC-CCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP-FPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LP-fpd~SFDlVvss~~~l 464 (796)
++.+|||+|||+|.++..|+++ .|+++|+++.++..++.. +...++. +.+...+...++ +++++||+|+++..++
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQR-LSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4789999999999999999875 899999999999988744 4444543 455555555543 5578899999875434
Q ss_pred cc-------c-cchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 465 PW-------H-IEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 465 ~w-------~-~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+. + .+...+|.++.|+|||||+|++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 43 2 144678899999999999999875543
No 20
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.44 E-value=8.4e-14 Score=139.95 Aligned_cols=101 Identities=9% Similarity=-0.123 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHH------------cCCCeEEEEcCCCCCCCCC-Cc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALE------------RGIPAISAVMGTERLPFPG-IV 453 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~e------------rgl~~~~~v~d~e~LPfpd-~S 453 (796)
++.+|||+|||+|.++..|+++ .|+|+|+|+.|+..|+.+.... ....+.+.++|+..+|+++ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 4789999999999999999875 7999999999998887432210 1235678889999999875 79
Q ss_pred eeEEEEcCCCccccc--chHHHHHHHHhhcCCCcEEEEE
Q 003776 454 FDAVHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 454 FDlVvss~~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
||+|++..+ +++.. +...+|++++|+|||||++++.
T Consensus 102 fD~v~~~~~-l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 102 CAAFYDRAA-MIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp EEEEEEESC-GGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEECcc-hhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999999764 44333 3467899999999999984443
No 21
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=1.5e-12 Score=133.43 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=87.6
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
...+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. ...+.+...+...+|
T Consensus 22 ~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~- 91 (259)
T 2p35_A 22 ARDLLAQVPL----ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK- 91 (259)
T ss_dssp HHHHHTTCCC----SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-
T ss_pred HHHHHHhcCC----CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-
Confidence 3445555542 35689999999999999988754 899999999888766532 345677888888888
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++||+|+++.+ ++|..++..+|.+++|+|||||+|++..+
T Consensus 92 ~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 92 PAQKADLLYANAV-FQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CSSCEEEEEEESC-GGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCcCEEEEeCc-hhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 7889999999875 77777999999999999999999999854
No 22
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.44 E-value=3.8e-13 Score=137.95 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=85.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ......+.+...+...+|+++++||+|++..+ ++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHL-WH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESC-GG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCc-hh
Confidence 35789999999999999999875 7999999999987776443 22234567788888899999999999999874 77
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEE
Q 003776 466 WHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 466 w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
|..++..+|.++.|+|||||+|++.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 7778999999999999999999987
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.44 E-value=9.6e-13 Score=131.74 Aligned_cols=102 Identities=23% Similarity=0.235 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.++.+|||||||+|.++..|++. .|+++|+++.++..++.... ..++ .+.+...+...+++++++||+|+++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN-KLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 35779999999999999888753 79999999999988875544 3444 47778888889999999999999987
Q ss_pred CCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+ +++..++..+|.++.|+|||||+|++..
T Consensus 115 ~-l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 115 T-FHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp C-GGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred h-hhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 4 6655688999999999999999999874
No 24
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.43 E-value=4.9e-13 Score=141.34 Aligned_cols=111 Identities=16% Similarity=0.244 Sum_probs=89.7
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh---C--CeEEEeCChhhHHHHHHHHHHH--cCCCeEEEEcCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD---R--GVLTMSFAPKDEHEAQVQFALE--RGIPAISAVMGT 444 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~---~--~V~gvDiSp~dl~~A~~q~A~e--rgl~~~~~v~d~ 444 (796)
.+.+.|...+. .++.+|||||||+|.++..|++ . .|+|+|+++.++..++...... ....+.+.+.+.
T Consensus 24 ~~~~~l~~~~~-----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 98 (299)
T 3g5t_A 24 DFYKMIDEYHD-----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS 98 (299)
T ss_dssp HHHHHHHHHCC-----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT
T ss_pred HHHHHHHHHhc-----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH
Confidence 34455555443 2578999999999999999984 2 8999999999998887444332 144578888899
Q ss_pred CCCCCCC------CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEE
Q 003776 445 ERLPFPG------IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 445 e~LPfpd------~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
..++++. ++||+|+++.+ ++|. ++..+|.++.|+|||||+|++
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVEC-AHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred HhCCccccccccCCCeeEEeHhhH-HHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 9998887 89999999875 7777 999999999999999999987
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.43 E-value=9.8e-13 Score=133.23 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=87.6
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL 447 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L 447 (796)
...+.+.+.++. ..++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ...+ .+.+...+...+
T Consensus 30 ~~~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~-~~~~~~~d~~~~ 104 (234)
T 3dtn_A 30 DFYGVSVSIASV---DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF-RGNL-KVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHTCCC---SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-CSCT-TEEEEESCTTTC
T ss_pred HHHHHHHHHhhc---CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh-ccCC-CEEEEeCchhcc
Confidence 334555555553 245789999999999999998864 7999999999887776332 1222 567888888899
Q ss_pred CCCCCceeEEEEcCCCcccccchH--HHHHHHHhhcCCCcEEEEEeCC
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEGG--KLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~~--~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
|++ ++||+|++..+ +++..++. .+|.+++|+|||||+|++....
T Consensus 105 ~~~-~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 105 DFE-EKYDMVVSALS-IHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp CCC-SCEEEEEEESC-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCC-CCceEEEEeCc-cccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 888 89999999874 55554443 5999999999999999988543
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.43 E-value=1e-12 Score=138.19 Aligned_cols=116 Identities=15% Similarity=0.172 Sum_probs=93.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~ 446 (796)
.+...+.+.+..+ .++.+|||||||+|.++..|++. .|+++|+++.++..++.. +...+..+.+.+.|...
T Consensus 8 ~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 8 DYVSFLVNTVWKI---TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL-FRLLPYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHTTSCC---CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHH-HHSSSSEEEEEESCTTT
T ss_pred HHHHHHHHHHhcc---CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEEcchhh
Confidence 5566666666432 35789999999999999999864 699999999998887733 33345567788888888
Q ss_pred CCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
+|++ ++||+|++... +++..++..+|.+++|+|||||+|++..+.
T Consensus 84 ~~~~-~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IELN-DKYDIAICHAF-LLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCCS-SCEEEEEEESC-GGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCcC-CCeeEEEECCh-hhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9885 69999999874 666668899999999999999999987554
No 27
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.42 E-value=4.8e-13 Score=137.29 Aligned_cols=109 Identities=17% Similarity=0.256 Sum_probs=88.7
Q ss_pred HHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCC
Q 003776 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG 451 (796)
Q Consensus 375 d~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd 451 (796)
..+.+.++. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.... ...+.+...+...+|+++
T Consensus 34 ~~l~~~~~~----~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPD----FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhc----cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCC
Confidence 344555543 35789999999999999999875 79999999988877653322 345678888888999999
Q ss_pred CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 452 ~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
++||+|++..+ +++..++..+|+++.|+|||||+|+++.
T Consensus 107 ~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 107 DAYNVVLSSLA-LHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp TCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeEEEEEchh-hhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 99999999874 6666789999999999999999999874
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.42 E-value=1.2e-12 Score=131.51 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=84.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC------CeEEEEcCCCCCCCCCCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI------PAISAVMGTERLPFPGIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl------~~~~~v~d~e~LPfpd~SFDlVvss 460 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++ +.+...++ .+.+...+...+|+++++||+|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAE-TAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHH-HHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4789999999999999999876 8999999998887776 33333343 3567778888999999999999998
Q ss_pred CCCcccccchH---HHHHHHHhhcCCCcEEEEEeCCC
Q 003776 461 RCRVPWHIEGG---KLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 461 ~~~l~w~~d~~---~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
.+ +++..++. .+|.++.|+|||||+|++.....
T Consensus 109 ~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 109 AF-LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SC-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ch-hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 74 55555666 89999999999999999885443
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.42 E-value=4.8e-13 Score=136.65 Aligned_cols=119 Identities=14% Similarity=0.120 Sum_probs=87.7
Q ss_pred ccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCC
Q 003776 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE 445 (796)
Q Consensus 368 ~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e 445 (796)
.......+.+...++.+ .++.+|||||||+|.++..|+++ .|+++|+++.++..++ ++ +.+...+..
T Consensus 23 ~~~~~~~~~~~~~l~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~---~~~~~~d~~ 91 (240)
T 3dli_A 23 GSRELVKARLRRYIPYF---KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCE-----GK---FNVVKSDAI 91 (240)
T ss_dssp CCHHHHHHHHGGGGGGT---TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHH-----TT---SEEECSCHH
T ss_pred CCHHHHHHHHHHHHhhh---cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHH-----hh---cceeeccHH
Confidence 33344445555555542 35789999999999999998875 8999999998776554 22 456666665
Q ss_pred CC--CCCCCceeEEEEcCCCccccc--chHHHHHHHHhhcCCCcEEEEEeCCCCCCch
Q 003776 446 RL--PFPGIVFDAVHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWSATPVYQKLP 499 (796)
Q Consensus 446 ~L--Pfpd~SFDlVvss~~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~ 499 (796)
.+ |+++++||+|+|... +++.. +...+|.++.|+|||||+|++..+ ....+.
T Consensus 92 ~~~~~~~~~~fD~i~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~ 147 (240)
T 3dli_A 92 EYLKSLPDKYLDGVMISHF-VEHLDPERLFELLSLCYSKMKYSSYIVIESP-NPTSLY 147 (240)
T ss_dssp HHHHTSCTTCBSEEEEESC-GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE-CTTSHH
T ss_pred HHhhhcCCCCeeEEEECCc-hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC-CcchhH
Confidence 54 888999999999874 55555 448999999999999999998843 444433
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.42 E-value=3.3e-13 Score=137.97 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=82.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++..........+.+...+...+++++++||+|++..+ ++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV-IG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch-hh
Confidence 5789999999999999998865 7999999999988877443322122356777888888888889999999874 55
Q ss_pred cccch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 466 WHIEG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 466 w~~d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+..++ ..+|.++.|+|||||+|++..+
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 44443 4899999999999999998753
No 31
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.41 E-value=8e-13 Score=130.86 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=82.5
Q ss_pred EEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccccc-
Q 003776 392 VVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHI- 468 (796)
Q Consensus 392 ~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~~- 468 (796)
+|||||||+|.++..|+.+ .|+++|+++.++..++... ...++.+.+...+...+++++++||+|+++. .+++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLA-QEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHH-HHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 9999999999999999876 7999999999998887443 3445667778888888898889999999975 45443
Q ss_pred chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 469 EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 469 d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++..+|.++.++|||||+|++...
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 678999999999999999998853
No 32
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.41 E-value=7.5e-13 Score=134.31 Aligned_cols=109 Identities=23% Similarity=0.288 Sum_probs=88.9
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP 450 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfp 450 (796)
.++.+...++ ++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ....+.+...+...+|++
T Consensus 43 ~~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 43 IIPFFEQYVK------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp HHHHHHHHSC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHcC------CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCC
Confidence 4455555554 3679999999999999999886 7999999998876665221 234567888888999999
Q ss_pred CCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 451 GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+++||+|++..+ +++..++..+|.++.|+|||||+|++..
T Consensus 114 ~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 114 NEQFEAIMAINS-LEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp TTCEEEEEEESC-TTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccEEEEcCh-HhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 999999999874 6656688999999999999999999885
No 33
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=9.2e-13 Score=132.14 Aligned_cols=102 Identities=28% Similarity=0.333 Sum_probs=83.8
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccc
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~ 467 (796)
+.+|||||||+|.++..|+.+ .|+++|+++.++..++... ...+..+.+...+...+++++++||+|+++.++.+++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYA-KSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 679999999999999999876 7999999999998887443 4445567788888888888889999999986411333
Q ss_pred c-chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 468 I-EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 468 ~-d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. ++..+|.++.++|||||+|++..+
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 3 678999999999999999998743
No 34
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.40 E-value=8.9e-13 Score=131.90 Aligned_cols=112 Identities=14% Similarity=0.231 Sum_probs=86.3
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP 450 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfp 450 (796)
+...+...++. .++.+|||||||+|.++..|+++ .|+++|+++.++..++..... . ..+.+...+...++ +
T Consensus 39 ~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~~~-~ 111 (216)
T 3ofk_A 39 HTQLLRLSLSS----GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR-W-SHISWAATDILQFS-T 111 (216)
T ss_dssp HHHHHHHHTTT----SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-C-SSEEEEECCTTTCC-C
T ss_pred HHHHHHHHccc----CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-C-CCeEEEEcchhhCC-C
Confidence 33444444443 35679999999999999999886 899999999988777633322 2 25677888888888 6
Q ss_pred CCceeEEEEcCCCcccccch---HHHHHHHHhhcCCCcEEEEEeC
Q 003776 451 GIVFDAVHCARCRVPWHIEG---GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~~d~---~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++||+|+|+.+ +++..++ ..+|.++.|+|||||+|+++.+
T Consensus 112 ~~~fD~v~~~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 AELFDLIVVAEV-LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp SCCEEEEEEESC-GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCccEEEEccH-HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 789999999874 5555555 5779999999999999999753
No 35
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.40 E-value=3.3e-13 Score=141.08 Aligned_cols=101 Identities=15% Similarity=0.020 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHH-----------------HcCCCeEEEEcCCCCCCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFAL-----------------ERGIPAISAVMGTERLPF 449 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~-----------------ergl~~~~~v~d~e~LPf 449 (796)
++.+|||+|||+|.++..|+++ .|+|+|+|+.++..|+.+... ..+..+.+.++|+..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 4679999999999999999986 799999999999877533321 013457888899988988
Q ss_pred CC-CceeEEEEcCCCccccc--chHHHHHHHHhhcCCCcEEEEE
Q 003776 450 PG-IVFDAVHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 450 pd-~SFDlVvss~~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
++ ++||+|++..+ +++.. +...++.++.|+|||||+|++.
T Consensus 148 ~~~~~FD~V~~~~~-l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 148 ANIGKFDRIWDRGA-LVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GCCCCEEEEEESSS-TTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCEEEEEEhhh-hhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 64 89999998764 33332 4568999999999999999754
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.40 E-value=3.3e-13 Score=148.69 Aligned_cols=108 Identities=21% Similarity=0.190 Sum_probs=87.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHc----C----CCeEEEEcCCCCC------CC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER----G----IPAISAVMGTERL------PF 449 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~er----g----l~~~~~v~d~e~L------Pf 449 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++....... | ..+.+...+...+ |+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 5789999999999998888763 79999999999988875443321 3 4567788888777 99
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCCCCC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQK 497 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~ 497 (796)
++++||+|+++.. +++..++..+|.+++|+|||||+|+++.......
T Consensus 163 ~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 209 (383)
T 4fsd_A 163 PDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSDVYADRR 209 (383)
T ss_dssp CTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSC
T ss_pred CCCCEEEEEEccc-hhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccc
Confidence 9999999999874 6766799999999999999999999975444333
No 37
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.39 E-value=2.7e-12 Score=125.94 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=82.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ...++ .+.+...+...+++ +++||+|+++.+ ++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~-l~ 108 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIK-SIENLDNLHTRVVDLNNLTF-DRQYDFILSTVV-LM 108 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCTTEEEEECCGGGCCC-CCCEEEEEEESC-GG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhCCCCCcEEEEcchhhCCC-CCCceEEEEcch-hh
Confidence 4679999999999999999875 7999999999998887444 34444 56777888888888 789999999874 55
Q ss_pred ccc--chHHHHHHHHhhcCCCcEEEEEe
Q 003776 466 WHI--EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 466 w~~--d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+.. +...+|.++.|+|||||+|++..
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 444 67899999999999999988764
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=1.8e-12 Score=128.45 Aligned_cols=97 Identities=18% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccc
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~ 467 (796)
+.+|||||||+|.++..|+.+ .|+++|+++.++..++ ++...+.+...+...+|+++++||+|++..+ +++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELAR-----QTHPSVTFHHGTITDLSDSPKRWAGLLAWYS-LIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHH-----HHCTTSEEECCCGGGGGGSCCCEEEEEEESS-STTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH-----HhCCCCeEEeCcccccccCCCCeEEEEehhh-HhcC
Confidence 679999999999999999886 8999999998876655 3344567788888889999999999999874 4444
Q ss_pred c--chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 468 I--EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 468 ~--d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. ++..+|.++.|+|||||+|+++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 116 GPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp CTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3 789999999999999999998853
No 39
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.38 E-value=1.8e-12 Score=129.29 Aligned_cols=97 Identities=26% Similarity=0.292 Sum_probs=81.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~ 467 (796)
++.+|||||||+|.++..| .. .|+++|+++.++..++... ..+.+...+...+|+++++||+|++..+ +++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVVLLFTT-LEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEEEEESC-TTTC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEEEEcCh-hhhc
Confidence 4789999999999999988 55 8999999998877665332 3456777888889999999999999874 6666
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 468 IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 468 ~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++..+|.++.|+|||||+|+++.+
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 6899999999999999999999854
No 40
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.38 E-value=2.7e-12 Score=135.82 Aligned_cols=120 Identities=12% Similarity=0.181 Sum_probs=91.7
Q ss_pred ccccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eE
Q 003776 364 TQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AI 438 (796)
Q Consensus 364 t~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~ 438 (796)
..+.......++.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++. .+...++. +.
T Consensus 51 ~~l~~a~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~ 125 (302)
T 3hem_A 51 MTLEEAQYAKRKLALDKLNL----EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKA-MFDEVDSPRRKE 125 (302)
T ss_dssp CCHHHHHHHHHHHHHHTTCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHSCCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHcCC----CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceE
Confidence 33444445556666666643 45789999999999999999875 79999999999988874 44455654 56
Q ss_pred EEEcCCCCCCCCCCceeEEEEcCCCcccccch---------HHHHHHHHhhcCCCcEEEEEeC
Q 003776 439 SAVMGTERLPFPGIVFDAVHCARCRVPWHIEG---------GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 439 ~~v~d~e~LPfpd~SFDlVvss~~~l~w~~d~---------~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+...+...+ +++||+|+++.. +++..++ ..+|.++.|+|||||+|++...
T Consensus 126 ~~~~d~~~~---~~~fD~v~~~~~-~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 126 VRIQGWEEF---DEPVDRIVSLGA-FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEECCGGGC---CCCCSEEEEESC-GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEECCHHHc---CCCccEEEEcch-HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 777777665 689999999874 5555344 7999999999999999998754
No 41
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=3.7e-13 Score=138.59 Aligned_cols=114 Identities=18% Similarity=0.227 Sum_probs=84.5
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC-
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER- 446 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~- 446 (796)
..+...+.+.+. .++.+|||||||+|.++.+|+++ .|+++|+++.++..|+ +.+...+..+.+...+.+.
T Consensus 47 ~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEeehHHhh
Confidence 344455555544 35789999999999999999875 7999999999988887 4444556666666666533
Q ss_pred -CCCCCCceeEEEEcCC---Ccccc-cchHHHHHHHHhhcCCCcEEEEE
Q 003776 447 -LPFPGIVFDAVHCARC---RVPWH-IEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 447 -LPfpd~SFDlVvss~~---~l~w~-~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.++++++||.|+.-.. ...+| .++..+|.+++|+|||||+|+|.
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 3678899999985211 12223 37789999999999999999975
No 42
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=5.9e-13 Score=135.96 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~ 446 (796)
...++..+...++ .++.+|||||||+|.++..|+.. .|+++|+++.++..++. .+...+..+.+...+...
T Consensus 46 ~~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~ 119 (236)
T 1zx0_A 46 ETPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWED 119 (236)
T ss_dssp GHHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHH
T ss_pred HHHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEecCHHH
Confidence 3445555555443 25779999999999999999874 79999999999988874 333445556777777777
Q ss_pred C--CCCCCceeEEEE-cCCCcccc---c-chHHHHHHHHhhcCCCcEEEEE
Q 003776 447 L--PFPGIVFDAVHC-ARCRVPWH---I-EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 447 L--Pfpd~SFDlVvs-s~~~l~w~---~-d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+ |+++++||+|++ .+. +..+ . +...+|.+++|+|||||+|++.
T Consensus 120 ~~~~~~~~~fD~V~~d~~~-~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 120 VAPTLPDGHFDGILYDTYP-LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HGGGSCTTCEEEEEECCCC-CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred hhcccCCCceEEEEECCcc-cchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 7 899999999999 443 2211 1 3347799999999999999975
No 43
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.37 E-value=1.6e-12 Score=136.06 Aligned_cols=102 Identities=20% Similarity=0.235 Sum_probs=84.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCC-CCCCceeEEEEcCCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP-FPGIVFDAVHCARCR 463 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LP-fpd~SFDlVvss~~~ 463 (796)
.+.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++ .+.+...+...++ +++++||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~- 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQA-AEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV- 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC-
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch-
Confidence 3679999999999999999876 899999999999888744 333454 3567788888887 78899999999874
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++..++..+|.++.|+|||||+|++...
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 66667899999999999999999998743
No 44
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.37 E-value=1.3e-12 Score=129.52 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=81.7
Q ss_pred CCCEEEEECCCCchh-HHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASF-GGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~-a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||+|||+|.+ ...++.. .|+++|+++.++..++.. +...+..+.+...+...+|+++++||+|++..+ ++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 100 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENF-SRENNFKLNISKGDIRKLPFKDESMSFVYSYGT-IF 100 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHH-HHHHTCCCCEEECCTTSCCSCTTCEEEEEECSC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEECchhhCCCCCCceeEEEEcCh-HH
Confidence 468999999999987 4444443 799999999999888744 334455667788888889999999999999864 44
Q ss_pred cc--cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 466 WH--IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 466 w~--~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+. .++..+|.++.|+|||||+|++...
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 33 3678999999999999999998743
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.37 E-value=2.2e-12 Score=129.46 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=85.8
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC------CeEEEEc
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI------PAISAVM 442 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl------~~~~~v~ 442 (796)
..+.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...++ .+.+...
T Consensus 17 ~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 17 RMNGVVAALKQ----SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL-DRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH-TTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHh----cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH-HHhcCCcccCcceEEEeC
Confidence 34455555543 34679999999999999999874 7999999999988887443 22333 4677778
Q ss_pred CCCCCCCCCCceeEEEEcCCCcccccch--HHHHHHHHhhcCCCcEEEEE
Q 003776 443 GTERLPFPGIVFDAVHCARCRVPWHIEG--GKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 443 d~e~LPfpd~SFDlVvss~~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s 490 (796)
+...++++.++||+|+|+.. +++..++ ..+|.++.|+|||||+|++.
T Consensus 92 d~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEV-IEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred CcccccccCCCcCEEeeHHH-HHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 87777877789999999874 5544444 79999999999999987765
No 46
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=2.2e-12 Score=129.46 Aligned_cols=112 Identities=12% Similarity=0.085 Sum_probs=85.5
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC------CeEEEEc
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI------PAISAVM 442 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl------~~~~~v~ 442 (796)
..+.+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..++ .+.+...
T Consensus 17 ~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 17 RLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK-IDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT-GGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH-hhccccccCcceEEEeC
Confidence 34445555443 34679999999999999999864 79999999999988874433 2222 4677788
Q ss_pred CCCCCCCCCCceeEEEEcCCCcccccch--HHHHHHHHhhcCCCcEEEEE
Q 003776 443 GTERLPFPGIVFDAVHCARCRVPWHIEG--GKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 443 d~e~LPfpd~SFDlVvss~~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s 490 (796)
+...+++++++||+|+|..+ +++..++ ..+|.++.|+|||||+|++.
T Consensus 92 d~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 92 SLVYRDKRFSGYDAATVIEV-IEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp CSSSCCGGGTTCSEEEEESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccccccccCCCCEEEEHHH-HHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 88888888899999999874 5544433 68999999999999977765
No 47
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.36 E-value=1.9e-12 Score=130.94 Aligned_cols=115 Identities=21% Similarity=0.338 Sum_probs=89.8
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
.+.+.+.+.+... ..++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...+..+.+...+...+|+
T Consensus 22 ~~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 22 KWSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCCGGGCCC
T ss_pred HHHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEecccccCCc
Confidence 3444455544331 125789999999999999999875 7999999999998887443 4455566778888888888
Q ss_pred CCCceeEEEEcC-CCcccc---cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 450 PGIVFDAVHCAR-CRVPWH---IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 450 pd~SFDlVvss~-~~l~w~---~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+ ++||+|++.. + +++. .++..+|.++.|+|||||+|++..
T Consensus 99 ~-~~fD~v~~~~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 99 N-RKFDLITCCLDS-TNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp S-CCEEEEEECTTG-GGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred c-CCceEEEEcCcc-ccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7 8999999986 4 6555 467899999999999999999874
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.36 E-value=5.6e-13 Score=140.77 Aligned_cols=103 Identities=11% Similarity=0.038 Sum_probs=75.8
Q ss_pred CCCCEEEEECCCCchhHHHH----hh--CCe----EEEeCChhhHHHHHHHHHHHcCCCe-EE--EEcCCCCCC------
Q 003776 388 KRTRVVLDVGCGVASFGGFL----FD--RGV----LTMSFAPKDEHEAQVQFALERGIPA-IS--AVMGTERLP------ 448 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~L----a~--~~V----~gvDiSp~dl~~A~~q~A~ergl~~-~~--~v~d~e~LP------ 448 (796)
.++.+|||||||+|.++..+ +. ..+ +++|+|+.|+..++.+.+...++.. .+ ...+.+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 34679999999999765433 22 123 9999999999988755443234432 22 233333433
Q ss_pred CCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 449 FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 449 fpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
|++++||+|+|..+ ++|..|+..+|++++|+|||||+|++..
T Consensus 131 ~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 67899999999875 7777799999999999999999999874
No 49
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.36 E-value=2.1e-12 Score=128.94 Aligned_cols=98 Identities=24% Similarity=0.301 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++... + +.+...+...++ ++++||+|+|+.+ +++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~--~~~~~~d~~~~~-~~~~fD~v~~~~~-l~~ 114 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----G--RPVRTMLFHQLD-AIDAYDAVWAHAC-LLH 114 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----T--SCCEECCGGGCC-CCSCEEEEEECSC-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----C--CceEEeeeccCC-CCCcEEEEEecCc-hhh
Confidence 4679999999999999999876 7999999998887776433 2 345667777888 7789999999874 554
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
.. ++..+|.++.|+|||||+|+++....
T Consensus 115 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 115 VPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 44 67899999999999999999985433
No 50
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.36 E-value=3.8e-12 Score=133.22 Aligned_cols=119 Identities=13% Similarity=0.178 Sum_probs=89.3
Q ss_pred cccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEE
Q 003776 365 QFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAIS 439 (796)
Q Consensus 365 ~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~ 439 (796)
.+.......++.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...++ .+.+
T Consensus 44 ~l~~a~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~ 118 (287)
T 1kpg_A 44 TLQEAQIAKIDLALGKLGL----QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRV 118 (287)
T ss_dssp CHHHHHHHHHHHHHTTTTC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEE
T ss_pred CHHHHHHHHHHHHHHHcCC----CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEE
Confidence 3444444455666666543 45789999999999999998843 8999999999988887433 33443 4566
Q ss_pred EEcCCCCCCCCCCceeEEEEcCCCcccc--cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 440 AVMGTERLPFPGIVFDAVHCARCRVPWH--IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 440 ~v~d~e~LPfpd~SFDlVvss~~~l~w~--~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
...+...+| ++||+|++..+ +++. .++..+|.++.|+|||||+|++...
T Consensus 119 ~~~d~~~~~---~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 119 LLAGWEQFD---EPVDRIVSIGA-FEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EESCGGGCC---CCCSEEEEESC-GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EECChhhCC---CCeeEEEEeCc-hhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 777777666 78999999874 4444 3678999999999999999998754
No 51
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.36 E-value=7.5e-13 Score=138.76 Aligned_cols=117 Identities=21% Similarity=0.216 Sum_probs=89.7
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcC----CCeEEEEcCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG----IPAISAVMGT 444 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~erg----l~~~~~v~d~ 444 (796)
..+.+.+.+.++. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++........ ..+.+...+.
T Consensus 43 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 3455556665543 34679999999999999999886 799999999999888744322111 1245667777
Q ss_pred CCCC---CCCCceeEEEEc-CCCcccccc-------hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 445 ERLP---FPGIVFDAVHCA-RCRVPWHIE-------GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 445 e~LP---fpd~SFDlVvss-~~~l~w~~d-------~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..+| +++++||+|+|. .+ +++..+ ...+|.+++|+|||||+|++..+
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~-l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNS-FAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTC-GGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChH-HhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7777 888999999997 43 665557 88999999999999999998843
No 52
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=1.1e-12 Score=136.06 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=87.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
.+.+.+.+.++. .++.+|||||||+|.++..|++. .|+|+|+++.++..++ .+. .+.+.+.+...+|+
T Consensus 21 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~-~~~~~~~d~~~~~~ 90 (261)
T 3ege_A 21 RIVNAIINLLNL----PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-----VHP-QVEWFTGYAENLAL 90 (261)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-----CCT-TEEEECCCTTSCCS
T ss_pred HHHHHHHHHhCC----CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-----hcc-CCEEEECchhhCCC
Confidence 455666666653 35789999999999999999875 8999999997765443 222 66778888899999
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++||+|++..+ +++..++..+|++++|+|| ||++++...
T Consensus 91 ~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 91 PDKSVDGVISILA-IHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CTTCBSEEEEESC-GGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCCCEeEEEEcch-HhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 9999999999875 6656799999999999999 997776643
No 53
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.35 E-value=1.2e-12 Score=140.33 Aligned_cols=102 Identities=10% Similarity=0.030 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC-------eEEEEcCC------CCC--CCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP-------AISAVMGT------ERL--PFP 450 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~-------~~~~v~d~------e~L--Pfp 450 (796)
.+.+|||||||+|..+..++.. .|+|+|+|+.|+..|+.+. ...+.. +.+.+.+. ..| +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~-~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY-NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH-Hhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4689999999999766555443 6999999999999998544 333432 33555554 223 467
Q ss_pred CCceeEEEEcCCCcccc---cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 451 GIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~---~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++||+|+|.++ +|+. .+...+|+++.|+|||||+|+++.+
T Consensus 127 ~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 789999999875 6653 2558999999999999999998743
No 54
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.35 E-value=2.5e-12 Score=132.87 Aligned_cols=96 Identities=21% Similarity=0.240 Sum_probs=79.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++. +...+.+...+...+|+ +++||+|+|....+++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARR-----RNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHH-----HCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHh-----hCCCCEEEECChHHCCc-cCCcCEEEEcCchhhh
Confidence 3689999999999999999876 79999999988766653 22356788888888888 6899999998633665
Q ss_pred cc---chHHHHHHHHhhcCCCcEEEEE
Q 003776 467 HI---EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 467 ~~---d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.. +...+|.++.++|||||+|++.
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 53 5678899999999999999986
No 55
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.35 E-value=5.5e-12 Score=129.14 Aligned_cols=101 Identities=26% Similarity=0.278 Sum_probs=82.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++. .+...+..+.+...+...++++ ++||+|+|..+.+++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARR-KAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 4679999999999999999876 79999999999988874 4445566778888888888876 689999986543333
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEe
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.. +...+|.++.++|||||+|++..
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 32 56789999999999999999864
No 56
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.34 E-value=2.8e-12 Score=129.91 Aligned_cols=108 Identities=19% Similarity=0.355 Sum_probs=86.0
Q ss_pred HHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCC
Q 003776 376 FIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGI 452 (796)
Q Consensus 376 ~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~ 452 (796)
.+.+.++. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ...+.+...+...+|++++
T Consensus 34 ~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~ 106 (243)
T 3bkw_A 34 ALRAMLPE----VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP---DTGITYERADLDKLHLPQD 106 (243)
T ss_dssp HHHHHSCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC---SSSEEEEECCGGGCCCCTT
T ss_pred HHHHhccc----cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc---cCCceEEEcChhhccCCCC
Confidence 45555553 34789999999999999999875 79999999988766652221 1235677788888898889
Q ss_pred ceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 453 VFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 453 SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+||+|++..+ +++..++..+|.++.++|||||+|+++.
T Consensus 107 ~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 107 SFDLAYSSLA-LHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEecc-ccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 9999999874 6666688999999999999999999874
No 57
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.34 E-value=5.6e-12 Score=127.73 Aligned_cols=112 Identities=20% Similarity=0.279 Sum_probs=88.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP 450 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfp 450 (796)
.+.+.+.+.++. +.+|||||||+|.++..|+++ .|+++|+++.++..++.. +...+..+.+...+...++++
T Consensus 22 ~~~~~~~~~~~~------~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~ 94 (243)
T 3d2l_A 22 EWVAWVLEQVEP------GKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEK-AMETNRHVDFWVQDMRELELP 94 (243)
T ss_dssp HHHHHHHHHSCT------TCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCGGGCCCS
T ss_pred HHHHHHHHHcCC------CCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHh-hhhcCCceEEEEcChhhcCCC
Confidence 455666666542 579999999999999999875 899999999999888744 344455677888888888876
Q ss_pred CCceeEEEEcCCCcccc---cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 451 GIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~---~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
++||+|++....+++. .++..+|.++.++|||||+|++..
T Consensus 95 -~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 95 -EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp -SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 8899999975225544 356789999999999999999874
No 58
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.34 E-value=2.8e-12 Score=132.87 Aligned_cols=98 Identities=27% Similarity=0.341 Sum_probs=81.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++... .. .+...+...+|+++++||+|++...+.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~-----~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKG-----VK-NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHT-----CS-CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhc-----CC-CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 4679999999999999999876 7999999998887765332 12 26778888899999999999997654555
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 467 HIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 467 ~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..++..+|.++.|+|||||+|++..+
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 56789999999999999999998754
No 59
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.33 E-value=3.5e-12 Score=134.76 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=81.9
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcC----CCeEEEEcCCCCCCCCCCceeEEEEcCCC
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG----IPAISAVMGTERLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~erg----l~~~~~v~d~e~LPfpd~SFDlVvss~~~ 463 (796)
..+|||||||+|.++..|+++ .|+++|+++.++..++.+. ...+ ..+.+.+.+...+|+ +++||+|+++...
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRL-AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHH-HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-hhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 459999999999999999886 8999999999998887443 3333 457788899888988 6899999986543
Q ss_pred ccccc--chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHI--EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++.. +...+|.++.|+|||||+|++...
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 44433 358999999999999999999843
No 60
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.33 E-value=2.3e-12 Score=128.21 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=79.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcC-CCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~erg-l~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++. .+ ..+.+...+...+ +++++||+|+++.. ++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-----~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~-l~ 118 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR-----HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW-LA 118 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG-----GCCTTEEEEECCTTSC-CCSSCEEEEEEESC-GG
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh-----cCCCCeEEEecccccC-CCCCceeEEEEech-hh
Confidence 4679999999999999999875 89999999988766653 45 4467777888777 78899999999874 55
Q ss_pred cccch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 466 WHIEG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 466 w~~d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+..++ ..+|.++.|+|||||+|++...
T Consensus 119 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 119 HVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 55554 8999999999999999998854
No 61
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.32 E-value=4.7e-12 Score=125.44 Aligned_cols=113 Identities=24% Similarity=0.373 Sum_probs=85.7
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL 447 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L 447 (796)
..+.+.+.+.+ .++.+|||||||+|.++..|+.+ .|+++|+++.++..++...+. ...+.+...+...+
T Consensus 30 ~~~~~~l~~~~------~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 30 SSFRALLEPEL------RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHHHHGGGC------CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC
T ss_pred HHHHHHHHHhc------CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC
Confidence 34445554443 24679999999999999999875 799999999988777644321 23457778888888
Q ss_pred CCCCCceeEEEEcCCCcc---------cc------cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 448 PFPGIVFDAVHCARCRVP---------WH------IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~---------w~------~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++++||+|+++.+ ++ |. .+...+|.++.|+|||||+|++..+
T Consensus 102 ~~~~~~fD~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 102 DFPSASFDVVLEKGT-LDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp CSCSSCEEEEEEESH-HHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCcccEEEECcc-hhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 999899999998653 21 11 1457899999999999999998743
No 62
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=2e-12 Score=130.38 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=79.4
Q ss_pred CCEEEEECCCCchhHHHHhhCCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccccc
Q 003776 390 TRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHIE 469 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~~d 469 (796)
+.+|||||||+|.++..|+.+ +++|+++.++..++ ++ .+.+...+...+|+++++||+|++..+ +++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a~-----~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIAR-----KR--GVFVLKGTAENLPLKDESFDFALMVTT-ICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHHH-----HT--TCEEEECBTTBCCSCTTCEEEEEEESC-GGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHHH-----hc--CCEEEEcccccCCCCCCCeeEEEEcch-HhhccC
Confidence 679999999999999999877 99999998876655 23 346677888889998899999999874 666668
Q ss_pred hHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 470 GGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 470 ~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
+..+|.++.++|||||+|++..+.
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 899999999999999999998543
No 63
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=5.2e-12 Score=134.14 Aligned_cols=100 Identities=18% Similarity=0.168 Sum_probs=81.1
Q ss_pred CCCEEEEECCCCchhHHHHh--h---CCeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLF--D---RGVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La--~---~~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
++.+|||||||+|.++..|+ . ..|+++|+++.++..++. .+...++. +.+...+...+|++ ++||+|+++.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATR-LAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHH-HHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 57899999999999999985 2 279999999999888873 33444544 67888888889988 9999999987
Q ss_pred CCcccccchHH---HHHHHHhhcCCCcEEEEEe
Q 003776 462 CRVPWHIEGGK---LLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 462 ~~l~w~~d~~~---~L~Ei~RVLKPGG~fv~s~ 491 (796)
+ +++..++.. +|.++.|+|||||+|+++.
T Consensus 196 ~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 196 L-NIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp S-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred h-hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 544445554 7999999999999999985
No 64
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.31 E-value=1e-11 Score=120.56 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=86.9
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC---eEEEEcCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTER 446 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~v~d~e~ 446 (796)
.....+.+.+.. .++.+|||+|||+|.++..++.+ .|+++|+++.++..++... ...++. +.+...+...
T Consensus 39 ~~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVV----DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENI-KLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHccc----CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-HHcCCCccceEEEECchhc
Confidence 344566666653 35789999999999999999875 8999999999998887443 444554 6667777654
Q ss_pred CCCCCCceeEEEEcCCCccc-ccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 447 LPFPGIVFDAVHCARCRVPW-HIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w-~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++++||+|+++.. +++ ..+...+|.++.++|||||++++...
T Consensus 114 -~~~~~~~D~v~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 114 -NVKDRKYNKIITNPP-IRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp -TCTTSCEEEEEECCC-STTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -ccccCCceEEEECCC-cccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 445678999999864 444 23567999999999999999998743
No 65
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.31 E-value=4.5e-12 Score=122.06 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++.. ...+.+...+ +|+++++||+|+++.. +++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~~~~~-l~~ 87 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFILFANS-FHD 87 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEEEESC-STT
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEEEccc-hhc
Confidence 4679999999999999999886 799999999887666533 3345556555 8888999999999874 555
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 467 HIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 467 ~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..++..+|.++.|+|||||+|++...
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 56889999999999999999998743
No 66
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.31 E-value=1.5e-12 Score=135.66 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=74.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHc-CC----------------------------C
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALER-GI----------------------------P 436 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~er-gl----------------------------~ 436 (796)
++.+|||||||+|.++..++.. .|+|+|+|+.|+..++....... .+ .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4679999999999887766553 69999999999998864321110 00 1
Q ss_pred eE-EEEcCCCC-CCCC---CCceeEEEEcCCCcccc----cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 437 AI-SAVMGTER-LPFP---GIVFDAVHCARCRVPWH----IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 437 ~~-~~v~d~e~-LPfp---d~SFDlVvss~~~l~w~----~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+. +..+|... .|++ .++||+|+|+++ +++. .+...+|.+++|+|||||+|+++.
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12 56677654 4543 579999999985 5543 255789999999999999999985
No 67
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=8.4e-12 Score=122.98 Aligned_cols=124 Identities=14% Similarity=0.024 Sum_probs=87.6
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI-PAISAV 441 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v 441 (796)
++.......+.+.+.+.... ..++.+|||+|||+|.++..++.+ .|+++|+++.++..++.. +...++ .+.+..
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~v~~~~ 99 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARN-IEALGLSGATLRR 99 (189)
T ss_dssp C---CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHH-HHHHTCSCEEEEE
T ss_pred CccCcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHH-HHHcCCCceEEEE
Confidence 33444455555555443211 124789999999999999977764 699999999999888744 444454 466777
Q ss_pred cCCCCCC--CCCCceeEEEEcCCCcccc-cchHHHHHHHHh--hcCCCcEEEEEeC
Q 003776 442 MGTERLP--FPGIVFDAVHCARCRVPWH-IEGGKLLLELNR--VLRPGGFFIWSAT 492 (796)
Q Consensus 442 ~d~e~LP--fpd~SFDlVvss~~~l~w~-~d~~~~L~Ei~R--VLKPGG~fv~s~~ 492 (796)
.|...++ +++++||+|+++.. +++. .+...+|.++.+ +|||||+|++...
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred ccHHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 7765543 45689999999864 3332 467899999999 9999999998743
No 68
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.30 E-value=1.1e-11 Score=131.84 Aligned_cols=119 Identities=11% Similarity=0.151 Sum_probs=89.5
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISA 440 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~ 440 (796)
+.......++.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.. +...++. +.+.
T Consensus 71 l~~~~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~ 145 (318)
T 2fk8_A 71 LEEAQYAKVDLNLDKLDL----KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQV-LASIDTNRSRQVL 145 (318)
T ss_dssp HHHHHHHHHHHHHTTSCC----CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTSCCSSCEEEE
T ss_pred HHHHHHHHHHHHHHhcCC----CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEE
Confidence 333334455566665543 45789999999999999988864 799999999998888743 3344543 5677
Q ss_pred EcCCCCCCCCCCceeEEEEcCCCcccc--cchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 441 VMGTERLPFPGIVFDAVHCARCRVPWH--IEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 441 v~d~e~LPfpd~SFDlVvss~~~l~w~--~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
..+...+| ++||+|++..+ +++. .++..+|.++.|+|||||+|++..+.
T Consensus 146 ~~d~~~~~---~~fD~v~~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 146 LQGWEDFA---EPVDRIVSIEA-FEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp ESCGGGCC---CCCSEEEEESC-GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred ECChHHCC---CCcCEEEEeCh-HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 77777765 78999999874 5444 37789999999999999999987543
No 69
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.30 E-value=8.7e-12 Score=126.00 Aligned_cols=97 Identities=20% Similarity=0.232 Sum_probs=78.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++. +...+.+...+...+++ +++||+|+|....+++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-----~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARK-----RLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHH-----HCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHH-----hCCCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 4689999999999999999875 79999999988876653 22345777888888887 6899999976544555
Q ss_pred cc---chHHHHHHHHhhcCCCcEEEEEe
Q 003776 467 HI---EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 467 ~~---d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.. +...+|.++.++|||||+|++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 52 45789999999999999999874
No 70
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.30 E-value=1e-11 Score=130.09 Aligned_cols=100 Identities=13% Similarity=0.131 Sum_probs=83.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++ +.+...++.+.+...+...+++ +++||+|+++.. +++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~-~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLN-ETKEKENLNISTALYDINAANI-QENYDFIVSTVV-FMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSS-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHH-HHHHHcCCceEEEEeccccccc-cCCccEEEEccc-hhh
Confidence 4779999999999999999876 8999999999998887 4455566677888888888877 789999999874 554
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEe
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.. +...+|.++.++|||||+|++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 43 34699999999999999988753
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.29 E-value=2.1e-12 Score=136.87 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=76.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcC------------------------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERG------------------------------ 434 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~erg------------------------------ 434 (796)
.+.+|||||||+|.++..|+.+ .|+|+|+++.++..|+........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4789999999999999998864 899999999999888744221100
Q ss_pred ----------------------------CCeEEEEcCCCCC-----CCCCCceeEEEEcCCCccccc------chHHHHH
Q 003776 435 ----------------------------IPAISAVMGTERL-----PFPGIVFDAVHCARCRVPWHI------EGGKLLL 475 (796)
Q Consensus 435 ----------------------------l~~~~~v~d~e~L-----Pfpd~SFDlVvss~~~l~w~~------d~~~~L~ 475 (796)
..+.+...+.... ++..++||+|+|... ++|.. ++..+|+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHHH
Confidence 1355666665433 367789999999864 54431 5678999
Q ss_pred HHHhhcCCCcEEEEE
Q 003776 476 ELNRVLRPGGFFIWS 490 (796)
Q Consensus 476 Ei~RVLKPGG~fv~s 490 (796)
+++++|||||+|++.
T Consensus 205 ~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 205 RIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCcEEEEe
Confidence 999999999999987
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.29 E-value=5.1e-12 Score=126.03 Aligned_cols=96 Identities=21% Similarity=0.233 Sum_probs=75.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC---CCCCC-ceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL---PFPGI-VFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L---Pfpd~-SFDlVvss~~ 462 (796)
.+.+|||||||+|.++..|+.+ .|+++|+++.++..++ ++ ....+...+...+ ++..+ +||+|+++.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-----~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAAR-----AA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHH-----HT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHH-----Hh-cccccchhhHHhhcccccccCCCccEEEECch
Confidence 4689999999999999999876 7999999998876665 22 2334555554444 55444 5999999875
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++ +.++..+|.++.|+|||||+|++..+
T Consensus 126 -l~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 126 -LL-HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp -CC-SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hh-hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 55 77899999999999999999999854
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=7.4e-11 Score=114.59 Aligned_cols=100 Identities=22% Similarity=0.220 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++. +...+.+...+...+++++++||+|+++...+++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~-----~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQ-----DFPEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHH-----hCCCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 4779999999999999999875 79999999988766653 2234567788888888888999999997433444
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
.. +...+|.++.++|+|||++++..+.
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 32 4578999999999999999987543
No 74
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=7e-12 Score=130.87 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCC-CCCceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPF-PGIVFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPf-pd~SFDlVvss~~ 462 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++... ...++ .+.+...+...+|+ ++++||+|++..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 5789999999999998888763 7999999999998887443 33443 35677788888888 6889999999874
Q ss_pred Cccc----ccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 463 RVPW----HIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 463 ~l~w----~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++ ..++..+|.++.|+|||||+|++..+
T Consensus 143 -l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 -FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp -GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 554 13668999999999999999998853
No 75
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=1.9e-11 Score=120.71 Aligned_cols=105 Identities=15% Similarity=0.102 Sum_probs=81.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCC-CCCCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP-FPGIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LP-fpd~SFDlVvss 460 (796)
++.+|||+|||+|.++..|+++ .|+++|+++.++..++. .+...++ .+.+...+...++ +.+++||+|+++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTK-KLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 4789999999999999988764 79999999999988874 4445555 4567777776665 666899999998
Q ss_pred CCCcccc--------cchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 461 RCRVPWH--------IEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 461 ~~~l~w~--------~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
..+++.. .+...+|.++.++|||||+|++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 6432211 134579999999999999999886443
No 76
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.27 E-value=1.4e-11 Score=127.57 Aligned_cols=98 Identities=28% Similarity=0.406 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++ +++..+.+...+...+|+++++||+|+++..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA-----KRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH-----HHCTTSEEEECCTTSCSBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-----HhCCCcEEEEcchhhCCCCCCceeEEEEeCC--
Confidence 4779999999999999998874 7999999998776554 3444567788888889999999999999752
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchH
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPE 500 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~E 500 (796)
..+|.++.|+|||||+|++.. +....+.+
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~ 186 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITAT-PGPRHLME 186 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEE-ECTTTTHH
T ss_pred ------hhhHHHHHHhcCCCcEEEEEE-cCHHHHHH
Confidence 235899999999999999874 34444433
No 77
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.27 E-value=1.7e-11 Score=124.60 Aligned_cols=102 Identities=14% Similarity=0.027 Sum_probs=79.9
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHH-cCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALE-RGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~e-rgl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
..+|||||||+|.++..|+.. .|+++|+++.++..++...... ....+.+...+...++ ++++||+|+++.+ +++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~-l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVF-FCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESS-TTT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChh-hhc
Confidence 459999999999999999875 7999999999988877443321 1123577778887777 4569999999874 554
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
.. +...+|.++.|+|||||+|++....
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 44 6789999999999999999987543
No 78
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.26 E-value=3.3e-11 Score=122.24 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=73.3
Q ss_pred CCCCEEEEECCCCchhHHHHhh----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC----CCCCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER----LPFPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~----LPfpd~SFDlVvs 459 (796)
.++.+|||||||+|.++..|++ ..|+|+|+++.++.... +.|+.+ ..+.+.+.|... ++++ ++||+|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL-ELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH-HHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 4578999999999999988876 36999999998875544 445444 245556666654 3555 78999999
Q ss_pred cCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+. ..+.+...+|.+++|+|||||+|+++.
T Consensus 133 ~~---~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI---AQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC---CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec---cChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 74 223334556999999999999999884
No 79
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.25 E-value=2.4e-11 Score=134.45 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=86.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||+|||+|.++..|+.+ .|+++|+++.++..++ +.+...++.+.+...|...+++++++||+|+++.. +++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~-~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQ-KGLEANALKAQALHSDVDEALTEEARFDIIVTNPP-FHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHH-HHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-CCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc-hhh
Confidence 4679999999999999999876 8999999999998887 44555677778888888888777789999999864 444
Q ss_pred -----ccchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 467 -----HIEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 467 -----~~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
..+...+|.++.++|||||+|+++....
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2255789999999999999999985543
No 80
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.25 E-value=2.2e-11 Score=117.42 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=75.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCC-CCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGT-ERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~-e~LPfpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|.++..|+.+ .|+++|+++.++..++ +.+...++. ..+...+. ..++...++||+|++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL-SNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH-HHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH-HHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 35779999999999999998875 6999999999988887 344445554 23555554 44444448899999987
Q ss_pred CCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. +++ ..+|.++.++|||||+|++...
T Consensus 103 ~-~~~----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 103 G-LTA----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp --TTC----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred c-ccH----HHHHHHHHHhcCCCCEEEEEee
Confidence 4 433 6899999999999999998743
No 81
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.25 E-value=3.4e-11 Score=121.09 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=81.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCC--CCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP--FPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LP--fpd~SFDlVvss~ 461 (796)
.+.+|||||||+|.++..|+.. .|+|+|+++.++..++.. +...++ .+.+...+...++ +++++||+|++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDK-VLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHH-HHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4679999999999999988764 799999999999888744 444554 4667778877777 7788999999986
Q ss_pred CCccccc--------chHHHHHHHHhhcCCCcEEEEEe
Q 003776 462 CRVPWHI--------EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 462 ~~l~w~~--------d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
. .+|.. ....+|.++.++|||||.|++..
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 4 45532 12589999999999999999874
No 82
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.25 E-value=4.9e-11 Score=123.61 Aligned_cols=117 Identities=17% Similarity=0.143 Sum_probs=84.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChh------hHHHHHHHHHHHcCC--CeE
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPK------DEHEAQVQFALERGI--PAI 438 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~------dl~~A~~q~A~ergl--~~~ 438 (796)
.....+.+.+.. .++.+|||||||+|.++..|+. ..|+++|+++. ++..++... ...++ .+.
T Consensus 30 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~v~ 104 (275)
T 3bkx_A 30 AHRLAIAEAWQV----KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDRLT 104 (275)
T ss_dssp HHHHHHHHHHTC----CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGGEE
T ss_pred HHHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCceE
Confidence 334444454432 3578999999999999998875 37999999987 787776443 33443 356
Q ss_pred EEEcC---CCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 439 SAVMG---TERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 439 ~~v~d---~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+...+ ...+|+++++||+|++..+ +++..++..++..+.++++|||+|++.....
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHS-LWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESC-GGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred EEECChhhhccCCCCCCCEEEEEEccc-hhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 66676 4667888899999999874 5555577776666777777799999875433
No 83
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.24 E-value=9.5e-12 Score=127.02 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=80.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCC-CC--CCCCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTER-LP--FPGIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~-LP--fpd~SFDlVvss 460 (796)
...+|||||||+|.++..|+.. .|+|+|+++.++..++ +.+...++. +.+...|+.. ++ +++++||+|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~-~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACL-ASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHH-HHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHH-HHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4679999999999999999864 5999999999998887 445556654 5666677655 34 788999999998
Q ss_pred CCCcccccch--------HHHHHHHHhhcCCCcEEEEEe
Q 003776 461 RCRVPWHIEG--------GKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 461 ~~~l~w~~d~--------~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+. .+|+... ..+|.++.|+|||||+|++++
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 64 5665422 259999999999999999884
No 84
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.24 E-value=5.4e-11 Score=119.78 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=77.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~~ 463 (796)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++ +.+...+++ +.+...+..........||+|++...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQ-KNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 35789999999999999999875 8999999999998887 445556665 66777777653222357999998753
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+ +.. +|.++.++|||||+|++...
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 2 456 99999999999999998743
No 85
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.24 E-value=1.7e-11 Score=124.12 Aligned_cols=101 Identities=15% Similarity=0.170 Sum_probs=80.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCC--CCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP--FPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LP--fpd~SFDlVvss~ 461 (796)
.+.+|||||||+|.++..|+.+ .|+|+|+++.++..|+ +.+...++. +.+...|+..++ +++++||.|++++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~-~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAV-QKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHH-HHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHH-HHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4679999999999999998764 7999999999998887 445555654 566777777776 7788999999876
Q ss_pred CCcccccc--------hHHHHHHHHhhcCCCcEEEEEe
Q 003776 462 CRVPWHIE--------GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 462 ~~l~w~~d--------~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+ .+|... ...+|.++.|+|||||.|++.+
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 4 455432 3688999999999999999874
No 86
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.24 E-value=9.2e-12 Score=130.93 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=74.4
Q ss_pred CCCEEEEECCCCchhHHHHhh---CCeEEEeCChhhHHHHHHHHHH----------------HcCC--------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFAL----------------ERGI-------------- 435 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~---~~V~gvDiSp~dl~~A~~q~A~----------------ergl-------------- 435 (796)
++.+|||||||+|.++..++. ..|+|+|+++.|+..++..... ..+.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 468999999999996554443 3799999999999877642210 1110
Q ss_pred CeEEEEcCCCC-CCC-----CCCceeEEEEcCCCccc----ccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 436 PAISAVMGTER-LPF-----PGIVFDAVHCARCRVPW----HIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 436 ~~~~~v~d~e~-LPf-----pd~SFDlVvss~~~l~w----~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
...+..+|+.. +|+ ++++||+|+|+.+ ++| ..++..+|.+++|+|||||+|++..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhh-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 02345557655 664 4567999999975 666 3468899999999999999999873
No 87
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1e-11 Score=126.83 Aligned_cols=100 Identities=12% Similarity=0.008 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCC-----CceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG-----IVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd-----~SFDlVvss~ 461 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ....+.+.+.+...+++.. ..||+|++..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEcc
Confidence 5679999999999999999875 8999999999887776332 2235677788877765432 2499999986
Q ss_pred CCccccc--chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHI--EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+ +++.. +...+|.++.|+|||||+|++...
T Consensus 133 ~-~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 133 G-FHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp S-STTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred h-hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 55555 668999999999999999887643
No 88
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=121.15 Aligned_cols=86 Identities=23% Similarity=0.320 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchhHHHHhhCCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHI 468 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~~ 468 (796)
++.+|||||||+|.++..|. ..|+++|+++. .+.+...+...+|+++++||+|++..+ +| +.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~-~~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS-LM-GT 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC-CC-SS
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh-cc-cc
Confidence 46799999999999998885 68999999985 234677788889999999999999875 55 47
Q ss_pred chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 469 EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 469 d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++..+|.++.++|||||+|++...
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEc
Confidence 889999999999999999998754
No 89
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.23 E-value=1.1e-12 Score=145.25 Aligned_cols=115 Identities=11% Similarity=0.106 Sum_probs=86.8
Q ss_pred ccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEE--E-Ec
Q 003776 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAIS--A-VM 442 (796)
Q Consensus 368 ~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~--~-v~ 442 (796)
.....+.+.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++ +++++... + ..
T Consensus 90 ~~~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~~~~ 160 (416)
T 4e2x_A 90 EHFAMLARDFLATELT----GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAR-----EKGIRVRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHHHHHTTTC----SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHH-----TTTCCEECSCCSHH
T ss_pred HHHHHHHHHHHHHhCC----CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHH-----HcCCCcceeeechh
Confidence 3344555666665542 35789999999999999999886 8999999998775544 44554322 1 12
Q ss_pred CCCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 443 GTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 443 d~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+...+|+++++||+|++... +++..++..+|++++|+|||||+|++..+
T Consensus 161 ~~~~l~~~~~~fD~I~~~~v-l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 161 TADDVRRTEGPANVIYAANT-LCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHHHHHHHHCCEEEEEEESC-GGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhhcccCCCCEEEEEECCh-HHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 23566778899999999874 66566999999999999999999999743
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.22 E-value=1.1e-10 Score=116.18 Aligned_cols=109 Identities=12% Similarity=-0.020 Sum_probs=82.3
Q ss_pred HHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCC
Q 003776 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPF 449 (796)
Q Consensus 375 d~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPf 449 (796)
..+...+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++... ...++. +.+...+......
T Consensus 30 ~~~l~~l~~----~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 30 AVTLSKLRL----QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNL-KKFVARNVTLVEAFAPEGLD 104 (204)
T ss_dssp HHHHHHTTC----CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHH-HHHTCTTEEEEECCTTTTCT
T ss_pred HHHHHHcCC----CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeCChhhhhh
Confidence 445555542 45789999999999999998864 6999999999998887444 444543 5666677644433
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
...+||+|++... ++ +...+|.++.++|||||+|++...
T Consensus 105 ~~~~~D~i~~~~~-~~---~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 105 DLPDPDRVFIGGS-GG---MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TSCCCSEEEESCC-TT---CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCCCCCEEEECCC-Cc---CHHHHHHHHHHhcCCCeEEEEEec
Confidence 3367999999863 22 788999999999999999998743
No 91
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.22 E-value=8.6e-12 Score=124.63 Aligned_cols=96 Identities=18% Similarity=0.313 Sum_probs=78.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC--CCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER--LPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~--LPfpd~SFDlVvss~~~l 464 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++ ++. ..+...+... +|+++++||+|++..+ +
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~-----~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~-l 103 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAK-----EKL--DHVVLGDIETMDMPYEEEQFDCVIFGDV-L 103 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHH-----TTS--SEEEESCTTTCCCCSCTTCEEEEEEESC-G
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH-----HhC--CcEEEcchhhcCCCCCCCccCEEEECCh-h
Confidence 5789999999999999999875 7999999998765554 222 2456677654 7788899999999874 5
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++..++..+|.++.++|||||+++++.+
T Consensus 104 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 104 EHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp GGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5556889999999999999999999853
No 92
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=3.7e-11 Score=131.04 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=81.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCC-
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC- 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~- 462 (796)
++.+|||||||+|.++..|+++ .|+|+|+++ ++..|+ +.+...++. +.+...+...+++++++||+|++...
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4789999999999999999876 799999995 887776 555566665 67888899999999999999999641
Q ss_pred -CcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 463 -RVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 463 -~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.+++..++..+|.++.|+|||||+|++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1333347789999999999999999843
No 93
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.22 E-value=1.8e-11 Score=136.21 Aligned_cols=126 Identities=10% Similarity=-0.002 Sum_probs=93.4
Q ss_pred ccccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHH------HHHc
Q 003776 364 TQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQF------ALER 433 (796)
Q Consensus 364 t~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~------A~er 433 (796)
..|.......+..+.+.+.. .++.+|||||||+|.++..++.. .|+|+|+++.++..|+... +...
T Consensus 152 ~vYGEt~~~~i~~il~~l~l----~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~ 227 (438)
T 3uwp_A 152 EVYGETSFDLVAQMIDEIKM----TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY 227 (438)
T ss_dssp GGGGGTHHHHHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555556666665543 46789999999999999888752 4999999998888776432 2333
Q ss_pred CC---CeEEEEcCCCCCCCCC--CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 434 GI---PAISAVMGTERLPFPG--IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 434 gl---~~~~~v~d~e~LPfpd--~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
|+ .+.+..+|+..+||++ ..||+|+++. +.+..++...|.+++|+|||||+|++...+.+
T Consensus 228 Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn--~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 228 GKKHAEYTLERGDFLSEEWRERIANTSVIFVNN--FAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp TBCCCEEEEEECCTTSHHHHHHHHTCSEEEECC--TTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCCCCCeEEEECcccCCccccccCCccEEEEcc--cccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 53 4677888888888754 4799999975 33456888999999999999999997754443
No 94
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.22 E-value=3e-11 Score=120.17 Aligned_cols=95 Identities=20% Similarity=0.107 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
++.+|||+|||+|.++..|++. .|+++|+++.++..++. .+...++. +.+...+... +.+++||+|+++.. +
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~-~ 135 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE-NAALNGIYDIALQKTSLLA--DVDGKFDLIVANIL-A 135 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESC-H
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEeccccc--cCCCCceEEEECCc-H
Confidence 4789999999999999998875 79999999999988874 44445554 6677776644 34589999999863 3
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+ ....+|.++.++|||||+|+++
T Consensus 136 ~---~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 136 E---ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp H---HHHHHGGGSGGGEEEEEEEEEE
T ss_pred H---HHHHHHHHHHHhcCCCCEEEEE
Confidence 2 2578899999999999999986
No 95
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.21 E-value=1.1e-10 Score=117.83 Aligned_cols=103 Identities=17% Similarity=0.024 Sum_probs=79.2
Q ss_pred CCCEEEEECCC-CchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCC-CCCCCCCceeEEEEcCCC
Q 003776 389 RTRVVLDVGCG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE-RLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 389 ~~~~VLDIGCG-tG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e-~LPfpd~SFDlVvss~~~ 463 (796)
++.+|||+||| +|.++..|+.+ .|+++|+++.++..++ +.+...++.+.+...+.. ..++++++||+|+++..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYAR-RNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHH-HHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHH-HHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 57899999999 99999988764 7999999999998887 445556667777888753 335667899999998642
Q ss_pred ccccc------------------chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHI------------------EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~------------------d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++... ....+|.++.++|||||+|++..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 22110 136789999999999999998643
No 96
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.21 E-value=3.7e-11 Score=122.03 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCC-CCCCCC-CCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERLPFP-GIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~-e~LPfp-d~SFDlVvss~~~l 464 (796)
++.+|||||||+|.++..|+++ .|+++|+++.++..++.. ...+.+...+. ..+|++ +++||+|+++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~--- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSRR--- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEES---
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeCC---
Confidence 4789999999999999999875 799999999888766533 44567888887 788998 89999999973
Q ss_pred ccccchHHHHHHHHhhcCCCcEEE
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFI 488 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv 488 (796)
++..+|.++.|+|||||+|+
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEE
Confidence 56789999999999999999
No 97
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.20 E-value=3.7e-11 Score=116.79 Aligned_cols=122 Identities=11% Similarity=-0.012 Sum_probs=87.3
Q ss_pred cccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEE
Q 003776 365 QFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAIS 439 (796)
Q Consensus 365 ~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~ 439 (796)
.+......+.+.+.+.+..+ .++.+|||+|||+|.++..++.+ .|+++|+++.++..++... ...++ .+.+
T Consensus 23 ~~rp~~~~~~~~~~~~l~~~---~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~ 98 (187)
T 2fhp_A 23 NTRPTTDKVKESIFNMIGPY---FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENI-AITKEPEKFEV 98 (187)
T ss_dssp SSCCCCHHHHHHHHHHHCSC---CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHTCGGGEEE
T ss_pred CcCcCHHHHHHHHHHHHHhh---cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HHhCCCcceEE
Confidence 34455566666666666432 24679999999999999987764 6999999999998887444 44454 3566
Q ss_pred EEcCCCC----CCCCCCceeEEEEcCCCcccccchHHHHHHH--HhhcCCCcEEEEEeC
Q 003776 440 AVMGTER----LPFPGIVFDAVHCARCRVPWHIEGGKLLLEL--NRVLRPGGFFIWSAT 492 (796)
Q Consensus 440 ~v~d~e~----LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei--~RVLKPGG~fv~s~~ 492 (796)
...+... +++++++||+|+++.. ++ ......++..+ .|+|||||+|++...
T Consensus 99 ~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 99 RKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 7777533 2334678999999863 22 23567777777 999999999998743
No 98
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.20 E-value=2.9e-11 Score=127.51 Aligned_cols=109 Identities=14% Similarity=0.028 Sum_probs=77.8
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC-
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF- 449 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf- 449 (796)
++..+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.|+..++.+.. ... ...+...++.
T Consensus 33 ~~~~il~~l~l----~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~-~~~-----v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLENI----VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALA-DRC-----VTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTTC----CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTS-SSC-----CEEEECCTTSC
T ss_pred HHHHHHHhcCC----CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-hcc-----ceeeeeecccc
Confidence 34555555543 45789999999999999999876 89999999999987763322 111 1122222222
Q ss_pred ----CCCceeEEEEcCCCccccc--chHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 450 ----PGIVFDAVHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 450 ----pd~SFDlVvss~~~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
.+++||+|+++.. +++.. +...+|.++.++| |||.|+++...
T Consensus 103 ~~~~~~~~fD~Vv~~~~-l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRL-INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCGGGTTCCSEEEEESC-GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred cccccCCCccEEEEhhh-hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 2578999999874 44332 5578999999999 99999998543
No 99
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.20 E-value=9.1e-11 Score=127.56 Aligned_cols=111 Identities=22% Similarity=0.219 Sum_probs=85.1
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER 446 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~ 446 (796)
.|.+.|.+.+.. .++.+|||||||+|.++..++++ .|+++|+++ ++..++ +.+...++ .+.+...+...
T Consensus 51 ~~~~~i~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 51 SYRDFIYQNPHI----FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHCGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhhhh----cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHH
Confidence 444556555443 35789999999999999999875 699999997 887776 44445554 46777888888
Q ss_pred CCCCCCceeEEEEcCC--CcccccchHHHHHHHHhhcCCCcEEE
Q 003776 447 LPFPGIVFDAVHCARC--RVPWHIEGGKLLLELNRVLRPGGFFI 488 (796)
Q Consensus 447 LPfpd~SFDlVvss~~--~l~w~~d~~~~L~Ei~RVLKPGG~fv 488 (796)
+++++++||+|++... .+.+..++..+|.++.|+|||||+|+
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9998889999999651 12333356789999999999999998
No 100
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.19 E-value=8.5e-11 Score=125.97 Aligned_cols=97 Identities=14% Similarity=0.198 Sum_probs=77.4
Q ss_pred CCCCEEEEECCCCchhHHHH-hh---CCeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFL-FD---RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~L-a~---~~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||||||+|.++..+ ++ ..|+++|+++.++..|+... .+.|+ .+.+..+++..+| +++||+|++..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~-~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a- 196 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVI-EGLGVDGVNVITGDETVID--GLEFDVLMVAA- 196 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHH-HHHTCCSEEEEESCGGGGG--GCCCSEEEECT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHH-HhcCCCCeEEEECchhhCC--CCCcCEEEECC-
Confidence 56899999999999776544 33 38999999999999998544 44454 4567777777765 68999999864
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+ ..+...+|.++.|+|||||+|++..
T Consensus 197 -~--~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 197 -L--AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp -T--CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -C--ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 2 3578899999999999999999874
No 101
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.18 E-value=4.4e-11 Score=123.55 Aligned_cols=102 Identities=21% Similarity=0.161 Sum_probs=77.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-----cCC-CeEEEEcCCCC-CC--CCCCcee
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-----RGI-PAISAVMGTER-LP--FPGIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-----rgl-~~~~~v~d~e~-LP--fpd~SFD 455 (796)
...+|||||||+|.++..|+.+ .|+|+|+++.++..|+...... .+. .+.+...++.. +| |++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4678999999999999999864 6999999999998887443321 233 36677788765 77 8889999
Q ss_pred EEEEcCCCcccccc--------hHHHHHHHHhhcCCCcEEEEEe
Q 003776 456 AVHCARCRVPWHIE--------GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 456 lVvss~~~l~w~~d--------~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+|++.+. .+|... ...+|.++.|+|||||.|++.+
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9998764 455321 1479999999999999999874
No 102
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=1.1e-10 Score=116.47 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=82.8
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP 448 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LP 448 (796)
.....+.+.+.. .++.+|||||||+|.++..|++. .|+++|+++.++..++... ...++. +.+...+....+
T Consensus 64 ~~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLEL----TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRL-KNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCceEEEECCcccCC
Confidence 344555555543 45789999999999999999874 8999999999998887444 344544 567777776666
Q ss_pred CCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 449 FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 449 fpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
.+.++||+|++..+ +++..+ ++.++|||||+|++....
T Consensus 139 ~~~~~~D~i~~~~~-~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAA-PPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSB-CSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccc-hhhhhH------HHHHhcccCcEEEEEEcC
Confidence 66789999999864 444433 689999999999998553
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.17 E-value=3.9e-11 Score=120.29 Aligned_cols=118 Identities=13% Similarity=0.003 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC---CeEEEEcC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMG 443 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl---~~~~~v~d 443 (796)
...+...+.+.+... .++.+|||+|||+|.++..++.+ .|+++|+++.++..++. .+...++ .+.+...|
T Consensus 37 ~~~~~~~l~~~l~~~---~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~~v~~~~~d 112 (201)
T 2ift_A 37 GDRVKETLFNWLMPY---IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKK-NLQTLKCSSEQAEVINQS 112 (201)
T ss_dssp -CHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCTTTEEEECSC
T ss_pred HHHHHHHHHHHHHHh---cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHH-HHHHhCCCccceEEEECC
Confidence 334444454444321 13679999999999999986654 69999999999988874 4455565 46667777
Q ss_pred CCCC-C-CCCCc-eeEEEEcCCCcccccchHHHHHHH--HhhcCCCcEEEEEeCC
Q 003776 444 TERL-P-FPGIV-FDAVHCARCRVPWHIEGGKLLLEL--NRVLRPGGFFIWSATP 493 (796)
Q Consensus 444 ~e~L-P-fpd~S-FDlVvss~~~l~w~~d~~~~L~Ei--~RVLKPGG~fv~s~~~ 493 (796)
...+ + +++++ ||+|++... ++ ..+...+|..+ .|+|||||+|+++..+
T Consensus 113 ~~~~~~~~~~~~~fD~I~~~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 113 SLDFLKQPQNQPHFDVVFLDPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp HHHHTTSCCSSCCEEEEEECCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred HHHHHHhhccCCCCCEEEECCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 5443 3 24678 999999864 22 23567888888 7789999999987543
No 104
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.17 E-value=3.5e-11 Score=124.85 Aligned_cols=112 Identities=13% Similarity=0.163 Sum_probs=83.0
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCC---C
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---E 445 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~---e 445 (796)
...|..-+..+. .+++.+|||+|||+|.++..|++. .|+++|+++.|+..+. +.+.+++ .+..+..+. .
T Consensus 63 aa~i~~gl~~l~-ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~~-ni~~V~~d~~~p~ 139 (233)
T 4df3_A 63 AAALLKGLIELP-VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDRR-NIFPILGDARFPE 139 (233)
T ss_dssp HHHHHTTCSCCC-CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTCT-TEEEEESCTTCGG
T ss_pred HHHHHhchhhcC-CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhhc-CeeEEEEeccCcc
Confidence 344555554332 357899999999999999999874 6999999999987775 3333332 344455543 4
Q ss_pred CCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..++...+||+|++.. .++.+...+|.++.|+|||||+|+++.
T Consensus 140 ~~~~~~~~vDvVf~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 140 KYRHLVEGVDGLYADV---AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp GGTTTCCCEEEEEECC---CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccceEEEEEEec---cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 4567788999999854 445577899999999999999999873
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.16 E-value=6.7e-11 Score=121.34 Aligned_cols=96 Identities=14% Similarity=0.011 Sum_probs=78.0
Q ss_pred CCCEEEEECCCCchhHHHHhh----CCeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCC---CCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFP---GIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~----~~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfp---d~SFDlVvss 460 (796)
.+.+|||||||+|.++..|+. ..|+++|+++.++..++. .+...++ .+.+...+...++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEK-LSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467999999999999988873 279999999999988874 4444565 466777777777764 6799999996
Q ss_pred CCCcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 461 ~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
. + .+...++.++.++|||||+|++.
T Consensus 149 ~--~---~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 149 A--V---ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp C--C---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c--c---CCHHHHHHHHHHhcCCCCEEEEE
Confidence 5 2 46789999999999999999986
No 106
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.16 E-value=1.8e-10 Score=121.54 Aligned_cols=101 Identities=11% Similarity=0.107 Sum_probs=77.2
Q ss_pred CCCEEEEECCCC---chhHHHHhh----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC-----------CC
Q 003776 389 RTRVVLDVGCGV---ASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----------FP 450 (796)
Q Consensus 389 ~~~~VLDIGCGt---G~~a~~La~----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP-----------fp 450 (796)
...+|||||||+ |.++..+.. .+|+++|+++.|+..++.... ....+.+...|...++ ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 357999999999 988766653 379999999999988875442 1234667777764421 23
Q ss_pred CCceeEEEEcCCCcccccc--hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 451 GIVFDAVHCARCRVPWHIE--GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~~d--~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..+||+|+++.. +||..+ +..+|++++|+|||||+|+++..
T Consensus 155 ~~~~d~v~~~~v-lh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 155 FSRPAAIMLVGM-LHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TTSCCEEEETTT-GGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEEEech-hhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 348999999864 777665 78999999999999999999854
No 107
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.16 E-value=2.9e-11 Score=124.06 Aligned_cols=102 Identities=16% Similarity=0.247 Sum_probs=78.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC------------------------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI------------------------------ 435 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl------------------------------ 435 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.... ..+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLK-KEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHT-TCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHh-cCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4679999999999999888764 79999999999888764332 1110
Q ss_pred Ce-EEEEcCCCCC-CCCC---CceeEEEEcCCCcc----cccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 436 PA-ISAVMGTERL-PFPG---IVFDAVHCARCRVP----WHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 436 ~~-~~~v~d~e~L-Pfpd---~SFDlVvss~~~l~----w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.+ .+...+...+ ++++ ++||+|+++.+ ++ +..++..+|.++.|+|||||+|++...
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC-LDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhh-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 04 5677777554 3455 89999999874 54 333678999999999999999998853
No 108
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.15 E-value=1.5e-10 Score=127.45 Aligned_cols=111 Identities=16% Similarity=0.187 Sum_probs=86.0
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e 445 (796)
..|.+.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|++ .++..++ +.+...++. +.+...+..
T Consensus 49 ~~~~~~i~~~~~~----~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~ 122 (376)
T 3r0q_C 49 DAYFNAVFQNKHH----FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHTTTTT----TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGG
T ss_pred HHHHHHHHhcccc----CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchh
Confidence 3445555554432 35789999999999999999875 79999999 8988886 555566655 678888888
Q ss_pred CCCCCCCceeEEEEcCCCcccc----cchHHHHHHHHhhcCCCcEEEEE
Q 003776 446 RLPFPGIVFDAVHCARCRVPWH----IEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~----~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.++++ ++||+|++.. +.++ ..+..+|.++.|+|||||+|+++
T Consensus 123 ~~~~~-~~~D~Iv~~~--~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 123 DISLP-EKVDVIISEW--MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp GCCCS-SCEEEEEECC--CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcCcC-CcceEEEEcC--hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 88887 8999999964 2222 35678999999999999999864
No 109
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.15 E-value=2.8e-10 Score=122.18 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
+..+|||||||+|.++..|+++ .++++|+ +.++..++.. +...++ .+.+...|.. .|+|. .||+|++...
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRR-FLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHh-hhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 4679999999999999998863 6899999 8888888744 344454 3667777764 45555 8999999874
Q ss_pred Ccccccc--hHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 463 RVPWHIE--GGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 463 ~l~w~~d--~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+|+..+ ...+|++++++|||||+|++......
T Consensus 245 -lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 245 -LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp -GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred -hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 544444 37899999999999999998765443
No 110
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.15 E-value=4.8e-11 Score=129.98 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=84.8
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e 445 (796)
..|.+.|.+.+.. .++.+|||||||+|.++..++++ .|+++|+++ ++..++ +.+...++ .+.+...+..
T Consensus 36 ~~y~~~i~~~l~~----~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 36 GTYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHTGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhcccc----CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchh
Confidence 4456666666543 35789999999999999998875 799999996 776665 44455555 3677788888
Q ss_pred CCCCCCCceeEEEEcCCCccccc-chHHHHHHHHhhcCCCcEEEEE
Q 003776 446 RLPFPGIVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~~-d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.++++ ++||+|++.....++.. .....|.+++|+|||||+++++
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 88776 67999999863233332 4568888999999999999865
No 111
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.14 E-value=8.6e-11 Score=111.71 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=72.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC--------CCCCce
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--------FPGIVF 454 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP--------fpd~SF 454 (796)
.++.+|||+|||+|.++..|+++ .++++|+++ ++.. ..+.+...+...++ +++++|
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 35779999999999999888653 799999998 6422 23566777777766 777899
Q ss_pred eEEEEcCCCcccccch-----------HHHHHHHHhhcCCCcEEEEEeC
Q 003776 455 DAVHCARCRVPWHIEG-----------GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 455 DlVvss~~~l~w~~d~-----------~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|+|+++.. +++.... ..+|.++.++|||||.+++...
T Consensus 90 D~i~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 90 QVVMSDMA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99999764 5544433 6889999999999999998743
No 112
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.14 E-value=4.4e-11 Score=114.41 Aligned_cols=121 Identities=16% Similarity=0.144 Sum_probs=84.0
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcC
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG 443 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d 443 (796)
+......+.+.+.+.+... .+++.+|||+|||+|.++..|+.+ .|+++|+++.++..++... ...++.+.+...+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d 96 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLR--YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENV-RRTGLGARVVALP 96 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHH--CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHH-HHHTCCCEEECSC
T ss_pred CCCCHHHHHHHHHHHHHhh--ccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-HHcCCceEEEecc
Confidence 3344445555555544320 114679999999999999999875 6999999999998887444 3444456667776
Q ss_pred CCC-CCC---CCCceeEEEEcCCCcccccchHHHHHHHH--hhcCCCcEEEEEeC
Q 003776 444 TER-LPF---PGIVFDAVHCARCRVPWHIEGGKLLLELN--RVLRPGGFFIWSAT 492 (796)
Q Consensus 444 ~e~-LPf---pd~SFDlVvss~~~l~w~~d~~~~L~Ei~--RVLKPGG~fv~s~~ 492 (796)
... ++. ..++||+|+++.. ++ .+...++..+. ++|||||+|+++..
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHHHHHhhhccCCceEEEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 543 221 1347999999863 22 45567777777 99999999998854
No 113
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.14 E-value=2e-10 Score=126.72 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=84.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC----CeEEEEcC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI----PAISAVMG 443 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl----~~~~~v~d 443 (796)
.-...+.+.++. ..+.+|||+|||+|.++..++.+ .|+++|+++.++..++.. +...++ .+.+...+
T Consensus 209 ~~~~~ll~~l~~----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n-~~~ngl~~~~~v~~~~~D 283 (375)
T 4dcm_A 209 IGARFFMQHLPE----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN-VETNMPEALDRCEFMINN 283 (375)
T ss_dssp HHHHHHHHTCCC----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHHCGGGGGGEEEEECS
T ss_pred HHHHHHHHhCcc----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHH-HHHcCCCcCceEEEEech
Confidence 334566777764 33589999999999999999864 799999999999888744 444443 25567777
Q ss_pred CCCCCCCCCceeEEEEcCCCccccc-----chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 444 TERLPFPGIVFDAVHCARCRVPWHI-----EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 444 ~e~LPfpd~SFDlVvss~~~l~w~~-----d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
... ++++++||+|+|+.. +++.. ....+|.++.++|||||.|++...
T Consensus 284 ~~~-~~~~~~fD~Ii~npp-fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 284 ALS-GVEPFRFNAVLCNPP-FHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp TTT-TCCTTCEEEEEECCC-C-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhc-cCCCCCeeEEEECCC-cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 654 567789999999874 33221 124689999999999999998743
No 114
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.13 E-value=1.2e-10 Score=116.72 Aligned_cols=118 Identities=11% Similarity=-0.022 Sum_probs=84.2
Q ss_pred cHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCC
Q 003776 369 GALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGT 444 (796)
Q Consensus 369 ~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~ 444 (796)
....+.+.+.+.+... .++.+|||+|||+|.++..++.+ .|+++|+++.++..++ +.+...++ .+.+...|.
T Consensus 37 ~~~~~~~~l~~~l~~~---~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~-~~~~~~~~~~v~~~~~D~ 112 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPV---IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLI-KNLATLKAGNARVVNSNA 112 (202)
T ss_dssp -CHHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHHHHTTCCSEEEECSCH
T ss_pred CHHHHHHHHHHHHHhh---cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHH-HHHHHcCCCcEEEEECCH
Confidence 3344455555554321 13679999999999999976654 7999999999998887 44455565 456677776
Q ss_pred CC-CCCCCCceeEEEEcCCCcccccchHHHHHHHHh--hcCCCcEEEEEeC
Q 003776 445 ER-LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNR--VLRPGGFFIWSAT 492 (796)
Q Consensus 445 e~-LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~R--VLKPGG~fv~s~~ 492 (796)
.. +++..++||+|++... ++ ......++..+.+ +|||||+|+++..
T Consensus 113 ~~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 113 MSFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 44 5666789999999763 23 2356678888865 6999999998844
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.13 E-value=7.2e-11 Score=118.53 Aligned_cols=101 Identities=22% Similarity=0.186 Sum_probs=77.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHH----HcCC-CeEEEEcCCCCCCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL----ERGI-PAISAVMGTERLPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~----ergl-~~~~~v~d~e~LPfpd~SFDlVvs 459 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.|+..+. +.|+ ..++ .+.+.+.+...+|+++++ |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 5779999999999999999874 7999999999987543 2222 2344 467788888999998877 88875
Q ss_pred cCCC--cc--cccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCR--VP--WHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~--l~--w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..+. .+ +..++..+|.++.|+|||||+|+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 4321 11 22356899999999999999999863
No 116
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.13 E-value=9e-10 Score=120.59 Aligned_cols=143 Identities=14% Similarity=0.125 Sum_probs=95.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++... ...++ .+.+...|.. .|++. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELL-TGRGLADRCEILPGDFF-ETIPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhh-hhcCcCCceEEeccCCC-CCCCC-CceEEEhhh
Confidence 35789999999999999999874 7899999 88888887443 34443 3667777765 56665 899999987
Q ss_pred CCcccccchH--HHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHHHHH-HHhhcceeehhhhhhccceeEEEEE
Q 003776 462 CRVPWHIEGG--KLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQL-IKAMCWELVSISKDTINKVGIAVYR 536 (796)
Q Consensus 462 ~~l~w~~d~~--~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~le~l-~~~~~W~~v~~~~~~l~dvG~~L~r 536 (796)
. +|+..+.. .+|++++++|||||+|++............ ..+..+..+ ...........+...+...||.+.+
T Consensus 277 v-lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 277 V-LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp C-GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred h-hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 5 54444443 799999999999999998754433322221 222222111 1122233445555567777887765
No 117
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=3.1e-11 Score=119.30 Aligned_cols=114 Identities=13% Similarity=-0.014 Sum_probs=66.3
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL 447 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L 447 (796)
.+++.+.+.+.. ..++.+|||+|||+|.++..|+.+ .|+++|+++.++..++... ...++.+.+...|...
T Consensus 16 ~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~- 90 (215)
T 4dzr_A 16 VLVEEAIRFLKR---MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA-ERFGAVVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHTT---CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-
T ss_pred HHHHHHHHHhhh---cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHhCCceEEEEcchHh-
Confidence 344555555432 135789999999999999998875 7999999999988877433 3333344445555444
Q ss_pred CCCC-----CceeEEEEcCCCccccc-----------c--------------hHHHHHHHHhhcCCCcE-EEEE
Q 003776 448 PFPG-----IVFDAVHCARCRVPWHI-----------E--------------GGKLLLELNRVLRPGGF-FIWS 490 (796)
Q Consensus 448 Pfpd-----~SFDlVvss~~~l~w~~-----------d--------------~~~~L~Ei~RVLKPGG~-fv~s 490 (796)
++++ ++||+|+++..++.... + ...+|.++.++|||||+ +++.
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5555 89999999754221110 0 06778889999999999 5554
No 118
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.12 E-value=2.4e-10 Score=118.68 Aligned_cols=102 Identities=13% Similarity=0.097 Sum_probs=78.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCC--CCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLP--FPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LP--fpd~SFDlVvss~ 461 (796)
++.+|||+|||+|.++..|+.+ .|+++|+++.++..++. .+...++. +.+...|...++ ++.++||+|+++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~-n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKR-SVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHH-HHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHH-HHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 5789999999999999999875 79999999999988874 44455554 677777776654 5678999999975
Q ss_pred CCccc---c----------------cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 462 CRVPW---H----------------IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 462 ~~l~w---~----------------~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.++.. . .+...+|..+.++|||||+|++..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 42221 0 123578999999999999999863
No 119
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.12 E-value=4.2e-10 Score=133.64 Aligned_cols=115 Identities=15% Similarity=0.222 Sum_probs=88.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHH-----cCC-CeEEE
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALE-----RGI-PAISA 440 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~e-----rgl-~~~~~ 440 (796)
..++.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..|+.+.... .++ .+.+.
T Consensus 708 qRle~LLelL~~----~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 708 QRVEYALKHIRE----SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp HHHHHHHHHHHH----SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred HHHHHHHHHhcc----cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE
Confidence 444555555543 24789999999999999999874 5999999999999887554432 133 36778
Q ss_pred EcCCCCCCCCCCceeEEEEcCCCcccccch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 441 VMGTERLPFPGIVFDAVHCARCRVPWHIEG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 441 v~d~e~LPfpd~SFDlVvss~~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++...+|+++++||+|++... +++..++ ..+|.++.|+|||| +|+++++
T Consensus 784 qGDa~dLp~~d~sFDlVV~~eV-LeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 784 DGSILEFDSRLHDVDIGTCLEV-IEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp ESCTTSCCTTSCSCCEEEEESC-GGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred ECchHhCCcccCCeeEEEEeCc-hhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 8889999999999999999873 5544443 35899999999999 7777744
No 120
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.11 E-value=5.1e-11 Score=115.57 Aligned_cols=114 Identities=14% Similarity=-0.011 Sum_probs=80.6
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCC-
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER- 446 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~- 446 (796)
..+.+.+.+..+ .++.+|||+|||+|.++..|+.+ .|+++|+++.++..++. .+...++. +.+...+...
T Consensus 18 ~~~~~~~~l~~~---~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 18 VRGAIFNMIGPY---FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp CHHHHHHHHCSC---CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHhh---cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcHHHh
Confidence 344444444321 24679999999999999988875 79999999999988873 44445553 5566666544
Q ss_pred CCCCCCceeEEEEcCCCcccccchHHHHHHHH--hhcCCCcEEEEEeC
Q 003776 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELN--RVLRPGGFFIWSAT 492 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~--RVLKPGG~fv~s~~ 492 (796)
++...+.||+|+++.. ++ ......++..+. ++|||||+|++...
T Consensus 94 ~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 94 IDCLTGRFDLVFLDPP-YA-KETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHBCSCEEEEEECCS-SH-HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhhcCCCCEEEECCC-CC-cchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 4444567999999853 21 234567777776 99999999998743
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.11 E-value=3.1e-10 Score=109.27 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=82.8
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERL 447 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~L 447 (796)
......+.+.+.. .++.+|||+|||+|.++..|+.. .|+++|+++.++..++.. +...++ .+.+...+...
T Consensus 21 ~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNL----NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQN-LAKFNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHCC----CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHH-HHHTTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHHcCCCcEEEEECCccc-
Confidence 3444555555542 35779999999999999999864 799999999999888744 444554 35666676654
Q ss_pred CCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
++++++||+|+++.. .+...+|.++.++ |||+|++..
T Consensus 95 ~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEe
Confidence 666789999999873 4678999999999 999999884
No 122
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.11 E-value=2.9e-10 Score=119.93 Aligned_cols=114 Identities=10% Similarity=0.076 Sum_probs=86.3
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISA 440 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~ 440 (796)
|..........+.+.+. ++.+|||+|||+|.++..++.+ .|+++|+++.++..++ +.+...++. +.+.
T Consensus 108 f~~~~~~~~~~l~~~~~------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~-~n~~~n~~~~~v~~~ 180 (278)
T 2frn_A 108 FSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV-ENIHLNKVEDRMSAY 180 (278)
T ss_dssp CCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHH-HHHHHTTCTTTEEEE
T ss_pred EcCCcHHHHHHHHHhCC------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEE
Confidence 44443334444554432 4789999999999999999874 4999999999998887 455556664 5677
Q ss_pred EcCCCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 441 VMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 441 v~d~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.+|...++. .++||+|++... .....++.++.++|||||+|++...
T Consensus 181 ~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 181 NMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 788877766 689999999652 2346889999999999999998744
No 123
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.11 E-value=9.2e-11 Score=122.09 Aligned_cols=97 Identities=20% Similarity=0.131 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||+|||+|.++..+++. .|+++|+++.++..++ +.+...++.+.+...+... +++.++||+|+++. +..
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~-~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~--~~~ 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAE-ANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANL--YAE 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHH-HHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEEC--CHH
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHH-HHHHHcCCcEEEEECChhh-cCcCCCCCEEEECC--cHH
Confidence 4789999999999999988875 7999999999998887 4445566655566665433 24567899999975 221
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 467 HIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 467 ~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
....++.++.++|||||+|+++.
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEe
Confidence 35789999999999999999874
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.11 E-value=5.3e-11 Score=122.08 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=72.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCC-hhhHHHH---HHHHHHHcCCC-eEEEEcCCCCCCCC-CCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFA-PKDEHEA---QVQFALERGIP-AISAVMGTERLPFP-GIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiS-p~dl~~A---~~q~A~ergl~-~~~~v~d~e~LPfp-d~SFDlVv 458 (796)
++.+|||||||+|.++..|+.+ .|+|+|++ +.|+..| + +.+...+++ +.+...+...+|.. ...||.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4779999999999999999843 69999999 6666554 3 223344554 67777888888642 25677777
Q ss_pred EcCCCcccc-------cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 459 CARCRVPWH-------IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 459 ss~~~l~w~-------~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++ +|. .+...+|.+++|+|||||+|++..+
T Consensus 103 ~~~---~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~ 140 (225)
T 3p2e_A 103 ILF---PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTT 140 (225)
T ss_dssp EES---CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EeC---CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEe
Confidence 654 222 1346789999999999999998533
No 125
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.10 E-value=8.4e-12 Score=127.28 Aligned_cols=99 Identities=19% Similarity=0.116 Sum_probs=79.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
++.+|||+|||+|.++..|+.+ .|+++|+++.++..++ +.+...++ .+.+...|...++ ++++||+|+++.. +
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~-~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALAR-NNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP-W 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-C
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-c
Confidence 4789999999999999999876 7999999999998887 44555665 4677788876666 5679999999864 4
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
++..+....+.+++++|+|||++++.
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHH
Confidence 44445556788999999999997753
No 126
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=3.4e-10 Score=122.34 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=84.2
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e 445 (796)
..|.+.|.+.+.. .++.+|||||||+|.++..++++ .|+++|+++ ++..++ +.+...++. +.+...+..
T Consensus 24 ~~y~~ai~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 24 LSYRNAIIQNKDL----FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAK-ELVELNGFSDKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHH----HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhhHhh----cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHH-HHHHHcCCCCCEEEEECchh
Confidence 3455555444332 24679999999999999998875 699999994 777766 444555553 677788888
Q ss_pred CCCCCCCceeEEEEcCC--CcccccchHHHHHHHHhhcCCCcEEEE
Q 003776 446 RLPFPGIVFDAVHCARC--RVPWHIEGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~--~l~w~~d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
.+++++++||+|++... .+.....+..+|.++.|+|||||++++
T Consensus 98 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 98 DVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88888889999999741 122223567899999999999999984
No 127
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.10 E-value=1e-09 Score=119.29 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=76.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++... ...++ .+.+...+... +++. .||+|++..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRF-ADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 35789999999999999998864 6899999 98888887443 34454 36677777643 4443 399999987
Q ss_pred CCcccccch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHIEG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. +|+..+. ..+|++++++|||||+|++...
T Consensus 257 v-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 V-LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp C-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred c-ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4 4443344 4899999999999999998755
No 128
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=2.7e-10 Score=111.19 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC-CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~ 467 (796)
++.+|||+|||+|.++..|+++ .|+++|+++.++.. ...+.+...+... ++++++||+|+++.. +++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~ 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPP-YVPD 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTT
T ss_pred CCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCC-CccC
Confidence 3669999999999999999877 89999999987654 2334667777755 677789999999875 4432
Q ss_pred cc---------hHHHHHHHHhhcCCCcEEEEEe
Q 003776 468 IE---------GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 468 ~d---------~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.+ ...++.++.+.| |||+|++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 22 368899999999 999999874
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.09 E-value=2.4e-10 Score=116.51 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC----CCCCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER----LPFPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~----LPfpd~SFDlVvs 459 (796)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++. .+... ..+.+...+... ++++ ++||+|++
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~ 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD-ACAER-ENIIPILGDANKPQEYANIV-EKVDVIYE 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH-HTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH-HhhcC-CCeEEEECCCCCcccccccC-ccEEEEEE
Confidence 35789999999999999988764 69999999998877763 33322 446667777776 7777 78999995
Q ss_pred cCCCcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 460 s~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
.. ........+|.++.|+|||||+|++.
T Consensus 150 ~~---~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DV---AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CC---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ec---CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 32 11112267899999999999999986
No 130
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.09 E-value=3.9e-10 Score=114.81 Aligned_cols=99 Identities=18% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC---CCCCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---LPFPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~---LPfpd~SFDlVvs 459 (796)
.++.+|||+|||+|.++..|+++ .|+++|+++.++..+. +.|+.+ ..+.+...+... +|+.+++||+|++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 35789999999999999988763 6999999998776554 555554 445677777655 5666789999999
Q ss_pred cCCCcccccc-hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVPWHIE-GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~w~~d-~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
... ..+ ...++.++.++|||||+|+++..
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 652 222 34568889999999999998743
No 131
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.09 E-value=2.4e-10 Score=124.00 Aligned_cols=112 Identities=14% Similarity=0.099 Sum_probs=84.6
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP 448 (796)
..+.+.+.++. ....+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++...+...+...
T Consensus 184 ~~~~ll~~l~~----~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~~~~~~d~~~-- 256 (343)
T 2pjd_A 184 GSQLLLSTLTP----HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRAT-LAANGVEGEVFASNVFS-- 256 (343)
T ss_dssp HHHHHHHHSCT----TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHH-HHHTTCCCEEEECSTTT--
T ss_pred HHHHHHHhcCc----CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHhCCCCEEEEccccc--
Confidence 34566666642 23568999999999999998763 799999999999888744 44566666666666544
Q ss_pred CCCCceeEEEEcCCCccc----c-cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 449 FPGIVFDAVHCARCRVPW----H-IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 449 fpd~SFDlVvss~~~l~w----~-~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+.+++||+|+++.. +|+ + .+...+|.++.|+|||||.|++...
T Consensus 257 ~~~~~fD~Iv~~~~-~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 257 EVKGRFDMIISNPP-FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp TCCSCEEEEEECCC-CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCCeeEEEECCC-cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 34679999999874 443 2 2457899999999999999998754
No 132
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.09 E-value=7.1e-10 Score=121.14 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=78.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCC--CCCCCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL--PFPGIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~L--Pfpd~SFDlVvss 460 (796)
...+|||||||+|.++..|+++ .++++|+ +.++..++.. +...++ .+.+...|.... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQ-TAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHH-HTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHH-HHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4689999999999999999863 6999999 8888777633 333443 366777777554 676 789999998
Q ss_pred CCCccccc-chHHHHHHHHhhcCCCcEEEEEeCCCCC
Q 003776 461 RCRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPVYQ 496 (796)
Q Consensus 461 ~~~l~w~~-d~~~~L~Ei~RVLKPGG~fv~s~~~~~~ 496 (796)
..+.+|.. +...+|++++|+|||||+|++.......
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 75223332 3358899999999999999987654433
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.09 E-value=3.2e-10 Score=112.47 Aligned_cols=95 Identities=17% Similarity=0.044 Sum_probs=76.5
Q ss_pred CCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 390 TRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
+.+|||+|||+|.++..|+.. .|+++|+++.++..++ +.+...++. +.+...+...++ +.++||+|++.. +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--~ 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLR-QVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--F 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC--S
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec--c
Confidence 679999999999999988753 7999999999988887 444455554 667777776665 457899999864 2
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.+...+|.++.++|+|||+|++..
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 357799999999999999999873
No 134
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.08 E-value=8.6e-11 Score=118.50 Aligned_cols=110 Identities=11% Similarity=0.170 Sum_probs=83.2
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~ 446 (796)
..+++.+...++ +..+|||||||+|.++..++.. .|+++|+++.|+..++ +++...|+...+.+.+...
T Consensus 37 d~fY~~~~~~l~------~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar-~~~~~~g~~~~v~~~d~~~ 109 (200)
T 3fzg_A 37 NDFYTYVFGNIK------HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLS-SIIGKLKTTIKYRFLNKES 109 (200)
T ss_dssp HHHHHHHHHHSC------CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHH-HHHHHSCCSSEEEEECCHH
T ss_pred HHHHHHHHhhcC------CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCccEEEecccc
Confidence 344555666664 3789999999999999999543 8999999999999988 4566667764444455433
Q ss_pred CCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEE
Q 003776 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
. .+.++||+|++.. .+|...+....+..+++.|||||+||-
T Consensus 110 ~-~~~~~~DvVLa~k-~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 110 D-VYKGTYDVVFLLK-MLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp H-HTTSEEEEEEEET-CHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred c-CCCCCcChhhHhh-HHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 2 4568899999976 366554667788899999999999993
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.08 E-value=4.4e-10 Score=108.78 Aligned_cols=110 Identities=19% Similarity=0.197 Sum_probs=80.7
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCC
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP 448 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LP 448 (796)
....+.+.+.. .++.+|||+|||+|.++..|+.. .|+++|+++.++..++.. +...++ .+.+...+... +
T Consensus 21 ~~~~~~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 21 VRCLIMCLAEP----GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN-LQRHGLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp HHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCTTEEEEESCHHH-H
T ss_pred HHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH-HHHcCCCcceEEEecCHHH-h
Confidence 33444444432 35789999999999999999875 799999999998888744 344454 45566666533 2
Q ss_pred CCC-CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 449 FPG-IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 449 fpd-~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++. +.||+|++... ++ +...+|.++.++|+|||++++...
T Consensus 95 ~~~~~~~D~v~~~~~-~~---~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGS-GG---ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HTTSCCEEEEEESCC-TT---CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cccCCCCCEEEECCc-hH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 332 58999999763 22 468999999999999999998743
No 136
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.08 E-value=1.5e-09 Score=116.10 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=70.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEE-cCCCCCC---CCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAV-MGTERLP---FPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v-~d~e~LP---fpd~SFDlVvss~ 461 (796)
.+.+|||||||||.++..|+++ .|+|+|+++.|++.+. +....+.... .+...++ ++..+||+|++..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~-----r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL-----RQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH-----HTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH-----HhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 4679999999999999988875 7999999999987643 2222222221 2222332 3445699999976
Q ss_pred CCcccccchHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+ ++ .+..+|.+++|+|||||.|++...|.+
T Consensus 160 s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPqf 189 (291)
T 3hp7_A 160 S-FI---SLNLILPALAKILVDGGQVVALVKPQF 189 (291)
T ss_dssp S-SS---CGGGTHHHHHHHSCTTCEEEEEECGGG
T ss_pred e-Hh---hHHHHHHHHHHHcCcCCEEEEEECccc
Confidence 4 32 468999999999999999998755433
No 137
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.07 E-value=7.3e-10 Score=118.46 Aligned_cols=102 Identities=13% Similarity=0.089 Sum_probs=74.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHc-----CCCeEEEEcCCC-CCCCCCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTE-RLPFPGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~er-----gl~~~~~v~d~e-~LPfpd~SFDlVv 458 (796)
.+.+|||||||+|.++..|++. .|+++|+++.++..++..+.... ...+.+.+.|.. .++...++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4789999999999999999875 69999999999988885544331 234566777753 3455678999999
Q ss_pred EcCCCcccccc----hHHHHHHHHhhcCCCcEEEEEe
Q 003776 459 CARCRVPWHIE----GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 459 ss~~~l~w~~d----~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+... .++... ...++.++.|+|||||+|++..
T Consensus 163 ~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9653 333321 1679999999999999999864
No 138
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.07 E-value=4.8e-10 Score=113.34 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=78.7
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
.....+.+.+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++... ...+ .+.+...+......
T Consensus 57 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~-~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDELDL----HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLL-SYYN-NIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTCS-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHH-hhcC-CeEEEECCcccccc
Confidence 344555565542 35779999999999999999874 8999999999888776333 2233 56677777655322
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++||+|++..+ +++.. .++.++|||||+|++..+
T Consensus 131 ~~~~fD~v~~~~~-~~~~~------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 131 EEKPYDRVVVWAT-APTLL------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp GGCCEEEEEESSB-BSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred cCCCccEEEECCc-HHHHH------HHHHHHcCCCcEEEEEEc
Confidence 4678999999864 44322 479999999999998844
No 139
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.06 E-value=4.3e-10 Score=111.11 Aligned_cols=91 Identities=14% Similarity=0.204 Sum_probs=68.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC------CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC--------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-------------- 448 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~------~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP-------------- 448 (796)
++.+|||||||+|.++..|+++ .|+|+|+++.. ....+.+...+...++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 4679999999999999988753 59999999831 1123466777776666
Q ss_pred -----------CCCCceeEEEEcCCCcccc----cchH-------HHHHHHHhhcCCCcEEEEEe
Q 003776 449 -----------FPGIVFDAVHCARCRVPWH----IEGG-------KLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 449 -----------fpd~SFDlVvss~~~l~w~----~d~~-------~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+++++||+|+|..+ +++. .+.. .+|.++.++|||||.|++..
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 56789999999764 4442 1222 37899999999999999864
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.06 E-value=3.2e-09 Score=111.19 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh----CCeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGT 444 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~----~~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~ 444 (796)
....++.+.+.++ .++.+|||+|||+|.++..|+. ..|+++|+++.++..++. .+...++. +.+...+.
T Consensus 95 te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~-n~~~~~~~~v~~~~~d~ 168 (276)
T 2b3t_A 95 TECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQR-NAQHLAIKNIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCST
T ss_pred HHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEcch
Confidence 3445555655553 2467999999999999998884 379999999999988874 44445654 56666665
Q ss_pred CCCCCCCCceeEEEEcCCCccc-----------c-------------cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 445 ERLPFPGIVFDAVHCARCRVPW-----------H-------------IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 445 e~LPfpd~SFDlVvss~~~l~w-----------~-------------~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.. +++.++||+|+++..++.. | .....++.++.++|||||++++..
T Consensus 169 ~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 169 FS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44 3446789999998543221 1 123678899999999999999873
No 141
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.06 E-value=4.2e-10 Score=113.79 Aligned_cols=101 Identities=17% Similarity=0.108 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC-CCCCCC-----CCcee
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT-ERLPFP-----GIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~-e~LPfp-----d~SFD 455 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++. +.+...+. ..++.. .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQM-LNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH-HHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH-HHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3679999999999999999873 799999999999888744 4444553 56677765 223322 27899
Q ss_pred EEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 456 lVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+|++... .++..+...++..+ ++|||||+|++...
T Consensus 137 ~V~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 137 MVFLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEEECSC-GGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEEcCC-cccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 9999753 34343445677777 99999999998643
No 142
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=2.4e-10 Score=119.05 Aligned_cols=98 Identities=18% Similarity=0.014 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCCC---CCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFP---GIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPfp---d~SFDlVvs 459 (796)
..+.+|||||||+|.++..|+.. .|+++|+++.++..++ +.+...++. +.+...+.+.++.. .++||+|+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVE-RAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHH-HHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 35789999999999998888753 7999999999998887 445555664 66777777666643 479999999
Q ss_pred cCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.. + .+...++..+.++|||||+|++..
T Consensus 158 ~a--~---~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 158 RA--V---APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ES--S---CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CC--c---CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 64 3 256789999999999999998753
No 143
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.06 E-value=2.3e-09 Score=114.94 Aligned_cols=100 Identities=14% Similarity=0.036 Sum_probs=76.3
Q ss_pred CEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHc-CCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 391 RVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-GIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 391 ~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~er-gl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
.+|||||||+|.++..|+++ .++++|+ +.++..++....... ...+.+...+... +++ +.||+|++... +|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~v-l~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRI-IG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESC-GG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchh-cc
Confidence 89999999999999998864 6999999 989888875443321 2236677777655 565 67999999874 44
Q ss_pred cccch--HHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 466 WHIEG--GKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 466 w~~d~--~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
...+. ..+|++++++|||||+|++.....
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 33333 489999999999999999886543
No 144
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.05 E-value=8.6e-10 Score=112.97 Aligned_cols=99 Identities=18% Similarity=0.149 Sum_probs=79.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..++.......+. .+.+...+...+++++++||+|++..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL 174 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC
Confidence 45789999999999999888754 7999999999998887554443143 45677778777788888999999853
Q ss_pred CCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++..+|.++.++|||||++++..+
T Consensus 175 ------~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 175 ------MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 2566899999999999999998753
No 145
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.05 E-value=4e-10 Score=119.49 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=73.3
Q ss_pred CCEEEEECCCCch----hHHHHhh--------CCeEEEeCChhhHHHHHHHHH-------------HH---------cC-
Q 003776 390 TRVVLDVGCGVAS----FGGFLFD--------RGVLTMSFAPKDEHEAQVQFA-------------LE---------RG- 434 (796)
Q Consensus 390 ~~~VLDIGCGtG~----~a~~La~--------~~V~gvDiSp~dl~~A~~q~A-------------~e---------rg- 434 (796)
..+|||+|||||. ++..|++ ..|+|+|+++.++..|+...- .+ .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5799999999997 5555553 269999999999988874310 00 00
Q ss_pred --------CCeEEEEcCCCCCCCC-CCceeEEEEcCCCcccccch--HHHHHHHHhhcCCCcEEEEE
Q 003776 435 --------IPAISAVMGTERLPFP-GIVFDAVHCARCRVPWHIEG--GKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 435 --------l~~~~~v~d~e~LPfp-d~SFDlVvss~~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s 490 (796)
-.+.+...+....|++ .+.||+|+|... +++..+. ..+|.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv-liyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV-MIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS-GGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc-hHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1356677777666665 578999999763 5544433 68999999999999999985
No 146
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.05 E-value=1.8e-09 Score=116.95 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++.. +...++ .+.+...|... +++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSY-LKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHH-HHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHH-HHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc
Confidence 35689999999999999988864 5788898 8888888744 344455 36677777643 4443 499999987
Q ss_pred CCcccccch--HHHHHHHHhhcCCCcEEEEEeCC
Q 003776 462 CRVPWHIEG--GKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 462 ~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
. +|+..+. ..+|+++.++|||||+|++....
T Consensus 258 v-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 258 V-LLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp C-GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred c-ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 4 4433333 58999999999999999987554
No 147
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.05 E-value=6.5e-10 Score=124.99 Aligned_cols=118 Identities=9% Similarity=-0.017 Sum_probs=83.0
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHH--HH----HHHHHcC--C-Ce
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEA--QV----QFALERG--I-PA 437 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A--~~----q~A~erg--l-~~ 437 (796)
...+..+.+.+.. .++.+|||||||+|.++..|+.. .|+|+|+++.++..| +. +.+...| . .+
T Consensus 228 p~~v~~ml~~l~l----~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 228 PNFLSDVYQQCQL----KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHHTTC----CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHHhcCC----CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 3444555555542 45789999999999999998873 599999999988877 22 3333446 2 34
Q ss_pred EEEEcCCCCC--CC--CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 438 ISAVMGTERL--PF--PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 438 ~~~v~d~e~L--Pf--pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
.+..++.... ++ ..++||+|+++.. + +..++..+|.++.|+|||||+|++..++.
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred EEEEcCccccccccccccCCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 5555544322 22 2478999999753 3 44678889999999999999999864443
No 148
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.05 E-value=1.4e-09 Score=118.05 Aligned_cols=101 Identities=16% Similarity=0.243 Sum_probs=79.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++... ...++. +.+...|...+|++.. |+|++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~ 264 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENA-AEKGVADRMRGIAVDIYKESYPEA--DAVLFCR 264 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHH-HHTTCTTTEEEEECCTTTSCCCCC--SEEEEES
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHH-HhcCCCCCEEEEeCccccCCCCCC--CEEEEec
Confidence 35789999999999999999864 7899999 99998887444 344443 6777788877777754 9999987
Q ss_pred CCcccccc--hHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 462 CRVPWHIE--GGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 462 ~~l~w~~d--~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
. +|...+ ...+|++++++|||||+|++....
T Consensus 265 v-lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 265 I-LYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp C-GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred h-hccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 4 443334 688999999999999999877543
No 149
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=4.5e-10 Score=114.85 Aligned_cols=114 Identities=9% Similarity=0.107 Sum_probs=82.5
Q ss_pred cHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC---eEEE
Q 003776 369 GALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP---AISA 440 (796)
Q Consensus 369 ~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~ 440 (796)
....++..+....+. ++..+|||||||+|..+..|+.+ .|+++|+++.++..++ +.....++. +.+.
T Consensus 40 ~~~~~l~~l~~~~~~----~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~-~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 40 MTGQLLTTLAATTNG----NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAK-ALFREAGYSPSRVRFL 114 (221)
T ss_dssp HHHHHHHHHHHHSCC----TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHH-HHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHhhCC----CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCcCcEEEE
Confidence 344555555554332 23459999999999999988762 7999999999998887 444455654 5666
Q ss_pred EcCCCC-CC-CCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 441 VMGTER-LP-FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 441 v~d~e~-LP-fpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.+++.. ++ +++++||+|++.. +..+...+|.++.|+|||||+|++..
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQV----SPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECC----CTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred EcCHHHHHHHhcCCCcCeEEEcC----cHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 666532 33 3468999999864 23356789999999999999999863
No 150
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.04 E-value=7.8e-10 Score=118.15 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=79.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
+..+|||||||+|.++..|+++ .++++|++ .++..++.... ..++. +.+...+....+++.+ ||+|++...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 4689999999999999998864 79999999 88888874443 34443 6777788777777755 999999874
Q ss_pred Cccccc--chHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 463 RVPWHI--EGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 463 ~l~w~~--d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+++.. +...+|+++.++|||||++++.....
T Consensus 242 -l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 242 -LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp -GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred -hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 44332 34799999999999999988875543
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.04 E-value=7e-10 Score=115.52 Aligned_cols=108 Identities=16% Similarity=0.090 Sum_probs=83.6
Q ss_pred HHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcC---CCeEEEEcCCCC
Q 003776 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERG---IPAISAVMGTER 446 (796)
Q Consensus 375 d~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~erg---l~~~~~v~d~e~ 446 (796)
..+...+.. .++.+|||+|||+|.++..|+.+ .|+++|+++.++..++...+...+ ..+.+...+...
T Consensus 89 ~~i~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 89 AQIVHEGDI----FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHcCC----CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 344444442 35779999999999999988763 799999999999888755544313 346677778777
Q ss_pred CCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++++++||+|++.. .++..+|.++.++|||||+|++..+
T Consensus 165 ~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 165 SELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred cCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 888888999999853 2566899999999999999998754
No 152
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.04 E-value=1.3e-09 Score=117.81 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=77.3
Q ss_pred CCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCC-CCCCceeEEEEcCC
Q 003776 390 TRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLP-FPGIVFDAVHCARC 462 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LP-fpd~SFDlVvss~~ 462 (796)
..+|||||||+|.++..|+++ .++++|+ +.++..++.. +...++. +.+...+....+ +.++.||+|++...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKT-IHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH-HHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHH-HHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 789999999999999999864 7899999 7788777643 3444542 567777776655 23466999999874
Q ss_pred Ccccccch--HHHHHHHHhhcCCCcEEEEEeCC
Q 003776 463 RVPWHIEG--GKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 463 ~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
+|+..+. ..+|++++++|||||+|++....
T Consensus 258 -lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 258 -LHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp -GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 5444433 79999999999999999987543
No 153
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.04 E-value=4.6e-10 Score=114.77 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=78.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC-CC-CCCCceeEEEEc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LP-FPGIVFDAVHCA 460 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~-LP-fpd~SFDlVvss 460 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++ +.+...++ .+.+...+... +| ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAK-QNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHH-HHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4679999999999999999872 7999999999998887 44445565 36777777644 44 446899999986
Q ss_pred CCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 461 ~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. +......+|.++.++|||||+|++...
T Consensus 150 ~----~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 A----AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp T----TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred C----cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 4 234577899999999999999998643
No 154
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.04 E-value=8.2e-10 Score=113.43 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=80.8
Q ss_pred HHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCC
Q 003776 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (796)
Q Consensus 375 d~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~L 447 (796)
..+...+.. .++.+|||+|||+|.++..|+.+ .|+++|+++.++..|+... ...++. +.+...|...
T Consensus 83 ~~i~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~- 156 (255)
T 3mb5_A 83 ALIVAYAGI----SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENI-KWAGFDDRVTIKLKDIYE- 156 (255)
T ss_dssp HHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH-HHHTCTTTEEEECSCGGG-
T ss_pred HHHHHhhCC----CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHH-HHcCCCCceEEEECchhh-
Confidence 344454442 45789999999999999988754 7999999999998887444 444544 5666666653
Q ss_pred CCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++++||+|++.. .++..+|.++.++|||||+|++..+
T Consensus 157 ~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 GIEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ccCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 37778999999854 2567899999999999999998743
No 155
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.03 E-value=1e-09 Score=117.70 Aligned_cols=108 Identities=17% Similarity=0.052 Sum_probs=81.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--C---eEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--G---VLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTE 445 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~---V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e 445 (796)
...+.+.+.+.. .++.+|||||||+|.++..|++. . |+++|+++.++..++. .+...++. +.+...+..
T Consensus 62 ~~~~~l~~~l~~----~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~g~~~v~~~~~d~~ 136 (317)
T 1dl5_A 62 SLMALFMEWVGL----DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR-NVERLGIENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCeEEEECChh
Confidence 344556665543 45789999999999999998864 4 9999999999988874 44455554 566777776
Q ss_pred CCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..+.+.++||+|++... +++.. .++.++|||||++++..
T Consensus 137 ~~~~~~~~fD~Iv~~~~-~~~~~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVG-VDEVP------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp GCCGGGCCEEEEEECSB-BSCCC------HHHHHHEEEEEEEEEEB
T ss_pred hccccCCCeEEEEEcCC-HHHHH------HHHHHhcCCCcEEEEEE
Confidence 65555678999999864 44322 57899999999999874
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.02 E-value=2e-09 Score=107.54 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=77.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTE 445 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e 445 (796)
.....+.+.+.. .++.+|||||||+|.++..|+. ..|+++|+++.++..++.... ..++. +.+...+..
T Consensus 64 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 64 HMVGMMCELLDL----KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLR-KLGYDNVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEESCGG
T ss_pred HHHHHHHHhhCC----CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCeEEEECCcc
Confidence 334455555542 3578999999999999988875 369999999999988874443 33443 556666653
Q ss_pred CCCCC-CCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 446 RLPFP-GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 446 ~LPfp-d~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. +++ .++||+|++..+ +++.. .++.++|||||+|++...
T Consensus 139 ~-~~~~~~~fD~v~~~~~-~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 L-GYEPLAPYDRIYTTAA-GPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp G-CCGGGCCEEEEEESSB-BSSCC------HHHHHTEEEEEEEEEEES
T ss_pred c-CCCCCCCeeEEEECCc-hHHHH------HHHHHHcCCCcEEEEEEC
Confidence 2 333 578999999874 44332 489999999999998744
No 157
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.02 E-value=9.3e-10 Score=113.33 Aligned_cols=102 Identities=20% Similarity=0.203 Sum_probs=77.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHc-------CC-CeEEEEcCCCC-CC--CCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-------GI-PAISAVMGTER-LP--FPGIV 453 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~er-------gl-~~~~~v~d~e~-LP--fpd~S 453 (796)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++......+ ++ .+.+...|+.. ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999998864 69999999999988875443321 44 46677777754 66 77899
Q ss_pred eeEEEEcCCCcccccc--------hHHHHHHHHhhcCCCcEEEEEe
Q 003776 454 FDAVHCARCRVPWHIE--------GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 454 FDlVvss~~~l~w~~d--------~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
||.|+..+. -.|... ...+|.++.++|||||+|++.+
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 999997653 233210 1489999999999999999863
No 158
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.02 E-value=1.3e-10 Score=120.01 Aligned_cols=93 Identities=10% Similarity=0.027 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEc-CC-----CCCCCCCCceeEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVM-GT-----ERLPFPGIVFDAVH 458 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~-d~-----e~LPfpd~SFDlVv 458 (796)
..+.+|||||||+|.++..|+++ .|+|+|+++.|+..+. ++......... +. ..++. ..||.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~ 108 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKI-----RSDERVVVMEQFNFRNAVLADFEQ--GRPSFTS 108 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHH-----HTCTTEEEECSCCGGGCCGGGCCS--CCCSEEE
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHH-----HhCccccccccceEEEeCHhHcCc--CCCCEEE
Confidence 34679999999999999999875 6999999999987654 22222111110 11 22221 1234443
Q ss_pred EcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 459 ss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+...++ ....+|.+++|+|||||+|++..
T Consensus 109 ~D~v~~----~l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 109 IDVSFI----SLDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ECCSSS----CGGGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEhh----hHHHHHHHHHHhccCCCEEEEEE
Confidence 332111 13689999999999999999864
No 159
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.02 E-value=8e-10 Score=114.35 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=77.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCC-CCCC--CCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LPFP--GIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~-LPfp--d~SFDlVv 458 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++. .+...++. +.+...++.. ++.. .++||+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE-NLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4689999999999999999864 79999999999988874 44455554 6677777533 4432 34899999
Q ss_pred EcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 459 ss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
+.. +..+...+|.++.++|||||+|++....
T Consensus 142 ~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDA----DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECS----CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECC----chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 864 2345678999999999999999987443
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=7.9e-10 Score=115.41 Aligned_cols=103 Identities=13% Similarity=0.004 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH---cCCC--eEEEEcCCCCC-------CCCCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE---RGIP--AISAVMGTERL-------PFPGI 452 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e---rgl~--~~~~v~d~e~L-------Pfpd~ 452 (796)
++.+|||+|||+|.++..|+.+ .|+++|+++.++..++.. +.. .++. +.+...|...+ +++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n-~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRS-LELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHH-TTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 4679999999999999988764 799999999988887743 333 3443 56777777665 36778
Q ss_pred ceeEEEEcCCCccc----------------c-cchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 453 VFDAVHCARCRVPW----------------H-IEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 453 SFDlVvss~~~l~w----------------~-~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+||+|+++..+... . .....+|..+.++|||||+|++...
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999998532211 1 1357889999999999999998643
No 161
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.00 E-value=2.2e-09 Score=116.90 Aligned_cols=146 Identities=14% Similarity=0.127 Sum_probs=93.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c---CCCeEEEEcCCCCC-C-CCCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTERL-P-FPGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r---gl~~~~~v~d~e~L-P-fpd~SFDlVv 458 (796)
.+.+|||||||+|.++..|+++ .|+++|+++.++..|+..+... . ...+.+...|.... + +++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4689999999999999999875 7999999999998887554331 1 23466777775332 2 3467899999
Q ss_pred EcCCCccccc-c---hHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHhhc---ceeehhhhhhcccee
Q 003776 459 CARCRVPWHI-E---GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC---WELVSISKDTINKVG 531 (796)
Q Consensus 459 ss~~~l~w~~-d---~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~le~l~~~~~---W~~v~~~~~~l~dvG 531 (796)
+... .+++. . ...+|.++.|+|||||+|++.....+.........+..+...-.... +..+..+. ...+|
T Consensus 200 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~--~g~~g 276 (334)
T 1xj5_A 200 VDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYP--SGVIG 276 (334)
T ss_dssp ECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSG--GGEEE
T ss_pred ECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCccc--CCceE
Confidence 9652 23332 1 36899999999999999998743333333223333333322211011 22233332 25677
Q ss_pred EEEEEe
Q 003776 532 IAVYRK 537 (796)
Q Consensus 532 ~~L~rk 537 (796)
|.+..+
T Consensus 277 f~~as~ 282 (334)
T 1xj5_A 277 FMLCST 282 (334)
T ss_dssp EEEEEC
T ss_pred EEEccc
Confidence 877664
No 162
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.00 E-value=9e-10 Score=111.12 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=74.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC------CeEEEEcCCCCCCCCCCceeE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI------PAISAVMGTERLPFPGIVFDA 456 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl------~~~~~v~d~e~LPfpd~SFDl 456 (796)
.++.+|||||||+|.++..|++. .|+++|+++.++..++.... ..++ .+.+...+....+.+.++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR-KDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH-hhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 35789999999999999988752 79999999999988874443 3322 456677776655555678999
Q ss_pred EEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 457 Vvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|++... ++ .++.++.++|||||+|+++..
T Consensus 155 i~~~~~-~~------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAA-AP------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSB-BS------SCCHHHHHTEEEEEEEEEEES
T ss_pred EEECCc-hH------HHHHHHHHhcCCCcEEEEEEe
Confidence 999763 22 234689999999999999754
No 163
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.99 E-value=9.7e-10 Score=115.21 Aligned_cols=97 Identities=12% Similarity=0.190 Sum_probs=76.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHc-CC-CeEEEEcCCCCCCCCCCceeEEEEc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER-GI-PAISAVMGTERLPFPGIVFDAVHCA 460 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~er-gl-~~~~~v~d~e~LPfpd~SFDlVvss 460 (796)
.++.+|||+|||+|.++..|++. .|+++|+++.++..++... ... +. .+.+...+... ++++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL-SEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH-HTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH-HhcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 45789999999999999888753 7999999999988887443 333 44 35666677655 6777899999984
Q ss_pred CCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 461 ~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. +++..+|.++.++|||||+|++..+
T Consensus 187 ~------~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 187 I------PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp C------SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 3567899999999999999998854
No 164
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.99 E-value=2.1e-09 Score=108.61 Aligned_cols=98 Identities=15% Similarity=0.162 Sum_probs=72.3
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC---CCCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL---PFPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L---Pfpd~SFDlVvs 459 (796)
.++.+|||+|||+|.++..|++ ..|+++|+++.++..+. +.+... ..+.+...+.... +...++||+|++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 3577999999999999998875 37999999998887665 333333 3466777776552 112358999998
Q ss_pred cCCCcccccch-HHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHIEG-GKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~d~-~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
... ..+. ..+|.++.++|||||+|++..
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 652 2333 355999999999999999873
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.98 E-value=6e-10 Score=114.76 Aligned_cols=102 Identities=17% Similarity=0.032 Sum_probs=71.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC------CeEEEeCChhhHHHHHHHHHHHc--CCC------------------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALER--GIP------------------------ 436 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~------~V~gvDiSp~dl~~A~~q~A~er--gl~------------------------ 436 (796)
...+|||+|||+|.++..|+.+ .|+|+|+++.++..|+....... ++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999888753 79999999999988874332110 110
Q ss_pred ---eE-------------EEEcCCCCCCC-----CCCceeEEEEcCCCcccc--------cchHHHHHHHHhhcCCCcEE
Q 003776 437 ---AI-------------SAVMGTERLPF-----PGIVFDAVHCARCRVPWH--------IEGGKLLLELNRVLRPGGFF 487 (796)
Q Consensus 437 ---~~-------------~~v~d~e~LPf-----pd~SFDlVvss~~~l~w~--------~d~~~~L~Ei~RVLKPGG~f 487 (796)
+. +...+...... ...+||+|+|+..++... .....+|.++.++|||||+|
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22 66676644221 345899999976322211 12358999999999999999
Q ss_pred EEE
Q 003776 488 IWS 490 (796)
Q Consensus 488 v~s 490 (796)
++.
T Consensus 211 ~~~ 213 (250)
T 1o9g_A 211 AVT 213 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 985
No 166
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.98 E-value=2.9e-09 Score=110.40 Aligned_cols=111 Identities=12% Similarity=0.046 Sum_probs=77.2
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP 448 (796)
...|...+..+. ..++.+|||+|||+|.++..|++. .|+++|+++.|+.... +.++++ ..+.+.+.|+....
T Consensus 62 a~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~-~~a~~r-~nv~~i~~Da~~~~ 138 (232)
T 3id6_C 62 AGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELL-LVAQRR-PNIFPLLADARFPQ 138 (232)
T ss_dssp HHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHH-HHHHHC-TTEEEEECCTTCGG
T ss_pred HHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHH-HHhhhc-CCeEEEEcccccch
Confidence 345555555322 246889999999999999988763 7999999998865433 444444 35667777765432
Q ss_pred ---CCCCceeEEEEcCCCcccccchHHHH-HHHHhhcCCCcEEEEEe
Q 003776 449 ---FPGIVFDAVHCARCRVPWHIEGGKLL-LELNRVLRPGGFFIWSA 491 (796)
Q Consensus 449 ---fpd~SFDlVvss~~~l~w~~d~~~~L-~Ei~RVLKPGG~fv~s~ 491 (796)
...++||+|++..+ . ++....| ..+.++|||||+|+++.
T Consensus 139 ~~~~~~~~~D~I~~d~a-~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 139 SYKSVVENVDVLYVDIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp GTTTTCCCEEEEEECCC-C---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccccceEEEEecCC-C---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 12468999999863 2 3444444 55677999999999884
No 167
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.97 E-value=1.2e-09 Score=118.45 Aligned_cols=141 Identities=13% Similarity=-0.029 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcC--CCeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERG--IPAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~erg--l~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.+..+|||||||+|.++..|+++ .++++|++. ++. + +.+...+ ..+.+...|.. .++| +||+|++..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~-~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R-HRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T-CCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c-ccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh
Confidence 35789999999999999999874 578888843 322 1 1111112 23566777764 4455 899999987
Q ss_pred CCcccccch--HHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHHHHHH-HhhcceeehhhhhhccceeEEEEE
Q 003776 462 CRVPWHIEG--GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLI-KAMCWELVSISKDTINKVGIAVYR 536 (796)
Q Consensus 462 ~~l~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~le~l~-~~~~W~~v~~~~~~l~dvG~~L~r 536 (796)
. +|+..+. ..+|++++|+|||||+|++...............+..+..+. ..........+...+.+.||.+.+
T Consensus 256 v-lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 256 I-LHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp C-GGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred h-ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 4 5544444 699999999999999999876543332111111111111111 111122344455566777776655
No 168
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.97 E-value=4.7e-10 Score=124.61 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=74.4
Q ss_pred CCCEEEEECCC------CchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCC------C
Q 003776 389 RTRVVLDVGCG------VASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP------G 451 (796)
Q Consensus 389 ~~~~VLDIGCG------tG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfp------d 451 (796)
+..+||||||| +|..+..++. ..|+++|+++.|. .....+.+.++|...+||. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 46899999999 7766665553 3799999999873 1234578888999998887 7
Q ss_pred CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 452 ~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
++||+|+|.. .|+..+...+|.+++|+|||||+|++..
T Consensus 287 ~sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 287 GPFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CCEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999999975 4555578899999999999999999974
No 169
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=8.6e-10 Score=111.02 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC-CCCCC-C----CCcee
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT-ERLPF-P----GIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~-e~LPf-p----d~SFD 455 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++. +.+...+. ..++. . .++||
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEY-WEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH-HHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3679999999999999999864 699999999999888744 4455554 56667665 22321 1 17899
Q ss_pred EEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 456 lVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+|++.. +..+...+|.++.++|||||+|++...
T Consensus 143 ~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999754 244678899999999999999998744
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=2.7e-09 Score=108.90 Aligned_cols=107 Identities=19% Similarity=0.187 Sum_probs=76.7
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh---CCeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCC
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP 448 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~---~~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LP 448 (796)
....+.+.+.. .++.+|||||||+|.++..|++ ..|+++|+++.++..++... ...++. +.+...+. ..+
T Consensus 79 ~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 79 MVAIMLEIANL----KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNL-ERAGVKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHTC----CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCG-GGC
T ss_pred HHHHHHHhcCC----CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH-HHcCCCCcEEEECCc-ccC
Confidence 34445554432 3577999999999999998876 48999999999988887443 344543 45556665 455
Q ss_pred CCCC-ceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 449 FPGI-VFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 449 fpd~-SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++.. .||+|++... +++.. .++.++|||||+|++...
T Consensus 153 ~~~~~~fD~Ii~~~~-~~~~~------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAG-APKIP------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CGGGCCEEEEEECSB-BSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCccEEEECCc-HHHHH------HHHHHhcCCCcEEEEEEe
Confidence 6544 4999999863 43322 478999999999999854
No 171
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.96 E-value=4.2e-09 Score=114.55 Aligned_cols=103 Identities=17% Similarity=0.013 Sum_probs=81.5
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|.++..++. ..|+|+|+++.++..|+ +.+...|+ .+.+...|...++.+...||+|+++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~-~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAR-EAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHH-HHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHH-HHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 3577999999999999888775 48999999999998887 55556666 46788888888888778899999975
Q ss_pred CCccccc--------chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHI--------EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~--------d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. ..+.. ....++.++.++|||||.+++.++
T Consensus 281 P-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 281 P-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp C-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred C-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 22211 125788999999999999998743
No 172
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.95 E-value=5e-09 Score=106.60 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~~ 463 (796)
.++.+|||+|||+|.++..|+++ .|+++|+++.++..++... ...++ .+.+...+.....++++.||+|++..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL-KKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH-HHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 35789999999999999988863 8999999999988887443 34454 35566666655443667899999853
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++..+|.++.++|||||+|++..+
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2567899999999999999998743
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.94 E-value=1.2e-09 Score=109.28 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=75.4
Q ss_pred CCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC-CCCCCCceeEEEEcC
Q 003776 390 TRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFPGIVFDAVHCAR 461 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~-LPfpd~SFDlVvss~ 461 (796)
+.+|||||||+|.++..|+.+ .|+++|+++.++..++..+. ..++ .+.+...+... +|..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 679999999999999999864 79999999999988874443 3444 25666676533 455556 99999874
Q ss_pred CCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. ..+...+|.++.++|||||+|++...
T Consensus 135 ~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 34678999999999999999998643
No 174
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.94 E-value=3.4e-09 Score=107.39 Aligned_cols=111 Identities=18% Similarity=0.260 Sum_probs=78.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh----------CCeEEEeCChhhHHHHHHHHHHHc-----CCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD----------RGVLTMSFAPKDEHEAQVQFALER-----GIP 436 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~----------~~V~gvDiSp~dl~~A~~q~A~er-----gl~ 436 (796)
.+...+.+.+.. ...++.+|||||||+|.++..|++ ..|+++|+++.++..++....... ...
T Consensus 69 ~~~~~~~~~l~~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 69 HMHAFALEYLRD--HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp HHHHHHHHHTTT--TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHh--hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 334445555431 113577999999999999988876 279999999999988875544321 124
Q ss_pred eEEEEcCCCCCCCCC-CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 437 AISAVMGTERLPFPG-IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 437 ~~~~v~d~e~LPfpd-~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+.+...+... +++. ++||+|++... +++ ++.++.++|||||+|++...
T Consensus 147 v~~~~~d~~~-~~~~~~~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 147 LLIVEGDGRK-GYPPNAPYNAIHVGAA-APD------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEESCGGG-CCGGGCSEEEEEECSC-BSS------CCHHHHHTEEEEEEEEEEES
T ss_pred eEEEECCccc-CCCcCCCccEEEECCc-hHH------HHHHHHHHhcCCCEEEEEEe
Confidence 5666666544 4554 78999999864 433 23789999999999998754
No 175
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.94 E-value=7.1e-10 Score=117.66 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=71.1
Q ss_pred CCCEEEEECCCC--chhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC----CC--CCcee
Q 003776 389 RTRVVLDVGCGV--ASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP----FP--GIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGt--G~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP----fp--d~SFD 455 (796)
..++|||||||+ +.+...+++ .+|+++|.|+.|+..++..+.......+.+...|...++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 468999999997 333333332 489999999999988874443211113567778876642 11 34565
Q ss_pred -----EEEEcCCCcccccc---hHHHHHHHHhhcCCCcEEEEEe
Q 003776 456 -----AVHCARCRVPWHIE---GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 456 -----lVvss~~~l~w~~d---~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+|+++. .+||..+ +..+|+++.++|+|||+|+++.
T Consensus 158 ~~~p~av~~~a-vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 158 LTRPVALTVIA-IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTSCCEEEEES-CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cCCcchHHhhh-hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 466654 4888775 4689999999999999999984
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.94 E-value=5.6e-09 Score=110.15 Aligned_cols=120 Identities=15% Similarity=0.084 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeC-ChhhHHHHHHHHH----HHcCC----
Q 003776 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSF-APKDEHEAQVQFA----LERGI---- 435 (796)
Q Consensus 368 ~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDi-Sp~dl~~A~~q~A----~ergl---- 435 (796)
.......+.+...... ..+.+|||||||+|.++..|+.. .|+++|+ ++.++..++.... ...++
T Consensus 62 ~~~~~l~~~l~~~~~~----~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~ 137 (281)
T 3bzb_A 62 SGARALADTLCWQPEL----IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVK 137 (281)
T ss_dssp CHHHHHHHHHHHCGGG----TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC---------
T ss_pred cHHHHHHHHHHhcchh----cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCC
Confidence 3344445555554332 24679999999999999988764 6999999 8999888874432 23333
Q ss_pred --CeEEEEcCCCC----CC--CCCCceeEEEEcCCCcccccchHHHHHHHHhhcC---C--CcEEEEEeC
Q 003776 436 --PAISAVMGTER----LP--FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLR---P--GGFFIWSAT 492 (796)
Q Consensus 436 --~~~~~v~d~e~----LP--fpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLK---P--GG~fv~s~~ 492 (796)
.+.+...+... ++ ++.++||+|+++.+ +++..+...+|..+.++|+ | ||.+++...
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 138 RASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp -CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred CCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 23334333211 11 03578999999764 4445578899999999999 9 998776533
No 177
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.93 E-value=2.8e-09 Score=116.63 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=70.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
+..+|||||||+|.++..|+++ .++++|+ +.++..++ +. ..+.+...|... |++. ||+|++... +
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~-l 277 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----PL-SGIEHVGGDMFA-SVPQ--GDAMILKAV-C 277 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CC-TTEEEEECCTTT-CCCC--EEEEEEESS-G
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----hc-CCCEEEeCCccc-CCCC--CCEEEEecc-c
Confidence 4689999999999999999875 4677798 76665443 11 235677777755 6664 999999874 5
Q ss_pred ccccchH--HHHHHHHhhcCCCcEEEEEe
Q 003776 465 PWHIEGG--KLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 465 ~w~~d~~--~~L~Ei~RVLKPGG~fv~s~ 491 (796)
|+..+.. .+|++++|+|||||+|++..
T Consensus 278 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 278 HNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5444555 99999999999999999874
No 178
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.93 E-value=3.1e-10 Score=110.25 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=69.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhCCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC---CCCceeEEEEcCCCc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF---PGIVFDAVHCARCRV 464 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf---pd~SFDlVvss~~~l 464 (796)
+++.+|||||||. | ++|+++.|+..++.+.. ..+.+.+.+...+|+ ++++||+|+|+.+ +
T Consensus 11 ~~g~~vL~~~~g~-----------v-~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~-l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S-PVEALKGLVDKLQALTG----NEGRVSVENIKQLLQSAHKESSFDIILSGLV-P 73 (176)
T ss_dssp CTTSEEEEEECTT-----------S-CHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGGCCCSSCEEEEEECCS-T
T ss_pred CCCCEEEEecCCc-----------e-eeeCCHHHHHHHHHhcc----cCcEEEEechhcCccccCCCCCEeEEEECCh-h
Confidence 4578999999996 2 27888777766653321 135777888888887 8899999999875 7
Q ss_pred ccc-cchHHHHHHHHhhcCCCcEEEEEe
Q 003776 465 PWH-IEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 465 ~w~-~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+|. .++..+|++++|+|||||+|++..
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 776 788999999999999999999863
No 179
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.92 E-value=3.7e-09 Score=103.77 Aligned_cols=94 Identities=18% Similarity=0.146 Sum_probs=65.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-------------CeEEEeCChhhHHHHHHHHHHHcCCCeEEE-EcCCCCCC-----
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-------------GVLTMSFAPKDEHEAQVQFALERGIPAISA-VMGTERLP----- 448 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-------------~V~gvDiSp~dl~~A~~q~A~ergl~~~~~-v~d~e~LP----- 448 (796)
.++.+|||||||+|.++..|+++ .|+++|+++... -..+.+. ..+...++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHH
Confidence 35789999999999999988753 499999998320 0123455 55544332
Q ss_pred ---CCCCceeEEEEcCC---Ccccccch-------HHHHHHHHhhcCCCcEEEEEeC
Q 003776 449 ---FPGIVFDAVHCARC---RVPWHIEG-------GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 449 ---fpd~SFDlVvss~~---~l~w~~d~-------~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+++++||+|+|..+ ..+|..+. ..+|.++.|+|||||.|++...
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 34568999999652 11222233 4789999999999999998744
No 180
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.92 E-value=9.5e-10 Score=113.22 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCchhHHHHhh----CCeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCC---CCC---CCceeE
Q 003776 389 RTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL---PFP---GIVFDA 456 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~----~~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~L---Pfp---d~SFDl 456 (796)
++.+|||+|||+|.++..|+. ..|+++|+++.++..|+. .+...++. +.+...+...+ +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKK-NVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHH-HHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 467999999999998888875 379999999999998874 44455654 66777776542 455 268999
Q ss_pred EEEcCCCcccc--------------cchHHHHHHHHhhcCCCcEEEEE
Q 003776 457 VHCARCRVPWH--------------IEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 457 Vvss~~~l~w~--------------~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
|+|+..+++.. .....++.+++|+|||||.|++.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99986433221 01124567899999999988754
No 181
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.92 E-value=3.9e-09 Score=116.70 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=82.0
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCC
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e 445 (796)
..|.+.|.+.... .++.+|||||||+|.++..++++ .|+++|.++ ++..|+ +.++..++. +.++..+.+
T Consensus 69 ~aY~~Ai~~~~~~----~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~-~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 69 DAYRLGILRNWAA----LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR-EVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHTTHHH----HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhCHHh----cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHH-HHHHHcCCCceEEEEeeeee
Confidence 4555556543322 13779999999999998877764 699999997 766665 566666664 567777788
Q ss_pred CCCCCCCceeEEEEcC--CCcccccchHHHHHHHHhhcCCCcEEEE
Q 003776 446 RLPFPGIVFDAVHCAR--CRVPWHIEGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 446 ~LPfpd~SFDlVvss~--~~l~w~~d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
.+.+| ..||+|+|-. ..+.+-..+..++....|.|||||.++.
T Consensus 143 ~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 143 TVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 88877 6799999832 1133333678899999999999999984
No 182
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=2.6e-09 Score=121.62 Aligned_cols=112 Identities=17% Similarity=0.233 Sum_probs=81.8
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER 446 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~ 446 (796)
.|.+.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++ ++..|+ +.+...++ .+.+...+...
T Consensus 145 ~~~~~il~~l~~----~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 145 TYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp HHHHHHHHTGGG----TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHHhhhh----cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhh
Confidence 344555555432 34679999999999999988875 799999998 876665 45555665 36777888887
Q ss_pred CCCCCCceeEEEEcCCCcccc-cchHHHHHHHHhhcCCCcEEEEE
Q 003776 447 LPFPGIVFDAVHCARCRVPWH-IEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~-~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
++++ +.||+|+|+....++. .+....|.++.++|||||+|++.
T Consensus 219 ~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 219 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7776 5899999975212222 23466778899999999999854
No 183
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.92 E-value=2.6e-09 Score=114.29 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=75.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHH-H---cCCCeEEEEcCCCCCCC--CCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL-E---RGIPAISAVMGTERLPF--PGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~-e---rgl~~~~~v~d~e~LPf--pd~SFDlVv 458 (796)
.+.+|||||||+|.++..|++. .|+++|+++.++..++..+.. . ....+.+...|...++. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 4689999999999999999865 799999999998888754422 1 12346677777655443 468999999
Q ss_pred EcCCCcccccch----HHHHHHHHhhcCCCcEEEEEeC
Q 003776 459 CARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 459 ss~~~l~w~~d~----~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+... .++.... ..+|.++.|+|||||+|++...
T Consensus 175 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 175 IDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9753 3332211 6889999999999999998744
No 184
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.91 E-value=1.2e-09 Score=112.66 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=72.9
Q ss_pred CCEEEEECCCCchhHHHHhh--------CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC---CCCCC-CceeEE
Q 003776 390 TRVVLDVGCGVASFGGFLFD--------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---LPFPG-IVFDAV 457 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~--------~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~---LPfpd-~SFDlV 457 (796)
+.+|||||||+|.++..|++ ..|+++|+++.++..|+ .....+.+...+... +++.. .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 57999999999999998865 37999999998876654 223346777787766 36544 379999
Q ss_pred EEcCCCcccccchHHHHHHHHh-hcCCCcEEEEEe
Q 003776 458 HCARCRVPWHIEGGKLLLELNR-VLRPGGFFIWSA 491 (796)
Q Consensus 458 vss~~~l~w~~d~~~~L~Ei~R-VLKPGG~fv~s~ 491 (796)
++... |.+...+|.++.| +|||||+|++..
T Consensus 157 ~~d~~----~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA----HANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS----CSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc----hHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 98652 3477889999998 999999999863
No 185
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.91 E-value=4.1e-09 Score=113.59 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=72.2
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHc-----------CCCeEEEEcCCCCC--CC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALER-----------GIPAISAVMGTERL--PF 449 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~er-----------gl~~~~~v~d~e~L--Pf 449 (796)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..|+....... ...+.+...+...+ ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 3578999999999999998875 369999999999988875554321 12466777777665 56
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
++++||+|++... ++..+|.++.++|||||+|++..+
T Consensus 184 ~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7788999999642 334589999999999999997643
No 186
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.91 E-value=2e-09 Score=109.31 Aligned_cols=98 Identities=11% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC-CCCC--CCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFP--GIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~-LPfp--d~SFDlVvs 459 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. ....++ .+.+...+... ++.. +++||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH-VKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH-HHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 4679999999999999988764 799999999998888744 344454 35666666544 3433 578999999
Q ss_pred cCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
... ..+...+|.++.++|||||+|++..
T Consensus 133 ~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 752 2367899999999999999999873
No 187
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.91 E-value=3.5e-09 Score=110.81 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCA 460 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss 460 (796)
.++.+|||+|||+|.++..|+.+ .|+++|+++.++..++. .+...++ .+.+...+...+ +++++||+|++.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES-NLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH-HHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH-HHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 35779999999999999888753 69999999999888874 4444454 355666666554 666789999985
Q ss_pred CCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 461 ~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. .++..+|.++.++|+|||+|++..+
T Consensus 189 ~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 V------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp C------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3 2566899999999999999998743
No 188
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.91 E-value=4.7e-09 Score=115.04 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=71.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~ 463 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++ + ...+.+...|... |+|.+ |+|++...
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~-~~~v~~~~~d~~~-~~p~~--D~v~~~~v- 270 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----A-FSGVEHLGGDMFD-GVPKG--DAIFIKWI- 270 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C-CTTEEEEECCTTT-CCCCC--SEEEEESC-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----h-cCCCEEEecCCCC-CCCCC--CEEEEech-
Confidence 34689999999999999999874 6889998 66654432 1 1346677777655 77754 99999875
Q ss_pred cccccc--hHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 464 VPWHIE--GGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 464 l~w~~d--~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+|+..+ ...+|++++++|||||+|++......
T Consensus 271 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 271 CHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp GGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 443333 35889999999999999998765443
No 189
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.90 E-value=3.8e-09 Score=111.29 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=69.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CeEEEeCChhhHHHHHHHH--HHHcCCCeEEE--EcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQF--ALERGIPAISA--VMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-~V~gvDiSp~dl~~A~~q~--A~ergl~~~~~--v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||||||+|.++..|+++ .|+|+|+++ |+..++... +...+..+.+. ..|+..+| +++||+|+|..+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~ 149 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG 149 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc
Confidence 35789999999999999999885 899999998 532211000 00011134566 66777766 679999999753
Q ss_pred Cc--ccccchH---HHHHHHHhhcCCCc--EEEEEeC
Q 003776 463 RV--PWHIEGG---KLLLELNRVLRPGG--FFIWSAT 492 (796)
Q Consensus 463 ~l--~w~~d~~---~~L~Ei~RVLKPGG--~fv~s~~ 492 (796)
.+ ++..+.. .+|.++.|+||||| .|++...
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 11 1111222 37899999999999 9998743
No 190
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.89 E-value=3.1e-09 Score=106.98 Aligned_cols=100 Identities=15% Similarity=0.055 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCC-CC-CC---CCceeE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP-FP---GIVFDA 456 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~-LP-fp---d~SFDl 456 (796)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++. +.+...+... ++ ++ .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN-IERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4679999999999999999875 699999999999888744 4445553 5666776532 22 11 257999
Q ss_pred EEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 457 Vvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
|++... ......+|.++.++|||||+|++....
T Consensus 137 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998652 335678999999999999999987443
No 191
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.89 E-value=3.5e-09 Score=112.23 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=69.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CeEEEeCChhhHHHHHHHHH--HHcCCCeEEE--EcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFA--LERGIPAISA--VMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-~V~gvDiSp~dl~~A~~q~A--~ergl~~~~~--v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||||||+|.++..|+++ .|+|+|+++ |+..++.... ...+..+.+. ..|+..+| +++||+|+|..+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG 157 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC
Confidence 35789999999999999999885 899999998 6322210000 0001134566 66777766 679999999763
Q ss_pred Ccccc----cchH---HHHHHHHhhcCCCc--EEEEEeC
Q 003776 463 RVPWH----IEGG---KLLLELNRVLRPGG--FFIWSAT 492 (796)
Q Consensus 463 ~l~w~----~d~~---~~L~Ei~RVLKPGG--~fv~s~~ 492 (796)
+.. .+.. .+|.++.|+||||| .|++...
T Consensus 158 --~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 158 --ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp --CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred --cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 221 1222 37899999999999 9998643
No 192
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.88 E-value=3.4e-09 Score=106.91 Aligned_cols=97 Identities=14% Similarity=0.025 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC---------CeEEEeCChhhHHHHHHHHHHHc-----CCCeEEEEcCCCCCC----CC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---------GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTERLP----FP 450 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---------~V~gvDiSp~dl~~A~~q~A~er-----gl~~~~~v~d~e~LP----fp 450 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++....... ...+.+...+....+ +.
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 5789999999999999888752 69999999999988875544332 124667777766554 55
Q ss_pred CCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 451 GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 451 d~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++||+|++... +++ ++.++.++|||||+|++...
T Consensus 160 ~~~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGAS-ASE------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSB-BSS------CCHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCc-hHH------HHHHHHHhcCCCcEEEEEEc
Confidence 678999999763 332 35889999999999998743
No 193
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.88 E-value=5.7e-09 Score=109.83 Aligned_cols=99 Identities=18% Similarity=0.139 Sum_probs=79.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.++.+|||+|||+|.++..|+.+ .|+++|+++.++..++ +.+...++ .+.+..+++..++. .+.||+|++...
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~-~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLC-ENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHH-HHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 35789999999999999999864 7999999999998887 45555665 35677777766654 578999999863
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
. +...++.++.++|||||+++++...
T Consensus 196 ~-----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 196 H-----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred c-----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 1 5678999999999999999987543
No 194
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.88 E-value=3.2e-09 Score=114.60 Aligned_cols=102 Identities=13% Similarity=-0.032 Sum_probs=71.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH----cCCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE----RGIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e----rgl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..|+++ .|+++|+++.++..|+..+... ....+.+...|... ++...++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4679999999999999999864 7999999999988877443221 12345666666533 3445678999999
Q ss_pred cCCCcccccch----HHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~d~----~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
... .++.... ..+|.++.++|||||+|++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 652 2322211 688999999999999999874
No 195
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.88 E-value=7.4e-09 Score=109.34 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=76.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c---CCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r---gl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..++++ .|+++|+++.++..++..+..- . ...+.+...|... ++...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999999875 6999999999998887554321 1 2346677777533 4444678999999
Q ss_pred cCCCccccc----chHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~----d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
... .++.. ....++.++.|+|||||+|++..
T Consensus 155 d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 753 23221 13689999999999999999874
No 196
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.88 E-value=5.2e-09 Score=112.27 Aligned_cols=102 Identities=12% Similarity=0.020 Sum_probs=74.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c---CCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r---gl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..|+++ .|+++|+++.++..++..+..- . ...+.+...|... ++...++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999999875 6999999999998887554331 1 2346667777533 4455688999999
Q ss_pred cCCCccccc----chHHHHHHHHhhcCCCcEEEEEe
Q 003776 460 ARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 460 s~~~l~w~~----d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
... .++.. ....+|.++.|+|||||+|++..
T Consensus 175 d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 652 33221 22578999999999999999874
No 197
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.87 E-value=7.5e-09 Score=111.33 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=77.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCCCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPfpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|..+..|+.. .|+++|+++.++..++. .+...|+ .+.+...|...++...++||+|++..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRL-NLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-HHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 35789999999999999988852 69999999999988874 4444565 45666677777665567899999842
Q ss_pred -----CCcccccc----------------hHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 462 -----CRVPWHIE----------------GGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 462 -----~~l~w~~d----------------~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
..++.+++ ...+|.++.++|||||+|++++...
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 11221111 1488999999999999999986543
No 198
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.87 E-value=1.5e-09 Score=112.40 Aligned_cols=99 Identities=13% Similarity=-0.004 Sum_probs=76.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC-CCCC-----CCcee
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFP-----GIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~-LPfp-----d~SFD 455 (796)
++.+|||||||+|..+..|+.. .|+++|+++.++..++ +.+...++ .+.+..+++.. ++.. .++||
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~-~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAH-PYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSH-HHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3679999999999999999863 7999999999988887 44445555 36677777533 3321 47899
Q ss_pred EEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 456 lVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+|++.. +..+...+|.++.++|||||+|++...
T Consensus 139 ~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDA----DKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEES----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcC----ChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 999864 244667899999999999999998744
No 199
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.86 E-value=9.9e-09 Score=112.39 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=72.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~ 463 (796)
.+..+|||||||+|.++..|+++ .++++|+ +.++..++ . ...+.+...|... |+|.+ |+|++..+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~-~~~v~~~~~D~~~-~~p~~--D~v~~~~v- 268 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----Q-FPGVTHVGGDMFK-EVPSG--DTILMKWI- 268 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C-CTTEEEEECCTTT-CCCCC--SEEEEESC-
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----h-cCCeEEEeCCcCC-CCCCC--CEEEehHH-
Confidence 35689999999999999999863 6889999 65654432 1 2346777788766 77754 99999875
Q ss_pred cc-ccc-chHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 464 VP-WHI-EGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 464 l~-w~~-d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+| |.. +...+|++++++|||||+|++......
T Consensus 269 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 269 LHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 44 332 346899999999999999998765443
No 200
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=3e-09 Score=115.10 Aligned_cols=102 Identities=13% Similarity=0.168 Sum_probs=75.0
Q ss_pred CCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCC--CCCCCceeEEEEcCCC
Q 003776 390 TRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL--PFPGIVFDAVHCARCR 463 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~L--Pfpd~SFDlVvss~~~ 463 (796)
..+|||||||+|.++..|+++ .|+++|+++.++..++..+.......+.+++.|...+ .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 349999999999999999872 6899999999887776444321123466777775332 345689999999642
Q ss_pred ccc----ccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPW----HIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w----~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.++ +.....+|.+++|+|||||+|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 222 22237899999999999999998743
No 201
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.86 E-value=3.8e-09 Score=109.58 Aligned_cols=98 Identities=9% Similarity=-0.041 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCC-CCC------CCCce
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPF------PGIVF 454 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~-LPf------pd~SF 454 (796)
++.+|||||||+|..+..|+.. .|+++|+++.++..++.. ....++ .+.+...+... +|. +.++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPV-IKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3679999999999999988753 799999999999888744 444565 35666666533 332 25789
Q ss_pred eEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 455 DlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
|+|++... ..+...+|.++.++|||||+|++..
T Consensus 158 D~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998642 3467899999999999999999874
No 202
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.85 E-value=9.4e-09 Score=109.04 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC
Q 003776 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT 444 (796)
Q Consensus 370 a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~ 444 (796)
....++.+.+.++. .++.+|||+|||+|.++..|+.. .|+++|+++.++..++ +.+...++. +.+...+.
T Consensus 108 te~lv~~~l~~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~-~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 108 TEELVELALELIRK----YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIAR-KNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp HHHHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHH-HHHHHTTCTTSEEEEESST
T ss_pred HHHHHHHHHHHhcc----cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECcc
Confidence 34445555554432 13579999999999999988754 7999999999998887 455556664 66777776
Q ss_pred CCCCCCCCce---eEEEEcCCCccc---------cc---------chHHHHHHHH-hhcCCCcEEEEE
Q 003776 445 ERLPFPGIVF---DAVHCARCRVPW---------HI---------EGGKLLLELN-RVLRPGGFFIWS 490 (796)
Q Consensus 445 e~LPfpd~SF---DlVvss~~~l~w---------~~---------d~~~~L~Ei~-RVLKPGG~fv~s 490 (796)
.. +++ ++| |+|+++..++.. |. +...+++++. +.|+|||+|++.
T Consensus 183 ~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 183 LE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 44 233 578 999998432221 11 1237899999 999999999986
No 203
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.85 E-value=6e-09 Score=104.10 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCC-----------CCce
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP-----------GIVF 454 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfp-----------d~SF 454 (796)
.++.+|||||||+|.++..|+++ .|+|+|+++.. ....+.+...|....+.. .++|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 35789999999999999999875 79999999842 112356777777665421 1489
Q ss_pred eEEEEcCCCcc----cccc-------hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 455 DAVHCARCRVP----WHIE-------GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 455 DlVvss~~~l~----w~~d-------~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|+|+|... .. +..+ ...+|..+.++|||||.|++...
T Consensus 93 D~Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 93 DDVVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp EEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 99999642 11 1112 14678889999999999997643
No 204
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.84 E-value=6.3e-09 Score=113.01 Aligned_cols=103 Identities=12% Similarity=-0.025 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC---eEEEEcCCCCCC-C---CCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTERLP-F---PGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~v~d~e~LP-f---pd~SFDlVvs 459 (796)
++.+|||+|||+|.++..++.+ .|+++|+++.++..++.. +...++. +.+...|+..+. . ..++||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n-~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKEN-QVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4679999999999999999875 799999999999888744 4444553 566667654432 1 1468999999
Q ss_pred cCCCcc---------cccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVP---------WHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~---------w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
....+. +..+...+|.++.++|||||+|++...
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 643211 112457889999999999999877643
No 205
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.83 E-value=5.8e-09 Score=112.76 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=75.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c---CCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r---gl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..++++ .|+++|+++.++..++..+..- . ...+.+...|... ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4679999999999999999865 6999999999988777443220 1 2345666776533 3334578999999
Q ss_pred cCCCccccc--ch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVPWHI--EG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~w~~--d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
... .++.. .. ..++.++.++|||||+|++...
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 752 23322 11 6899999999999999998754
No 206
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.82 E-value=1e-08 Score=109.43 Aligned_cols=103 Identities=12% Similarity=-0.001 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c---CCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r---gl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..++++ .|+++|+++.++..++..+..- . ...+.+...|... ++...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999999875 6999999999998887554321 1 2346667776533 4445678999998
Q ss_pred cCCCccccc-----chHHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVPWHI-----EGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~w~~-----d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
... .+|.. ....++.++.++|||||+|++...
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 642 22111 236889999999999999998743
No 207
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.82 E-value=4.6e-09 Score=112.83 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=66.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CeEEEeC----ChhhHHHHHHHHHHHcCCC-eEEEEc-CCCCCCCCCCceeEEEEc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSF----APKDEHEAQVQFALERGIP-AISAVM-GTERLPFPGIVFDAVHCA 460 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-~V~gvDi----Sp~dl~~A~~q~A~ergl~-~~~~v~-d~e~LPfpd~SFDlVvss 460 (796)
.++.+|||||||+|.++..|+++ .|+++|+ ++.++.... +...+.+ +.+... +...+| ..+||+|+|.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 35789999999999999999886 7999999 453331110 0111223 344444 555554 5689999997
Q ss_pred CCC--cccccchH---HHHHHHHhhcCCCcEEEEEeC
Q 003776 461 RCR--VPWHIEGG---KLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 461 ~~~--l~w~~d~~---~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
.+. .++..+.. .+|.++.|+|||||.|++...
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 532 12222332 578999999999999998643
No 208
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.81 E-value=2.3e-08 Score=111.15 Aligned_cols=108 Identities=19% Similarity=0.005 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC-CCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER-LPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~-LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++...+...|+.. ++...+.||+|++....+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~-~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLD-QAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHH-HHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 4789999999999999999874 6999999999999887 4455566665566666533 2222344999999753222
Q ss_pred cc--------cchHHHHHHHHhhcCCCcEEEEEeCCCCCC
Q 003776 466 WH--------IEGGKLLLELNRVLRPGGFFIWSATPVYQK 497 (796)
Q Consensus 466 w~--------~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~ 497 (796)
.. .+...++..+.++|||||+|+++.......
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~ 332 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR 332 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 11 133578889999999999999775544433
No 209
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.81 E-value=7.4e-09 Score=112.29 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
+..+|||||||+|.++..|+++ .++++|+ +.++..++ +. ..+.+...|... +++. ||+|++... +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~-l 256 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS-----GS-NNLTYVGGDMFT-SIPN--ADAVLLKYI-L 256 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CB-TTEEEEECCTTT-CCCC--CSEEEEESC-G
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc-----cC-CCcEEEeccccC-CCCC--ccEEEeehh-h
Confidence 4689999999999999999864 6999999 87765543 11 235667777644 5653 999999875 5
Q ss_pred ccccchH--HHHHHHHhhcCC---CcEEEEEeCCC
Q 003776 465 PWHIEGG--KLLLELNRVLRP---GGFFIWSATPV 494 (796)
Q Consensus 465 ~w~~d~~--~~L~Ei~RVLKP---GG~fv~s~~~~ 494 (796)
|...+.. .+|++++|+||| ||+|++.....
T Consensus 257 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 5444555 999999999999 99999875543
No 210
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.81 E-value=7.3e-09 Score=109.75 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH----cCCCeEEEEcCCCC-CCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE----RGIPAISAVMGTER-LPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e----rgl~~~~~v~d~e~-LPfpd~SFDlVvs 459 (796)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... ....+.+...|... ++...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4689999999999999999864 7999999999887776443211 02345666776533 3333578999999
Q ss_pred cCCCccccc--ch--HHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVPWHI--EG--GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~w~~--d~--~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
... .++.. .. ..++..+.++|||||+|++...
T Consensus 158 d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 642 33332 12 6899999999999999998743
No 211
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.81 E-value=6e-09 Score=112.11 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=77.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHH-Hc----CCCeEEEEcCCCC-CCCCCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL-ER----GIPAISAVMGTER-LPFPGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~-er----gl~~~~~v~d~e~-LPfpd~SFDlVv 458 (796)
.+.+|||||||+|.++..|+++ +|+++|+++.++..++..+.. .. ...+.+...|... ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4689999999999999999875 699999999999888755433 12 2346677777543 444568899999
Q ss_pred EcCCCccc---cc----chHHHHHHHHhhcCCCcEEEEEe
Q 003776 459 CARCRVPW---HI----EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 459 ss~~~l~w---~~----d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+... .++ .. ....++.++.|+|||||+|++..
T Consensus 157 ~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9753 444 21 13689999999999999999864
No 212
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.80 E-value=8.1e-09 Score=105.57 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=74.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCC-CC------------
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP------------ 448 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~-LP------------ 448 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++..+ ...++. +.+...+... ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW-KENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4679999999999999988753 7999999999988887443 444543 4566665422 22
Q ss_pred --CCC--CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 449 --FPG--IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 449 --fpd--~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
|++ ++||+|++... ..+...+|.++.++|||||+|++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999998752 3356789999999999999999874
No 213
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.80 E-value=9.4e-09 Score=109.05 Aligned_cols=109 Identities=22% Similarity=0.223 Sum_probs=76.7
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL 447 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~L 447 (796)
..++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...+. .+.+...|+..+
T Consensus 15 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 15 LIINSIIDKAAL----RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHTCC----CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcceecc
Confidence 455666666653 35789999999999999999874 8999999999988776433 22232 356777888777
Q ss_pred CCCCCceeEEEEcCCCcccccch-HHHH--------------HHH--HhhcCCCcEEE
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEG-GKLL--------------LEL--NRVLRPGGFFI 488 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~-~~~L--------------~Ei--~RVLKPGG~fv 488 (796)
+++ +||+|+++.. ++|.... ..+| +|+ +++|+|||.++
T Consensus 90 ~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 776 7999999763 4443222 1222 233 47999999875
No 214
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.79 E-value=9.9e-09 Score=104.97 Aligned_cols=98 Identities=14% Similarity=0.119 Sum_probs=75.1
Q ss_pred CCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC----CCCCCCC--CceeE
Q 003776 390 TRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT----ERLPFPG--IVFDA 456 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~----e~LPfpd--~SFDl 456 (796)
+.+|||||||+|.++..|+.. .|+++|+++.++..++..+. ..++. +.+...+. ..+++.+ ++||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ-KAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 679999999999999999864 69999999999888874443 44542 55666664 2344444 78999
Q ss_pred EEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 457 Vvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|++... ..+...+|.++.++|||||+|++...
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 998642 34667899999999999999998743
No 215
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.79 E-value=2.5e-08 Score=112.44 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=79.3
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCC--CCCCceeEEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP--FPGIVFDAVHC 459 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LP--fpd~SFDlVvs 459 (796)
.++.+|||+|||+|..+..|+. ..|+++|+++.++..++ +.+...|+ .+.+...|...++ +++++||+|++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLK-DFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHH-HHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 3578999999999999998876 36999999999888776 44455566 4566667777666 66678999997
Q ss_pred c-----CCCcccccch----------------HHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 460 A-----RCRVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 460 s-----~~~l~w~~d~----------------~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
. ...++.+++. ..+|.++.++|||||+|++++...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 2 2222222222 468999999999999999886544
No 216
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.78 E-value=1.3e-08 Score=107.01 Aligned_cols=107 Identities=12% Similarity=0.161 Sum_probs=78.6
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCCC----CCCceeEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPF----PGIVFDAV 457 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LPf----pd~SFDlV 457 (796)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..++ +.+...|+ .+.+...|...++. ..+.||+|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALK-SNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHH-HHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 3578999999999999988875 37999999999988776 44555666 45666677655543 25789999
Q ss_pred EEcC-CC----cc----c--------ccchHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 458 HCAR-CR----VP----W--------HIEGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 458 vss~-~~----l~----w--------~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
++.. |. +. | ......+|.++.++|||||+|++++....
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 9862 10 11 0 12346889999999999999999865443
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.78 E-value=1.2e-08 Score=108.05 Aligned_cols=100 Identities=12% Similarity=0.059 Sum_probs=73.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHH-----------cCCCeEEEEcCCCC-CCCCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALE-----------RGIPAISAVMGTER-LPFPGIV 453 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~e-----------rgl~~~~~v~d~e~-LPfpd~S 453 (796)
.+.+|||||||+|.++..++++ +|+++|+++.++..++..+ .. ....+.+...|... ++. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4689999999999999999875 7999999999988887544 11 12235666666432 333 578
Q ss_pred eeEEEEcCCCccccc--c--hHHHHHHHHhhcCCCcEEEEEe
Q 003776 454 FDAVHCARCRVPWHI--E--GGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 454 FDlVvss~~~l~w~~--d--~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
||+|++... .++.. . ...++.++.++|+|||+|++..
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999753 23322 1 3678999999999999999864
No 218
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.78 E-value=3.3e-09 Score=122.93 Aligned_cols=101 Identities=21% Similarity=0.150 Sum_probs=78.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcC-CCeEEEEcCCCCC--CCCCCceeEEEEcCCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERL--PFPGIVFDAVHCARCR 463 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~erg-l~~~~~v~d~e~L--Pfpd~SFDlVvss~~~ 463 (796)
++.+|||||||.|.++..|+++ .|+|+|+++.++..|+ ..|.+.+ +.+.+.+.++++| ++.+++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-- 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR-ALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS-- 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES--
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc--
Confidence 4679999999999999999986 8999999999999987 5555555 6778888888777 56788999999987
Q ss_pred ccccc-chH--HHHHHHHhhcCCCcEEEEEeC
Q 003776 464 VPWHI-EGG--KLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 464 l~w~~-d~~--~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+..|. ++. ..+..+.+.|+++|..++...
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEe
Confidence 44454 553 335567788888886655433
No 219
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.77 E-value=3.8e-08 Score=108.04 Aligned_cols=100 Identities=11% Similarity=-0.034 Sum_probs=76.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCC-CCC-CCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTER-LPF-PGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~-LPf-pd~SFDlVvss~ 461 (796)
++.+|||+| |+|.++..|+.. .|+++|+++.++..++ +.+...|+ .+.+...|... +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~-~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIE-KAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHH-HHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 468999999 999999888753 7999999999998887 44455566 56777788766 774 457899999986
Q ss_pred CCcccccchHHHHHHHHhhcCCCc-EEEEEeC
Q 003776 462 CRVPWHIEGGKLLLELNRVLRPGG-FFIWSAT 492 (796)
Q Consensus 462 ~~l~w~~d~~~~L~Ei~RVLKPGG-~fv~s~~ 492 (796)
. ++.. ....+|.++.++||||| .++++..
T Consensus 250 p-~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 P-ETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp C-SSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred C-CchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 3 2211 35788999999999999 4466643
No 220
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.77 E-value=4.2e-08 Score=108.42 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=77.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC---CeEEEEcCCCC-CCC---CCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMGTER-LPF---PGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl---~~~~~v~d~e~-LPf---pd~SFDlVv 458 (796)
++.+|||+|||+|.++..++.+ .|+++|+++.++..|+ +.+...++ .+.+...|+.. ++. ...+||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~-~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSL-AHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHH-HHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 3679999999999999999873 6999999999999887 55555666 46677777533 331 245899999
Q ss_pred EcCCCc----cccc----chHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 459 CARCRV----PWHI----EGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 459 ss~~~l----~w~~----d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+..... .... +...++..+.++|+|||+|+++..+..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 965332 1122 234577888999999999999865433
No 221
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.76 E-value=2.3e-08 Score=109.99 Aligned_cols=100 Identities=19% Similarity=-0.011 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
++.+|||+|||+|.++..++.. .|+|+|+++.++..|+ +.+...|+ .+.+.+.|...+|+++++||+|+++..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~-~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE-MNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH-HHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 5789999999999999988864 7999999999999887 55556676 568888999889988899999999753
Q ss_pred Ccccc------cch-HHHHHHHHhhcCCCcEEEEE
Q 003776 463 RVPWH------IEG-GKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 463 ~l~w~------~d~-~~~L~Ei~RVLKPGG~fv~s 490 (796)
+-... .+. ..++.++.|+| +|+.++++
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 11100 011 57788999999 44444443
No 222
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.76 E-value=1.5e-08 Score=102.13 Aligned_cols=99 Identities=13% Similarity=0.022 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCC-C-CC----CCcee
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL-P-FP----GIVFD 455 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~L-P-fp----d~SFD 455 (796)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. ....++ .+.+...+.... + ++ .++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPL-WRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 3679999999999999999863 799999999998888744 444554 356666664221 1 11 16899
Q ss_pred EEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 456 lVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+|++... ..+...+|.++.++|||||++++...
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999652 33567899999999999999998743
No 223
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.76 E-value=1.3e-08 Score=104.57 Aligned_cols=99 Identities=11% Similarity=0.012 Sum_probs=75.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCC-CC-C-----CCCce
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP-F-----PGIVF 454 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~-LP-f-----pd~SF 454 (796)
+..+|||||||+|..+..|+.+ .|+++|+++.++..++.. ....++. +.+...+... ++ + +.++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPF-IRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3679999999999999888753 799999999998888744 4445653 5666666532 22 1 25789
Q ss_pred eEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 455 DlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|+|++.. +..+...+|.++.++|||||++++...
T Consensus 149 D~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999864 344668899999999999999998743
No 224
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=1.8e-08 Score=109.56 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=71.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
...+|||||||+|.++..|+++ .++++|+ +.++..++ + ...+.+...|... |++ .||+|++... +
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~-~~~v~~~~~d~~~-~~~--~~D~v~~~~v-l 261 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT-----G-NENLNFVGGDMFK-SIP--SADAVLLKWV-L 261 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC-----C-CSSEEEEECCTTT-CCC--CCSEEEEESC-G
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc-----c-CCCcEEEeCccCC-CCC--CceEEEEccc-c
Confidence 4679999999999999999874 5788898 65654432 1 1235666777655 666 4999999874 5
Q ss_pred ccccchH--HHHHHHHhhcCC---CcEEEEEeCC
Q 003776 465 PWHIEGG--KLLLELNRVLRP---GGFFIWSATP 493 (796)
Q Consensus 465 ~w~~d~~--~~L~Ei~RVLKP---GG~fv~s~~~ 493 (796)
|+..+.. .+|++++++||| ||+|++....
T Consensus 262 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 5555655 999999999999 9999987543
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.73 E-value=3e-08 Score=110.92 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC--CCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--FPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP--fpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|..+..|+.. .|+++|+++.++..++ +.+...|+.+.+...|...++ ++.++||+|++..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~-~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY-DNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45789999999999999988863 7999999999988877 445556777777788877766 6667899999732
Q ss_pred -----CCcccccch----------------HHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 462 -----CRVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 462 -----~~l~w~~d~----------------~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
..++.+++. ..+|.++.++|||||+|++++...
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 112222221 377999999999999999986544
No 226
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.73 E-value=6.2e-08 Score=105.63 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=72.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
...+|||||||+|.++..|+++ +++..|+ |..+..++...+....-.+.+...|....|++ .+|+|++... +
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v-l 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV-L 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS-G
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee-c
Confidence 4679999999999999999875 5677776 55665554332221122356667776555555 4799999875 4
Q ss_pred ccccch--HHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 465 PWHIEG--GKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 465 ~w~~d~--~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
|...|. ..+|++++++|+|||++++......
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 433443 5789999999999999998765443
No 227
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.71 E-value=6.1e-08 Score=107.20 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC---CeEEEEcCCCCC-C-C--CCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMGTERL-P-F--PGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl---~~~~~v~d~e~L-P-f--pd~SFDlVv 458 (796)
++.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++ .+.+...|...+ + + ....||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~-~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIAR-QNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 3679999999999999999875 6999999999998887 45555676 466777775443 2 1 146899999
Q ss_pred EcCCCccc--------ccchHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 459 CARCRVPW--------HIEGGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 459 ss~~~l~w--------~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
+....... ......++.++.++|+|||+|+++..+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 97532111 12456889999999999999999865443
No 228
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.71 E-value=3.7e-08 Score=108.88 Aligned_cols=105 Identities=17% Similarity=0.055 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCC-CC---CCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL-PF---PGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~L-Pf---pd~SFDlVvs 459 (796)
++.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++ .+.+...+...+ +. ...+||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~-~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAK-ENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4789999999999999999875 6999999999998887 44555666 466777775443 21 2568999999
Q ss_pred cCCCcccc--------cchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 460 ARCRVPWH--------IEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 460 s~~~l~w~--------~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
........ .+...++.++.++|+|||+|+++....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 65322111 234678899999999999999875543
No 229
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.70 E-value=1.6e-08 Score=114.73 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=78.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC-CCCCceeEEEEcC
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-FPGIVFDAVHCAR 461 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP-fpd~SFDlVvss~ 461 (796)
.++.+|||+|||+|..+..|+.+ .|+++|+++.++..++ +.+...|+.+.+...|...++ +..++||+|++..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~-~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLL-ENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 35789999999999999988853 6999999999988887 455556766566666665554 3457899999621
Q ss_pred -----CCcccccch----------------HHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 462 -----CRVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 462 -----~~l~w~~d~----------------~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
..+..+++. ..+|.++.++|||||+|++++....
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 111111111 5788999999999999999865443
No 230
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.70 E-value=5.6e-08 Score=96.23 Aligned_cols=90 Identities=11% Similarity=0.027 Sum_probs=66.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||+|||+|.++..|+.. .|+++|+++.++..++.... .+.+...+...+| ++||+|+++.. ++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p-~~ 121 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPP-FG 121 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCC-C-
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCC-ch
Confidence 4679999999999999999875 59999999988877763322 4577788877765 68999999875 33
Q ss_pred ccc--chHHHHHHHHhhcCCCcEEEE
Q 003776 466 WHI--EGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 466 w~~--d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
+.. ....++.++.++| |+.+++
T Consensus 122 ~~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp ------CHHHHHHHHHHE--EEEEEE
T ss_pred hccCchhHHHHHHHHHhc--CcEEEE
Confidence 332 2357899999999 554443
No 231
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.69 E-value=1.2e-07 Score=94.15 Aligned_cols=96 Identities=11% Similarity=-0.041 Sum_probs=71.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
++.+|||+|||+|.++..|+.. .|+++|+++.++..++.. +...++.+.+...+...+| .+||+|+++..+..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN-LGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-TGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 4779999999999999999875 599999999998877633 3344556777788877765 48999999875322
Q ss_pred ccc-chHHHHHHHHhhcCCCcEEEEE
Q 003776 466 WHI-EGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 466 w~~-d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+.. ....+|.++.++| ||.+++.
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEE
Confidence 221 3357889999999 6655543
No 232
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.68 E-value=5.4e-08 Score=100.76 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=80.6
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~L 447 (796)
+..+.+.++ ++.+|||||||+|.++..|+.. .|+++|+++.++..|+ +.+...++. +.+...|....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~-~N~~~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSAL-KNVSEHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEECchhhc
Confidence 455666555 3689999999999999999875 6999999999998887 555566664 66777776554
Q ss_pred CCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..+...||+|+... +.- .-...+|.+..+.|+++|+|+++.
T Consensus 85 ~~~~~~~D~IviaG--mGg-~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 85 FEEADNIDTITICG--MGG-RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp CCGGGCCCEEEEEE--ECH-HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred cccccccCEEEEeC--Cch-HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 44444799987643 221 124577888899999999999984
No 233
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.68 E-value=2.7e-08 Score=109.55 Aligned_cols=105 Identities=18% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCC-CC---CCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERL-PF---PGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~L-Pf---pd~SFDlVvss~ 461 (796)
++.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++. +.+...++..+ +. ...+||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAE-ENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHH-HHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHH-HHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 3679999999999999999864 8999999999998887 445555654 66777775443 21 257899999965
Q ss_pred CCcccc--------cchHHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 462 CRVPWH--------IEGGKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 462 ~~l~w~--------~d~~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
..+... .....++.++.++|+|||+|+++....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 322211 134578899999999999999986543
No 234
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.67 E-value=3.8e-08 Score=103.46 Aligned_cols=94 Identities=18% Similarity=0.068 Sum_probs=71.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHH----HcCCCeEEEEcCCCCCCCCCCceeEEEEcCC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFAL----ERGIPAISAVMGTERLPFPGIVFDAVHCARC 462 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~----ergl~~~~~v~d~e~LPfpd~SFDlVvss~~ 462 (796)
.+.+|||||||+|.++..++++ .|+++|+++.++..|+..+.. -....+.+...|..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4679999999999999988764 799999999888777643211 11234566666665543 7899999964
Q ss_pred CcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 463 ~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.++..++..+.++|||||+|++..
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 245569999999999999999863
No 235
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.67 E-value=5.8e-08 Score=101.36 Aligned_cols=108 Identities=12% Similarity=0.002 Sum_probs=80.1
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~L 447 (796)
+..+.+.++ ++.+|||||||+|.++..|+.. .|+++|+++..+..|+ +.+...|+. +.+...|....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~I~v~~gD~l~~ 84 (244)
T 3gnl_A 12 LEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ-KQVRSSGLTEQIDVRKGNGLAV 84 (244)
T ss_dssp HHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEecchhhc
Confidence 455566555 3679999999999999999875 6999999999998887 555566764 56667765444
Q ss_pred CCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 448 Pfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..+...||+|+... +.- .-...+|.+..+.|+++|+|+++.
T Consensus 85 ~~~~~~~D~Iviag--mGg-~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 85 IEKKDAIDTIVIAG--MGG-TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp CCGGGCCCEEEEEE--ECH-HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred cCccccccEEEEeC--Cch-HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 44434699988653 221 124577888999999999999984
No 236
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.67 E-value=1.3e-07 Score=102.65 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
++.+|||+|||+|.++.. +.. .|+++|+++.++..++ +.+...++ .+.+...|...+. +.||+|++...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~-~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLK-KNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-- 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--
Confidence 478999999999999998 754 7999999999998887 45555665 3677777776655 78999999742
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 465 PWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 465 ~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
. ....++..+.++|+|||+|++...
T Consensus 268 ~---~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 268 K---FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp T---TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred H---hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1 134789999999999999987643
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.66 E-value=5.6e-08 Score=115.49 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC---eEEEEcCCCC-CCCCCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTER-LPFPGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~v~d~e~-LPfpd~SFDlVvss~ 461 (796)
++.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++. +.+...|... ++...++||+|++..
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~-~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE-RNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3679999999999999998864 5999999999999887 444556654 6777777643 455567899999975
Q ss_pred CCcc--------cc--cchHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 462 CRVP--------WH--IEGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 462 ~~l~--------w~--~d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
..+. +. .+...++..+.++|+|||+|+++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3221 11 14467899999999999999988654
No 238
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.63 E-value=1.8e-07 Score=96.59 Aligned_cols=107 Identities=14% Similarity=0.065 Sum_probs=78.9
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCC-CC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT-ER 446 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~-e~ 446 (796)
+..+.+.++ ++.+|||||||+|.++..|+.. .|+++|+++..+..|+ +.+...++. +.+...|. ..
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV-KNVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEECchhhh
Confidence 344555554 3679999999999999999875 6999999999998887 556667764 56666664 44
Q ss_pred CCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
++.. ..||+|+... +.- .-...+|.+....|+|+|+|+++.
T Consensus 79 l~~~-~~~D~IviaG--~Gg-~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 79 FEET-DQVSVITIAG--MGG-RLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp CCGG-GCCCEEEEEE--ECH-HHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred cccC-cCCCEEEEcC--CCh-HHHHHHHHHHHHHhCCCCEEEEEC
Confidence 4422 2699988754 221 124678888999999999999973
No 239
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.63 E-value=1.2e-07 Score=98.93 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=77.0
Q ss_pred CCCCEEEEECCCCchhHHHHhh-CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
..+.+|||||||+|.++..+.. ..|+++|+++.++..++ +++...+++..+.+.|....|++ ++||+|++... +|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar-~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~-lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVIT-PFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKL-LPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHH-HHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESC-HHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeecccCCCC-CCcchHHHHHH-HHH
Confidence 3578999999999999998774 48999999999998887 44556678888888888777766 48999999863 443
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEE
Q 003776 467 HI--EGGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 467 ~~--d~~~~L~Ei~RVLKPGG~fv~ 489 (796)
.. .....+ .+...|+|+|.|+-
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred hhhhchhhHH-HHHHHhcCCCEEEE
Confidence 32 334444 88899999998883
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.63 E-value=1e-07 Score=108.58 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCC-CCCceeEEEEcC
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPF-PGIVFDAVHCAR 461 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPf-pd~SFDlVvss~ 461 (796)
++.+|||+|||+|..+..|+.. .|+++|+++.++..++ +.+...|+. +.+...|...++. .+++||+|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~-~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLH-ANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHH-HHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 5789999999999999988763 6999999999998887 444455664 5566677776653 457899999831
Q ss_pred -C----Ccccccc----------------hHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 462 -C----RVPWHIE----------------GGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 462 -~----~l~w~~d----------------~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
| .+..+++ ...+|.++.++|||||+|++++....
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 1 1111111 13678999999999999999865443
No 241
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.61 E-value=1.8e-07 Score=98.49 Aligned_cols=97 Identities=10% Similarity=0.087 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l 464 (796)
...+|||||||+|-++..++.. .|+++|+++.++..++ .++...|+...+.+.|...-+ +...||+|+++.. +
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~-~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkt-i 208 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD-EALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKT-L 208 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH-HHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTC-H
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeeecccC-CCCCcchHHHHHH-H
Confidence 3779999999999999888654 8999999999998887 555566888777777764433 4578999999873 4
Q ss_pred ccccch--HHHHHHHHhhcCCCcEEEE
Q 003776 465 PWHIEG--GKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 465 ~w~~d~--~~~L~Ei~RVLKPGG~fv~ 489 (796)
|...+. ...+ ++...|+|+|.|+-
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 433222 3444 99999999999984
No 242
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.60 E-value=1.7e-07 Score=101.44 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=74.9
Q ss_pred CCCEEEEECCCCchhHHHHhh---------CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFD---------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHC 459 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~---------~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvs 459 (796)
.+.+|||+|||+|.++..+++ ..++|+|+++.++..|+.... ..++.+.+...+... +.+...||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCC-ccccCCccEEEE
Confidence 467999999999999887753 358999999999888875444 446666777777544 334578999999
Q ss_pred cCCCcccccc-----------------h-HHHHHHHHhhcCCCcEEEEEeC
Q 003776 460 ARCRVPWHIE-----------------G-GKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 460 s~~~l~w~~d-----------------~-~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+.. +.+... . ..+|..+.+.|||||++++..+
T Consensus 208 NPP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 864 222111 1 2578999999999999998754
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.58 E-value=1.3e-07 Score=100.89 Aligned_cols=84 Identities=20% Similarity=0.243 Sum_probs=59.9
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCC-CeEEEEcCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP 448 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl-~~~~~v~d~e~LP 448 (796)
..++.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.... ..+. .+.+...|...++
T Consensus 29 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAAKI----KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----CCSSC
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECchhhCC
Confidence 345555555442 35789999999999999999875 79999999999988874443 3444 3566677777777
Q ss_pred CCCCceeEEEEcCC
Q 003776 449 FPGIVFDAVHCARC 462 (796)
Q Consensus 449 fpd~SFDlVvss~~ 462 (796)
++ +||+|+++..
T Consensus 104 ~~--~~D~Vv~n~p 115 (299)
T 2h1r_A 104 FP--KFDVCTANIP 115 (299)
T ss_dssp CC--CCSEEEEECC
T ss_pred cc--cCCEEEEcCC
Confidence 64 7999999753
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.56 E-value=2.5e-07 Score=103.82 Aligned_cols=96 Identities=22% Similarity=0.190 Sum_probs=72.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCccc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w 466 (796)
++.+|||+|||+|.++..|++. .|+++|+++.++..|+ +.+...++.+.+...++..++.. .||+|++....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~-~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr--- 363 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMAR-RNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPR--- 363 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCT---
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCc---
Confidence 4679999999999999999875 7999999999998887 44555566667777887666432 89999997531
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 467 HIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 467 ~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
..-...++..+ +.|+|||.++++.
T Consensus 364 ~g~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 364 AGLHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp TCSCHHHHHHH-HHHCCSEEEEEES
T ss_pred cchHHHHHHHH-HhcCCCcEEEEEC
Confidence 11123455555 4599999999883
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.55 E-value=2.3e-07 Score=98.56 Aligned_cols=113 Identities=10% Similarity=0.063 Sum_probs=82.1
Q ss_pred cccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCC--eEE
Q 003776 365 QFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AIS 439 (796)
Q Consensus 365 ~F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~--~~~ 439 (796)
.|..+...-...+.+.+. ++.+|||+|||+|.++..++.+ .|+++|++|..+..++ +.++..++. +..
T Consensus 107 ~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~-~N~~~N~v~~~v~~ 179 (278)
T 3k6r_A 107 MFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV-ENIHLNKVEDRMSA 179 (278)
T ss_dssp CCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHH-HHHHHTTCTTTEEE
T ss_pred EEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHH-HHHHHcCCCCcEEE
Confidence 344444333445555543 4889999999999999888753 7999999998887776 556666764 456
Q ss_pred EEcCCCCCCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 440 AVMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 440 ~v~d~e~LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+..|...++. .+.||.|+++. .+ ....+|..+.++|||||.+.+.
T Consensus 180 ~~~D~~~~~~-~~~~D~Vi~~~--p~---~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 180 YNMDNRDFPG-ENIADRILMGY--VV---RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp ECSCTTTCCC-CSCEEEEEECC--CS---SGGGGHHHHHHHEEEEEEEEEE
T ss_pred EeCcHHHhcc-ccCCCEEEECC--CC---cHHHHHHHHHHHcCCCCEEEEE
Confidence 6677766653 47899999875 22 3346788889999999998764
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.54 E-value=3.9e-07 Score=102.14 Aligned_cols=108 Identities=21% Similarity=0.180 Sum_probs=78.1
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCC---
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTER--- 446 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~--- 446 (796)
.++.+.+.+.. .++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+ +.+...++. +.+...+...
T Consensus 274 l~~~~~~~l~~----~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~-~n~~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDV----QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQ-QNARLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTC----CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcC----CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHH-HHHHHcCCCceEEEECCHHHHhh
Confidence 34444444432 34679999999999999999875 8999999999998887 455556664 6777777654
Q ss_pred -CCCCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 447 -LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 447 -LPfpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+|+++++||+|+++..... ...++..+. .++|++.++++
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g----~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAG----AAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTC----CHHHHHHHH-HHCCSEEEEEE
T ss_pred hhhhhcCCCCEEEECCCCcc----HHHHHHHHH-hcCCCeEEEEE
Confidence 4566788999999763221 224555554 47999999987
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.51 E-value=8.6e-08 Score=105.25 Aligned_cols=132 Identities=17% Similarity=0.109 Sum_probs=83.3
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcC--------CCeEE
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERG--------IPAIS 439 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~erg--------l~~~~ 439 (796)
..|.+.|..... .. +.+.+||+||||+|.++..++++ .|+++|+++.++..++..+..-.+ ..+.+
T Consensus 173 ~~YhE~l~~~~~--~~-p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~v 249 (364)
T 2qfm_A 173 LAYTRAIMGSGK--ED-YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQV 249 (364)
T ss_dssp HHHHHHHTTTTC--CC-CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEE
T ss_pred hHHHHHHhhhhh--hC-CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEE
Confidence 456665543322 11 35789999999999999988875 699999999888777644321110 13566
Q ss_pred EEcCCCC-CC-C--CCCceeEEEEcCCCccccc-----chHHHHHHH----HhhcCCCcEEEEEeCCCCCCchHHHHHHH
Q 003776 440 AVMGTER-LP-F--PGIVFDAVHCARCRVPWHI-----EGGKLLLEL----NRVLRPGGFFIWSATPVYQKLPEDVEIWN 506 (796)
Q Consensus 440 ~v~d~e~-LP-f--pd~SFDlVvss~~~l~w~~-----d~~~~L~Ei----~RVLKPGG~fv~s~~~~~~~l~El~~~~~ 506 (796)
.+.|+.. +. + ..+.||+|++....++... ....+++.+ .++|+|||+|++... ...+++....+.
T Consensus 250 i~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~--s~~~~e~~~~~~ 327 (364)
T 2qfm_A 250 LIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN--CVNLTEALSLYE 327 (364)
T ss_dssp EESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE--ETTCHHHHHHHH
T ss_pred EECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC--CcchHHHHHHHH
Confidence 6676533 22 1 3578999999753212211 224566666 899999999997643 223455555554
Q ss_pred H
Q 003776 507 A 507 (796)
Q Consensus 507 ~ 507 (796)
.
T Consensus 328 ~ 328 (364)
T 2qfm_A 328 E 328 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 248
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.49 E-value=1.5e-07 Score=106.42 Aligned_cols=107 Identities=19% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCC-CCCCceeEEEEc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP-FPGIVFDAVHCA 460 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LP-fpd~SFDlVvss 460 (796)
.++.+|||+|||+|..+..|+.+ .|+++|+++.++..++ +.+...|+. +.+...|...++ +.+++||+|++.
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~-~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILS-ENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHH-HHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 35789999999999998888753 6999999999988877 445556665 445556655554 335789999974
Q ss_pred C-C----Ccccccc----------------hHHHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 461 R-C----RVPWHIE----------------GGKLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 461 ~-~----~l~w~~d----------------~~~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
. | .+..+++ ...+|.++.++|||||+|++++....
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 3 1 1111111 12678999999999999999865443
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.47 E-value=6.9e-07 Score=100.40 Aligned_cols=115 Identities=14% Similarity=0.110 Sum_probs=81.3
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-----------------CCeEEEeCChhhHHHHHHHHHHHcC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----------------RGVLTMSFAPKDEHEAQVQFALERG 434 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-----------------~~V~gvDiSp~dl~~A~~q~A~erg 434 (796)
..++.|.+.+.. ..+.+|||.|||+|.++..+++ ..++|+|+++.++..|+.... .+|
T Consensus 158 ~v~~~mv~~l~~----~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~-l~g 232 (445)
T 2okc_A 158 PLIQAMVDCINP----QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY-LHG 232 (445)
T ss_dssp HHHHHHHHHHCC----CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHHHhCC----CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH-HhC
Confidence 345566665532 3467999999999998877653 479999999998888874443 355
Q ss_pred C---CeEEEEcCCCCCCCCCCceeEEEEcCCCccccc-c---------------hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 435 I---PAISAVMGTERLPFPGIVFDAVHCARCRVPWHI-E---------------GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 435 l---~~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~~-d---------------~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
+ ...+..+|....+.. ..||+|+++..+..... + ...+|..+.++|||||++++..+
T Consensus 233 ~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 233 IGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 5 455677776555544 48999999864332111 1 13788999999999999988754
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.47 E-value=3.9e-07 Score=97.39 Aligned_cols=91 Identities=12% Similarity=-0.036 Sum_probs=63.4
Q ss_pred CCCCEEEEECC------CCch-hHHHHhh--CCeEEEeCChhhHHHHHHHHHHHcCCCeEE-EEcCCCCCCCCCCceeEE
Q 003776 388 KRTRVVLDVGC------GVAS-FGGFLFD--RGVLTMSFAPKDEHEAQVQFALERGIPAIS-AVMGTERLPFPGIVFDAV 457 (796)
Q Consensus 388 ~~~~~VLDIGC------GtG~-~a~~La~--~~V~gvDiSp~dl~~A~~q~A~ergl~~~~-~v~d~e~LPfpd~SFDlV 457 (796)
+++.+|||||| |+|. +++.+.. ..|+++|+++. + . .+.+ ...|...++++ ++||+|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~--~v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------S--DADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------C--SSSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------C--CCEEEEECccccCCcc-CcccEE
Confidence 45789999999 4475 2222222 37999999985 1 1 2456 78888777765 689999
Q ss_pred EEcCCCcccc----c-------chHHHHHHHHhhcCCCcEEEEEeCC
Q 003776 458 HCARCRVPWH----I-------EGGKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 458 vss~~~l~w~----~-------d~~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
+|+.. .++. . ....+|.++.|+|||||.|++....
T Consensus 128 vsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 128 ISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp EECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred EEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 99742 2211 1 1247899999999999999987543
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.43 E-value=1.3e-08 Score=105.16 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=71.2
Q ss_pred HHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCC
Q 003776 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG 451 (796)
Q Consensus 374 id~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd 451 (796)
++.+.+.+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ....+.+...|...++++.
T Consensus 18 ~~~i~~~~~~----~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 18 LNQIIKQLNL----KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp HHHHHHHCCC----CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCC
T ss_pred HHHHHHhcCC----CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCccc
Confidence 4556666543 35679999999999999999874 89999999988766542222 1123566677888888874
Q ss_pred -CceeEEEEcCCCccccc-------------chHHHH----HHHHhhcCCCcEEEE
Q 003776 452 -IVFDAVHCARCRVPWHI-------------EGGKLL----LELNRVLRPGGFFIW 489 (796)
Q Consensus 452 -~SFDlVvss~~~l~w~~-------------d~~~~L----~Ei~RVLKPGG~fv~ 489 (796)
++| .|+++.. ++. ....+| ..+.|+|+|||.|++
T Consensus 92 ~~~f-~vv~n~P---y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 92 KQRY-KIVGNIP---YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp SSEE-EEEEECC---SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred CCCc-EEEEeCC---ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 689 7777642 222 112223 447778888876654
No 252
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.43 E-value=7e-07 Score=98.36 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=76.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~ 446 (796)
...+.+.+.+.. ....+|||+|||+|.++..+++ ..|+|+|+++.++..| ..+.+...|...
T Consensus 26 ~l~~~~~~~~~~----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 26 EVVDFMVSLAEA----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGG
T ss_pred HHHHHHHHhhcc----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhh
Confidence 445666666653 2356999999999999998885 3799999999876444 235666777655
Q ss_pred CCCCCCceeEEEEcCCCccccc---------ch-------------------HHHHHHHHhhcCCCcEEEEEeCC
Q 003776 447 LPFPGIVFDAVHCARCRVPWHI---------EG-------------------GKLLLELNRVLRPGGFFIWSATP 493 (796)
Q Consensus 447 LPfpd~SFDlVvss~~~l~w~~---------d~-------------------~~~L~Ei~RVLKPGG~fv~s~~~ 493 (796)
.+ +.+.||+|+++..+..... +. ..+|..+.++|+|||++++..+.
T Consensus 93 ~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 93 WE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 54 3468999999753322111 10 15688899999999999987553
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.40 E-value=1.1e-06 Score=94.00 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=67.2
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
..++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++..++ ....+.+..+|...+++
T Consensus 37 ~i~~~Iv~~l~~----~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 37 NFVNKAVESANL----TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCc
Confidence 455666666653 35789999999999999999874 89999999999988875554 23356788889888898
Q ss_pred CCCceeEEEEcC
Q 003776 450 PGIVFDAVHCAR 461 (796)
Q Consensus 450 pd~SFDlVvss~ 461 (796)
++.+||+|+++.
T Consensus 111 ~~~~fD~Iv~Nl 122 (295)
T 3gru_A 111 NKLDFNKVVANL 122 (295)
T ss_dssp GGSCCSEEEEEC
T ss_pred ccCCccEEEEeC
Confidence 888899999885
No 254
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.37 E-value=2.4e-05 Score=86.16 Aligned_cols=95 Identities=16% Similarity=0.039 Sum_probs=63.9
Q ss_pred CCEEEEECCCCchhHHHHhhCCeEEEeCChhhHHHHHHHHHHHcCCCe--EEEEcCCCCCCCCCCceeEEEEcCCCcccc
Q 003776 390 TRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPA--ISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~~V~gvDiSp~dl~~A~~q~A~ergl~~--~~~v~d~e~LPfpd~SFDlVvss~~~l~w~ 467 (796)
..+||.|+.+.|.++..|+...++.+.-|- .-+.+..+.+...++.. .......+.+| ..||+|+.-. +-.
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~~ds~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~l---pk~ 111 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSIGDSY-ISELATRENLRLNGIDESSVKFLDSTADYP---QQPGVVLIKV---PKT 111 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEEESCH-HHHHHHHHHHHHTTCCGGGSEEEETTSCCC---SSCSEEEEEC---CSC
T ss_pred CCCEEEECCCCCHHHHhhccCCceEEEhHH-HHHHHHHHHHHHcCCCccceEecccccccc---cCCCEEEEEc---CCC
Confidence 468999999999999999877887774333 33344445555666653 12222223333 5799998743 323
Q ss_pred c-chHHHHHHHHhhcCCCcEEEEEe
Q 003776 468 I-EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 468 ~-d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
. .....|..+...|+||+.+++..
T Consensus 112 ~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 112 LALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 2 45678888999999999998764
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.36 E-value=6.6e-07 Score=92.65 Aligned_cols=83 Identities=16% Similarity=0.138 Sum_probs=60.5
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
.+++.+.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++..... ...+.+..+|...+++
T Consensus 17 ~~~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 17 HNIDKIMTNIRL----NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHHHHHTTCCC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCC
T ss_pred HHHHHHHHhCCC----CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCc
Confidence 455666666543 35789999999999999999875 899999999988777643321 1346677788888888
Q ss_pred CC-CceeEEEEcC
Q 003776 450 PG-IVFDAVHCAR 461 (796)
Q Consensus 450 pd-~SFDlVvss~ 461 (796)
++ ..| .|+++.
T Consensus 91 ~~~~~~-~vv~nl 102 (244)
T 1qam_A 91 PKNQSY-KIFGNI 102 (244)
T ss_dssp CSSCCC-EEEEEC
T ss_pred ccCCCe-EEEEeC
Confidence 74 456 566664
No 256
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.29 E-value=1.3e-06 Score=95.83 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=69.2
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCC-C-CCC-------------
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERL-P-FPG------------- 451 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~L-P-fpd------------- 451 (796)
+.+|||+|||+|.++..|+.. .|+++|+++.++..|+ +.+...++. +.+...++..+ + +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~-~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQ-YNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHH-HHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 568999999999999999875 7999999999998887 455566664 56666665433 1 111
Q ss_pred -CceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeC
Q 003776 452 -IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 452 -~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
..||+|++.... ..+..++.++|+|+|.+++...
T Consensus 293 ~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 293 SYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEES
T ss_pred cCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEEC
Confidence 379999986421 1245667788889998887643
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.26 E-value=4.1e-06 Score=92.70 Aligned_cols=112 Identities=14% Similarity=-0.024 Sum_probs=79.2
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh------------------------------------------C
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD------------------------------------------R 410 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~------------------------------------------~ 410 (796)
....|...... .++.+|||+|||+|.++..++. .
T Consensus 183 lAa~ll~~~~~----~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 183 LAAGLIYLTPW----KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp HHHHHHHTSCC----CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHhhCC----CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 34444444432 3468999999999998877653 2
Q ss_pred CeEEEeCChhhHHHHHHHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCCCcccc---cchHHHHHHHHhhcCC--
Q 003776 411 GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRP-- 483 (796)
Q Consensus 411 ~V~gvDiSp~dl~~A~~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~---~d~~~~L~Ei~RVLKP-- 483 (796)
.|+|+|+++.++..|+ +.+...|+. +.+...|...++.+ .+||+|+++..+..-. .+...++.++.++||+
T Consensus 259 ~V~GvDid~~ai~~Ar-~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 259 KIYGYDIDEESIDIAR-ENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CEEEEESCHHHHHHHH-HHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred eEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 5999999999999887 555556663 67788888888765 5899999986422111 1345677778888887
Q ss_pred CcEEEEE
Q 003776 484 GGFFIWS 490 (796)
Q Consensus 484 GG~fv~s 490 (796)
||.+++.
T Consensus 337 g~~~~ii 343 (385)
T 3ldu_A 337 NWSYYLI 343 (385)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 7776654
No 258
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.26 E-value=3.7e-06 Score=88.85 Aligned_cols=121 Identities=18% Similarity=0.205 Sum_probs=74.8
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAV 441 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v 441 (796)
|...+..-+..|.+.. .+ .++.+|||||||+|.|+.+++.+ .|.++++.. ++....+.. ...+..+..+.
T Consensus 55 YrSRaA~KL~ei~ek~-~l---~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~~ 128 (277)
T 3evf_A 55 AVSRGTAKLRWFHERG-YV---KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITFK 128 (277)
T ss_dssp CSSTHHHHHHHHHHTT-SS---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEEE
T ss_pred ccccHHHHHHHHHHhC-CC---CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEEe
Confidence 4444444455555552 22 35679999999999999988764 567788773 221000000 00122344555
Q ss_pred cCCCCCCCCCCceeEEEEcCCCcc----cccch--HHHHHHHHhhcCCC-cEEEEEeCC
Q 003776 442 MGTERLPFPGIVFDAVHCARCRVP----WHIEG--GKLLLELNRVLRPG-GFFIWSATP 493 (796)
Q Consensus 442 ~d~e~LPfpd~SFDlVvss~~~l~----w~~d~--~~~L~Ei~RVLKPG-G~fv~s~~~ 493 (796)
.+++...++.+.||+|+|..+ .+ |.... ..+|..+.++|||| |.|++-+.-
T Consensus 129 ~~~dv~~l~~~~~DlVlsD~a-pnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 129 DKTDIHRLEPVKCDTLLCDIG-ESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSCCTTTSCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccceehhcCCCCccEEEecCc-cCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 555556777889999999762 22 22111 13568889999999 999987554
No 259
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.25 E-value=2.4e-06 Score=94.56 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=73.4
Q ss_pred CCEEEEECCCCchhHHHHhhC---------------------CeEEEeCChhhHHHHHH-------HHHHHcC--CCeEE
Q 003776 390 TRVVLDVGCGVASFGGFLFDR---------------------GVLTMSFAPKDEHEAQV-------QFALERG--IPAIS 439 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~---------------------~V~gvDiSp~dl~~A~~-------q~A~erg--l~~~~ 439 (796)
..+|+|+||++|..+..+... .|..-|+...|.+.-.. ......| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999877766431 34556766444432211 1112223 22334
Q ss_pred EEcC---CCCCCCCCCceeEEEEcCCCcccccchHH------------------------H---------------HHHH
Q 003776 440 AVMG---TERLPFPGIVFDAVHCARCRVPWHIEGGK------------------------L---------------LLEL 477 (796)
Q Consensus 440 ~v~d---~e~LPfpd~SFDlVvss~~~l~w~~d~~~------------------------~---------------L~Ei 477 (796)
..+. .-...||+++||+|+|+.+ +||..+.+. + |+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 2345689999999999986 999764321 1 5556
Q ss_pred HhhcCCCcEEEEEeCCCCCCc--h-----HHHHHHHHH
Q 003776 478 NRVLRPGGFFIWSATPVYQKL--P-----EDVEIWNAM 508 (796)
Q Consensus 478 ~RVLKPGG~fv~s~~~~~~~l--~-----El~~~~~~l 508 (796)
.|.|+|||+|+++ ..+.... . .+..+|..+
T Consensus 212 a~eL~pGG~mvl~-~~gr~~~~~~~~~~~~l~~al~~l 248 (384)
T 2efj_A 212 SEELISRGRMLLT-FICKEDEFDHPNSMDLLEMSINDL 248 (384)
T ss_dssp HHHEEEEEEEEEE-EECCCTTTCCCCHHHHHHHHHHHH
T ss_pred HHHhccCCeEEEE-EecCCCcccCcccHHHHHHHHHHH
Confidence 8999999999988 4444443 2 556666654
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.25 E-value=1.2e-06 Score=96.72 Aligned_cols=102 Identities=17% Similarity=0.203 Sum_probs=68.1
Q ss_pred CCCEEEEECCCCchhHHHHhh-------------------CCeEEEeCChhhHHHHHHHHHHH------------c--CC
Q 003776 389 RTRVVLDVGCGVASFGGFLFD-------------------RGVLTMSFAPKDEHEAQVQFALE------------R--GI 435 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~-------------------~~V~gvDiSp~dl~~A~~q~A~e------------r--gl 435 (796)
...+|+|+|||+|..+..+.. .+|..-|+...|.+.-....... . +.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 357899999999988877622 15667788777764433222210 0 01
Q ss_pred CeEEEEcC-CCCCCCCCCceeEEEEcCCCcccccch--------------------------------------HHHHHH
Q 003776 436 PAISAVMG-TERLPFPGIVFDAVHCARCRVPWHIEG--------------------------------------GKLLLE 476 (796)
Q Consensus 436 ~~~~~v~d-~e~LPfpd~SFDlVvss~~~l~w~~d~--------------------------------------~~~L~E 476 (796)
.....+.+ .-.-.||+++||+|+|+.+ +||..+. ..+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333 2334589999999999986 9997622 346888
Q ss_pred HHhhcCCCcEEEEEe
Q 003776 477 LNRVLRPGGFFIWSA 491 (796)
Q Consensus 477 i~RVLKPGG~fv~s~ 491 (796)
.+|.|+|||+|+++.
T Consensus 211 ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEE
Confidence 899999999999884
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.24 E-value=5.1e-06 Score=92.28 Aligned_cols=100 Identities=13% Similarity=-0.010 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchhHHHHhh--C----------------------------------------CeEEEeCChhhHHHHH
Q 003776 389 RTRVVLDVGCGVASFGGFLFD--R----------------------------------------GVLTMSFAPKDEHEAQ 426 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~--~----------------------------------------~V~gvDiSp~dl~~A~ 426 (796)
++..|||++||+|.++..++. . .|+|+|+++.++..|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 467999999999998776653 1 3999999999999887
Q ss_pred HHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCCCcccc---cchHHHHHHHHhhcCC--CcEEEEE
Q 003776 427 VQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRP--GGFFIWS 490 (796)
Q Consensus 427 ~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~---~d~~~~L~Ei~RVLKP--GG~fv~s 490 (796)
+.+...|+. +.+...|...++.+ .+||+|+++..+.... .+...++.++.++||+ ||.+++.
T Consensus 281 -~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 281 -QNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp -HHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred -HHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 555666764 67888888888765 4899999986321111 1334566777777776 8877654
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.22 E-value=3.5e-06 Score=88.26 Aligned_cols=83 Identities=10% Similarity=0.115 Sum_probs=62.1
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
..++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++..... ...+.+..+|+..+++
T Consensus 16 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 16 FVLQKIVSAIHP----QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCH
Confidence 345556665543 35789999999999999999886 899999999998887644432 3356788888888876
Q ss_pred CC----CceeEEEEcC
Q 003776 450 PG----IVFDAVHCAR 461 (796)
Q Consensus 450 pd----~SFDlVvss~ 461 (796)
++ ..|| |+++.
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 53 5688 77764
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.20 E-value=4.4e-06 Score=88.34 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=66.3
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPf 449 (796)
..++.|.+.+.. .++ +|||||||+|.++..|+++ .|+++|+++.++..++.... +..+.+..+|...+++
T Consensus 34 ~i~~~Iv~~~~~----~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAARP----FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHCC----CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHhcCC----CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCCh
Confidence 445566665543 346 9999999999999999886 89999999999887764433 2356778888888887
Q ss_pred CCC-ceeEEEEcCCCcccccchHH
Q 003776 450 PGI-VFDAVHCARCRVPWHIEGGK 472 (796)
Q Consensus 450 pd~-SFDlVvss~~~l~w~~d~~~ 472 (796)
++. .||.|+++. +++...+.
T Consensus 106 ~~~~~~~~iv~Nl---Py~iss~i 126 (271)
T 3fut_A 106 EEVPQGSLLVANL---PYHIATPL 126 (271)
T ss_dssp GGSCTTEEEEEEE---CSSCCHHH
T ss_pred hhccCccEEEecC---cccccHHH
Confidence 643 689999985 45554433
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.16 E-value=1.4e-05 Score=88.61 Aligned_cols=100 Identities=13% Similarity=0.014 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCchhHHHHhh--C----------------------------------------CeEEEeCChhhHHHHH
Q 003776 389 RTRVVLDVGCGVASFGGFLFD--R----------------------------------------GVLTMSFAPKDEHEAQ 426 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~--~----------------------------------------~V~gvDiSp~dl~~A~ 426 (796)
++..|||.+||+|.++..++. . .|+|+|+++.++..|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 468999999999998876653 1 3999999999999887
Q ss_pred HHHHHHcCCC--eEEEEcCCCCCCCCCCceeEEEEcCCCcccc---cchHHHHHHHHhhcCC--CcEEEEE
Q 003776 427 VQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRP--GGFFIWS 490 (796)
Q Consensus 427 ~q~A~ergl~--~~~~v~d~e~LPfpd~SFDlVvss~~~l~w~---~d~~~~L~Ei~RVLKP--GG~fv~s 490 (796)
+.+...|+. +.+...|...++.+ .+||+|+++..+-.-. .+...++.++.++||+ ||.+++.
T Consensus 274 -~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 274 -KNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp -HHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred -HHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 556667764 67788888888776 4899999985311111 2345677778888877 8877765
No 265
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.14 E-value=1.2e-06 Score=90.29 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=68.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh--cccccccccccccCCCCcccccccccc-cccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER--GLFGIYHDWCESFSTYPRTYDLLHADH-LFSKIK 719 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR--Glig~~~~~ce~f~typrtyDl~Ha~~-~~s~~~ 719 (796)
-..|||+|||.|.++..|..... +|+-+|-. ..+..+-++ ++--+..|.. .++. +.+||+|.+.. +|..+.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCCc-cCCcCEEEEcCchhhhcC
Confidence 46799999999999999988743 34444543 455555555 2222223433 3443 78999999887 777655
Q ss_pred CCcchHHHHHhhcccccCCcEEEEe
Q 003776 720 KRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 720 ~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
..-.+..+|-++-|+|||||+++|.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4445667899999999999999995
No 266
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.13 E-value=1.5e-06 Score=86.20 Aligned_cols=131 Identities=14% Similarity=0.215 Sum_probs=88.2
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhccccccccccccc---CCCC-ccccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCESF---STYP-RTYDLLHADHLFSKI 718 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~f---~typ-rtyDl~Ha~~~~s~~ 718 (796)
-..|||+|||.|.++.+|..... +|+-+|-. ..+..+-+++.+.+.+.-...+ +..+ .+||+|.+.++|.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 37899999999999999988754 34444444 5667777776443332212222 3334 4599999988877
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEeccH--------------------------------HHHHHHHHHHhcCCceEEE
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRDDV--------------------------------ETINELESMVKGMQWEVRM 766 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd~~--------------------------------~~~~~~~~~~~~l~W~~~~ 766 (796)
......+|-++-|+|+|||++++.+.. -....+..+++.--+++.-
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 245668899999999999999996420 1457788888888888764
Q ss_pred eec-c------CCceEEEEEec
Q 003776 767 TYS-K------DKEGLLCVEKS 781 (796)
Q Consensus 767 ~~~-~------~~e~~l~~~K~ 781 (796)
... . ...-+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 321 1 12356677764
No 267
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.09 E-value=1.3e-06 Score=86.24 Aligned_cols=94 Identities=18% Similarity=0.223 Sum_probs=65.0
Q ss_pred cccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---cc-cccccccccCCCCccccccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---FG-IYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig-~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
.|||+|||.|.++..|...+- ..|+-+|.. ..+..+-++ |+ +- +..|. +.++.-+.+||+|.+.++|.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV-HNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT-TBCSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH-HHCCCCcccccEEEECchHh
Confidence 899999999999999987632 234444443 455554444 33 22 23333 23343348999999988877
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.+. ....+|-++-|+|||||++++.+
T Consensus 123 ~~~---~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FWE---DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc---CHHHHHHHHHHhCCCCCEEEEEe
Confidence 663 45678999999999999999963
No 268
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.07 E-value=6.7e-06 Score=90.90 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=66.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc-cccc-cccccccCCCCcccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL-FGIY-HDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl-ig~~-~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
..|||+|||.|.|+.+|..... .|+-+|.. ..+..+-+ .|+ +-++ .|... ++.-+.+||+|-++..|..
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~-~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE-ALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-TSCTTCCEEEEEECCCCCT
T ss_pred CEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh-ccccCCCeEEEEECCchhh
Confidence 4799999999999999987754 33334433 33332222 232 2222 23322 2221369999998877754
Q ss_pred ccC--CcchHHHHHhhcccccCCcEEEEeccH--HHHHHHHHHHh
Q 003776 718 IKK--RCNLVAVVAEVDRILRPEGKLIVRDDV--ETINELESMVK 758 (796)
Q Consensus 718 ~~~--rC~~~~~l~E~DRiLRP~G~~i~rd~~--~~~~~~~~~~~ 758 (796)
... .-.+..+|-++-|+|+|||.++|.-+. .+-..++....
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 221 223457889999999999999996433 23444444443
No 269
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.06 E-value=3.4e-06 Score=80.71 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=87.0
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCcccccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHADHLFSKIK 719 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha~~~~s~~~ 719 (796)
.-..|||+|||.|.++.+|.... . +|+-+|-. ..+..+-++. +--+..| ++.-+.+||+|.+..+|..+.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc
Confidence 45679999999999999998764 1 56666654 5666666651 2222233 333347999999988887664
Q ss_pred CCcchHHHHHhhcccccCCcEEEEeccH-------------HHHHHHHHHHhcCCceEEEee-ccCCceEEEEEecccC
Q 003776 720 KRCNLVAVVAEVDRILRPEGKLIVRDDV-------------ETINELESMVKGMQWEVRMTY-SKDKEGLLCVEKSMWR 784 (796)
Q Consensus 720 ~rC~~~~~l~E~DRiLRP~G~~i~rd~~-------------~~~~~~~~~~~~l~W~~~~~~-~~~~e~~l~~~K~~w~ 784 (796)
....+|-++-|+|+|||++++.+-. -....++.+++ .|++.... .....-.+++.|+==+
T Consensus 90 ---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~~ 163 (170)
T 3i9f_A 90 ---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTSE 163 (170)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCCC
T ss_pred ---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCCC
Confidence 4567899999999999999996321 12456667766 77765432 2234456777665433
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.05 E-value=6.7e-06 Score=94.89 Aligned_cols=115 Identities=17% Similarity=0.025 Sum_probs=78.4
Q ss_pred HHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh----------------------CCeEEEeCChhhHHHHHHHHH
Q 003776 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD----------------------RGVLTMSFAPKDEHEAQVQFA 430 (796)
Q Consensus 373 yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~----------------------~~V~gvDiSp~dl~~A~~q~A 430 (796)
.++.|.+.+.. ..+.+|||.+||+|.|+..+++ ..++|+|+++.++..|+....
T Consensus 157 iv~~mv~~l~p----~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 157 LIKTIIHLLKP----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 44555555432 3467999999999998876643 269999999998887775443
Q ss_pred HHcCCC------eEEEEcCCCCCC-CCCCceeEEEEcCCCccccc------------c-hHHHHHHHHhhcCCCcEEEEE
Q 003776 431 LERGIP------AISAVMGTERLP-FPGIVFDAVHCARCRVPWHI------------E-GGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 431 ~ergl~------~~~~v~d~e~LP-fpd~SFDlVvss~~~l~w~~------------d-~~~~L~Ei~RVLKPGG~fv~s 490 (796)
. .++. ..+...|....+ .+...||+|+++..+..... + ...+|..+.+.|||||++++.
T Consensus 233 l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 233 L-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp T-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred H-hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 3 4544 445666654332 34568999999864222110 1 136888899999999999987
Q ss_pred eC
Q 003776 491 AT 492 (796)
Q Consensus 491 ~~ 492 (796)
.+
T Consensus 312 ~p 313 (541)
T 2ar0_A 312 VP 313 (541)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 271
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.05 E-value=2.7e-05 Score=83.74 Aligned_cols=105 Identities=8% Similarity=-0.019 Sum_probs=71.7
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCeEEEeCChhhHHHHHHHHHHHcCCC-eEEEEcCCCCCCCCC---CceeEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPG---IVFDAVH 458 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~-----~~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~v~d~e~LPfpd---~SFDlVv 458 (796)
.++.+|||+|||+|..+..|+. ..|+++|+++.++..++ +.+...|+. +.+...|...++... ..||.|+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~-~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA-TLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 3578999999999999988876 26999999999988887 445556664 566677766665332 5799999
Q ss_pred EcC-----CCccccc-----------ch-------HHHHHHHHhhcCCCcEEEEEeCCC
Q 003776 459 CAR-----CRVPWHI-----------EG-------GKLLLELNRVLRPGGFFIWSATPV 494 (796)
Q Consensus 459 ss~-----~~l~w~~-----------d~-------~~~L~Ei~RVLKPGG~fv~s~~~~ 494 (796)
+.. ..+.-++ +. ..+|..+.++|+ ||+|++++...
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 731 1121111 11 245677777887 99999886544
No 272
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.04 E-value=1.4e-06 Score=84.97 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=74.4
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc--cc-cccccccccCCCCcccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL--FG-IYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl--ig-~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
-.+|||+|||.|.++..|..... +|+-+|.. ..+..+-+ +|+ +- +..|.. .++. +.+||+|.+.++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCCceEEEEcchh
Confidence 45899999999999999887643 33333433 33333322 333 21 223433 2443 7899999988877
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEecc--------------HHHHHHHHHHHhcCCceEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRDD--------------VETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~--------------~~~~~~~~~~~~~l~W~~~~~ 767 (796)
.... .-.+..+|-++-|+|+|||++++-+. .-....++++... |++...
T Consensus 108 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 108 MFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp GGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 6543 22456789999999999999877421 0134566777766 877653
No 273
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.03 E-value=4.9e-06 Score=82.83 Aligned_cols=133 Identities=16% Similarity=0.250 Sum_probs=86.8
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh---cccccccccccccCCCCccccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER---GLFGIYHDWCESFSTYPRTYDLLHADHLFSKI 718 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR---Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~ 718 (796)
.-..|||+|||.|.++..|..... +|+-+|.. ..+..+-++ ++--+..|... ++. +.+||+|.+.++|..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FEV-PTSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CCC-CSCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cCC-CCCeEEEEECcchhcC
Confidence 456799999999999999987643 34444443 445555444 22222333322 332 3899999998887655
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEeccH----H---------------------------HHHHHHHHHhcCCceEEEe
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRDDV----E---------------------------TINELESMVKGMQWEVRMT 767 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd~~----~---------------------------~~~~~~~~~~~l~W~~~~~ 767 (796)
... ....+|-++-|+|||||++++.+.. . ....++.+++..-+++...
T Consensus 120 ~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 120 TDD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred ChH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 322 1133799999999999999997311 1 1356778888888887766
Q ss_pred eccCCceEEEEEec
Q 003776 768 YSKDKEGLLCVEKS 781 (796)
Q Consensus 768 ~~~~~e~~l~~~K~ 781 (796)
...+-.-++.++|+
T Consensus 199 ~~~~~~w~~~~~~~ 212 (220)
T 3hnr_A 199 RLNHFVWVMEATKQ 212 (220)
T ss_dssp ECSSSEEEEEEEEC
T ss_pred eccceEEEEeehhh
Confidence 44445556666664
No 274
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.03 E-value=8.9e-06 Score=80.94 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=81.6
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCCCChhHHHhhcccccccccccccCCCCccccccccccccccccCCc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKRC 722 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~rC 722 (796)
.-..|||+|||.|.++..|. ..|..+-+.|. .+.+ +..|. +.++.-+.+||+|.+..+|. + -
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~~~~--------~~~d~-~~~~~~~~~fD~v~~~~~l~-~---~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL----DPRV--------TVCDM-AQVPLEDESVDVAVFCLSLM-G---T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS----STTE--------EESCT-TSCSCCTTCEEEEEEESCCC-S---S
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC----CceE--------EEecc-ccCCCCCCCEeEEEEehhcc-c---c
Confidence 34579999999999998884 45555444433 1111 11222 22333357999999988874 2 3
Q ss_pred chHHHHHhhcccccCCcEEEEeccHH---HHHHHHHHHhcCCceEEEeecc-CCceEEEEEec
Q 003776 723 NLVAVVAEVDRILRPEGKLIVRDDVE---TINELESMVKGMQWEVRMTYSK-DKEGLLCVEKS 781 (796)
Q Consensus 723 ~~~~~l~E~DRiLRP~G~~i~rd~~~---~~~~~~~~~~~l~W~~~~~~~~-~~e~~l~~~K~ 781 (796)
....+|-++-|+|+|||++++.+... ....+..++...-+++...... ..-.+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEec
Confidence 46788999999999999999976443 4577888888888887654322 23467888886
No 275
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.02 E-value=1.3e-06 Score=91.01 Aligned_cols=98 Identities=11% Similarity=0.160 Sum_probs=65.4
Q ss_pred cccccccCccccceeeecc-CCCeEEEEeecCCCC-CChhHHHhh----cccccccccccccCCCCcccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMK-DISVWVMNVISIDSP-DTLPIIYER----GLFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~-~~~vwvmnv~p~~~~-~~l~~i~eR----Glig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
-..|||+|||.|+++.+|. ..+. .|+-+|-. ..+..+-+| |+..-..-.+..+..+|.+||+|++.++|..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 3579999999999998887 3344 33334433 555555544 4322222122223334589999999988876
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+.. -....+|-++-|+|||||.+++.+
T Consensus 142 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 532 345678999999999999999853
No 276
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.01 E-value=8.5e-07 Score=92.83 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=60.8
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcccccccccccccCCCCccccccccccccccccCCcc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKRCN 723 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~rC~ 723 (796)
..|||+|||.|.++..|..+--= |+-+|.. ..|..+-.+.=|-..+.=.+.++.-+.+||+|.+..+| .|. .
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~---v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~---~ 113 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFER---VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF---D 113 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSE---EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC---C
T ss_pred CCEEEEcCCCCHHHHHHHHhCCE---EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHh---h
Confidence 46999999999999999876432 2333322 23332222221222222224455445899999998887 443 4
Q ss_pred hHHHHHhhcccccCCcEEEEe
Q 003776 724 LVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 724 ~~~~l~E~DRiLRP~G~~i~r 744 (796)
...+|-|+-|||||||.|++-
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEE
Confidence 667899999999999999873
No 277
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.01 E-value=1.3e-06 Score=87.91 Aligned_cols=93 Identities=19% Similarity=0.405 Sum_probs=64.4
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh---cccccccccccccCCCCccccccccccccccccC
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER---GLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR---Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~ 720 (796)
..|||+|||.|.++..|....- +|+-+|.. ..+..+-++ ++--+..|..+.+ .+.+||+|++.++|....
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~- 117 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHID- 117 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGCS-
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhhc-
Confidence 3599999999999999987632 33333433 444444444 3222233433332 368999999999887664
Q ss_pred CcchHHHHHhhc-ccccCCcEEEEec
Q 003776 721 RCNLVAVVAEVD-RILRPEGKLIVRD 745 (796)
Q Consensus 721 rC~~~~~l~E~D-RiLRP~G~~i~rd 745 (796)
....+|-|+- |+|||||++++..
T Consensus 118 --~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 --DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 3467899999 9999999999964
No 278
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.00 E-value=2.8e-06 Score=84.05 Aligned_cols=112 Identities=18% Similarity=0.341 Sum_probs=75.4
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cccc---cccccccccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLFG---IYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Glig---~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
..|||+|||.|.++.+|...+. ..|+-+|.. ..+..+-++ |+-. +..|+ ++..+.+||+|.++.++.
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSL---LADVDGKFDLIVANILAE 136 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST---TTTCCSCEEEEEEESCHH
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc---cccCCCCceEEEECCcHH
Confidence 5799999999999999887653 133334433 344444433 4322 22233 233358999999876654
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEEEe
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~~~ 767 (796)
. +..+|-++-|+|||||++++.+ .......+..++....++....
T Consensus 137 ~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 137 I------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp H------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred H------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 2 4678999999999999999974 3335667778887777877554
No 279
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.99 E-value=1.2e-06 Score=89.19 Aligned_cols=94 Identities=16% Similarity=0.244 Sum_probs=66.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhccccccccccc---ccCCCCcccccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCE---SFSTYPRTYDLLHADHLFSKIK 719 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce---~f~typrtyDl~Ha~~~~s~~~ 719 (796)
-..|||+|||.|.|+.+|..... +|+-+|-. ..+..+-+| +--+..|... +|+ +.+||+|.+.++|....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~--~~~fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLP--DKYLDGVMISHFVEHLD 115 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSC--TTCBSEEEEESCGGGSC
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcC--CCCeeEEEECCchhhCC
Confidence 46799999999999998877543 23334443 566666666 2222223322 333 48999999988887654
Q ss_pred CCcchHHHHHhhcccccCCcEEEEe
Q 003776 720 KRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 720 ~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.-.+..+|-++-|+|+|||++++.
T Consensus 116 -~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 116 -PERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp -GGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred -cHHHHHHHHHHHHHcCCCcEEEEE
Confidence 334577899999999999999996
No 280
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.99 E-value=4.1e-06 Score=92.03 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=68.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC--------------------CeEEEeCChhhHHHHHHHHHHH-cCCCeEEEEc--C-C
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--------------------GVLTMSFAPKDEHEAQVQFALE-RGIPAISAVM--G-T 444 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--------------------~V~gvDiSp~dl~~A~~q~A~e-rgl~~~~~v~--d-~ 444 (796)
...+|+|+||++|..+..+... .|..-|+...|.+........- ......+..+ + .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3568999999999766544321 4677888888876654222110 0001223222 2 3
Q ss_pred CCCCCCCCceeEEEEcCCCcccccchH---------------------------------HHHHHHHhhcCCCcEEEEEe
Q 003776 445 ERLPFPGIVFDAVHCARCRVPWHIEGG---------------------------------KLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 445 e~LPfpd~SFDlVvss~~~l~w~~d~~---------------------------------~~L~Ei~RVLKPGG~fv~s~ 491 (796)
-...||+++||+|+|+.+ +||..+.+ .+|+-..+.|+|||+|++..
T Consensus 131 y~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 446789999999999986 99976422 23888899999999999873
No 281
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.98 E-value=6.9e-06 Score=90.77 Aligned_cols=97 Identities=14% Similarity=0.012 Sum_probs=71.8
Q ss_pred CCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHc--------------CCC-eEEEEcCCCCCC-C
Q 003776 390 TRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER--------------GIP-AISAVMGTERLP-F 449 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~er--------------gl~-~~~~v~d~e~LP-f 449 (796)
+.+|||+|||+|.++..++.+ .|+++|+++..+..++....... ++. +.+...|+..+. .
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 679999999999999988764 69999999999888875444431 665 556666653331 1
Q ss_pred CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 450 pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
....||+|+... . -....+|..+.+.|||||+++++.
T Consensus 128 ~~~~fD~I~lDP--~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP--F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC--C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999753 1 134688899999999999988874
No 282
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.98 E-value=4.7e-06 Score=82.04 Aligned_cols=119 Identities=11% Similarity=0.110 Sum_probs=82.8
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCccccccccccccccccC
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~ 720 (796)
-..|||+|||.|.|+..|..... .|+-+|.. ..+..+-+|. +--+..|. +.++.-+.+||+|.+.++|..+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMG- 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCC-
Confidence 45799999999999999987643 33444443 4556666653 22222333 23443358999999988877653
Q ss_pred CcchHHHHHhhcccccCCcEEEEeccH----------------HHHHHHHHHHhcCCceEEEe
Q 003776 721 RCNLVAVVAEVDRILRPEGKLIVRDDV----------------ETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 721 rC~~~~~l~E~DRiLRP~G~~i~rd~~----------------~~~~~~~~~~~~l~W~~~~~ 767 (796)
+-.+..+|-++-|+|+|||++++.... -....+..+++...|++...
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 335677899999999999999986421 13677888888888988654
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.93 E-value=0.00011 Score=78.71 Aligned_cols=120 Identities=12% Similarity=0.111 Sum_probs=82.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-c----CCCeEEEEcCC-CCCCCCCCceeEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R----GIPAISAVMGT-ERLPFPGIVFDAV 457 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-r----gl~~~~~v~d~-e~LPfpd~SFDlV 457 (796)
+..++||-||.|.|..++.+++. .|+.++|++..+..++.-+..- . ...+...+.|. .-+--..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45789999999999999999875 6999999998887776544321 1 24467777775 4444556889999
Q ss_pred EEcCCCcccc----cchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHH
Q 003776 458 HCARCRVPWH----IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAM 508 (796)
Q Consensus 458 vss~~~l~w~----~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~l 508 (796)
+.-.. -+.. .--..++..++|+|+|||.|+......+-.........+.+
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l 215 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKL 215 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHH
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHH
Confidence 98541 1111 12358999999999999999975433333344444444443
No 284
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.93 E-value=2.2e-06 Score=90.34 Aligned_cols=94 Identities=11% Similarity=0.133 Sum_probs=66.5
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
-..|||+|||.|.++..|... +. .|+-+|-. ..+..+-+| |+- -+..|+. .++.+||+|.+..
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~~~~fD~v~~~~ 145 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE----EFDEPVDRIVSLG 145 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG----GCCCCCSEEEEES
T ss_pred cCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH----HcCCCccEEEEcc
Confidence 457999999999999998776 53 33444433 555555444 442 2233432 2379999999998
Q ss_pred ccccccCC------cchHHHHHhhcccccCCcEEEEe
Q 003776 714 LFSKIKKR------CNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 714 ~~s~~~~r------C~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+|....+. -.+..+|-++-|+|||||.++|.
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 88776432 44578899999999999999986
No 285
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.91 E-value=6.9e-06 Score=82.00 Aligned_cols=136 Identities=11% Similarity=0.083 Sum_probs=83.5
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh------------cccccccccccccCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER------------GLFGIYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR------------Glig~~~~~ce~f~typrtyDl~ 709 (796)
.-+.|||+|||.|.|+.+|....- ..+|+-+|-. ..+..+-++ .+-=+..|. ..++..+.+||+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V 106 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAA 106 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEE
Confidence 346899999999999999987520 0123333333 344444333 222122343 2233334699999
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEeccHH--------------------------HHHHHHHHHhcCCce
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVE--------------------------TINELESMVKGMQWE 763 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~--------------------------~~~~~~~~~~~l~W~ 763 (796)
.+..+|..+. .-.+..+|-++-|+|||||++|+..... +..-++.++...-++
T Consensus 107 ~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 107 TVIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYS 185 (219)
T ss_dssp EEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEE
T ss_pred EEHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcE
Confidence 9988887663 2234578999999999999888643221 222233777777787
Q ss_pred EEEeec-------cCCceEEEEEec
Q 003776 764 VRMTYS-------KDKEGLLCVEKS 781 (796)
Q Consensus 764 ~~~~~~-------~~~e~~l~~~K~ 781 (796)
+....- ...-+|.|++|.
T Consensus 186 v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 186 VRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEEecCCccccCCCCeEEEEEecc
Confidence 766521 124579999885
No 286
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.90 E-value=2.3e-06 Score=85.18 Aligned_cols=98 Identities=16% Similarity=0.289 Sum_probs=69.6
Q ss_pred cccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----ccc-cccccccccCCCCcccccccccccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----LFG-IYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----lig-~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
..-.+|||+|||.|.++.+|.... .+|+-+|.. ..+..+-++. -|- +..|. +.++ .+.+||+|.+.++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEVL 124 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESCG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccHH
Confidence 345689999999999999998763 355555554 4555555442 122 22333 2333 35899999999888
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
....+.-.+..+|-++-|+|+|||++++.
T Consensus 125 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 125 YYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp GGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 77665555567899999999999999995
No 287
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.90 E-value=2e-06 Score=90.05 Aligned_cols=96 Identities=21% Similarity=0.332 Sum_probs=66.0
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc---cc-cccccccccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL---FG-IYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl---ig-~~~~~ce~f~typrtyDl~Ha~ 712 (796)
.-..|||+|||.|.++..|... +. .|+-+|-. ..+..+-+ .|+ |- +..|+ +.+|.-+.+||+|++.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSCSSCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccCCCCCCCEeEEEec
Confidence 4457999999999999988765 43 34444443 44544433 343 22 22333 2344334799999998
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++|..+.. ...+|-++-|+|||||++++.+
T Consensus 158 ~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 158 DAFLHSPD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 88877654 5788999999999999999863
No 288
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.90 E-value=1.4e-05 Score=88.88 Aligned_cols=97 Identities=14% Similarity=0.015 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CeEEEeCChhhHHHHHHHHHHHcCCC---eEEEEcCCCCC-C-CCCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTERL-P-FPGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-----~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~v~d~e~L-P-fpd~SFDlVv 458 (796)
++.+|||++||+|.++..++.+ .|+++|+++..+..++ +.+...++. +.+...|+..+ . .....||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~-~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK-ENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH-HHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 4679999999999999988862 5999999998887776 555566764 55566664222 1 1235799999
Q ss_pred EcCCCcccccchHHHHHHHHhhcCCCcEEEEEe
Q 003776 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 459 ss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
+.. . ..+..++..+.+.|+|||+|+++.
T Consensus 131 lDP--~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP--F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC--C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 875 1 123568899999999999998874
No 289
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.90 E-value=8.3e-06 Score=83.26 Aligned_cols=121 Identities=13% Similarity=0.070 Sum_probs=74.9
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc-----------------------------------
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----------------------------------- 687 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----------------------------------- 687 (796)
-..|||+|||.|.++..|..... -.|+-+|-. ..+..+-++-
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 46799999999999988876543 244444443 3333332221
Q ss_pred cc--ccccccccccCCCC---ccccccccccccccccCC-cchHHHHHhhcccccCCcEEEEeccHH-------------
Q 003776 688 LF--GIYHDWCESFSTYP---RTYDLLHADHLFSKIKKR-CNLVAVVAEVDRILRPEGKLIVRDDVE------------- 748 (796)
Q Consensus 688 li--g~~~~~ce~f~typ---rtyDl~Ha~~~~s~~~~r-C~~~~~l~E~DRiLRP~G~~i~rd~~~------------- 748 (796)
-| -+..|.....+..+ .+||+|.+..+|...... -.+..+|-++-|+|||||++|+.+...
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 02 12233333222223 799999988877643322 235678999999999999999964210
Q ss_pred ---HHHHHHHHHhcCCceEEE
Q 003776 749 ---TINELESMVKGMQWEVRM 766 (796)
Q Consensus 749 ---~~~~~~~~~~~l~W~~~~ 766 (796)
....+..++...-+.+..
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEE
Confidence 234677777766776644
No 290
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.89 E-value=2.5e-05 Score=91.51 Aligned_cols=97 Identities=10% Similarity=0.014 Sum_probs=65.6
Q ss_pred CCCEEEEECCCCchhHHHH---hhC-----CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCCCCceeEEE
Q 003776 389 RTRVVLDVGCGVASFGGFL---FDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVH 458 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~L---a~~-----~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfpd~SFDlVv 458 (796)
....|||+|||+|-+.... .++ +|++++-++ +...+. +.....+. .+.++.++++.+..| ..+|+||
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~-~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTL-ENWQFEEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHH-HHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHH-HHHHhccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 3457999999999773333 222 689999998 433343 33344444 366777888887766 6799999
Q ss_pred EcC-CCcccccchHHHHHHHHhhcCCCcEEE
Q 003776 459 CAR-CRVPWHIEGGKLLLELNRVLRPGGFFI 488 (796)
Q Consensus 459 ss~-~~l~w~~d~~~~L~Ei~RVLKPGG~fv 488 (796)
|=. .++....-...+|....|.|||||.++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 932 112223334578888899999999987
No 291
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.89 E-value=1.2e-05 Score=80.87 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=65.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-cc-cccccccccCCCCcccccccccc-cc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-FG-IYHDWCESFSTYPRTYDLLHADH-LF 715 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig-~~~~~ce~f~typrtyDl~Ha~~-~~ 715 (796)
-..|||+|||.|.++..|..... .|+-+|.. ..+..+-++ |+ +- +..|. ..++ ++.+||+|.+.+ +|
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI-SNLN-INRKFDLITCCLDST 112 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG-GGCC-CSCCEEEEEECTTGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc-ccCC-ccCCceEEEEcCccc
Confidence 45799999999999999987643 34444443 444444333 21 11 22233 2233 358999999987 88
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
..+...-.+..+|-++-|+|+|||++++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76644345678899999999999999983
No 292
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.89 E-value=6.3e-06 Score=81.97 Aligned_cols=132 Identities=14% Similarity=0.122 Sum_probs=85.7
Q ss_pred ccccccccCccccceeeeccCCC---eEEEEeecCCCC-CChhHHHhh----cc---cccccccccccCCCCcccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDIS---VWVMNVISIDSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~---vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~~~~~ce~f~typrtyDl~Ha 711 (796)
.-..|||+|||.|.++.+|...- . .|+-+|.. ..+..+-++ |+ --+..|. +.++.-+.+||+|.+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~ 112 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKG---KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFM 112 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEe
Confidence 34579999999999998886542 2 22223332 344444333 32 1122333 233333478999999
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEeccH-------------HHHHHHHHHHhcCCceEEEe-eccCCceEEE
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV-------------ETINELESMVKGMQWEVRMT-YSKDKEGLLC 777 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-------------~~~~~~~~~~~~l~W~~~~~-~~~~~e~~l~ 777 (796)
.++|..+. ....+|-++-|+|||||++++.+-. -....+..+++...|+.... .......+++
T Consensus 113 ~~~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~ 189 (219)
T 3dh0_A 113 AFTFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVY 189 (219)
T ss_dssp ESCGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEE
T ss_pred ehhhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEE
Confidence 88887664 3567899999999999999996411 13577888888888886543 3334556777
Q ss_pred EEec
Q 003776 778 VEKS 781 (796)
Q Consensus 778 ~~K~ 781 (796)
++|+
T Consensus 190 ~~k~ 193 (219)
T 3dh0_A 190 AMIV 193 (219)
T ss_dssp EECC
T ss_pred EEec
Confidence 7775
No 293
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.87 E-value=2.7e-06 Score=82.08 Aligned_cols=110 Identities=17% Similarity=0.249 Sum_probs=68.7
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-----cccccccccccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-----FGIYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-----ig~~~~~ce~f~typrtyDl~Ha~ 712 (796)
.-..|||+|||.|.++.+|..... +|+-+|.. ..+..+-++ |+ --+..|+.+.++ +.+||+|.++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 345799999999999988877632 33333433 344443333 32 223445555444 5789999987
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEeccH-HHHHHHHHHHhc
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV-ETINELESMVKG 759 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-~~~~~~~~~~~~ 759 (796)
..|.. ..-.+..+|-++-|+|+|||++++.... .....+...++.
T Consensus 127 ~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~ 172 (194)
T 1dus_A 127 PPIRA--GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKD 172 (194)
T ss_dssp CCSTT--CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHH
T ss_pred CCccc--chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHH
Confidence 76542 1223567899999999999999996433 233334444433
No 294
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.87 E-value=1.1e-05 Score=77.26 Aligned_cols=114 Identities=15% Similarity=0.171 Sum_probs=74.6
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----cc---cccccccccccCCCCcccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
.-..|||+|||.|.++..|... |- ..|+-+|-. ..+..+-++ |+ +-+..|..+.|+..+.+||+|.+.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 3457999999999999988765 22 123333433 344444433 43 2333455567776558999999777
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEecc-HHHHHHHHHHHhcCCceEE
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-VETINELESMVKGMQWEVR 765 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-~~~~~~~~~~~~~l~W~~~ 765 (796)
.+.. ..+|-++-|+|+|||++++... ......+..+.+...+++.
T Consensus 103 ~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 6643 5678999999999999999753 3455556666655555543
No 295
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.87 E-value=1.3e-06 Score=88.96 Aligned_cols=120 Identities=12% Similarity=0.098 Sum_probs=76.8
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc-----ccccccccccccCCCCccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG-----LFGIYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG-----lig~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
.-..|||+|||.|.++.+|..... -.|+-+|.. ..+..+-++- +--+..|+. .++.-+.+||+|.+.++|.
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASME-TATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG-GCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHH-HCCCCCCCeEEEEEcchhh
Confidence 456899999999999988876431 123333433 4455555442 211233443 2443347999999988877
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEeccH----------------HHHHHHHHHHhcCCceEEE
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRDDV----------------ETINELESMVKGMQWEVRM 766 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~----------------~~~~~~~~~~~~l~W~~~~ 766 (796)
.+.. -.+..+|-++-|+|||||+++|.+.. -....+..+++..-|++..
T Consensus 170 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 234 (254)
T 1xtp_A 170 YLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVK 234 (254)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEE
Confidence 6532 23567899999999999999997631 0235566666666666543
No 296
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.87 E-value=2e-06 Score=87.76 Aligned_cols=94 Identities=19% Similarity=0.246 Sum_probs=65.4
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
-..|||+|||.|.++..|... +. .|+-+|-. ..+..+-++ |+- -+..|+ +.++.-+.+||+|++.+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEG 122 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEES
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecC
Confidence 347999999999999888765 32 33333433 444444333 432 233444 44554358999999998
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+|... ....+|-++-|+|||||++++.+
T Consensus 123 ~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 123 AIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88765 47789999999999999999975
No 297
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.87 E-value=1.1e-05 Score=84.18 Aligned_cols=83 Identities=13% Similarity=0.073 Sum_probs=57.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC-C--eEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-G--VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~-~--V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP 448 (796)
..++.|.+.+.. .++.+|||||||+|.++. |... . |+++|+++.++..++..... ...+.+..+|+..++
T Consensus 8 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINP----QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCC----CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCC----CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchhhCC
Confidence 344555555542 356799999999999999 7653 6 99999999988766533221 123567778888877
Q ss_pred CCC-----CceeEEEEcC
Q 003776 449 FPG-----IVFDAVHCAR 461 (796)
Q Consensus 449 fpd-----~SFDlVvss~ 461 (796)
+++ +..|.|+++.
T Consensus 81 ~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHhhcccCCceEEEECC
Confidence 653 2357888875
No 298
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.86 E-value=3e-06 Score=87.54 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=66.0
Q ss_pred ccccccccCccccceeeeccCCCe-EEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typrtyDl~Ha~ 712 (796)
.-..|||+|||.|.++..|...+- -|.-| |-. ..+..+-+| |+- -+..|+ +.++.-+.+||+|++.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~ 121 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGL---DFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSE 121 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEE---eCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEc
Confidence 346799999999999999988732 33333 332 444444433 432 123344 3444335799999999
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++|... ....+|-++-|+|||||++++.+
T Consensus 122 ~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 122 GAIYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SCGGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 888765 46788999999999999999964
No 299
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.85 E-value=2.7e-05 Score=82.62 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=60.0
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC--C----eEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--G----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE 445 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~--~----V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e 445 (796)
.+++.|.+.+.. .++.+|||||||+|.++..|+++ . |+++|+++.++..++.. + ...+.+..+|+.
T Consensus 29 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~~D~~ 100 (279)
T 3uzu_A 29 GVIDAIVAAIRP----ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEESCGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEECChh
Confidence 445556665543 35789999999999999999874 5 99999999999888755 2 334677888888
Q ss_pred CCCCCCC------ceeEEEEcC
Q 003776 446 RLPFPGI------VFDAVHCAR 461 (796)
Q Consensus 446 ~LPfpd~------SFDlVvss~ 461 (796)
.+++++- ....|+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 101 TFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GCCGGGGSCSSSSCCEEEEEEC
T ss_pred cCChhHhcccccCCceEEEEcc
Confidence 8877532 234677764
No 300
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.85 E-value=3.8e-06 Score=85.49 Aligned_cols=96 Identities=19% Similarity=0.325 Sum_probs=65.6
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc--cc-cccccccccCCCCccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL--FG-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl--ig-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.-..|||+|||.|.++.+|....- .|+-+|.. ..+..+-+ +|+ +- +..|. +.++.-+.+||+|++.++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEESC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECCc
Confidence 345799999999999988876532 34444443 34444333 243 22 22333 445543589999999888
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+..+. ....+|-++-|+|||||++++.+
T Consensus 97 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 AHHFS---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcc---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 77664 46788999999999999999963
No 301
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.85 E-value=1.6e-05 Score=84.94 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=74.4
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh--ccccc----ccccc-cccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER--GLFGI----YHDWC-ESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR--Glig~----~~~~c-e~f~typrtyDl~Ha~~~~s 716 (796)
+.|||+|||+|+|+..|...+. -.|+-+|-. .+|...+.+ .++.+ +.... +.++ ..+||++-++..|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~--~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFT--EGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCT--TCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCC--CCCCCEEEEEeeHh
Confidence 5799999999999988876642 123333443 667664432 11110 11111 2233 14599999888776
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEe---------c-------------cHHHHHHHHHHHhcCCceEEEe
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVR---------D-------------DVETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~r---------d-------------~~~~~~~~~~~~~~l~W~~~~~ 767 (796)
.+..+|-|+-|+|||||.+++- . ....+.++..++...-|.+...
T Consensus 163 ------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 163 ------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp ------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred ------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3577899999999999999873 1 1136777888888899987654
No 302
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.84 E-value=3.8e-06 Score=86.29 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=65.2
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---cccccccccccCCCCccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.-..|||+|||.|.++..|....- .|+-+|.. ..+..+-++ |+ --+..|.. .+|.-+.+||+|++..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRIA 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhhh
Confidence 456899999999999998876532 44445543 445544333 43 12233432 34432489999998887
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+-.+. ....+|-++-|+|||||++++.
T Consensus 113 l~~~~---d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 113 AHHFP---NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHhcC---CHHHHHHHHHHHcCCCCEEEEE
Confidence 76654 4567899999999999999996
No 303
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.84 E-value=4.2e-05 Score=79.68 Aligned_cols=106 Identities=12% Similarity=0.164 Sum_probs=69.4
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP 448 (796)
.+++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.. ....+.+..+|+..++
T Consensus 18 ~i~~~iv~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 18 GVLKKIAEELNI----EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCC
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCC
Confidence 455666666653 35789999999999999999875 699999999888766532 2334677888888888
Q ss_pred CCCC--ceeEEEEcCCCcccccchHHHHHHHHhh--cCCCcEEEEE
Q 003776 449 FPGI--VFDAVHCARCRVPWHIEGGKLLLELNRV--LRPGGFFIWS 490 (796)
Q Consensus 449 fpd~--SFDlVvss~~~l~w~~d~~~~L~Ei~RV--LKPGG~fv~s 490 (796)
+++. .| .|+++. +++...+ +|..+.+. .-+.+.+++.
T Consensus 90 ~~~~~~~~-~vv~Nl---Py~i~~~-il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 90 FCSLGKEL-KVVGNL---PYNVASL-IIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp GGGSCSSE-EEEEEC---CTTTHHH-HHHHHHHTGGGCSEEEEEEE
T ss_pred hhHccCCc-EEEEEC---chhccHH-HHHHHHhcCCCCceEEEEEe
Confidence 7642 34 666654 4554333 33333322 2344555543
No 304
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.84 E-value=3.1e-06 Score=86.34 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=65.5
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh------cccccccccccccCCCCcccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER------GLFGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR------Glig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
.-..|||+|||.|.++..|..... +|+-+|.. ..+..+-.+ ++--+..|+ +.++.-+.+||+|++.++|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCch
Confidence 346799999999999999987743 33344443 455555444 122233344 3344334799999988877
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.... ....+|-++-|+|||||++++.
T Consensus 115 ~~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 6554 3577899999999999999985
No 305
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.82 E-value=3.1e-06 Score=84.04 Aligned_cols=117 Identities=17% Similarity=0.149 Sum_probs=79.8
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh-cccccccccccccCCCCccccccccccccccccCC
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER-GLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKR 721 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR-Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~r 721 (796)
-..|||+|||.|.++..|..... .|+-+|.. ..+..+-.+ ++--+..+.. .++ .+.+||+|.+.++|..+. .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~-~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP-R 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC-H
Confidence 45799999999999999987744 34444443 455666555 4333334432 344 468999999888776543 2
Q ss_pred cchHHHHHhhcccccCCcEEEEeccH---------------HHHHHHHHHHhcCC-ceEEE
Q 003776 722 CNLVAVVAEVDRILRPEGKLIVRDDV---------------ETINELESMVKGMQ-WEVRM 766 (796)
Q Consensus 722 C~~~~~l~E~DRiLRP~G~~i~rd~~---------------~~~~~~~~~~~~l~-W~~~~ 766 (796)
-.+..+|-++-|+|+|||++++.... -....+..+++..- |++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 24567899999999999999986211 14566777777666 76654
No 306
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.82 E-value=8.8e-06 Score=86.11 Aligned_cols=134 Identities=13% Similarity=0.053 Sum_probs=85.8
Q ss_pred cccccccCccccceeeecc--CCCeEEEEeecCCCC-CChhHHHhh----cc---cc-cccccccccCCCCccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMK--DISVWVMNVISIDSP-DTLPIIYER----GL---FG-IYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~--~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig-~~~~~ce~f~typrtyDl~Ha~ 712 (796)
-..|||+|||.|.++.+|. ..+-. +|+-+|-. ..+..+-++ |+ |- +.+|... ++ ++.+||+|.+.
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~ 194 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSN 194 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEEC
Confidence 3569999999999999883 33221 23333333 444444333 33 21 2233333 33 35899999988
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEeccH---------------------------------------HHHHHH
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV---------------------------------------ETINEL 753 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~---------------------------------------~~~~~~ 753 (796)
+++..+...-....+|-++-|+|||||++++.+.. -....+
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 87776555444456899999999999999987511 136678
Q ss_pred HHHHhcCCceEEEeec--cCCceEEEEEec
Q 003776 754 ESMVKGMQWEVRMTYS--KDKEGLLCVEKS 781 (796)
Q Consensus 754 ~~~~~~l~W~~~~~~~--~~~e~~l~~~K~ 781 (796)
..+++.--+++..... ...-.+++++|+
T Consensus 275 ~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 8888888888765432 223457888875
No 307
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.81 E-value=3e-06 Score=88.49 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=67.8
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----ccc-------ccccccccccC---CCCcccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLF-------GIYHDWCESFS---TYPRTYD 707 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gli-------g~~~~~ce~f~---typrtyD 707 (796)
.-..|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ +.- -+..++. .++ ..+.+||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeE
Confidence 346799999999999999988754 55555654 556555443 111 1122332 222 2347999
Q ss_pred ccccc-cccccccC----CcchHHHHHhhcccccCCcEEEEec
Q 003776 708 LLHAD-HLFSKIKK----RCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 708 l~Ha~-~~~s~~~~----rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+|++. .+|..+.. .-....+|-++-|+|||||++++..
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99987 67765554 3446788999999999999999974
No 308
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.81 E-value=6.5e-06 Score=85.65 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=64.7
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh--cccccccccccccCCCCcccccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER--GLFGIYHDWCESFSTYPRTYDLLHADHLFSKIK 719 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR--Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~~ 719 (796)
.-..|||+|||.|.|+..|.....- |+-+|.. ..+..+-++ ++--+..|.. .++ ++.+||+|++.++|....
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAE---VLGTDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCE---EEEEESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCe---EEEEECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhCc
Confidence 4467999999999999999874432 3333333 445555444 2222233432 344 478999999888776543
Q ss_pred CCcchHHHHHhhcccccCCcEEEEe
Q 003776 720 KRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 720 ~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
....+|-++-|+|||||++++.
T Consensus 132 ---d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 132 ---EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHhcCCCcEEEEE
Confidence 4567899999999999999985
No 309
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.81 E-value=0.00011 Score=87.32 Aligned_cols=102 Identities=16% Similarity=-0.009 Sum_probs=71.6
Q ss_pred CCCEEEEECCCCchhHHHHhh----------------------------------------------CCeEEEeCChhhH
Q 003776 389 RTRVVLDVGCGVASFGGFLFD----------------------------------------------RGVLTMSFAPKDE 422 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~----------------------------------------------~~V~gvDiSp~dl 422 (796)
++.+|||.+||+|.++..++. ..|+|+|+++.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 467899999999998765542 2699999999999
Q ss_pred HHHHHHHHHHcCCC--eEEEEcCCCCC--CCCCCceeEEEEcCCCcc-c--ccchHH---HHHHHHhhcCCCcEEEEEe
Q 003776 423 HEAQVQFALERGIP--AISAVMGTERL--PFPGIVFDAVHCARCRVP-W--HIEGGK---LLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 423 ~~A~~q~A~ergl~--~~~~v~d~e~L--Pfpd~SFDlVvss~~~l~-w--~~d~~~---~L~Ei~RVLKPGG~fv~s~ 491 (796)
..|+ ..+...|+. +.+...|...+ |+..+.||+|+++..+-. . ..+... .|.++.+.+.|||.+++.+
T Consensus 270 ~~A~-~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 270 QRAR-TNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHH-HHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHH-HHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 8887 566677876 57777887666 444458999999853211 0 112233 3445556667899888653
No 310
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.80 E-value=5e-06 Score=88.17 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=64.8
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----cccccccccccccCCCCcccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GLFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Glig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
-..|||+|||.|.++..|... +. .|+-+|-. ..+..+-++ |+-....-.+..+..+|.+||+|.+.++|..
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 347999999999999888765 43 33333433 455555544 4422122122233334689999999888765
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
... -....+|-++-|+|+|||.+++.
T Consensus 168 ~~~-~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 168 FGH-ENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp TCG-GGHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 432 24567899999999999999985
No 311
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.80 E-value=2.1e-06 Score=87.58 Aligned_cols=94 Identities=13% Similarity=0.131 Sum_probs=62.1
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc---cc-cccccccccCCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL---FG-IYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl---ig-~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
-..|||+|||.|.++.+|... +. .|+-+|.. ..+..+-+ .|+ |- +..|+. .++. +.+||+|++.+
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVG 111 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECC
Confidence 457999999999998888653 32 22333332 34444333 343 11 233443 3343 78999999877
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++-.+. ....+|-++-|+|||||++++.+
T Consensus 112 ~~~~~~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIAG---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGTS---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhcC---CHHHHHHHHHHHcCCCeEEEEec
Confidence 765443 35778999999999999999964
No 312
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.79 E-value=4.4e-06 Score=82.98 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=65.4
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcccccccccccc-cCCCCccccccccccccccccC
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCES-FSTYPRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~-f~typrtyDl~Ha~~~~s~~~~ 720 (796)
.-.+|||+|||.|.++.+|...+. +|+-+|.. ..+..+-++..--+..|.... .+.-+.+||+|.+.++|..+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~- 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF- 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS-
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC-
Confidence 456899999999999999988763 44444443 444444444321122333321 222237999999988887654
Q ss_pred CcchHHHHHhhcccccCCcEEEEe
Q 003776 721 RCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 721 rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
....+|-++-|+|+|||++++.
T Consensus 108 --~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 108 --DPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp --CHHHHHHHTGGGEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEE
Confidence 3467899999999999999996
No 313
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.78 E-value=1e-05 Score=80.02 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=66.5
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcccc---cccccccccCCCCcccccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFG---IYHDWCESFSTYPRTYDLLHADHLFSKIK 719 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig---~~~~~ce~f~typrtyDl~Ha~~~~s~~~ 719 (796)
-..|||+|||.|.++.+|..... .|+-+|-. ..+..+-.+|+.. +..|....+ .+.+||+|.+.++|..+.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWT--PDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCC--CSSCEEEEEEESCGGGSC
T ss_pred CCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCC--CCCceeEEEEechhhcCC
Confidence 34899999999999999877643 33333433 4555665566322 223333332 257999999988877654
Q ss_pred CCcchHHHHHhhcccccCCcEEEEecc
Q 003776 720 KRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 720 ~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
. -.+..+|-++-|+|+|||++++.+.
T Consensus 122 ~-~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 122 D-DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp H-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred H-HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2 2356789999999999999998743
No 314
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.77 E-value=3.4e-06 Score=86.99 Aligned_cols=96 Identities=22% Similarity=0.296 Sum_probs=63.7
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----ccc---c-cccccccccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GLF---G-IYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gli---g-~~~~~ce~f~typrtyDl~Ha~ 712 (796)
.-..|||+|||.|.++..|... +. +|+-+|.. ..+..+-+| |+- - +..|... ++.-+.+||+|++.
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~ 136 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASFDAVWAL 136 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCccEEEEe
Confidence 3457999999999999888653 33 33333333 444444333 432 1 2233322 33324799999998
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++|....+ ...+|-++-|+|||||+++|.+
T Consensus 137 ~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHMPD---RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTSSC---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhCCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 88876543 4678999999999999999864
No 315
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.76 E-value=4.6e-06 Score=83.31 Aligned_cols=98 Identities=16% Similarity=0.264 Sum_probs=66.1
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-------cccc-cccccccCCCCccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-------FGIY-HDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-------ig~~-~~~ce~f~typrtyDl~H 710 (796)
-..|||+|||.|.++.+|..... +|+-+|-. ..+..+-++ |+ +-++ .|. ..++.-+.+||+|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAV 106 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEE
Confidence 45799999999999999987744 34444433 444444442 22 1121 222 23343357999999
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+..+|..+.+.-....+|-++-|+|||||++++.+
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 98888776554444578999999999999999964
No 316
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.76 E-value=6.7e-05 Score=86.70 Aligned_cols=116 Identities=18% Similarity=0.081 Sum_probs=78.1
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHh-------------------hCCeEEEeCChhhHHHHHHHHHH
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLF-------------------DRGVLTMSFAPKDEHEAQVQFAL 431 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La-------------------~~~V~gvDiSp~dl~~A~~q~A~ 431 (796)
...+++|.+.+.. . ..+|||.+||+|.|...++ ...++|+|+++.++..|+.....
T Consensus 231 ~~Vv~lmv~ll~p----~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l 305 (544)
T 3khk_A 231 KSIVTLIVEMLEP----Y-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI 305 (544)
T ss_dssp HHHHHHHHHHHCC----C-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----C-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH
Confidence 3455666666542 2 3499999999998877653 23689999999988888755443
Q ss_pred HcCCCeEE--EEcCCCCC-CCCCCceeEEEEcCCCcc--cccc--------------------------hHHHHHHHHhh
Q 003776 432 ERGIPAIS--AVMGTERL-PFPGIVFDAVHCARCRVP--WHIE--------------------------GGKLLLELNRV 480 (796)
Q Consensus 432 ergl~~~~--~v~d~e~L-Pfpd~SFDlVvss~~~l~--w~~d--------------------------~~~~L~Ei~RV 480 (796)
.|+...+ ...|.... .++...||+|+++..+.. |..+ .-.+|..+.+.
T Consensus 306 -~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~ 384 (544)
T 3khk_A 306 -RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYH 384 (544)
T ss_dssp -TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHT
T ss_pred -hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHH
Confidence 5554333 34454333 355678999999865432 2110 02578889999
Q ss_pred cCCCcEEEEEeC
Q 003776 481 LRPGGFFIWSAT 492 (796)
Q Consensus 481 LKPGG~fv~s~~ 492 (796)
|||||++++..+
T Consensus 385 Lk~gGr~aiVlP 396 (544)
T 3khk_A 385 LAPTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEEEE
T ss_pred hccCceEEEEec
Confidence 999999887754
No 317
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.75 E-value=6e-06 Score=86.53 Aligned_cols=73 Identities=14% Similarity=0.023 Sum_probs=53.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CeEEEeCCh-------hhHHHHHHHHHHHcCC--CeEEEEcCCCC-CC-CCC--Cc
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAP-------KDEHEAQVQFALERGI--PAISAVMGTER-LP-FPG--IV 453 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp-------~dl~~A~~q~A~ergl--~~~~~v~d~e~-LP-fpd--~S 453 (796)
++.+|||+|||+|.++..|+.. .|+++|+++ .++..++.. +...++ .+.+...+... ++ +++ ++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n-~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLN-PETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHS-HHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhH-HHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 4679999999999999999875 899999999 777666532 222232 25667777644 33 444 68
Q ss_pred eeEEEEcCC
Q 003776 454 FDAVHCARC 462 (796)
Q Consensus 454 FDlVvss~~ 462 (796)
||+|++...
T Consensus 162 fD~V~~dP~ 170 (258)
T 2r6z_A 162 PDIVYLDPM 170 (258)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999999863
No 318
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.75 E-value=7.4e-06 Score=81.15 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=63.1
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh--cccccccccccccCCCCccccccccccccccccC
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER--GLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR--Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~ 720 (796)
-.+|||+|||.|.++..| ... .|+-+|.. ..+..+-++ ++--+..|. +.++.-+.+||+|.+.++|....
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC-CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC-
Confidence 457999999999999888 320 33334443 445555554 222222233 33443347999999988877654
Q ss_pred CcchHHHHHhhcccccCCcEEEEec
Q 003776 721 RCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 721 rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
....+|-++-|+|||||.+++..
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEe
Confidence 46788999999999999999974
No 319
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.73 E-value=2.7e-05 Score=79.49 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=81.0
Q ss_pred ccccccccCccccceeeecc--CCCeEEEEeecCCCC-CChhHHH----hhcc--cccccccccccCC---CCccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMK--DISVWVMNVISIDSP-DTLPIIY----ERGL--FGIYHDWCESFST---YPRTYDLLH 710 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~--~~~vwvmnv~p~~~~-~~l~~i~----eRGl--ig~~~~~ce~f~t---yprtyDl~H 710 (796)
.-..|||+|||.|.++..|. ....- |+-+|.. ..+.++- ..|+ |-+++.=.+.++. ++.+||+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 34579999999999887776 33322 3333333 2333332 2354 3333322233432 257899999
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec---cHHHHHHHHHHHhcCCceEEEee---cc---CCceEEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD---DVETINELESMVKGMQWEVRMTY---SK---DKEGLLCVEKS 781 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd---~~~~~~~~~~~~~~l~W~~~~~~---~~---~~e~~l~~~K~ 781 (796)
+..+ ..+..++-++-|+|+|||++++-+ ..+.+..+...++...+...... .. ..-.+++++|.
T Consensus 147 ~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 147 ARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred Eecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEec
Confidence 7663 357788999999999999999864 33455666677777777764321 11 22346777776
Q ss_pred ccCC
Q 003776 782 MWRP 785 (796)
Q Consensus 782 ~w~~ 785 (796)
-..|
T Consensus 220 ~~~~ 223 (240)
T 1xdz_A 220 KNTP 223 (240)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 5443
No 320
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.72 E-value=0.00012 Score=84.69 Aligned_cols=120 Identities=14% Similarity=0.047 Sum_probs=80.5
Q ss_pred HHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-------CCeEEEeCChhhHHHHHHHHHHHcCCC---eEEEE
Q 003776 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-------RGVLTMSFAPKDEHEAQVQFALERGIP---AISAV 441 (796)
Q Consensus 372 ~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-------~~V~gvDiSp~dl~~A~~q~A~ergl~---~~~~v 441 (796)
..+++|.+.+........+.+|||.+||+|.|...+++ ..++|+|+++..+..|+.... -+|+. ..+..
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~-l~gi~~~~~~I~~ 282 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI-LHGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH-HTTCCGGGEEEEE
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH-HcCCCcCccceEe
Confidence 44566666554211123577999999999998776643 269999999988888775544 35652 35566
Q ss_pred cCCCCC--C-CCCCceeEEEEcCCCc-cccc------c---------------hHHHHHHHHhhcC-CCcEEEEEeC
Q 003776 442 MGTERL--P-FPGIVFDAVHCARCRV-PWHI------E---------------GGKLLLELNRVLR-PGGFFIWSAT 492 (796)
Q Consensus 442 ~d~e~L--P-fpd~SFDlVvss~~~l-~w~~------d---------------~~~~L~Ei~RVLK-PGG~fv~s~~ 492 (796)
.|.... | ++...||+|+++..+. .|.. + .-.++..+.+.|+ |||++++..+
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 665444 4 4567899999985432 2210 0 0237888999999 9999987754
No 321
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.72 E-value=6.9e-06 Score=84.18 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=63.6
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----c--cccccccccccCCCC-ccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----L--FGIYHDWCESFSTYP-RTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----l--ig~~~~~ce~f~typ-rtyDl~Ha~~~~s 716 (796)
..|||+|||.|.++.+|.+... -+|+-++.+ ..+..+-+++ + .=+..+|..-.+.+| .+||.|..+.+++
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 3599999999999999987643 234444544 5666655543 1 112344433333333 7899997666555
Q ss_pred ccc--CCcchHHHHHhhcccccCCcEEEEe
Q 003776 717 KIK--KRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 717 ~~~--~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
... ..-....+|-|+-|+|||||.|++-
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 433 2223467889999999999999874
No 322
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.71 E-value=7.2e-06 Score=82.68 Aligned_cols=116 Identities=18% Similarity=0.151 Sum_probs=78.3
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----ccccccccccccCCCCccccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----LFGIYHDWCESFSTYPRTYDLLHADHLFSKI 718 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----lig~~~~~ce~f~typrtyDl~Ha~~~~s~~ 718 (796)
-..|||+|||.|.++.+|..... .|+-+|-. ..+..+-+++ +--+..|. ..++.-+.+||+|.+.++|...
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDL-SSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBT-TBCSSCTTCEEEEEEESCTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcch-hcCCCCCCCccEEEEcChHhhc
Confidence 34799999999999999987754 33334433 5566666663 21122233 2344335899999998888765
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEeccH----------------------HHHHHHHHHHhcCCceEEE
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRDDV----------------------ETINELESMVKGMQWEVRM 766 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd~~----------------------~~~~~~~~~~~~l~W~~~~ 766 (796)
. ....+|-++-|+|||||+++|.+.. -....++.++...-+++..
T Consensus 130 ~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 130 E---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred c---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 3 3457899999999999999996310 1124577777777777654
No 323
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.71 E-value=8.9e-06 Score=84.01 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=62.2
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCCCChhHHHhh-cccccccccccccCCCCccccccccccccccccCC
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSPDTLPIIYER-GLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKR 721 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~~~l~~i~eR-Glig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~r 721 (796)
.-..|||+|||.|.++..|.+...-|.-|-+.. ..+..+-.+ .+--+..|+ +.++.-+.+||+||+.++|..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~--- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGLFVYAVEPSI--VMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHF--- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCH--HHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGC---
T ss_pred CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCH--HHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhc---
Confidence 456899999999999999987654333332211 222222222 222222333 3455445899999999988766
Q ss_pred cchHHHHHhhcccccCCcEEEEe
Q 003776 722 CNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 722 C~~~~~l~E~DRiLRP~G~~i~r 744 (796)
-....+|-++-|+|| ||++++-
T Consensus 108 ~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 108 SHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp SSHHHHHHHHHHHBC-SSCEEEE
T ss_pred cCHHHHHHHHHHHhC-CcEEEEE
Confidence 346788999999999 9988774
No 324
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.71 E-value=1.1e-05 Score=79.28 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=76.1
Q ss_pred ccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHH----hhc--ccccccccccccCC---CCcccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIY----ERG--LFGIYHDWCESFST---YPRTYDLLHA 711 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~----eRG--lig~~~~~ce~f~t---yprtyDl~Ha 711 (796)
.-..|||+|||.|.++.+|... ..-|.-|=... ..+..+- ..| +-=+..|+..+++. .+.+||+|.+
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSM--DALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 3457999999999999888765 32222222211 1222111 112 22233455555542 2378999998
Q ss_pred cccccccc-------------CCcc----------hHHHHHhhcccccCCcE-EEEeccHHHHHHHHHHHh--cCCceEE
Q 003776 712 DHLFSKIK-------------KRCN----------LVAVVAEVDRILRPEGK-LIVRDDVETINELESMVK--GMQWEVR 765 (796)
Q Consensus 712 ~~~~s~~~-------------~rC~----------~~~~l~E~DRiLRP~G~-~i~rd~~~~~~~~~~~~~--~l~W~~~ 765 (796)
+.-|.... .+.. +..+|-++-|+|+|||+ +++.-.......+..++. ...|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 64442211 0111 16778899999999999 776544444556666666 5556442
Q ss_pred --EeeccCCceEEEEEec
Q 003776 766 --MTYSKDKEGLLCVEKS 781 (796)
Q Consensus 766 --~~~~~~~e~~l~~~K~ 781 (796)
..+..+..++++++|.
T Consensus 188 ~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CEEECTTSCEEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEEc
Confidence 2344556788888874
No 325
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.71 E-value=9.6e-06 Score=85.33 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=62.7
Q ss_pred ccccccccCccccceeeecc---CCCeEEEEeecCCCC-CChhHHHhh-----cccc----cccccccccCCCC------
Q 003776 643 TVRNVMDMRSVYGGFAAAMK---DISVWVMNVISIDSP-DTLPIIYER-----GLFG----IYHDWCESFSTYP------ 703 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~---~~~vwvmnv~p~~~~-~~l~~i~eR-----Glig----~~~~~ce~f~typ------ 703 (796)
.-..|||+|||.|.++..|. ....-| +-+|-. ..+..+-++ |+.. +..|.. .++.-.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQI---IGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEE---EEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEE---EEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccC
Confidence 46789999999999999998 443333 333333 455555443 2211 123332 223212
Q ss_pred ccccccccccccccccCCcchHHHHHhhcccccCCcEEEE
Q 003776 704 RTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 704 rtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
.+||+|++..+|... ....+|-++-|+|||||++++
T Consensus 112 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 699999998877655 678899999999999999998
No 326
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.71 E-value=6.9e-06 Score=83.80 Aligned_cols=97 Identities=15% Similarity=0.203 Sum_probs=66.9
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----ccccccccccccCCCCcccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----LFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----lig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
.-..|||+|||.|.++.+|.....- +|+-+|-. ..+..+-++. +--+..|. +.++.-+.+||+|.+.++|..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhh
Confidence 3467999999999999999876431 33444443 4555555542 22223333 334433589999999988876
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+. ....+|-++-|+|||||++++..
T Consensus 121 ~~---~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 121 IA---SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hh---hHHHHHHHHHHHcCCCcEEEEEe
Confidence 63 36788999999999999999963
No 327
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.70 E-value=1.5e-05 Score=76.88 Aligned_cols=120 Identities=10% Similarity=0.119 Sum_probs=75.1
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCccccccccc-cccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHAD-HLFSKI 718 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha~-~~~s~~ 718 (796)
.-.+|||+|||.|.++..|..... +|+-++.. ..+..+-++. +--+..|... ++.-+.+||+|.+. .++...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 345799999999999999987643 33333433 3344443332 2112233332 23224789999987 555543
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEeccHH---HHHHHHHHHhcCCceEEEe
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRDDVE---TINELESMVKGMQWEVRMT 767 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~---~~~~~~~~~~~l~W~~~~~ 767 (796)
..=....+|-++-|+|+|||++++..... ....+..++....+++...
T Consensus 122 -~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 122 -AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred -ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence 12234678999999999999999953222 3566777777777776543
No 328
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.70 E-value=4.8e-06 Score=86.78 Aligned_cols=94 Identities=19% Similarity=0.166 Sum_probs=65.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---cc-cccccccccC-CCCccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---FG-IYHDWCESFS-TYPRTYDLLHADHL 714 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig-~~~~~ce~f~-typrtyDl~Ha~~~ 714 (796)
..|||+|||.|.++..|.....- |+-+|.. ..+..+-++ |+ +- +..|.. .++ ..+.+||+|.+.++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQ---VILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFHAV 145 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEESC
T ss_pred CEEEEeCCcchHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEECch
Confidence 47999999999999999877543 3333333 445444443 43 21 233443 333 34589999999988
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
|..+. ....+|-++-|+|||||+++|.+
T Consensus 146 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 146 LEWVA---DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhccc---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 87664 34678999999999999999864
No 329
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.70 E-value=3.6e-06 Score=85.86 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=66.8
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhhc-----ccccccccccccCCCCcccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYERG-----LFGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eRG-----lig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
.-..|||+|||.|.++..|... .. .|+-+|.. ..+..+-++. +--+..|... ++.-+.+||+|++.++|
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAI 130 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHH
Confidence 3457999999999999988765 33 33333433 4555555553 2223344433 33335899999998887
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
..+. .-....+|-++-|+|||||++++.+
T Consensus 131 ~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 131 LALS-LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcC-hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 7652 2345678999999999999999964
No 330
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.68 E-value=1.7e-05 Score=82.27 Aligned_cols=112 Identities=16% Similarity=0.198 Sum_probs=75.0
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-cccc-cccccccCCCCcccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-FGIY-HDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig~~-~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
.+|||+|||.|.++.++..... .|+-+|-. ..+..+-++ |+ +-++ .|+...++ +..||+|.++.++.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~- 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAE- 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHH-
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHH-
Confidence 5799999999999888876543 44444443 445544443 43 2222 23444343 36899999765543
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEecc-HHHHHHHHHHHhcCCceEEEe
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRDD-VETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-~~~~~~~~~~~~~l~W~~~~~ 767 (796)
.+..++-++-|+|||||++++... ......+..+++...+++...
T Consensus 196 -----~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 196 -----LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp -----HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred -----HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 256789999999999999999743 235667778777777877544
No 331
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.67 E-value=1.8e-05 Score=77.87 Aligned_cols=112 Identities=13% Similarity=0.199 Sum_probs=71.6
Q ss_pred cccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-cccc-cccccccCCCCccccccccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-FGIY-HDWCESFSTYPRTYDLLHADHLFSKI 718 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig~~-~~~ce~f~typrtyDl~Ha~~~~s~~ 718 (796)
.|||+|||.|.++.+|..... +|+-+|.. ..+..+-++ |+ +-++ .|. ..++.-+.+||+|.+. |..+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hhcC
Confidence 799999999999999988754 45555554 445544444 32 2222 222 2333224799999973 2222
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEecc-----------------HHHHHHHHHHHhcCCceEEE
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRDD-----------------VETINELESMVKGMQWEVRM 766 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd~-----------------~~~~~~~~~~~~~l~W~~~~ 766 (796)
..-....+|-++-|+|+|||++++... .-....+..++. .|++..
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 223456789999999999999999621 113456677766 676654
No 332
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.67 E-value=4.1e-05 Score=75.06 Aligned_cols=135 Identities=15% Similarity=0.160 Sum_probs=79.8
Q ss_pred ccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhh----cc---cc-cccccccccC-CCCccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYER----GL---FG-IYHDWCESFS-TYPRTYDLLHAD 712 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig-~~~~~ce~f~-typrtyDl~Ha~ 712 (796)
.+|||+|||.|.++.+|... +-- .|+-+|.. ..+..+-++ |+ +- +..|. +.++ ..+.+||+|-++
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEEc
Confidence 37999999999999888764 211 34444443 444444333 33 22 22333 2333 345799999977
Q ss_pred cccccccCCc------chHHHHHhhcccccCCcEEEEec------cHHHHHHHHHHHhcCC---ceEEEeec----cCCc
Q 003776 713 HLFSKIKKRC------NLVAVVAEVDRILRPEGKLIVRD------DVETINELESMVKGMQ---WEVRMTYS----KDKE 773 (796)
Q Consensus 713 ~~~s~~~~rC------~~~~~l~E~DRiLRP~G~~i~rd------~~~~~~~~~~~~~~l~---W~~~~~~~----~~~e 773 (796)
..|-....+. ....+|-++-|+|||||++++.. .......+..++..+. |.+..... ....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp 180 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPP 180 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCC
Confidence 6551111111 22358999999999999999863 2234556667776554 87765421 2234
Q ss_pred eEEEEEecc
Q 003776 774 GLLCVEKSM 782 (796)
Q Consensus 774 ~~l~~~K~~ 782 (796)
.++|.+|.+
T Consensus 181 ~~~~~~~~~ 189 (197)
T 3eey_A 181 ILVCIEKIS 189 (197)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 566666653
No 333
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.65 E-value=1.4e-05 Score=80.16 Aligned_cols=90 Identities=21% Similarity=0.265 Sum_probs=64.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcccccccccccccCCCCccccccccccccccccCCc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKRC 722 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~rC 722 (796)
-..|||+|||.|.++..|... +-+|.. ..+..+-++++--+..|. +.++.-+.+||+|.+.++|....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~--- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD--- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS---
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc---
Confidence 468999999999999999876 222322 455566666543233333 33443347999999988876553
Q ss_pred chHHHHHhhcccccCCcEEEEe
Q 003776 723 NLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 723 ~~~~~l~E~DRiLRP~G~~i~r 744 (796)
....+|-++-|+|+|||++++.
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEE
Confidence 3567899999999999999996
No 334
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.65 E-value=8.3e-06 Score=82.83 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=60.5
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc------ccccccccccccCCC-Cccccccccc-ccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG------LFGIYHDWCESFSTY-PRTYDLLHAD-HLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG------lig~~~~~ce~f~ty-prtyDl~Ha~-~~~ 715 (796)
..|||+|||.|.++..|.....- .|+-+|.. ..+..+-++. +-=+..|+.+..+.+ +.+||+|.++ ..+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 46999999999999999775432 44445554 5555555443 111223333321222 4799999873 221
Q ss_pred cc-ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SK-IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~-~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.. ....-....+|-|+-|+|||||++++-+
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 11 1111223467999999999999999864
No 335
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.65 E-value=1.1e-05 Score=84.53 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=63.8
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----c--ccccccccccccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----G--LFGIYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----G--lig~~~~~ce~f~typrtyDl~Ha~ 712 (796)
.-.+|||+|||.|.++..|.+. ..-|.-| |-. ..+..+-++ | +-=+..|.. .++ ++.+||+||+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~ 96 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGI---DSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICH 96 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEE---ESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEEC
Confidence 4567999999999999999875 2222222 222 333333332 2 111233443 344 37899999999
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
.++..+. ....+|-++-|+|||||++++.+.
T Consensus 97 ~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 97 AFLLHMT---TPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp SCGGGCS---SHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ChhhcCC---CHHHHHHHHHHHcCCCCEEEEEec
Confidence 8877654 346789999999999999998643
No 336
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.64 E-value=4e-05 Score=77.39 Aligned_cols=117 Identities=16% Similarity=0.158 Sum_probs=78.6
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCcccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
..|||+|||.|.++.+|.....- |+-+|.. ..+..+-++ |+. =+..|+.. ++ .+.+||+|.+..+|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERF---VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEE---EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCCe---EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 48999999999999999876543 4444443 444444333 221 12334433 22 24689999988877
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEeccH-----------HHHHHHHHHHhcCCceEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV-----------ETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-----------~~~~~~~~~~~~l~W~~~~~ 767 (796)
..+. .-....+|-++-|+|+|||++++.+.. -....+..++...-|++...
T Consensus 143 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 6553 335667899999999999999984221 13567888888888887643
No 337
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.62 E-value=9.1e-06 Score=84.01 Aligned_cols=95 Identities=13% Similarity=0.263 Sum_probs=63.4
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhh----cc--cc-cccccccccCCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYER----GL--FG-IYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eR----Gl--ig-~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
-..|||+|||.|.++..|... ..-|.-| |.. ..+..+-++ |+ +- +..|.. .++.-+.+||+|++..
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCF 113 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEec
Confidence 457999999999999988765 3333333 332 344444333 33 11 222332 3443358999999988
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+|..+.. ...+|-++-|+|||||++++.+
T Consensus 114 ~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 114 VLEHLQS---PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 8876643 4578999999999999999964
No 338
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.62 E-value=3.2e-05 Score=75.00 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=69.1
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc--cccccccccccCCC-Cccccccccc-ccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL--FGIYHDWCESFSTY-PRTYDLLHAD-HLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl--ig~~~~~ce~f~ty-prtyDl~Ha~-~~~ 715 (796)
..|||+|||.|.++..|..... .|+-+|-. ..+..+-+ .|+ +-++++-.+.++.| +.+||+|.++ +.+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4699999999999999988733 33333433 34443333 344 33444434444323 5789999654 222
Q ss_pred cccc-----CCcchHHHHHhhcccccCCcEEEEecc------HHHHHHHHHHHhcCC---ceEEE
Q 003776 716 SKIK-----KRCNLVAVVAEVDRILRPEGKLIVRDD------VETINELESMVKGMQ---WEVRM 766 (796)
Q Consensus 716 s~~~-----~rC~~~~~l~E~DRiLRP~G~~i~rd~------~~~~~~~~~~~~~l~---W~~~~ 766 (796)
..-. ..-....+|-++-|+|||||.+++..- ......+..++..+. |.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAML 165 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEE
Confidence 1100 011223568899999999999998522 234455666665554 66644
No 339
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.62 E-value=4.6e-06 Score=92.13 Aligned_cols=119 Identities=13% Similarity=0.212 Sum_probs=84.5
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhccccccccc----ccccCCCCcccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDW----CESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~----ce~f~typrtyDl~Ha~~~~s~ 717 (796)
.-..|||+|||.|.|+.+|..... +|+-+|-. ..+..+-++|+-.....+ .+.++.-+.+||+|.+.++|..
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 345799999999999999988755 45555555 677788888753322111 1222322489999999999987
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEeccH--------------------HHHHHHHHHHhcCCceEEEe
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRDDV--------------------ETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~--------------------~~~~~~~~~~~~l~W~~~~~ 767 (796)
+. ....+|-++-|+|+|||++++.... -....++.++...-+++...
T Consensus 184 ~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 184 IP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred cC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 75 5778899999999999999996321 02356788888777876543
No 340
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.62 E-value=1.2e-05 Score=81.05 Aligned_cols=97 Identities=14% Similarity=0.215 Sum_probs=65.5
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----ccccccccccccCCCCcccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----LFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----lig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
.-.+|||+|||.|.++..|...+.- .|+-+|.. ..+..+-++. +--+..|.. .++.-+.+||+|.+.++|..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLD-KLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hccCCCCCceEEEEeccccc
Confidence 3467999999999999999876431 22333333 4444554443 222223332 24433579999999888766
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+. ....+|-++-|+|||||++++..
T Consensus 120 ~~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 53 46788999999999999999975
No 341
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.62 E-value=9.8e-06 Score=81.63 Aligned_cols=94 Identities=17% Similarity=0.270 Sum_probs=64.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-cc-cccccccccCCCCcccccccccc-ccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-FG-IYHDWCESFSTYPRTYDLLHADH-LFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig-~~~~~ce~f~typrtyDl~Ha~~-~~s 716 (796)
..|||+|||.|.++..|... .+|+-+|.. ..+..+-++ |. +- +..|.. .++ ++.+||+|.+.. +|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcC-CCCCcCEEEEeCCchh
Confidence 67999999999999999876 245555544 445444443 21 11 222332 233 358999999765 666
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.+...-.+..+|-++-|+|+|||.+++.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5545556678899999999999999984
No 342
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.61 E-value=6.4e-05 Score=79.62 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=72.0
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAV 441 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v 441 (796)
|...+..-+..|.+.. .+ .++.+|||||||+|.|+.+++.. .|.++|+...+...+. .. ...+..+..+.
T Consensus 71 YrSRAAfKL~ei~eK~-~L---k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi-~~-~~~g~~ii~~~ 144 (282)
T 3gcz_A 71 AVSRGSAKLRWMEERG-YV---KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI-MR-TTLGWNLIRFK 144 (282)
T ss_dssp CSSTHHHHHHHHHHTT-SC---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CC-CBTTGGGEEEE
T ss_pred EecHHHHHHHHHHHhc-CC---CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc-cc-ccCCCceEEee
Confidence 3444444455555554 22 35679999999999999988754 5788888753211110 00 00122333344
Q ss_pred cCCCCCCCCCCceeEEEEcCCCccccc----ch---HHHHHHHHhhcCCC--cEEEEEeCC
Q 003776 442 MGTERLPFPGIVFDAVHCARCRVPWHI----EG---GKLLLELNRVLRPG--GFFIWSATP 493 (796)
Q Consensus 442 ~d~e~LPfpd~SFDlVvss~~~l~w~~----d~---~~~L~Ei~RVLKPG--G~fv~s~~~ 493 (796)
.+.....++...+|+|+|..+ .. .- |. ..+|.-+.++|+|| |.|++-+.-
T Consensus 145 ~~~dv~~l~~~~~DvVLSDmA-pn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 145 DKTDVFNMEVIPGDTLLCDIG-ES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSCCGGGSCCCCCSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCcchhhcCCCCcCEEEecCc-cC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 333333456788999999763 22 11 22 13466678999999 999987544
No 343
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.60 E-value=1.2e-05 Score=81.57 Aligned_cols=121 Identities=13% Similarity=0.221 Sum_probs=76.7
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcc------cc-cccccccccCCCCccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGL------FG-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGl------ig-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.-..|||+|||.|.++.+|..... ..|+-+|.. ..+..+-++.- +- +..|+ +.++.-+.+||+|.+..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcch
Confidence 356899999999999998876631 133333433 34444433320 11 22232 334433468999998887
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEeccH---------------HHHHHHHHHHhcCCceEEEe
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV---------------ETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~---------------~~~~~~~~~~~~l~W~~~~~ 767 (796)
|..+... .+..+|-++-|+|+|||++++.+.. .....+..++...-+++...
T Consensus 156 l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 156 IGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 7655321 2457899999999999999996531 13567777777777776543
No 344
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.59 E-value=2.3e-05 Score=77.49 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=74.3
Q ss_pred cccccccCccccceeeeccCCC--eEEEEeecCCCC-CChhHHHhh----cc--c-ccccccccccCCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDIS--VWVMNVISIDSP-DTLPIIYER----GL--F-GIYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~--vwvmnv~p~~~~-~~l~~i~eR----Gl--i-g~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
-.+|||+|||.|.++..|.... . .|+-+|.. ..+..+-++ |+ + -+..|..+.++. ...||+|-++.
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~ 116 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGG 116 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEECC
Confidence 3579999999999998887542 2 22233332 344444332 43 1 122344344332 25799998666
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEEE
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVRM 766 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~~ 766 (796)
.+. .+..+|-++-|+|||||.+++.. .......+..+++...|++..
T Consensus 117 ~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 117 SGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp CTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred CCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 543 57789999999999999999974 445677788888888886544
No 345
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.59 E-value=6.6e-06 Score=87.26 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=63.4
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--------------cccccccccc-----ccCCC
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--------------LFGIYHDWCE-----SFSTY 702 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--------------lig~~~~~ce-----~f~ty 702 (796)
.-..|||+|||.|.++..|...+.. .|+-+|.. ..+..+-+|- +--+..|... +|+.-
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 4567999999999999988865432 34444443 4444444431 1112223322 23322
Q ss_pred Cccccccccccccccc-cCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 703 PRTYDLLHADHLFSKI-KKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 703 prtyDl~Ha~~~~s~~-~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
+.+||+|.+..++... .+.-....+|-++-|+|+|||++++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 3589999987665432 2223456789999999999999999743
No 346
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.58 E-value=9.9e-06 Score=85.15 Aligned_cols=96 Identities=13% Similarity=0.278 Sum_probs=59.4
Q ss_pred ccccccCccccceeee----ccC--CCeEEEEeecCCCC-CChhHHHhh-----cccccccccc----cccC------CC
Q 003776 645 RNVMDMRSVYGGFAAA----MKD--ISVWVMNVISIDSP-DTLPIIYER-----GLFGIYHDWC----ESFS------TY 702 (796)
Q Consensus 645 RnvmDm~~g~g~faA~----l~~--~~vwvmnv~p~~~~-~~l~~i~eR-----Glig~~~~~c----e~f~------ty 702 (796)
..|||+|||.|.++.. |.. ..+-| .++-+|.. .-|..+-+| |+-.+-..|. +.++ .-
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 3699999999976543 222 23422 23444443 445544443 3322111111 2222 11
Q ss_pred CccccccccccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 703 PRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 703 prtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+.+||+|++..+|-.+. .....|-||-|+|||||+++|.
T Consensus 133 ~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEE
Confidence 48999999988887665 3677899999999999999984
No 347
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.58 E-value=7.6e-05 Score=87.85 Aligned_cols=95 Identities=15% Similarity=0.030 Sum_probs=65.3
Q ss_pred CCEEEEECCCCchhHHH----H--hh---------C--CeEEEeCChhhHHHHHHHHHHHcCC--CeEEEEcCCCCCCCC
Q 003776 390 TRVVLDVGCGVASFGGF----L--FD---------R--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFP 450 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~----L--a~---------~--~V~gvDiSp~dl~~A~~q~A~ergl--~~~~~v~d~e~LPfp 450 (796)
...|||||||+|.+... . ++ + .|++++.++..+...+...+ .+. .+.++..+++.+.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~--Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV--RTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH--HTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh--cCCCCeEEEEeCchhhcccc
Confidence 45899999999987532 1 12 2 89999999855544443333 333 366777788777653
Q ss_pred -----CCceeEEEEcCCCccccc---chHHHHHHHHhhcCCCcEEE
Q 003776 451 -----GIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFI 488 (796)
Q Consensus 451 -----d~SFDlVvss~~~l~w~~---d~~~~L~Ei~RVLKPGG~fv 488 (796)
...+|+|+|=. +.... -.+.+|.-+.|.|||||.++
T Consensus 488 ~~~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 47899999954 32221 23578888899999999987
No 348
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.57 E-value=1.5e-05 Score=82.15 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=65.0
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcc-cccccccccccCCCCccccccccccccccccC
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGL-FGIYHDWCESFSTYPRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGl-ig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~ 720 (796)
.-..|||+|||.|.++..|..... +|+-+|.. ..+..+-++.. .-+..|. +.++.-+.+||+|.+.+.+-.+..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHCCCCCCCEEEEEEcchhhhccc
Confidence 345799999999999999987753 34444443 45555555543 1112222 224432479999998765544432
Q ss_pred CcchHHHHHhhcccccCCcEEEEec
Q 003776 721 RCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 721 rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
. ...+|-++-|+|+|||.+++..
T Consensus 130 ~--~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 130 N--KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp C--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--HHHHHHHHHHHcCCCeEEEEEe
Confidence 2 6788999999999999999863
No 349
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.57 E-value=3.9e-05 Score=76.79 Aligned_cols=130 Identities=15% Similarity=0.130 Sum_probs=74.7
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHh----hcccc----cccccccccCCCC----ccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYE----RGLFG----IYHDWCESFSTYP----RTY 706 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~e----RGlig----~~~~~ce~f~typ----rty 706 (796)
.-.+|||+|||.|.++.+|... .. .|+-+|.. ..+..+-+ .|+-. +..|..+.++.++ .+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 4568999999999999988765 22 23333332 33333322 25422 2233334333322 569
Q ss_pred cccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHH----HHHHhcCCceEEEee--
Q 003776 707 DLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINEL----ESMVKGMQWEVRMTY-- 768 (796)
Q Consensus 707 Dl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~----~~~~~~l~W~~~~~~-- 768 (796)
|+|..+.... ....+|-++-|+|||||++++.+.. .....+ +.+...-+|...+..
T Consensus 135 D~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~ 208 (223)
T 3duw_A 135 DFIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV 208 (223)
T ss_dssp SEEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred CEEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc
Confidence 9998665422 2356788889999999999985322 112222 333344566665432
Q ss_pred -ccCCceEEEEEec
Q 003776 769 -SKDKEGLLCVEKS 781 (796)
Q Consensus 769 -~~~~e~~l~~~K~ 781 (796)
.++.+++++++|+
T Consensus 209 ~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 209 GSKGYDGFIMAVVK 222 (223)
T ss_dssp ETTEEEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 2335688888764
No 350
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.56 E-value=4e-05 Score=82.17 Aligned_cols=73 Identities=8% Similarity=0.070 Sum_probs=51.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCC--CC---CCceeEEE
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--FP---GIVFDAVH 458 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LP--fp---d~SFDlVv 458 (796)
.++.+|||+|||+|.++..|+++ .|+++|+++.++..|+... ...+..+.+...+...++ +. ..+||+|+
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~-~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKL-KEFSDRVSLFKVSYREADFLLKTLGIEKVDGIL 103 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-GGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEE
Confidence 35789999999999999998864 7999999999998887443 223334556666655554 11 14677777
Q ss_pred EcC
Q 003776 459 CAR 461 (796)
Q Consensus 459 ss~ 461 (796)
+..
T Consensus 104 ~D~ 106 (301)
T 1m6y_A 104 MDL 106 (301)
T ss_dssp EEC
T ss_pred EcC
Confidence 654
No 351
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.56 E-value=0.0002 Score=85.59 Aligned_cols=104 Identities=11% Similarity=-0.026 Sum_probs=68.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC-------CeEEEeCChhhHHHHHHHHHHH-----cCCCeEEEEc-CCCCC-CCCCCce
Q 003776 389 RTRVVLDVGCGVASFGGFLFDR-------GVLTMSFAPKDEHEAQVQFALE-----RGIPAISAVM-GTERL-PFPGIVF 454 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La~~-------~V~gvDiSp~dl~~A~~q~A~e-----rgl~~~~~v~-d~e~L-Pfpd~SF 454 (796)
.+.+|||.|||+|.++..++.+ .++|+|+++..+..|+.+.... .++....+.. +...+ +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4679999999999999887753 5899999998887774333221 2333222233 23222 2345789
Q ss_pred eEEEEcCCCcc-ccc--------------------------c-hHHHHHHHHhhcCCCcEEEEEeC
Q 003776 455 DAVHCARCRVP-WHI--------------------------E-GGKLLLELNRVLRPGGFFIWSAT 492 (796)
Q Consensus 455 DlVvss~~~l~-w~~--------------------------d-~~~~L~Ei~RVLKPGG~fv~s~~ 492 (796)
|+|+++..+.. +.. + ...++..+.+.|+|||++++..+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99999876432 111 0 12356779999999999998755
No 352
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.56 E-value=2.1e-05 Score=78.48 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=64.3
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----c--------ccccccccccccCCCCccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----G--------LFGIYHDWCESFSTYPRTYDL 708 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----G--------lig~~~~~ce~f~typrtyDl 708 (796)
.-..|||+|||.|.|+.+|... +.. +|+-+|-. ..+..+-++ | +-=+..|. ...+..+.+||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDA 105 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCE
Confidence 3458999999999999998764 211 23333333 444444443 1 11112232 122222368999
Q ss_pred cccccccccccCCcchHHHHHhhcccccCCcEEEEeccHH
Q 003776 709 LHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVE 748 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~ 748 (796)
|.+..+|..+ ..-.+..+|-++-|+|+|||++|+.....
T Consensus 106 v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 106 ATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred EeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 9998888765 33345678999999999999988865543
No 353
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.56 E-value=2.1e-05 Score=77.60 Aligned_cols=124 Identities=11% Similarity=0.138 Sum_probs=74.6
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc--ccc-ccccccccCCCCcccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL--FGI-YHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl--ig~-~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
..|||+|||.|.++.+|... |-. .|+-+|.. ..+.++-+ .|+ +-+ ..|+.. ++ .+.+||+|.+..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 47999999999998888643 211 23333332 33333322 244 222 233333 22 1368999996543
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHHhcCCceEEEe------eccCCceEEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVETINELESMVKGMQWEVRMT------YSKDKEGLLCVEKS 781 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~~~~------~~~~~e~~l~~~K~ 781 (796)
..+..+|-++-|+|+|||++++.........++.+.+ .|+.... +......++++.|.
T Consensus 142 ------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3467889999999999999999855555556666666 6775431 11233456666663
No 354
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.56 E-value=0.00011 Score=71.16 Aligned_cols=126 Identities=14% Similarity=0.132 Sum_probs=81.1
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcccccccccccccCCCCccccccccccccccccCC--
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKR-- 721 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~f~typrtyDl~Ha~~~~s~~~~r-- 721 (796)
..|||+|||.|.++.+|..+- .|+-+|-. ..+.. ...+--+..|..++++ +.+||+|-++..|-.....
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCcccc
Confidence 379999999999999998875 45544443 22322 2233334455555544 3899999987766542222
Q ss_pred ----cchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEEEe--eccCCceEEEEE
Q 003776 722 ----CNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVRMT--YSKDKEGLLCVE 779 (796)
Q Consensus 722 ----C~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~~~--~~~~~e~~l~~~ 779 (796)
.....++-++=|.| |||.+++.. .......+.++++...|+.... .....+.+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 97 IGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred ccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 22345667777777 999999864 3345677888888888887544 233455665554
No 355
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.55 E-value=1.3e-05 Score=87.99 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=63.7
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhh---------c-c----cc-ccccccccc------
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYER---------G-L----FG-IYHDWCESF------ 699 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eR---------G-l----ig-~~~~~ce~f------ 699 (796)
=..|||+|||.|.++..|... +-. .|+-+|-. ..+..+-++ | + +- +..|+.. +
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~-l~~~~~~ 160 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHG--KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN-LATAEPE 160 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTC--EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC-GGGCBSC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH-hhhcccC
Confidence 357999999999988887653 211 23333333 455555544 4 1 11 2234433 2
Q ss_pred CCCCccccccccccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 700 STYPRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 700 ~typrtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+..+.+||+|++..+|..+.. ...+|-++-|+|||||++++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN---KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCC---HHHHHHHHHHHcCCCCEEEEEE
Confidence 332479999999998876643 5688999999999999999963
No 356
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.55 E-value=1.8e-05 Score=82.45 Aligned_cols=117 Identities=17% Similarity=0.243 Sum_probs=74.6
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc-c-ccccccccccCCCCcccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL-F-GIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl-i-g~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
.-..|||+|||.|.++.+|..... +|+-+|.. ..+..+-+ .|+ + -+..|... ++. +.+||+|.+..+|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVF 194 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccch
Confidence 345799999999999999987754 34444443 33433332 343 1 12223322 232 6899999999888
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEecc--------------HHHHHHHHHHHhcCCceEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRDD--------------VETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~--------------~~~~~~~~~~~~~l~W~~~~~ 767 (796)
... ..-.+..+|-++-|+|+|||+++|-.. .-....++.+... |++...
T Consensus 195 ~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 195 MFL-NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GGS-CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 644 344566789999999999999777311 1123456666665 877553
No 357
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.54 E-value=4.2e-05 Score=77.84 Aligned_cols=129 Identities=15% Similarity=0.265 Sum_probs=77.4
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc---c-ccccccccccC-CCCcccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL---F-GIYHDWCESFS-TYPRTYDLLHA 711 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl---i-g~~~~~ce~f~-typrtyDl~Ha 711 (796)
.-++|||+|||.|.++.+|... + ...|+-+|.. ..+.++-+ .|+ | =+..|..+.++ ..+.+||+|.+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 4578999999999999998762 1 1233333333 33333322 343 1 12344445455 45689999985
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEecc-----------------HHHHHHHHH----HHhcCCceEEEeecc
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-----------------VETINELES----MVKGMQWEVRMTYSK 770 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-----------------~~~~~~~~~----~~~~l~W~~~~~~~~ 770 (796)
+.- .-.+..+|-++-|+|||||++|+.+. ......++. +...-+|...+. .
T Consensus 149 ~~~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p 220 (232)
T 3ntv_A 149 DAA------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFL--N 220 (232)
T ss_dssp ETT------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEE--C
T ss_pred cCc------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEE--E
Confidence 532 22356678899999999999999211 112223333 334556776554 2
Q ss_pred CCceEEEEEec
Q 003776 771 DKEGLLCVEKS 781 (796)
Q Consensus 771 ~~e~~l~~~K~ 781 (796)
-.+++++++|+
T Consensus 221 ~~dG~~i~~k~ 231 (232)
T 3ntv_A 221 IDDGLAISIKG 231 (232)
T ss_dssp STTCEEEEEEC
T ss_pred cCCceEEEEEC
Confidence 24678998884
No 358
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.54 E-value=4.1e-05 Score=77.26 Aligned_cols=92 Identities=16% Similarity=0.321 Sum_probs=54.0
Q ss_pred ccccccCccccceeeeccCC--CeEEEEeecCCCC-C----ChhHHHhh-cccccccccccc--cCCCCccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-D----TLPIIYER-GLFGIYHDWCES--FSTYPRTYDLLHADHL 714 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~----~l~~i~eR-Glig~~~~~ce~--f~typrtyDl~Ha~~~ 714 (796)
..|||+|||.|.++..|.+. .- .|+-+|-. . .+..+-.+ ++.-+..|...+ +..++.+||+|.++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~---~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEG---IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTS---EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcCCC---EEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 36999999999998876542 11 12223332 1 11222222 233344455443 123458999998762
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
...-....+|-|+-|+|||||.+++.
T Consensus 135 ----~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 ----AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 11112334588999999999999985
No 359
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.54 E-value=2.8e-05 Score=79.98 Aligned_cols=113 Identities=18% Similarity=0.243 Sum_probs=68.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc-cccc-----ccccc-cccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG-LFGI-----YHDWC-ESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG-lig~-----~~~~c-e~f~typrtyDl~Ha~~~~s 716 (796)
+.|||+|||+|+|+..|...... .|+-+|-. ..|..+..+. -++. +...+ ..++. .-||.+-++.+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 46999999999999988876531 33444443 5666555432 1111 11111 22322 0134444444444
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEe-------------------ccH---HHHHHHHHHHhcCCceEEEe
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVR-------------------DDV---ETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~r-------------------d~~---~~~~~~~~~~~~l~W~~~~~ 767 (796)
. +..+|-|+-|+|||||++++- |.. ..+.++..++...-|.+...
T Consensus 115 ~------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 115 S------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp C------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred h------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 3 367899999999999999874 111 24566778888888887654
No 360
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.53 E-value=3.1e-05 Score=76.16 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=72.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh-----cccccccccccccCCCCcccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER-----GLFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR-----Glig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
-..|||+|||.|.++..|.....- +|+-+|-. ..+..+-++ .+--+..|... ++.-+.+||+|.+.++|..
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchhh
Confidence 357999999999999988765321 23333332 333333333 12222334332 2322479999998887764
Q ss_pred ccC------------CcchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHH--hcCCceEEEe
Q 003776 718 IKK------------RCNLVAVVAEVDRILRPEGKLIVRDDVETINELESMV--KGMQWEVRMT 767 (796)
Q Consensus 718 ~~~------------rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~--~~l~W~~~~~ 767 (796)
... .-.+..+|-++-|+|||||.+++.+.... .....+. ....|.....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~ 182 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHA 182 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEE
Confidence 431 12456889999999999999999764321 1122333 4457876544
No 361
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.53 E-value=2.6e-05 Score=74.97 Aligned_cols=112 Identities=19% Similarity=0.225 Sum_probs=73.5
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc----cccccccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL----FGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl----ig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
-.+|||+|||.|.++..|...- ..|+-+|.. ..+..+-+ .|+ --+..|+.+.++.. ..||+|.+.+.
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCc
Confidence 4579999999999998887764 234444443 33443333 232 12234444444431 47999987766
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVR 765 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~ 765 (796)
+. .+..+|-++-|+|+|||++++.. .......+..+++...|++.
T Consensus 110 ~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 110 GG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp TT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred hH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceE
Confidence 53 35788999999999999999864 35566777777776666543
No 362
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.53 E-value=1.1e-05 Score=80.96 Aligned_cols=98 Identities=17% Similarity=0.148 Sum_probs=65.0
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCcccccccc-ccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHA-DHLFSKI 718 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha-~~~~s~~ 718 (796)
.-..|||+|||.|.++..|....- +|+-+|.. ..+..+-++. +--+..|.. .++. +.+||+|.+ .++|...
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-DFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-TCCC-SSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-Hccc-CCCCcEEEEcCchHhhc
Confidence 346799999999999998876522 34444443 4455555442 222223332 2343 689999994 4466555
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEec
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
...-.+..+|-++-|+|+|||++++.+
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 443456778999999999999999974
No 363
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.52 E-value=1.3e-05 Score=84.39 Aligned_cols=95 Identities=15% Similarity=0.207 Sum_probs=62.4
Q ss_pred cccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----c------ccccccccccccCCCCccccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----G------LFGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----G------lig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.|||+|||.|.++..|..... .|+-+|-. ..+..+-+| | +-=+..|.. .++. +.+||+|.+...
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCCC-SCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCCc-CCCcCEEEECCc
Confidence 799999999999999988753 34444443 445444443 1 112233433 3443 789999885433
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+-.+...-.+..+|-++-|+|||||+++|..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2223333346788999999999999999963
No 364
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.52 E-value=1.2e-05 Score=80.98 Aligned_cols=96 Identities=17% Similarity=0.264 Sum_probs=61.9
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhh-----cccccccccccccCCCCcccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYER-----GLFGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eR-----Glig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
-..|||+|||.|.++.+|... .. .|+-+|.. ..+..+-++ .+--+..|. +.++ ++.+||+|.+..+|
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY-SKYD-FEEKYDMVVSALSI 119 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCT-TTCC-CCSCEEEEEEESCG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCch-hccC-CCCCceEEEEeCcc
Confidence 367999999999999988765 22 22333332 444444444 122222333 2233 23899999998877
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
..+. .-....+|-++-|+|||||++++.+
T Consensus 120 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLE-DEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCC-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7652 2222357999999999999999965
No 365
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.52 E-value=6.7e-05 Score=77.03 Aligned_cols=115 Identities=13% Similarity=0.136 Sum_probs=67.3
Q ss_pred cccccccCccccceeeeccCC------CeEEEEeecCCCC-CChhHHHhhcccccccccccc--cCCCCc-ccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI------SVWVMNVISIDSP-DTLPIIYERGLFGIYHDWCES--FSTYPR-TYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~------~vwvmnv~p~~~~-~~l~~i~eRGlig~~~~~ce~--f~typr-tyDl~Ha~~ 713 (796)
-..|||+|||.|.+++.|... .--|..|=..... .... -+...+-=+..|..+. ++..+. .||+|+.+.
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 357999999999999988643 2233333332222 1111 0111122233454442 332233 699999654
Q ss_pred ccccccCCcchHHHHHhhcc-cccCCcEEEEeccHH-----HHHHHHHHHhcC--CceEE
Q 003776 714 LFSKIKKRCNLVAVVAEVDR-ILRPEGKLIVRDDVE-----TINELESMVKGM--QWEVR 765 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DR-iLRP~G~~i~rd~~~-----~~~~~~~~~~~l--~W~~~ 765 (796)
. + -.+..+|.++-| +|||||++++.|... ....+..+++.. ++.+.
T Consensus 161 ~-----~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 161 A-----H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp S-----C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred c-----h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 3 1 256778999998 999999999976311 123667777766 56653
No 366
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.52 E-value=1.7e-05 Score=83.03 Aligned_cols=81 Identities=14% Similarity=0.196 Sum_probs=53.2
Q ss_pred ccccccccccccccccCC-cchHHHHHhhcccccCCcEEEEeccH----------------HHHHHHHHHHhcCCceEEE
Q 003776 704 RTYDLLHADHLFSKIKKR-CNLVAVVAEVDRILRPEGKLIVRDDV----------------ETINELESMVKGMQWEVRM 766 (796)
Q Consensus 704 rtyDl~Ha~~~~s~~~~r-C~~~~~l~E~DRiLRP~G~~i~rd~~----------------~~~~~~~~~~~~l~W~~~~ 766 (796)
.+||+|-+..+|...... -....+|-+|-|+|||||+|++.+.. -....+..++..--+++..
T Consensus 173 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 173 LPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp SSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred CCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 679999988887664433 24678899999999999999985211 1356677777666666543
Q ss_pred ee------------ccCCceEEEEEecccC
Q 003776 767 TY------------SKDKEGLLCVEKSMWR 784 (796)
Q Consensus 767 ~~------------~~~~e~~l~~~K~~w~ 784 (796)
.. .+...-++++.|+-|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (289)
T 2g72_A 253 LRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 282 (289)
T ss_dssp EEEEECCGGGCCTTBCCCEEEEEEEEECC-
T ss_pred eeEeeccccccccccCcceEEEEEEecccc
Confidence 21 0112356677776663
No 367
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.52 E-value=6.8e-05 Score=83.75 Aligned_cols=106 Identities=13% Similarity=-0.013 Sum_probs=69.3
Q ss_pred CCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHc--CC-CeEEEEcCCCC-CCC-CCCceeEEEEcCC
Q 003776 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALER--GI-PAISAVMGTER-LPF-PGIVFDAVHCARC 462 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~er--gl-~~~~~v~d~e~-LPf-pd~SFDlVvss~~ 462 (796)
+.+|||+|||+|.++..|+.. .|+++|+++.++..++... ... |+ .+.+...|... |+. ++++||+|++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~-~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNI-PLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhH-HHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 689999999999999999875 7999999999998887444 444 55 35667777654 342 3458999999642
Q ss_pred C-------cccccchHHHHHHHHhhcC-CCcEEEEEeCCCCC
Q 003776 463 R-------VPWHIEGGKLLLELNRVLR-PGGFFIWSATPVYQ 496 (796)
Q Consensus 463 ~-------l~w~~d~~~~L~Ei~RVLK-PGG~fv~s~~~~~~ 496 (796)
+ +....+..--+.++.++|+ .+..+++-..|+.+
T Consensus 173 rr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~ld 214 (410)
T 3ll7_A 173 RRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMID 214 (410)
T ss_dssp EC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTSC
T ss_pred CcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCCC
Confidence 1 1111122233455555443 34556666555554
No 368
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.52 E-value=2e-05 Score=77.67 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=60.2
Q ss_pred cccccccCccccceee-eccCCCeEEEEeecCCCC-CChhHHHhh----cc-cc-cccccccccCCCCcccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAA-AMKDISVWVMNVISIDSP-DTLPIIYER----GL-FG-IYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 644 iRnvmDm~~g~g~faA-~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig-~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
-..|||+|||.|.+++ .|..... .|+-+|.. ..+..+-++ |. +- +..|.. .++.-+.+||+|.+.+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChH
Confidence 3579999999999854 4433333 33334433 333333332 31 11 222332 344324799999988777
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
..+. .-....+|-++-|+|+|||++++.+
T Consensus 100 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 100 FHMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 6542 2346678999999999999999864
No 369
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.51 E-value=6.3e-05 Score=80.89 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=85.9
Q ss_pred ccccc-cccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHh----hcc----cccccccccccCCCCcccc
Q 003776 639 INWST-VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYE----RGL----FGIYHDWCESFSTYPRTYD 707 (796)
Q Consensus 639 i~w~~-iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~e----RGl----ig~~~~~ce~f~typrtyD 707 (796)
+.|.. .+.|||+|||.|.++.+|... .+-+..+ |-+..+..+-+ .|+ --+-+|....-+..|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIW---DLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE---ECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 35566 889999999999999888653 2322222 22334443332 243 2234454443222567899
Q ss_pred ccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH----------H-----------------HHHHHHHHHhcC
Q 003776 708 LLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV----------E-----------------TINELESMVKGM 760 (796)
Q Consensus 708 l~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~----------~-----------------~~~~~~~~~~~l 760 (796)
+|.+.++|..|... ....+|-++-|+|+|||+++|-+.. . ....++.+++.-
T Consensus 251 ~v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (352)
T 3mcz_A 251 VVMLNDCLHYFDAR-EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDA 329 (352)
T ss_dssp EEEEESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHT
T ss_pred EEEEecccccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHC
Confidence 99999988776432 2356899999999999999985410 0 123355566555
Q ss_pred CceEEEeeccCCceEEEEEec
Q 003776 761 QWEVRMTYSKDKEGLLCVEKS 781 (796)
Q Consensus 761 ~W~~~~~~~~~~e~~l~~~K~ 781 (796)
-+++.-. ..+...+++++|+
T Consensus 330 Gf~~~~~-~~g~~~l~~a~kp 349 (352)
T 3mcz_A 330 GLAVGER-SIGRYTLLIGQRS 349 (352)
T ss_dssp TCEEEEE-EETTEEEEEEECC
T ss_pred CCceeee-ccCceEEEEEecC
Confidence 6665432 2344568888885
No 370
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.51 E-value=1.6e-05 Score=81.05 Aligned_cols=95 Identities=24% Similarity=0.204 Sum_probs=63.4
Q ss_pred ccccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCcccccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
.-.+|||+|||.|.++..|... .. .|+-+|.. ..+..+-++. +--+..|. +.++ .+.+||+|++.++|..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhh
Confidence 3457999999999999888654 22 12222322 4455555542 21122333 3344 4689999999887765
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.. ....+|-++-|+|||||++++..
T Consensus 108 ~~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 VP---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ST---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred CC---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 53 46778999999999999999963
No 371
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=4.2e-05 Score=73.10 Aligned_cols=109 Identities=11% Similarity=0.158 Sum_probs=75.7
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---cccccccccccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
.+|||+|||.|.++..|.....- |+-+|.. ..+..+.++ |+ --+..|+.++++. .+||+|.+..+
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~-- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCKF---VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT-- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSSE---EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC--
T ss_pred CEEEEeCCCCCHHHHHHHhcCCe---EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc--
Confidence 47999999999999999874322 3333332 334433333 33 2233455555553 68999997776
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEEEe
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~~~ 767 (796)
..+..+|-++-|+ |||++++.. ....+..+..+++...|++...
T Consensus 110 -----~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -----KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -----SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -----ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 4567888899998 999999986 5667778888888888887764
No 372
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.51 E-value=4.1e-05 Score=76.99 Aligned_cols=129 Identities=15% Similarity=0.160 Sum_probs=75.0
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHh----hcccc----cccccccccCCCC-----cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYE----RGLFG----IYHDWCESFSTYP-----RT 705 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~e----RGlig----~~~~~ce~f~typ-----rt 705 (796)
.-++|||+|||.|.++.+|... ..- |+-+|.. ..+.++-+ .|+-. +..|..+.++.++ .+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGAR---LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCE---EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCE---EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 4678999999999999888763 222 2223332 33333322 24421 2345445556555 68
Q ss_pred ccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc-----HHHHHHHHHHHhcCCceEEEee-----ccCCceE
Q 003776 706 YDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-----VETINELESMVKGMQWEVRMTY-----SKDKEGL 775 (796)
Q Consensus 706 yDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-----~~~~~~~~~~~~~l~W~~~~~~-----~~~~e~~ 775 (796)
||+|.+++....+. ....++.++ |+|||||++++.+- ..++..++ ..-+|...... ....+++
T Consensus 135 fD~V~~d~~~~~~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~dG~ 207 (221)
T 3u81_A 135 LDMVFLDHWKDRYL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVDGL 207 (221)
T ss_dssp CSEEEECSCGGGHH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEEEE
T ss_pred eEEEEEcCCcccch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCCce
Confidence 99998766443321 122456667 99999999998643 23333333 34456655432 1124578
Q ss_pred EEEEec
Q 003776 776 LCVEKS 781 (796)
Q Consensus 776 l~~~K~ 781 (796)
.++.++
T Consensus 208 ~~~~~~ 213 (221)
T 3u81_A 208 EKAIYQ 213 (221)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 887764
No 373
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.50 E-value=1.3e-05 Score=83.30 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=62.7
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---ccc-ccccccccCC-CCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---FGI-YHDWCESFST-YPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~-~~~~ce~f~t-yprtyDl~Ha~~ 713 (796)
-..|||+|||.|.++..|...+.. +|+-+|-. ..+..+-++ |+ |-+ ..|.. .++. -+.+||+|.+.+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY-GRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT-TSCCCCSSCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcc-ccccCCCCCcCEEEECc
Confidence 357999999999999888765431 23333433 344444333 22 222 22332 2232 257999999887
Q ss_pred ccccc-cCCcchHHHHHhhcccccCCcEEEEec
Q 003776 714 LFSKI-KKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 714 ~~s~~-~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+|... .+.-....+|-++-|+|||||++++..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 76431 233345678999999999999999974
No 374
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.48 E-value=0.0001 Score=76.04 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=79.0
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc---cc-cccccccccCCC-Ccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL---FG-IYHDWCESFSTY-PRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl---ig-~~~~~ce~f~ty-prtyDl~Ha~~ 713 (796)
-..|||+|||.|.++..|..+.-. .|+-+|-. ..+..+-+ .|+ |- +..|..+..+.+ +.+||+|-++-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 347999999999999988876432 45555543 33333322 243 22 233444433333 47999999875
Q ss_pred ccccc-----------------cCCcchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHHhcCCceEEE
Q 003776 714 LFSKI-----------------KKRCNLVAVVAEVDRILRPEGKLIVRDDVETINELESMVKGMQWEVRM 766 (796)
Q Consensus 714 ~~s~~-----------------~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~~~ 766 (796)
-|... ...+.+..+|-++-|+|||||.+++--....+..+..+++...|....
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 44221 112567789999999999999999976666777788888888887653
No 375
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.48 E-value=0.00012 Score=75.43 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=78.2
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCc--cccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPR--TYDL 708 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typr--tyDl 708 (796)
.-++|||+|||.|.++.+|... ..- |+-+|-. ..+..+-++ |+- =+..|..+.++..+. +||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQ---LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCE---EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 4578999999999999988765 222 2223332 344443333 442 123455444555444 8999
Q ss_pred cccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHH----HHHHhcCCceEEEee---c
Q 003776 709 LHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINEL----ESMVKGMQWEVRMTY---S 769 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~----~~~~~~l~W~~~~~~---~ 769 (796)
|.++.- .-....+|-++-|+|||||++|+.+.. .....+ +.|...-+|...+.. .
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~ 213 (248)
T 3tfw_A 140 IFIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGT 213 (248)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECST
T ss_pred EEECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCC
Confidence 986542 112345788888999999999985322 112223 333455577765431 1
Q ss_pred cCCceEEEEEec
Q 003776 770 KDKEGLLCVEKS 781 (796)
Q Consensus 770 ~~~e~~l~~~K~ 781 (796)
...+++++++|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 335789999986
No 376
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.48 E-value=4.2e-05 Score=79.31 Aligned_cols=162 Identities=15% Similarity=0.147 Sum_probs=88.3
Q ss_pred hhhHHHHHHhhcccccceeeeccc------------c----cccccccccccCccccceeeeccCC-CeEEEEeecCCCC
Q 003776 615 PEDFTADYEHWKRVVSKSYLNGMG------------I----NWSTVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP 677 (796)
Q Consensus 615 ~e~F~eD~e~Wk~rV~~tY~~~lg------------i----~w~~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~ 677 (796)
.+.|.+-...|.++++.+|+.... + .-..-..|||+|||.|.++..|... |-+ .|+-+|..
T Consensus 36 ~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~--~v~~vD~s 113 (249)
T 3g89_A 36 FSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPEL--ELVLVDAT 113 (249)
T ss_dssp HHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTTC--EEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCCC--EEEEEECC
Confidence 455666667777766654432211 0 0123357999999999988776532 211 22333333
Q ss_pred -CChhHH----Hhhcc--cccccccccccC---CCCccccccccccccccccCCcchHHHHHhhcccccCCcEEEEec--
Q 003776 678 -DTLPII----YERGL--FGIYHDWCESFS---TYPRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-- 745 (796)
Q Consensus 678 -~~l~~i----~eRGl--ig~~~~~ce~f~---typrtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-- 745 (796)
..+.++ -.-|+ |-++|.--+.++ .++.+||+|-+..+ ..+..++-++-|+|+|||++++-.
T Consensus 114 ~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 114 RKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 333333 22355 334443334444 24479999986543 346788889999999999988743
Q ss_pred -cHHHHHHHHHHHhcCCceEEEee---c--cCCc-eEEEEEecccCC
Q 003776 746 -DVETINELESMVKGMQWEVRMTY---S--KDKE-GLLCVEKSMWRP 785 (796)
Q Consensus 746 -~~~~~~~~~~~~~~l~W~~~~~~---~--~~~e-~~l~~~K~~w~~ 785 (796)
..+.+..+...++.+.|...-.. . .+.+ .+++.+|.-.+|
T Consensus 187 ~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 187 RVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp CCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 34566667777777777764321 1 1223 456667755544
No 377
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.48 E-value=7.2e-05 Score=75.11 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=75.0
Q ss_pred cccccccCcc-ccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc-ccc-ccccccccCCC-Cccccccccccc
Q 003776 644 VRNVMDMRSV-YGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL-FGI-YHDWCESFSTY-PRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g-~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl-ig~-~~~~ce~f~ty-prtyDl~Ha~~~ 714 (796)
=..|||+||| .|.++..|.... .-.|+-+|-. ..+..+-+ .|+ +-+ ..|+. .+..+ +.+||+|-++-.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-IIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-SSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-hhhhcccCceeEEEECCC
Confidence 3579999999 999988887652 1233333433 33333322 243 222 22321 13233 379999998755
Q ss_pred ccccc----------------CCcchHHHHHhhcccccCCcEEEEe--ccHHHHHHHHHHHhcCCceEEEe
Q 003776 715 FSKIK----------------KRCNLVAVVAEVDRILRPEGKLIVR--DDVETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 715 ~s~~~----------------~rC~~~~~l~E~DRiLRP~G~~i~r--d~~~~~~~~~~~~~~l~W~~~~~ 767 (796)
|.... ....+..+|-++-|+|+|||++++- ........+.++++...|.+...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEE
Confidence 43221 1122467899999999999999983 44466788888888888887654
No 378
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.48 E-value=1.7e-05 Score=84.11 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=63.8
Q ss_pred cccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hccc---c-cccccccccCCCCcccccccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGLF---G-IYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGli---g-~~~~~ce~f~typrtyDl~Ha 711 (796)
..-..|||+|||.|.|+..|... .. .|+-+|.. ..+..+-+ .|+- - +..|.. .++.-+.+||+|.+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWN 191 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEE
Confidence 34567999999999999988765 32 23333332 34444433 3432 1 223332 33322379999998
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
..+|..+ . ...+|-++-|+|||||++++.
T Consensus 192 ~~~l~~~-~---~~~~l~~~~~~LkpgG~l~~~ 220 (312)
T 3vc1_A 192 NESTMYV-D---LHDLFSEHSRFLKVGGRYVTI 220 (312)
T ss_dssp ESCGGGS-C---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhC-C---HHHHHHHHHHHcCCCcEEEEE
Confidence 8887765 2 888999999999999999985
No 379
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.48 E-value=1.1e-05 Score=85.14 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=34.6
Q ss_pred CCcccccccccccccccc---CCcchHHHHHhhcccccCCcEEEEe
Q 003776 702 YPRTYDLLHADHLFSKIK---KRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 702 yprtyDl~Ha~~~~s~~~---~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.+.+||+|.+..++.... ....+..+|-++-|+|||||+|||.
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 457999999888764332 4456778899999999999999995
No 380
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.46 E-value=7e-05 Score=70.55 Aligned_cols=126 Identities=12% Similarity=0.167 Sum_probs=71.7
Q ss_pred cccccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHhhcccccccccccc---------cCCCCcccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYERGLFGIYHDWCES---------FSTYPRTYDLL 709 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~---------f~typrtyDl~ 709 (796)
-.+|||+|||.|.|+.+|... .|..+-+.| ...+ ..+--+..|+... ++ +.+||+|
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~--~~~~D~i 92 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDPI-----VGVDFLQGDFRDELVMKALLERVG--DSKVQVV 92 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCCC-----TTEEEEESCTTSHHHHHHHHHHHT--TCCEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---cccc-----CcEEEEEcccccchhhhhhhccCC--CCceeEE
Confidence 347999999999999888654 344443333 2111 1221123344322 22 4789999
Q ss_pred ccccccccccCC--c------chHHHHHhhcccccCCcEEEEeccH-HHHHHHHHHHhcCCceEEEee------ccCCce
Q 003776 710 HADHLFSKIKKR--C------NLVAVVAEVDRILRPEGKLIVRDDV-ETINELESMVKGMQWEVRMTY------SKDKEG 774 (796)
Q Consensus 710 Ha~~~~s~~~~r--C------~~~~~l~E~DRiLRP~G~~i~rd~~-~~~~~~~~~~~~l~W~~~~~~------~~~~e~ 774 (796)
.++..+...... - .+..+|-++-|+|||||.+++.... .....+...... .|...... ....+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREV 171 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEE
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceE
Confidence 987766533211 0 1157789999999999999996322 122333333333 36543321 123567
Q ss_pred EEEEEe
Q 003776 775 LLCVEK 780 (796)
Q Consensus 775 ~l~~~K 780 (796)
++++++
T Consensus 172 ~~~~~~ 177 (180)
T 1ej0_A 172 YIVATG 177 (180)
T ss_dssp EEEEEE
T ss_pred EEEEcc
Confidence 777765
No 381
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.46 E-value=3.8e-05 Score=80.14 Aligned_cols=132 Identities=11% Similarity=0.209 Sum_probs=83.2
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----cc---cccccccccccCCCCcccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
..|||+|||.|.++.+|... |-+ +|+-+|.. ..+.++-++ |+ --+..|+..+++ +.+||+|-++.-|
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 46999999999999888632 221 34444443 444444333 33 223446666554 4789999987433
Q ss_pred ccc------------cCC----------cchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHHhcCCceE--EEeeccC
Q 003776 716 SKI------------KKR----------CNLVAVVAEVDRILRPEGKLIVRDDVETINELESMVKGMQWEV--RMTYSKD 771 (796)
Q Consensus 716 s~~------------~~r----------C~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~--~~~~~~~ 771 (796)
... ..+ -.+..++-++-|+|+|||++++.........+..+++...|.. ...+..+
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g 266 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGD 266 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTTS
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 221 111 1235678899999999999999755555566777776655643 2335556
Q ss_pred CceEEEEEe
Q 003776 772 KEGLLCVEK 780 (796)
Q Consensus 772 ~e~~l~~~K 780 (796)
..++++++|
T Consensus 267 ~~r~~~~~~ 275 (276)
T 2b3t_A 267 NERVTLGRY 275 (276)
T ss_dssp SEEEEEEEC
T ss_pred CCcEEEEEE
Confidence 778888775
No 382
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.46 E-value=2.9e-05 Score=84.39 Aligned_cols=96 Identities=17% Similarity=0.175 Sum_probs=63.6
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhH----HHhhcc---cccccccccccCCCC-ccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPI----IYERGL---FGIYHDWCESFSTYP-RTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~----i~eRGl---ig~~~~~ce~f~typ-rtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++..|...+. -|.-|=+. ..+.. +-..|+ |-+++.=.+.++ +| .+||+|.+..+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s---~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECS---SISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcH---HHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 35799999999999988887743 33333333 23332 333454 333332223333 34 89999998776
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
+..+...-.+..+|-++.|+|+|||++|.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 55555555677889999999999999974
No 383
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.46 E-value=2.9e-05 Score=84.58 Aligned_cols=100 Identities=13% Similarity=0.314 Sum_probs=64.7
Q ss_pred cccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHhh----cc----cccccccccccCCCCcccccccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYER----GL----FGIYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~eR----Gl----ig~~~~~ce~f~typrtyDl~Ha 711 (796)
...+.|||+|||.|.++.+|... .+ .++-.|-+..+..+-++ |+ -=+-+|....-.++|..||+|.+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 46789999999999999988652 22 22222223334443332 43 22234443321125689999999
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.+++-.|... ....+|-++-|+|+|||.++|.|
T Consensus 255 ~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 8888766532 23457899999999999999853
No 384
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.46 E-value=1.5e-05 Score=80.49 Aligned_cols=108 Identities=10% Similarity=0.131 Sum_probs=70.8
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCC-CccccccccccccccccC
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTY-PRTYDLLHADHLFSKIKK 720 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~ty-prtyDl~Ha~~~~s~~~~ 720 (796)
..|||+|||.|.++.+|..... .|+-+|.. ..+..+-++. +-=+..|+.+.+|.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 5699999999999999987743 34444444 5566666652 222345665666643 4799999854
Q ss_pred CcchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHHhcCCceE
Q 003776 721 RCNLVAVVAEVDRILRPEGKLIVRDDVETINELESMVKGMQWEV 764 (796)
Q Consensus 721 rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~ 764 (796)
-....+|-++-|+|||||.++.-........+..++....+..
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 1345678899999999999994322223344555555555544
No 385
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.45 E-value=4.6e-05 Score=76.29 Aligned_cols=128 Identities=20% Similarity=0.203 Sum_probs=74.8
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHh----hcccc----cccccccccCCCC-----cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYE----RGLFG----IYHDWCESFSTYP-----RT 705 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~e----RGlig----~~~~~ce~f~typ-----rt 705 (796)
.-.+|||+|||.|.++.+|... ..- |+-+|.. ..+..+-+ .|+-. +..|..+.++.++ .+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGT---LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCE---EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 4468999999999999988765 222 2222322 23333322 24321 2234444444333 78
Q ss_pred ccccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHHHH----HHhcCCceEEEeec
Q 003776 706 YDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINELES----MVKGMQWEVRMTYS 769 (796)
Q Consensus 706 yDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~~~----~~~~l~W~~~~~~~ 769 (796)
||+|..++- .-....+|-++=|+|||||++++.+.. .....++. +...-+|...+.
T Consensus 141 fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-- 212 (225)
T 3tr6_A 141 YDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI-- 212 (225)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE--
T ss_pred ccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE--
Confidence 999985542 223456788888999999999985332 11223333 334456666554
Q ss_pred cCCceEEEEEec
Q 003776 770 KDKEGLLCVEKS 781 (796)
Q Consensus 770 ~~~e~~l~~~K~ 781 (796)
....++++++|+
T Consensus 213 p~~dG~~~~~k~ 224 (225)
T 3tr6_A 213 PIGDGLTLARKK 224 (225)
T ss_dssp CSTTCEEEEEEC
T ss_pred EcCCccEEEEEC
Confidence 224678888884
No 386
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.45 E-value=6.1e-05 Score=73.89 Aligned_cols=126 Identities=15% Similarity=0.237 Sum_probs=68.8
Q ss_pred ccccccCccccceeeeccCC------CeEEEEeecCCCCCChhHHHhhcccccccccccc--------------------
Q 003776 645 RNVMDMRSVYGGFAAAMKDI------SVWVMNVISIDSPDTLPIIYERGLFGIYHDWCES-------------------- 698 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~------~vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~-------------------- 698 (796)
..|||+|||.|+++.+|..+ .|+.+-+.|.... .++.-+..|+...
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhhH
Confidence 46999999999999888653 2444444442111 1211122233221
Q ss_pred ------cCCCCccccccccccccccccCC--------cchHHHHHhhcccccCCcEEEEeccH-HHHHHHHHHHhcCCce
Q 003776 699 ------FSTYPRTYDLLHADHLFSKIKKR--------CNLVAVVAEVDRILRPEGKLIVRDDV-ETINELESMVKGMQWE 763 (796)
Q Consensus 699 ------f~typrtyDl~Ha~~~~s~~~~r--------C~~~~~l~E~DRiLRP~G~~i~rd~~-~~~~~~~~~~~~l~W~ 763 (796)
|+ +.+||+|.++..+...... -....+|-++-|+|||||.+++.... .....+...++..-..
T Consensus 96 ~~~~~~~~--~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~ 173 (201)
T 2plw_A 96 YKLKEILQ--DKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQL 173 (201)
T ss_dssp HHHHHHHT--TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEE
T ss_pred HHHHhhcC--CCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHhe
Confidence 22 3689999987654321100 01124788899999999999985221 2233444444443222
Q ss_pred EEEee-----ccCCceEEEEEe
Q 003776 764 VRMTY-----SKDKEGLLCVEK 780 (796)
Q Consensus 764 ~~~~~-----~~~~e~~l~~~K 780 (796)
+.... ....|.++||++
T Consensus 174 v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 174 VHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEECCCC-----CCEEEEEEEE
T ss_pred EEEECCcccCCcCceEEEEEec
Confidence 33221 124578888876
No 387
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.43 E-value=5.8e-05 Score=75.53 Aligned_cols=111 Identities=11% Similarity=0.049 Sum_probs=69.6
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----ccc---c-cccccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLF---G-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gli---g-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++.+|..... .|+-+|-. ..+..+-++ |+- - +..|..+.++.. ..||+|-+.+.
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~ 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGG 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSC
T ss_pred CCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCc
Confidence 35799999999999988876532 23333333 344443332 432 1 223333333332 36999875542
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCCceEEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQWEVRM 766 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~W~~~~ 766 (796)
+ ... +|-++-|+|||||.+++.. ..+.+..+..+++...+++..
T Consensus 132 ~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 132 G-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp C-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred c-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 2 355 8999999999999999974 455666777777666666543
No 388
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.43 E-value=0.0018 Score=71.22 Aligned_cols=85 Identities=12% Similarity=0.023 Sum_probs=61.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCceeEEEEcCCCcc
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd~SFDlVvss~~~l~ 465 (796)
.++.+||||||++|.++..|+++ .|++||+.+.+-. . .....+.+...|...+..+...||+|+|-..
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~-l------~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~--- 279 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQS-L------MDTGQVTWLREDGFKFRPTRSNISWMVCDMV--- 279 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHH-H------HTTTCEEEECSCTTTCCCCSSCEEEEEECCS---
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChh-h------ccCCCeEEEeCccccccCCCCCcCEEEEcCC---
Confidence 46899999999999999999987 7999998763311 1 1223456777777666666678999999762
Q ss_pred cccchHHHHHHHHhhcCCC
Q 003776 466 WHIEGGKLLLELNRVLRPG 484 (796)
Q Consensus 466 w~~d~~~~L~Ei~RVLKPG 484 (796)
..+..++.-+.+.|..|
T Consensus 280 --~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 --EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp --SCHHHHHHHHHHHHHTT
T ss_pred --CChHHhHHHHHHHHhcc
Confidence 24566666666666665
No 389
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.41 E-value=4.8e-05 Score=76.01 Aligned_cols=118 Identities=16% Similarity=0.198 Sum_probs=71.2
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc--c-ccccccccccCC-C-Ccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL--F-GIYHDWCESFST-Y-PRTYDLLHADH 713 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl--i-g~~~~~ce~f~t-y-prtyDl~Ha~~ 713 (796)
..|||+|||.|.|+.+|... |- .+|+-+|-. ..+..+.+ .|+ | -+..|+.. ++. + +.+||+|.+..
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEES
T ss_pred CeEEEEccCcCHHHHHHHHHCCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEEC
Confidence 46999999999999888643 11 133333433 34443333 343 1 12334433 331 2 46899999763
Q ss_pred cccccc------CCcchHHHHHhhcccccCCcEEEEe-ccHHHHHHHHHHHhcCCceEEE
Q 003776 714 LFSKIK------KRCNLVAVVAEVDRILRPEGKLIVR-DDVETINELESMVKGMQWEVRM 766 (796)
Q Consensus 714 ~~s~~~------~rC~~~~~l~E~DRiLRP~G~~i~r-d~~~~~~~~~~~~~~l~W~~~~ 766 (796)
.. .|. .|-....+|-++-|+|+|||.+++. |.......+.+++....|....
T Consensus 120 ~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 120 SD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 22 121 1112357899999999999999997 4556667777766655676543
No 390
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.41 E-value=4.4e-05 Score=81.69 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=66.9
Q ss_pred ccccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHH----hhccc----ccccccccccCCCCccccc
Q 003776 639 INWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIY----ERGLF----GIYHDWCESFSTYPRTYDL 708 (796)
Q Consensus 639 i~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~----eRGli----g~~~~~ce~f~typrtyDl 708 (796)
..|...+.|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+- +.|+- =+-+|..+++| ..||+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p---~~~D~ 238 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP---AGAGG 238 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---CSCSE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC---CCCcE
Confidence 45777899999999999999888652 2222222 3233333332 22432 23345555544 48999
Q ss_pred cccccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 709 LHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
|.+.+++..|... ....+|-++-|+|+|||+++|-|
T Consensus 239 v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 239 YVLSAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 9998888776543 23568999999999999999964
No 391
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.40 E-value=0.00024 Score=75.76 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=70.1
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeEEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAV 441 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v 441 (796)
|...+..-+..+.+. ..+ .++.+||||||++|.|+..++++ .|.++|+...+...... ....+..+....
T Consensus 62 yrSRaa~KL~ei~ek-~l~---~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~ 135 (300)
T 3eld_A 62 SVSRGAAKIRWLHER-GYL---RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFK 135 (300)
T ss_dssp CSSTTHHHHHHHHHH-TSC---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEE
T ss_pred ccchHHHHHHHHHHh-CCC---CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEee
Confidence 333333334444444 322 36889999999999999999975 57788886432100000 000011223333
Q ss_pred cCCCCCCCCCCceeEEEEcCCCcc---cccch---HHHHHHHHhhcCCC-cEEEEEeCC
Q 003776 442 MGTERLPFPGIVFDAVHCARCRVP---WHIEG---GKLLLELNRVLRPG-GFFIWSATP 493 (796)
Q Consensus 442 ~d~e~LPfpd~SFDlVvss~~~l~---w~~d~---~~~L~Ei~RVLKPG-G~fv~s~~~ 493 (796)
.+.....+....||+|+|..+ -. +..|. ..+|.-+.++|+|| |.|++-..-
T Consensus 136 ~~~di~~l~~~~~DlVlsD~A-PnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 136 DKSNVFTMPTEPSDTLLCDIG-ESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSCCTTTSCCCCCSEEEECCC-CCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCceeeecCCCCcCEEeecCc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 333333455678999999753 22 01121 23466678999999 999987543
No 392
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.37 E-value=4e-05 Score=79.51 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=33.8
Q ss_pred cccccccccccccccc-CCcchHHHHHhhcccccCCcEEEEec
Q 003776 704 RTYDLLHADHLFSKIK-KRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 704 rtyDl~Ha~~~~s~~~-~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.+||+|-+..+|...+ +.=.+..+|-+|-|+|||||+||+++
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5899999988887543 22345678999999999999999984
No 393
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.36 E-value=5.6e-05 Score=83.07 Aligned_cols=97 Identities=18% Similarity=0.210 Sum_probs=62.6
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhH----HHhhcc---cccccccccccCCCCcccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPI----IYERGL---FGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~----i~eRGl---ig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
=..|||+|||.|.++..|..... -|.-|=+. ..+.. +-..|+ |-+++.=.+.++ +|..||+|++..++
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT---KMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMG 139 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS---TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCB
T ss_pred CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH---HHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChh
Confidence 45799999999999888877643 33333333 33332 333454 333332223333 45899999986544
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
......-.+..+|-+++|+|+|||++|+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 43333344677899999999999999864
No 394
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.35 E-value=5.5e-05 Score=79.48 Aligned_cols=111 Identities=15% Similarity=0.185 Sum_probs=71.6
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcccc---cc-cccccccCCCCcccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGLFG---IY-HDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGlig---~~-~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
..|||+|||.|+|+.+|....-- .|+-+|.. ..+..+-+ .|+-. ++ .|. ..++. +.+||+|.++..+
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-~~~~~-~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMGYVV 202 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEECCCS
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-HHhcc-cCCccEEEECCch
Confidence 46999999999999888653211 23333443 33433322 24432 22 233 22332 5789999865443
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEecc-------HHHHHHHHHHHhcCCceEEE
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-------VETINELESMVKGMQWEVRM 766 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-------~~~~~~~~~~~~~l~W~~~~ 766 (796)
. ...+|-++-|+|+|||++++.+. ...+..+...++...|++..
T Consensus 203 ~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 R-------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp S-------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred h-------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 2 25567789999999999999533 24678888899998998876
No 395
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.33 E-value=0.0015 Score=66.16 Aligned_cols=92 Identities=11% Similarity=-0.048 Sum_probs=63.5
Q ss_pred CCEEEEECCCCchhHHHHhh---CCeEEEeCChhhHHHHHHHHHHHcCC----CeEEEEcCCCC---------------C
Q 003776 390 TRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGI----PAISAVMGTER---------------L 447 (796)
Q Consensus 390 ~~~VLDIGCGtG~~a~~La~---~~V~gvDiSp~dl~~A~~q~A~ergl----~~~~~v~d~e~---------------L 447 (796)
.++||++||| +.+..|++ ..|++++.++.....++..++ +.|+ .+.+..+++.. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 6799999996 45555554 489999999988877774444 4554 34556565422 2
Q ss_pred C--------C-CCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEE
Q 003776 448 P--------F-PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (796)
Q Consensus 448 P--------f-pd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s 490 (796)
+ . ..++||+|+.-.. ....++..+.+.|+|||++++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEe
Confidence 2 2 2368999998641 1236677788999999999864
No 396
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.33 E-value=0.00013 Score=76.65 Aligned_cols=93 Identities=14% Similarity=-0.011 Sum_probs=58.2
Q ss_pred CEEEEECCCCchhHHHHhhC--CeEEEeCChhhHHHHHHHH--HHHc----C-C--CeEEEEcCCCC-CCCCCCceeEEE
Q 003776 391 RVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQF--ALER----G-I--PAISAVMGTER-LPFPGIVFDAVH 458 (796)
Q Consensus 391 ~~VLDIGCGtG~~a~~La~~--~V~gvDiSp~dl~~A~~q~--A~er----g-l--~~~~~v~d~e~-LPfpd~SFDlVv 458 (796)
.+|||+|||+|..+..|+.+ .|+++|+++.....++... +... + + .+.+...|... |+.....||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 79999999999999998864 8999999997644443222 2111 1 1 24566666533 443224799999
Q ss_pred EcCCCcccccchHHHHHHHHhhcCCCc
Q 003776 459 CARCRVPWHIEGGKLLLELNRVLRPGG 485 (796)
Q Consensus 459 ss~~~l~w~~d~~~~L~Ei~RVLKPGG 485 (796)
+... .++ .....++++..++||+.+
T Consensus 170 lDP~-y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPM-FPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCC-CCC-CCC-----HHHHHHHHHS
T ss_pred EcCC-CCC-cccchHHHHHHHHHHHhh
Confidence 9864 332 223456777788888765
No 397
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.33 E-value=0.00021 Score=73.56 Aligned_cols=132 Identities=13% Similarity=0.156 Sum_probs=76.0
Q ss_pred cccccccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHhhccc---cc-ccccccccCCC-----Ccccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYERGLF---GI-YHDWCESFSTY-----PRTYD 707 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eRGli---g~-~~~~ce~f~ty-----prtyD 707 (796)
..-++|||+|||.|.++.+|... .|+.+-+-|.--...-..+-..|+- -+ ..|..+.++.+ +.+||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 34678999999999998887642 3444444333222223334444542 22 22333434433 47899
Q ss_pred ccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHHHHHH----hcCCceEEEeeccC
Q 003776 708 LLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINELESMV----KGMQWEVRMTYSKD 771 (796)
Q Consensus 708 l~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~~~~~----~~l~W~~~~~~~~~ 771 (796)
+|.++... -....+|-++-|+|||||++++.|.. .....++++. ..=++++.+. .-
T Consensus 139 ~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~ 210 (242)
T 3r3h_A 139 FIFIDADK------TNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--AI 210 (242)
T ss_dssp EEEEESCG------GGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE--SS
T ss_pred EEEEcCCh------HHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE--Ec
Confidence 99866531 12345677888999999999984321 1122333333 4445665544 22
Q ss_pred CceEEEEEec
Q 003776 772 KEGLLCVEKS 781 (796)
Q Consensus 772 ~e~~l~~~K~ 781 (796)
.+++++++|+
T Consensus 211 ~dG~~~~~k~ 220 (242)
T 3r3h_A 211 ADGMFLVQPI 220 (242)
T ss_dssp SSCEEEEEEC
T ss_pred cCceEEEEEc
Confidence 4678888874
No 398
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.33 E-value=0.00018 Score=79.49 Aligned_cols=118 Identities=16% Similarity=0.000 Sum_probs=72.5
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC---CeEEEeCChhhHHHHHHHHHHH--------cCCCeEE
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALE--------RGIPAIS 439 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~---~V~gvDiSp~dl~~A~~q~A~e--------rgl~~~~ 439 (796)
..|.+.|..... .. .++++||-||.|.|..++.+++. .|+.++|++..+..++.-+..- +...+..
T Consensus 190 ~~Y~e~l~h~~l-~~--~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~v 266 (381)
T 3c6k_A 190 LAYTRAIMGSGK-ED--YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQV 266 (381)
T ss_dssp HHHHHHHTTTTC-CC--CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEE
T ss_pred HHHHHHHHHHHh-hc--CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceee
Confidence 346665544332 22 34689999999999999999875 7899999998776665322110 0111344
Q ss_pred EEcCCCC----CCCCCCceeEEEEcCCC-----ccccc----chHHHHHHHHhhcCCCcEEEEEe
Q 003776 440 AVMGTER----LPFPGIVFDAVHCARCR-----VPWHI----EGGKLLLELNRVLRPGGFFIWSA 491 (796)
Q Consensus 440 ~v~d~e~----LPfpd~SFDlVvss~~~-----l~w~~----d~~~~L~Ei~RVLKPGG~fv~s~ 491 (796)
.+.|... .+-..+.||+|+.-... .+... -...++..++++|+|||.|+...
T Consensus 267 ii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 267 LIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 5555321 11134679999985310 01111 11466788999999999998653
No 399
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.31 E-value=0.00011 Score=73.98 Aligned_cols=116 Identities=9% Similarity=0.111 Sum_probs=69.5
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcc--cc-cccccccccCC-C-Ccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGL--FG-IYHDWCESFST-Y-PRTYDLLHADH 713 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGl--ig-~~~~~ce~f~t-y-prtyDl~Ha~~ 713 (796)
..|||+|||.|.|+.+|... |- .+|+-+|-. .-+..+.. .|+ |- +.+|... ++. + +.+||+|+...
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEES
T ss_pred ceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEEC
Confidence 35999999999999988653 21 134444544 34444333 354 22 2234333 321 2 47899987432
Q ss_pred cccccc------CCcchHHHHHhhcccccCCcEEEEe-ccHHHHHHHHHHHhcCCceE
Q 003776 714 LFSKIK------KRCNLVAVVAEVDRILRPEGKLIVR-DDVETINELESMVKGMQWEV 764 (796)
Q Consensus 714 ~~s~~~------~rC~~~~~l~E~DRiLRP~G~~i~r-d~~~~~~~~~~~~~~l~W~~ 764 (796)
. ..|. .|-....+|-++-|+|+|||.+++. |.......+..++....|..
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 1 1221 2222467899999999999999987 56666666666655545654
No 400
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.31 E-value=4.2e-05 Score=76.12 Aligned_cols=98 Identities=26% Similarity=0.325 Sum_probs=62.6
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----c--ccccccccccccCCCCccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----G--LFGIYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----G--lig~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
-..|||+|||.|.++..|....- .|+-+|.. ..+..+-++ | +--+..|... ++.-+.+||+|.+..++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCchH
Confidence 45799999999999988876633 44444443 344444333 1 2223334433 332247999999887743
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
.+. .-....+|-++-|+|+|||.+++.+.
T Consensus 115 ~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 115 HFE-PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GCC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCC-HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 321 12346789999999999999998754
No 401
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.31 E-value=4.2e-05 Score=82.63 Aligned_cols=99 Identities=14% Similarity=0.257 Sum_probs=62.9
Q ss_pred ccccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChh--HHHhhccc----ccccccccccCCCCccccccc
Q 003776 639 INWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLP--IIYERGLF----GIYHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 639 i~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~--~i~eRGli----g~~~~~ce~f~typrtyDl~H 710 (796)
+.|.....|||+|||.|.++.+|... .+-+..+ |-+..+. .+-..|+- =+-+|..+++ | +||+|.
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---p-~~D~v~ 252 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEVVARHRLDAPDVAGRWKVVEGDFLREV---P-HADVHV 252 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHHHTTCCCCCGGGTTSEEEEECCTTTCC---C-CCSEEE
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHHhhcccccccCCCCCeEEEecCCCCCC---C-CCcEEE
Confidence 35677899999999999999888652 3322221 1110000 00112321 2334544444 4 899999
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+.++|-.|... ....+|-++-|+|||||+++|.|
T Consensus 253 ~~~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNWGDE-DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 98888766532 12468999999999999999854
No 402
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.29 E-value=9.1e-05 Score=73.64 Aligned_cols=93 Identities=20% Similarity=0.144 Sum_probs=57.9
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHH----hhccc---cc-ccccccccCCCCccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIY----ERGLF---GI-YHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~----eRGli---g~-~~~~ce~f~typrtyDl~H 710 (796)
.-+.|||+|||.|.++.+|... ..-|.. +|.. ..+.++- ..|+- -+ ..|..+.++..+. ||+|.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~---vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVM---IDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEE---EESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEE---EECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEE
Confidence 3568999999999999888754 222222 2222 2333322 23442 22 2344444455567 99998
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++. .......+|-++-|+|||||++++.+
T Consensus 132 ~~~------~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 132 MDC------DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EET------TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EcC------ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 652 12345678889999999999999854
No 403
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.28 E-value=1.5e-05 Score=79.37 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=70.9
Q ss_pred cccccccCccccceeeeccCCC--eEEEEeecCCCCCChhHHHhhccccccccccccc------CCCC----cccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDIS--VWVMNVISIDSPDTLPIIYERGLFGIYHDWCESF------STYP----RTYDLLHA 711 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~--vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~f------~typ----rtyDl~Ha 711 (796)
-.+|||+|||.|+|+.+|..+. |+-+-+.|.... .|+--+..|....- ..++ .+||+|-+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~--------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI--------AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC--------TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC--------CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEec
Confidence 4679999999999999998764 444444443211 13222333433310 0011 37999987
Q ss_pred ccccccc--------cCCcchHHHHHhhcccccCCcEEEEecc-HHHHHHHHHHHhcCCceE-EEee-----ccCCceEE
Q 003776 712 DHLFSKI--------KKRCNLVAVVAEVDRILRPEGKLIVRDD-VETINELESMVKGMQWEV-RMTY-----SKDKEGLL 776 (796)
Q Consensus 712 ~~~~s~~--------~~rC~~~~~l~E~DRiLRP~G~~i~rd~-~~~~~~~~~~~~~l~W~~-~~~~-----~~~~e~~l 776 (796)
+.-.... .....+..+|-++-|+|||||.||+.-. ......+..+++.. +.. .+.. ....|.++
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEEE
Confidence 6532211 1111234677888999999999998522 11223444444443 333 2221 23478899
Q ss_pred EEEec
Q 003776 777 CVEKS 781 (796)
Q Consensus 777 ~~~K~ 781 (796)
||++.
T Consensus 177 v~~~~ 181 (191)
T 3dou_A 177 MFFGF 181 (191)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 98763
No 404
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.28 E-value=4.7e-05 Score=77.42 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=61.0
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc-cc-cccccccccCCCCcccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL-FG-IYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl-ig-~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
.-..|||+|||.|.++..|..... +|+-+|.. ..+..+-++ |+ +- +..|... ++ ++.+||+|.+....
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFST 115 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCc
Confidence 346899999999999999987654 34444543 444444332 32 11 2233332 33 35789999854221
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
-.+...-.+..+|-++-|+|+|||.+|+.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 116 IMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 12222224567899999999999999985
No 405
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.27 E-value=5.2e-05 Score=80.99 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=59.8
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----ccc--------ccccccc------cccC--CCC
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLF--------GIYHDWC------ESFS--TYP 703 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gli--------g~~~~~c------e~f~--typ 703 (796)
..|||+|||.|+....+.....+ .|+=+|-. .-|..+-+| |+- -..+..+ +.++ ..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 56999999999877665544433 34445544 455555444 210 0111111 2221 124
Q ss_pred ccccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 704 RTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 704 rtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
.+||+|-+..++-...+.-.+..+|-+|-|+|||||+||+...
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7999998765442111111356889999999999999998743
No 406
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.27 E-value=6.5e-05 Score=80.89 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=61.1
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhHH----Hhhcc---cccccccccccCCCC-ccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPII----YERGL---FGIYHDWCESFSTYP-RTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~i----~eRGl---ig~~~~~ce~f~typ-rtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++..|...+. -|.-|=+ ...+..+ -..|+ |-+++.-.+.++ +| ..||+|.+..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~---s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDM---SSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEES---STHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEECh---HHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 35799999999999888876543 2333322 2223332 22354 333332223333 34 78999998766
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
+..+...-.+..+|-++.|+|+|||.+|.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 55444444567889999999999999983
No 407
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.27 E-value=0.00022 Score=74.73 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=61.7
Q ss_pred CCCCEEEEECCCCchhHHHHhh----------------CCeEEEeCCh---hhHHHHHH------HHHH---Hc------
Q 003776 388 KRTRVVLDVGCGVASFGGFLFD----------------RGVLTMSFAP---KDEHEAQV------QFAL---ER------ 433 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~----------------~~V~gvDiSp---~dl~~A~~------q~A~---er------ 433 (796)
.+..+|||||+|+|..+..++. .+|++++..| .++..+.. ..|+ ..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 3457999999999986665432 2689999877 44443310 0111 11
Q ss_pred ----------CCCeEEEEcCCCC-CCCCC----CceeEEEEcCCCccc-ccc--hHHHHHHHHhhcCCCcEEEE
Q 003776 434 ----------GIPAISAVMGTER-LPFPG----IVFDAVHCARCRVPW-HIE--GGKLLLELNRVLRPGGFFIW 489 (796)
Q Consensus 434 ----------gl~~~~~v~d~e~-LPfpd----~SFDlVvss~~~l~w-~~d--~~~~L~Ei~RVLKPGG~fv~ 489 (796)
...+.+..+|+.. ||..+ ..||+|+.-.. .+- +++ ...+|..+.|+|||||.|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~f-sp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGF-APAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSS-CTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCC-CcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1223455566432 44322 27999998531 111 222 26899999999999999983
No 408
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.24 E-value=2.7e-05 Score=75.06 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=60.8
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc----cccccccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL----FGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl----ig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
-.+|||+|||.|.++.+|...+. -.|+-+|-. ..+..+-+ .|+ -=+..|+.+.++..+..||+|.++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 34799999999999988877653 234444443 33443322 232 12234555544555678999998766
Q ss_pred cccccCCcchHHHHHhhc--ccccCCcEEEEeccH
Q 003776 715 FSKIKKRCNLVAVVAEVD--RILRPEGKLIVRDDV 747 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~D--RiLRP~G~~i~rd~~ 747 (796)
|.. .....++-.+- |+|+|||++++....
T Consensus 110 ~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 YAK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SHH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 531 22344455554 999999999996433
No 409
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.23 E-value=0.00011 Score=78.50 Aligned_cols=99 Identities=11% Similarity=0.221 Sum_probs=65.8
Q ss_pred cccccccccccCccccceeeeccCC-CeEEEEeecCCCCCChhHHHhh----c----ccccccccccccCCCCccccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSPDTLPIIYER----G----LFGIYHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~~~l~~i~eR----G----lig~~~~~ce~f~typrtyDl~H 710 (796)
.|.. ..|||+|||.|.++.+|... |-+ .++-.|-+..+..+-++ | +--+-+|..++ +|..||+|.
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 238 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNGDIYL 238 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSCSEEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCCCEEE
Confidence 4566 89999999999999988653 211 22222333444443332 3 22234555553 467899999
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+.++|..|... ....+|-++-|+|+|||+++|.|
T Consensus 239 ~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 239 LSRIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EESCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EchhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 98888766422 22478999999999999999864
No 410
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.23 E-value=7.5e-05 Score=77.71 Aligned_cols=117 Identities=10% Similarity=0.030 Sum_probs=73.1
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc-c----------------------cc-ccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG-L----------------------FG-IYHDWCESF 699 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG-l----------------------ig-~~~~~ce~f 699 (796)
..|||+|||.|.++..|.+... .|+-+|-. .-|..+..|- + |- +..|... +
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~-l 145 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD-L 145 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT-G
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc-C
Confidence 4699999999999999987754 45555554 4444443331 1 11 1122222 2
Q ss_pred CCC-CccccccccccccccccCCcchHHHHHhhcccccCCcEEEEec---------c---HHHHHHHHHHHhcCCceEEE
Q 003776 700 STY-PRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD---------D---VETINELESMVKGMQWEVRM 766 (796)
Q Consensus 700 ~ty-prtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd---------~---~~~~~~~~~~~~~l~W~~~~ 766 (796)
+.- +.+||+|-+..+|..+ .......++-+|-|+|||||.++|-. . .-..+++..+... .|++..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 221 2689999987777654 23445678999999999999996421 0 0124567777765 487754
Q ss_pred e
Q 003776 767 T 767 (796)
Q Consensus 767 ~ 767 (796)
.
T Consensus 224 ~ 224 (252)
T 2gb4_A 224 L 224 (252)
T ss_dssp E
T ss_pred E
Confidence 3
No 411
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.21 E-value=4.2e-05 Score=76.36 Aligned_cols=117 Identities=10% Similarity=0.110 Sum_probs=69.9
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh-cc--------------cccccccccccCCCC----c
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER-GL--------------FGIYHDWCESFSTYP----R 704 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR-Gl--------------ig~~~~~ce~f~typ----r 704 (796)
..|||+|||.|.++..|.++.. .|+-+|-. .-|..+.+| ++ .+-..-.|--+-..| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 4699999999999999987643 34444444 445555554 11 011111122222222 6
Q ss_pred cccccccccccccccCCcchHHHHHhhcccccCCcEEE-Ee-ccH----------HHHHHHHHHHhcCCceEEE
Q 003776 705 TYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLI-VR-DDV----------ETINELESMVKGMQWEVRM 766 (796)
Q Consensus 705 tyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i-~r-d~~----------~~~~~~~~~~~~l~W~~~~ 766 (796)
+||+|-+..+|..+. ......+|-||-|+|||||+++ +. +.. -...+++.+... .|++..
T Consensus 101 ~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 101 HCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp SEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred CEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 899998776665432 2234567899999999999833 21 110 124567777776 777654
No 412
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.21 E-value=0.00017 Score=77.30 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=54.4
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCCCChhHH--Hhhcc--ccccc--ccccccCCCCccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSPDTLPII--YERGL--FGIYH--DWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~~~l~~i--~eRGl--ig~~~--~~ce~f~typrtyDl~Ha~~~~s 716 (796)
-..|||+|||.|+|+..|..+ .|.-+-+....++..+..+ -..|. |-++. |.. .++ +.+||+|.++..|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~-~l~--~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVF-FIP--PERCDTLLCDIGES 159 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccc-cCC--cCCCCEEEECCccc
Confidence 357999999999999888776 3444333111111111000 00111 11111 221 122 46899999887764
Q ss_pred cccCCcch-----HHHHHhhcccccCCcEEEEe
Q 003776 717 KIKKRCNL-----VAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 717 ~~~~rC~~-----~~~l~E~DRiLRP~G~~i~r 744 (796)
.....+ ..+|-++-|+|||||.|++.
T Consensus 160 --~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 160 --SPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp --CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred --cCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 111111 14688899999999999985
No 413
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.19 E-value=0.00019 Score=73.82 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=60.0
Q ss_pred cccccccCccccceeeeccCC--C-eEEEEeecCCC----CCChhHHHhh----cc---cccc-cc-cc-cccCCCCccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--S-VWVMNVISIDS----PDTLPIIYER----GL---FGIY-HD-WC-ESFSTYPRTY 706 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~-vwvmnv~p~~~----~~~l~~i~eR----Gl---ig~~-~~-~c-e~f~typrty 706 (796)
-..|||+|||.|.++..|... + .-|.-|-+... +..+..+-+| |+ |-++ .| +. +.++..+.+|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 457999999999999888764 2 44444444432 2356654433 32 2221 22 21 2233234799
Q ss_pred cccccccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 707 DLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 707 Dl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
|+|++.++|...... ..++-.+.++|+|||++++.
T Consensus 124 D~v~~~~~l~~~~~~---~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 124 DRVVLAHSLWYFASA---NALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp SEEEEESCGGGSSCH---HHHHHHHHHHTTTCSEEEEE
T ss_pred EEEEEccchhhCCCH---HHHHHHHHHHhCCCCEEEEE
Confidence 999998888655432 33455556667779999995
No 414
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.17 E-value=0.00028 Score=76.37 Aligned_cols=136 Identities=21% Similarity=0.293 Sum_probs=83.9
Q ss_pred cccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHh----hccc----ccccccccccCCCCcccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYE----RGLF----GIYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~e----RGli----g~~~~~ce~f~typrtyDl~ 709 (796)
.+.....|||+|||.|.++.+|... .+-+..+ |-+..+..+-+ .|+- =+.+|..+++ |..||+|
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v 252 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLV---ELAGPAERARRRFADAGLADRVTVAEGDFFKPL---PVTADVV 252 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SCCEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEE---eCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---CCCCCEE
Confidence 4566788999999999999988654 2322222 22223333322 2332 2334555544 4459999
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEecc--H--H-----------------------HHHHHHHHHhcCCc
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD--V--E-----------------------TINELESMVKGMQW 762 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~--~--~-----------------------~~~~~~~~~~~l~W 762 (796)
.+.++|-.+... ....+|-++-|+|+|||+++|-+. . + ....++.++..--+
T Consensus 253 ~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 331 (374)
T 1qzz_A 253 LLSFVLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331 (374)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTE
T ss_pred EEeccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 988888765422 124689999999999999998765 2 1 23456667776677
Q ss_pred eEEEe-eccCCc-----eEEEEEecc
Q 003776 763 EVRMT-YSKDKE-----GLLCVEKSM 782 (796)
Q Consensus 763 ~~~~~-~~~~~e-----~~l~~~K~~ 782 (796)
+.... ...... .++.++|+=
T Consensus 332 ~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 332 ALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred ceEEEEECCCCcccCCcEEEEEEECc
Confidence 65433 222333 688888753
No 415
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.17 E-value=5.1e-05 Score=76.96 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=61.3
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhc----ccccccccccc-cC-CCC--ccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERG----LFGIYHDWCES-FS-TYP--RTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRG----lig~~~~~ce~-f~-typ--rtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++..|...-- +|+-+|.. ..+..+-++- +--+..|.... ++ .|+ ..||+|.+..+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35699999999999988875422 34444443 4444444432 11122233221 00 111 24899998887
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
|.... .-....+|-++-|+|+|||+++|.+
T Consensus 134 ~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIP-VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSC-GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 76553 2345678999999999999988864
No 416
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.15 E-value=4.9e-05 Score=79.54 Aligned_cols=96 Identities=11% Similarity=0.155 Sum_probs=56.3
Q ss_pred cccccCccccceeeeccCC----CeEEEEeecCCCC-CChhHHHhh----cccccccccccccCCCC-cccccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDI----SVWVMNVISIDSP-DTLPIIYER----GLFGIYHDWCESFSTYP-RTYDLLHADHLF 715 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~----~vwvmnv~p~~~~-~~l~~i~eR----Glig~~~~~ce~f~typ-rtyDl~Ha~~~~ 715 (796)
.|||+|||+|.++.+|... .+-| +-+|.. .-|..+-+| |+..-+.-.|.-+..+| ..||+|-+..++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v---~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKI---IAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEE---EEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEE---EEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 5999999999998777542 2222 333333 444444333 43221111122122222 459999877665
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
..+. .-....+|-+|-|+|||||.|||.|
T Consensus 150 ~~~~-~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 150 QFLE-PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eecC-chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 4332 1123467999999999999999974
No 417
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.13 E-value=3.7e-05 Score=72.95 Aligned_cols=94 Identities=10% Similarity=0.132 Sum_probs=56.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc-c-ccccccccccCCCC---ccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL-F-GIYHDWCESFSTYP---RTYDLLHADHL 714 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl-i-g~~~~~ce~f~typ---rtyDl~Ha~~~ 714 (796)
..|||+|||.|.++.+|.....- |+-+|.. ..+..+-+ .|+ + =+..|+.+.++.++ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 46999999999999888765322 4444443 33333322 232 1 12233333233222 27999998877
Q ss_pred cccccCCcchHHHHHhhc--ccccCCcEEEEecc
Q 003776 715 FSKIKKRCNLVAVVAEVD--RILRPEGKLIVRDD 746 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~D--RiLRP~G~~i~rd~ 746 (796)
|. . ....++-.+- |+|+|||.+++...
T Consensus 120 ~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YA--M---DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TT--S---CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cc--h---hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 65 1 2334444444 99999999999643
No 418
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.12 E-value=4.1e-05 Score=76.96 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=58.5
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh-----cccccccccccccCCCCcccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER-----GLFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR-----Glig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
-..|||+|||.|.++..|.... -.|+-++.. ..+..+-++ .+--+..|..+.++ .+.+||+|.+..++..
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHH
Confidence 3479999999999999887653 233334433 444444444 22223344444333 2468999998877754
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
+. -++-|+|+|||.+++...
T Consensus 147 ~~---------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 147 LL---------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CC---------HHHHHTEEEEEEEEEEEC
T ss_pred HH---------HHHHHHcCCCcEEEEEEc
Confidence 32 368899999999998743
No 419
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.12 E-value=0.00037 Score=75.15 Aligned_cols=100 Identities=24% Similarity=0.447 Sum_probs=64.9
Q ss_pred cccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHh----hcc----cccccccccccCCCCcccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYE----RGL----FGIYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~e----RGl----ig~~~~~ce~f~typrtyDl~ 709 (796)
.+.....|||+|||.|.++.+|... .+-+..+ |-+..+..+-+ .|+ -=+-+|+.+++ |..||+|
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v 253 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVL---EMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---PRKADAI 253 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SSCEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEe---cCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---CCCccEE
Confidence 4556778999999999999888643 2322222 22334443332 233 22345555544 4569999
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
.+.++|..+... ....+|-++-|+|+|||+++|.+.
T Consensus 254 ~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 254 ILSFVLLNWPDH-DAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEcccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEE
Confidence 988888665421 124679999999999999998653
No 420
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.11 E-value=0.00041 Score=75.02 Aligned_cols=99 Identities=18% Similarity=0.299 Sum_probs=64.2
Q ss_pred cccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHhh----cccc----cccccccccCCCCcccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYER----GLFG----IYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~eR----Glig----~~~~~ce~f~typrtyDl~ 709 (796)
.+...+.|||+|||.|.++.+|... .+-+..+ |-+..+..+-++ |+-+ +-+|.... .+|. +|+|
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v 260 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTIL---NLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAV 260 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEE---ECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEE---ecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEE
Confidence 4567789999999999999998754 2222222 223344444333 5422 23444332 2233 4999
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.+.++|-.|.+. ....+|-++-|+|+|||+++|-+
T Consensus 261 ~~~~vlh~~~d~-~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYSANEQ-LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEechhccCCHH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 988888766431 24568999999999999998865
No 421
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.11 E-value=0.00015 Score=73.68 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=67.7
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHH----Hhhcccc---cccccccccC--CCCcccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPII----YERGLFG---IYHDWCESFS--TYPRTYDLLHA 711 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i----~eRGlig---~~~~~ce~f~--typrtyDl~Ha 711 (796)
-..|||+|||.|.++.+|... ..- |+-+|-. ..+..+ -..|+-. +.+|-.+.++ .-+.+||+|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~---v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQD---FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSE---EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCe---EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 356999999999999888643 222 3333333 333333 3345421 2233333222 12579999985
Q ss_pred cccccccc-CCc-----chHHHHHhhcccccCCcEEEEe-ccHHHHHHHHHHHhc-CCceE
Q 003776 712 DHLFSKIK-KRC-----NLVAVVAEVDRILRPEGKLIVR-DDVETINELESMVKG-MQWEV 764 (796)
Q Consensus 712 ~~~~s~~~-~rC-----~~~~~l~E~DRiLRP~G~~i~r-d~~~~~~~~~~~~~~-l~W~~ 764 (796)
... ..|. .+. ....+|-++-|+|||||+|++. |...+...+..++.. -.|+.
T Consensus 112 ~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 112 FFP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp ESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eCC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 421 2221 111 1235899999999999999997 555566666665543 34543
No 422
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.10 E-value=0.0029 Score=67.19 Aligned_cols=113 Identities=13% Similarity=0.022 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCchhHHHHh---------hCCeEEEeCChh--------------------------hHHHHHHHHHHHc
Q 003776 389 RTRVVLDVGCGVASFGGFLF---------DRGVLTMSFAPK--------------------------DEHEAQVQFALER 433 (796)
Q Consensus 389 ~~~~VLDIGCGtG~~a~~La---------~~~V~gvDiSp~--------------------------dl~~A~~q~A~er 433 (796)
..+.||++|+..|..+..|+ .+.|+++|.... .+..++ ++..+.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar-~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVR-RNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHH-HHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHH-HHHHHc
Confidence 46799999999998776653 347999996421 122333 233344
Q ss_pred CC---CeEEEEcCC-CCCC-CCCCceeEEEEcCCCcccccchHHHHHHHHhhcCCCcEEEEEeCCCCCCchHHHHHHHHH
Q 003776 434 GI---PAISAVMGT-ERLP-FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAM 508 (796)
Q Consensus 434 gl---~~~~~v~d~-e~LP-fpd~SFDlVvss~~~l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~~l~El~~~~~~l 508 (796)
|+ .+.++.+++ +.|| ++.++||+|+.-.. +......+|..+...|+|||++++... ...+....++..+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~---~~~~G~~~Av~Ef 258 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDY---MMCPPCKDAVDEY 258 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSC---TTCHHHHHHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCC---CCCHHHHHHHHHH
Confidence 54 256666664 4454 44578999998642 222345789999999999999997633 2234445555443
No 423
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.07 E-value=0.00016 Score=73.06 Aligned_cols=116 Identities=13% Similarity=0.190 Sum_probs=64.6
Q ss_pred ccccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHhh-cccccccccccc--cCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYER-GLFGIYHDWCES--FSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eR-Glig~~~~~ce~--f~typrtyDl~Ha~~~~s 716 (796)
..|||+|||.|.|+..|... .|..+-+.|.--...+..+-.+ ++--+..|.... ++..+.+||+|.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC--
Confidence 47999999999999988754 2333322111000112222222 333344455442 3333578999996433
Q ss_pred cccCCcch-HHHHHhhcccccCCcEEEEeccHH----------HHHHHHHHHhcCCceEEE
Q 003776 717 KIKKRCNL-VAVVAEVDRILRPEGKLIVRDDVE----------TINELESMVKGMQWEVRM 766 (796)
Q Consensus 717 ~~~~rC~~-~~~l~E~DRiLRP~G~~i~rd~~~----------~~~~~~~~~~~l~W~~~~ 766 (796)
.... ..++.++-|+|+|||++++.-... ++.+...++....|++.-
T Consensus 157 ----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 157 ----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 213 (233)
T ss_dssp ----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEE
T ss_pred ----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEE
Confidence 1222 345677999999999999953321 122223555555676644
No 424
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.06 E-value=0.0003 Score=76.72 Aligned_cols=135 Identities=16% Similarity=0.300 Sum_probs=83.0
Q ss_pred ccccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHH----hhcc----cccccccccccCCCCccccc
Q 003776 639 INWSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIY----ERGL----FGIYHDWCESFSTYPRTYDL 708 (796)
Q Consensus 639 i~w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~----eRGl----ig~~~~~ce~f~typrtyDl 708 (796)
..|.....|+|+|||.|.++.+|.+. .+-+.. .|-+..+..+- +.|+ -=+-+|..+++| ..||+
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p---~~~D~ 271 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTL---LERPPVAEEARELLTGRGLADRCEILPGDFFETIP---DGADV 271 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC---SSCSE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEE---EcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC---CCceE
Confidence 35677899999999999999988754 222221 22222333222 2343 223455555544 47999
Q ss_pred cccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------H------------HHHHHHHHHhcCCceE
Q 003776 709 LHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------E------------TINELESMVKGMQWEV 764 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~------------~~~~~~~~~~~l~W~~ 764 (796)
|.+.++|..|... ....+|-++-|+|+|||+++|-+.. + ....++.+++.--|+.
T Consensus 272 v~~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 272 YLIKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEhhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 9988888665421 1235799999999999999985311 0 1345666777777776
Q ss_pred EEeec--cCCceEEEEEe
Q 003776 765 RMTYS--KDKEGLLCVEK 780 (796)
Q Consensus 765 ~~~~~--~~~e~~l~~~K 780 (796)
.-... .....++.++|
T Consensus 351 ~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 351 ERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEECSSSSEEEEEEEE
T ss_pred EEEEECCCCCcEEEEEEe
Confidence 54322 33445666655
No 425
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.05 E-value=0.00018 Score=72.28 Aligned_cols=126 Identities=15% Similarity=0.212 Sum_probs=69.3
Q ss_pred ccccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHh-----hcccccccccccc--cCCCCccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYE-----RGLFGIYHDWCES--FSTYPRTYDLLHAD 712 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~e-----RGlig~~~~~ce~--f~typrtyDl~Ha~ 712 (796)
..|||+|||.|.++..|.+. .|..+-+.| ..+..+.+ .++.-+..|.... +...+.+||+|.++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 47999999999999888643 343332222 11111111 1232233444442 23345689999855
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEeccH---------H--HHHHHHHHHhcCCceEEEe-ec---cCCceEEE
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV---------E--TINELESMVKGMQWEVRMT-YS---KDKEGLLC 777 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~---------~--~~~~~~~~~~~l~W~~~~~-~~---~~~e~~l~ 777 (796)
.. ..-....+|-++-|+|+|||++++.-.. . ....++.+ ..- ++.... +. ....-+++
T Consensus 151 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~ 223 (227)
T 1g8a_A 151 VA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFV 223 (227)
T ss_dssp CC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEE
T ss_pred CC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEE
Confidence 43 1112234589999999999999984111 1 12456666 333 776533 11 12234677
Q ss_pred EEec
Q 003776 778 VEKS 781 (796)
Q Consensus 778 ~~K~ 781 (796)
++|+
T Consensus 224 ~~~~ 227 (227)
T 1g8a_A 224 VRKT 227 (227)
T ss_dssp EECC
T ss_pred EEeC
Confidence 7763
No 426
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.03 E-value=8.3e-05 Score=72.69 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=59.4
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc--cc-cccccccccCCC-Ccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL--FG-IYHDWCESFSTY-PRTYDLLHADHLF 715 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl--ig-~~~~~ce~f~ty-prtyDl~Ha~~~~ 715 (796)
..|||+|||.|.++.++...+.. .|+-+|.. ..+..+-+ .|+ +- +..|+.+..+.+ +.+||+|-++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 46999999999999866655431 22333332 33333222 243 11 223333322223 4789999977655
Q ss_pred ccccCCcchHHHHHhhcc--cccCCcEEEEecc
Q 003776 716 SKIKKRCNLVAVVAEVDR--ILRPEGKLIVRDD 746 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DR--iLRP~G~~i~rd~ 746 (796)
... .-.+..+|-++-| +|+|||++++...
T Consensus 124 ~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 124 NVD--SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred Ccc--hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 432 1346678888888 9999999999643
No 427
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.01 E-value=8.5e-05 Score=75.06 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=61.0
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----cc---cc-cccccccccCCC--Cccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----GL---FG-IYHDWCESFSTY--PRTYDLLH 710 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----Gl---ig-~~~~~ce~f~ty--prtyDl~H 710 (796)
.-+.|||+|||.|.++.+|... |- -.|+-++.. ..+..+-++ |+ |- +..|..+.++.. +.+||+|.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPE--ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3468999999999998888653 10 133334443 444444443 43 22 233444433333 47899998
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
++..+. ....+|-++-|+|||||.+++.+
T Consensus 132 ~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 132 IDAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 665433 45678889999999999999964
No 428
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.00 E-value=0.00025 Score=75.41 Aligned_cols=97 Identities=22% Similarity=0.324 Sum_probs=62.2
Q ss_pred cccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHh----hcccc----cccccccccCCCCcccccccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYE----RGLFG----IYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~e----RGlig----~~~~~ce~f~typrtyDl~Ha 711 (796)
..-..|||+|||.|.++.+|... .. .++-.|-+..+..+-+ .|+-+ +.+|.... .+|..||+|.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEE
Confidence 56678999999999999988754 22 2222232222333222 23322 23344331 34556999999
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.++|..+... ....+|-++-|+|+|||+++|-
T Consensus 239 ~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 239 PNFLHHFDVA-TCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhccCCHH-HHHHHHHHHHHhCCCCcEEEEE
Confidence 8888766321 2357899999999999999885
No 429
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.98 E-value=0.00017 Score=73.32 Aligned_cols=128 Identities=15% Similarity=0.156 Sum_probs=72.3
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHh----hcccc----cccccccccCCCC-----cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYE----RGLFG----IYHDWCESFSTYP-----RT 705 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~e----RGlig----~~~~~ce~f~typ-----rt 705 (796)
.-++|||+|||.|.++.+|... ..-| +-++.. ..+.++-+ .|+-. +..+..+.++.+| .+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v---~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQI---IACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEE---EEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3468999999999998888754 1222 222222 33333322 24321 1223333233222 68
Q ss_pred ccccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHHHHH----HhcCCceEEEeec
Q 003776 706 YDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINELESM----VKGMQWEVRMTYS 769 (796)
Q Consensus 706 yDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~~~~----~~~l~W~~~~~~~ 769 (796)
||+|.++.. .-....++-++-|+|||||++|+.+.. .....++++ ...-++...+..
T Consensus 149 fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp- 221 (232)
T 3cbg_A 149 FDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP- 221 (232)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC-
T ss_pred cCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE-
Confidence 999986543 123456788888999999999985211 122333333 344566665542
Q ss_pred cCCceEEEEEec
Q 003776 770 KDKEGLLCVEKS 781 (796)
Q Consensus 770 ~~~e~~l~~~K~ 781 (796)
-.+++.+++|.
T Consensus 222 -~~dG~~~~~~~ 232 (232)
T 3cbg_A 222 -LGDGMTLALKK 232 (232)
T ss_dssp -SBTCEEEEEEC
T ss_pred -cCCeEEEEEeC
Confidence 23578888874
No 430
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.97 E-value=0.002 Score=62.31 Aligned_cols=84 Identities=13% Similarity=0.096 Sum_probs=58.7
Q ss_pred CCEEEEECCCCc-hhHHHHhh-C--CeEEEeCChhhHHHHHHHHHHHcCCCeEEEEcCCCCCCCCC--CceeEEEEcCCC
Q 003776 390 TRVVLDVGCGVA-SFGGFLFD-R--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG--IVFDAVHCARCR 463 (796)
Q Consensus 390 ~~~VLDIGCGtG-~~a~~La~-~--~V~gvDiSp~dl~~A~~q~A~ergl~~~~~v~d~e~LPfpd--~SFDlVvss~~~ 463 (796)
+.+|||||||.| ..+.+|++ + .|+++|+++..+. +...|..+ |..+ ..||+|++.+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirP- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRP- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESC-
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCC-
Confidence 579999999999 59999986 5 6999999986542 34444433 4332 37999999763
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEeCCCCC
Q 003776 464 VPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQ 496 (796)
Q Consensus 464 l~w~~d~~~~L~Ei~RVLKPGG~fv~s~~~~~~ 496 (796)
..++...|.++.+.+ |.-|+|. ++..+
T Consensus 99 ---P~El~~~i~~lA~~v--~adliI~-pL~~E 125 (153)
T 2k4m_A 99 ---PAEIHSSLMRVADAV--GARLIIK-PLTGE 125 (153)
T ss_dssp ---CTTTHHHHHHHHHHH--TCEEEEE-CBTTB
T ss_pred ---CHHHHHHHHHHHHHc--CCCEEEE-cCCCC
Confidence 346677777777654 5567765 54444
No 431
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.97 E-value=0.00022 Score=73.76 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=55.8
Q ss_pred ccccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHhh-cccccccccccccC--CCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYER-GLFGIYHDWCESFS--TYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eR-Glig~~~~~ce~f~--typrtyDl~Ha~~~~s 716 (796)
-.|||+|||.|+|++.|.+. .|+.+-+.|.--..-+..+-.| .+..+.+|-..+.. ..+..||+|.++..+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 46999999999999887653 3444433221100112223333 35555666555421 224679998866432
Q ss_pred cccCCcchHHHHH-hhcccccCCcEEEEe
Q 003776 717 KIKKRCNLVAVVA-EVDRILRPEGKLIVR 744 (796)
Q Consensus 717 ~~~~rC~~~~~l~-E~DRiLRP~G~~i~r 744 (796)
.....+|+ .+.|+|||||.+++.
T Consensus 157 -----~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 -----PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp -----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 34444554 566799999999985
No 432
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.96 E-value=0.00015 Score=78.45 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=58.2
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhHHH----hhcc---cccccccccccCCCC-ccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPIIY----ERGL---FGIYHDWCESFSTYP-RTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~i~----eRGl---ig~~~~~ce~f~typ-rtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++..|...+. -|.-|=+. ..+..+- ..|+ |-+++.=.+.++ +| ..||+|-+..+
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQS---EILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWM 140 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCC
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChH---HHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCc
Confidence 35799999999999888876642 23333332 2233322 2343 222322122333 34 78999997764
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLI 742 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i 742 (796)
...+...-.+..+|-++.|+|+|||.+|
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3333333345678999999999999998
No 433
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.96 E-value=0.00014 Score=78.01 Aligned_cols=124 Identities=10% Similarity=0.046 Sum_probs=70.0
Q ss_pred ccccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhh----ccccccccccc---ccCCCCccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYER----GLFGIYHDWCE---SFSTYPRTYDLLHAD 712 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eR----Glig~~~~~ce---~f~typrtyDl~Ha~ 712 (796)
.=..|||+|||.|+++|.++.+ .. .|+-+|-. ..+..+-++ |+ .-..-.|. .++ +.+||+|...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~ 195 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVA 195 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEEC
T ss_pred CcCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEEC
Confidence 4467999999999988665322 22 23333332 444444333 55 21111121 233 4899999855
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEeccHHHHH---H-H-HHHHhcCCceEEEeecc--C-CceEEEEEe
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVETIN---E-L-ESMVKGMQWEVRMTYSK--D-KEGLLCVEK 780 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~---~-~-~~~~~~l~W~~~~~~~~--~-~e~~l~~~K 780 (796)
.+ --....++-|+-|+|||||.+++++-...-. . + ..+.+ .|+.....+- + ...+++++|
T Consensus 196 a~------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k 263 (298)
T 3fpf_A 196 AL------AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFK 263 (298)
T ss_dssp TT------CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEE
T ss_pred CC------ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEc
Confidence 43 1235678999999999999999986332100 0 0 11222 5766654322 1 355777766
No 434
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.93 E-value=0.00017 Score=71.84 Aligned_cols=125 Identities=8% Similarity=0.063 Sum_probs=70.5
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc----ccc-ccccccccCCC-Ccc-ccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL----FGI-YHDWCESFSTY-PRT-YDLLHAD 712 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl----ig~-~~~~ce~f~ty-prt-yDl~Ha~ 712 (796)
..|||+|||+|.|+..++.... -.|+-+|.. ..+..+-+ .|+ +-+ ..|.....+.. +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3699999999999887554432 134444444 34443332 233 111 22333322322 468 9999977
Q ss_pred cccccccCCcchHHHHHhh--cccccCCcEEEEeccHHHHHHHHHHHhcCCceEEEeeccCCceEEEEEe
Q 003776 713 HLFSKIKKRCNLVAVVAEV--DRILRPEGKLIVRDDVETINELESMVKGMQWEVRMTYSKDKEGLLCVEK 780 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~--DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~~~~~~~~~e~~l~~~K 780 (796)
..|. .-.+..+|-++ -|+|+|||.+++...... +.. ..-.|.......-+...+.+++|
T Consensus 133 ~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~---~~~--~~~~~~~~~~~~yG~~~~~~~~~ 193 (201)
T 2ift_A 133 PPFH----FNLAEQAISLLCENNWLKPNALIYVETEKDK---PLI--TPENWTLLKEKTTGIVSYRLYQN 193 (201)
T ss_dssp CCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS---CCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCCC---Ccc--ccchhHHHHHHhcCCEEEEEEec
Confidence 6653 12345667777 789999999999755433 111 11347655433334455666655
No 435
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.93 E-value=8.4e-05 Score=78.10 Aligned_cols=96 Identities=11% Similarity=0.146 Sum_probs=55.7
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCC--C-CChhH-HHhhccccc--ccccccccCCCCccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDS--P-DTLPI-IYERGLFGI--YHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~--~-~~l~~-i~eRGlig~--~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
-..|||+|||.|+|+..|..+ .|.-+-+.|... + ..+.. .+..++.-+ -.|.. .|+ +.+||+|-++..+.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~ 151 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGES 151 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCC
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCccc
Confidence 357999999999998887764 566666666311 0 10000 000022112 22332 244 58999999775421
Q ss_pred cccCCcch-----HHHHHhhcccccCCc--EEEEe
Q 003776 717 KIKKRCNL-----VAVVAEVDRILRPEG--KLIVR 744 (796)
Q Consensus 717 ~~~~rC~~-----~~~l~E~DRiLRP~G--~~i~r 744 (796)
...-.+ ..+|-++.|+|+||| .|++.
T Consensus 152 --~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 152 --SPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred --CCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 111111 126788999999999 99985
No 436
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.91 E-value=0.0002 Score=75.25 Aligned_cols=96 Identities=9% Similarity=0.020 Sum_probs=62.4
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhhcc-cccccccccc-c---CCCCcccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYERGL-FGIYHDWCES-F---STYPRTYDLLHADHLFSK 717 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eRGl-ig~~~~~ce~-f---~typrtyDl~Ha~~~~s~ 717 (796)
-..|||+|||.|.++..|..+.- .|+-+|.. .-|.++-++-- ..+-.+|... + ...+.+||+|-++.+|..
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~ 122 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINR 122 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGG
T ss_pred cCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHh
Confidence 35799999999999999877642 34444444 45555544421 0122333221 1 122468999999887765
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+. +-.+..+|-+|-|+| |||.++++
T Consensus 123 ~~-~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 123 FT-TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp SC-HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CC-HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 43 123566899999999 99999997
No 437
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.91 E-value=0.0067 Score=69.77 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=76.0
Q ss_pred HHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhh-----------------CCeEEEeCChhhHHHHHHHHHHHc
Q 003776 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----------------RGVLTMSFAPKDEHEAQVQFALER 433 (796)
Q Consensus 371 ~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~-----------------~~V~gvDiSp~dl~~A~~q~A~er 433 (796)
...+++|.+.+.. ..+.+|+|-.||+|.|.....+ ..+.|+|+.+.....|+..... +
T Consensus 203 ~~Vv~lmv~l~~p----~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l-h 277 (530)
T 3ufb_A 203 RPVVRFMVEVMDP----QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL-H 277 (530)
T ss_dssp HHHHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHhhcc----CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh-c
Confidence 4556777776643 4567999999999998765432 2689999999887777655554 3
Q ss_pred CCC-eEEEEcCCCCCCC----CCCceeEEEEcCCCcc-ccc-------------ch-HHHHHHHHhhcC-------CCcE
Q 003776 434 GIP-AISAVMGTERLPF----PGIVFDAVHCARCRVP-WHI-------------EG-GKLLLELNRVLR-------PGGF 486 (796)
Q Consensus 434 gl~-~~~~v~d~e~LPf----pd~SFDlVvss~~~l~-w~~-------------d~-~~~L~Ei~RVLK-------PGG~ 486 (796)
|+. ..+...+....|+ ....||+|+++..+-. |.. +. ..++..+.+.|| |||+
T Consensus 278 g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr 357 (530)
T 3ufb_A 278 GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGR 357 (530)
T ss_dssp TCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCE
T ss_pred CCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCce
Confidence 443 3444555444332 2357999999874311 100 11 245666778886 7999
Q ss_pred EEEEeC
Q 003776 487 FIWSAT 492 (796)
Q Consensus 487 fv~s~~ 492 (796)
+.+..+
T Consensus 358 ~avVlP 363 (530)
T 3ufb_A 358 AAVVVP 363 (530)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 988755
No 438
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.89 E-value=8.1e-05 Score=73.67 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=57.1
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc--cc-cccccccccCCCCccccccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL--FG-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl--ig-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.-..|||+|||.|.+++.|..... +|+-+|-. ..+..+-++ |+ +- +..|+.+.++. ..+||+|.++..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RAPFDAIIVTAA 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CCCccEEEEccc
Confidence 345799999999999998876532 23333333 344444333 33 11 22344443322 468999998877
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
+..+.. ++-|+|+|||++++.-
T Consensus 153 ~~~~~~---------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 153 PPEIPT---------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp CSSCCT---------HHHHTEEEEEEEEEEE
T ss_pred hhhhhH---------HHHHhcccCcEEEEEE
Confidence 754433 5679999999999864
No 439
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.88 E-value=0.00018 Score=70.10 Aligned_cols=93 Identities=14% Similarity=0.170 Sum_probs=52.5
Q ss_pred ccccccCccccceeeeccCC-------------CeEEEEeecCCCCCChhHHHhhcccccccccccc-c-----CCC-Cc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-------------SVWVMNVISIDSPDTLPIIYERGLFGIYHDWCES-F-----STY-PR 704 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-------------~vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~-f-----~ty-pr 704 (796)
.+|||+|||.|.++.+|... .|+.+-+.|......+.++ . -.|+... + ..+ .+
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcCCC
Confidence 57999999999999888653 2444433332111111111 0 1122111 0 012 25
Q ss_pred cccccccccccccccC--------CcchHHHHHhhcccccCCcEEEEe
Q 003776 705 TYDLLHADHLFSKIKK--------RCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 705 tyDl~Ha~~~~s~~~~--------rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+||+|-++..+..... ...+..+|-++-|+|||||.+++.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 8999987654332111 011246788999999999999997
No 440
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.85 E-value=0.0041 Score=65.17 Aligned_cols=118 Identities=17% Similarity=0.179 Sum_probs=68.3
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHH-cCCCeEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-RGIPAISA 440 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~e-rgl~~~~~ 440 (796)
|+..+..-+..|.+.. .+ +++.+||||||+.|.++.+.+++ .|.|..++. +++..- .... .|+....+
T Consensus 54 yRSRAayKL~EIdeK~-li---kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~-D~~~~P--~~~~~~Gv~~i~~ 126 (269)
T 2px2_A 54 PVSRGTAKLRWLVERR-FV---QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGG-PGHEEP--MLMQSYGWNIVTM 126 (269)
T ss_dssp CSSTHHHHHHHHHHTT-SC---CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCS-TTSCCC--CCCCSTTGGGEEE
T ss_pred cccHHHHHHHHHHHcC-CC---CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcc-ccccCC--CcccCCCceEEEe
Confidence 5555555566676664 32 46899999999999999999886 234555543 210000 0000 12222333
Q ss_pred E-c-CCCCCCCCCCceeEEEEcCCCc--ccccchH---HHHHHHHhhcCCCc-EEEEEeC
Q 003776 441 V-M-GTERLPFPGIVFDAVHCARCRV--PWHIEGG---KLLLELNRVLRPGG-FFIWSAT 492 (796)
Q Consensus 441 v-~-d~e~LPfpd~SFDlVvss~~~l--~w~~d~~---~~L~Ei~RVLKPGG-~fv~s~~ 492 (796)
. . |...++ ...+|+|+|-.+-- ++..|.. .+|.-+.++|+||| -|++-+.
T Consensus 127 ~~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 127 KSGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp ECSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred eccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 3 3 554433 45799999965211 1111322 24555669999999 8987643
No 441
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.81 E-value=0.00046 Score=70.86 Aligned_cols=117 Identities=15% Similarity=0.171 Sum_probs=66.2
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----------hcc--c-ccccccccccC--CCCcccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----------RGL--F-GIYHDWCESFS--TYPRTYD 707 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----------RGl--i-g~~~~~ce~f~--typrtyD 707 (796)
..|||+|||.|.|+.+|... |-+ +|+-+|-. .-|.++-+ .|+ | =+..|....++ ..+.+||
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~--~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDT--LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTS--EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 45999999999999988654 211 22223332 22322221 132 1 12233332233 2257999
Q ss_pred ccccccccc-cc------cCCcchHHHHHhhcccccCCcEEEEe-ccHHHHHHHHHHHhcC-CceEE
Q 003776 708 LLHADHLFS-KI------KKRCNLVAVVAEVDRILRPEGKLIVR-DDVETINELESMVKGM-QWEVR 765 (796)
Q Consensus 708 l~Ha~~~~s-~~------~~rC~~~~~l~E~DRiLRP~G~~i~r-d~~~~~~~~~~~~~~l-~W~~~ 765 (796)
+|+.. |. .| ..|.....+|-++-|+|+|||.|++. |...+...+...+... .|...
T Consensus 126 ~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 126 KMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 98732 22 22 23334467899999999999999985 6666666666655443 35443
No 442
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.78 E-value=0.00012 Score=70.49 Aligned_cols=95 Identities=19% Similarity=0.271 Sum_probs=55.7
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHH----hhcc---cc-cccccccccCCC---Cccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIY----ERGL---FG-IYHDWCESFSTY---PRTYDLLHAD 712 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~----eRGl---ig-~~~~~ce~f~ty---prtyDl~Ha~ 712 (796)
.+|||+|||.|.++.+|...+.. .|+-+|-. ..+..+- ..|+ +- +..|+.+.++.. +..||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 47999999999998877655421 23333332 2333222 2233 22 223454433211 4689999987
Q ss_pred cccccccCCcchHHHHHhh--cccccCCcEEEEec
Q 003776 713 HLFSKIKKRCNLVAVVAEV--DRILRPEGKLIVRD 745 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~--DRiLRP~G~~i~rd 745 (796)
..|.. -....++-.+ -|+|+|||++++..
T Consensus 124 ~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 124 PPYAK----QEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp CCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCc----hhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 66542 1233444444 99999999999963
No 443
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.77 E-value=0.00066 Score=67.95 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=72.5
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHh----hcc---ccc-ccccccccCCCC-----cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYE----RGL---FGI-YHDWCESFSTYP-----RT 705 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~e----RGl---ig~-~~~~ce~f~typ-----rt 705 (796)
.-++|||+|||.|.++.+|... ..-| +-++.. ..+.++-+ .|+ |-+ ..|..+.++..+ .+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRV---VTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEE---EEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEE---EEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 4568999999999999888763 2222 222222 23333322 243 111 123222222222 67
Q ss_pred ccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc------------HHHHHHHHH----HHhcCCceEEEeec
Q 003776 706 YDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD------------VETINELES----MVKGMQWEVRMTYS 769 (796)
Q Consensus 706 yDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~------------~~~~~~~~~----~~~~l~W~~~~~~~ 769 (796)
||+|.++.. ......++-++-|+|||||++++.+. ......+++ +...-++.+.+..
T Consensus 146 ~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp- 218 (229)
T 2avd_A 146 FDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP- 218 (229)
T ss_dssp EEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC-
T ss_pred ccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe-
Confidence 999986543 33445678888899999999999421 112223333 3445556665442
Q ss_pred cCCceEEEEEec
Q 003776 770 KDKEGLLCVEKS 781 (796)
Q Consensus 770 ~~~e~~l~~~K~ 781 (796)
-..++++++|.
T Consensus 219 -~~dGl~~~~k~ 229 (229)
T 2avd_A 219 -LGDGLTLAFKI 229 (229)
T ss_dssp -STTCEEEEEEC
T ss_pred -cCCceEEEEEC
Confidence 24678888873
No 444
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.74 E-value=0.00018 Score=74.08 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=56.5
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHHhhc--ccccccccccccCCCCccccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIYERG--LFGIYHDWCESFSTYPRTYDLLHADHLFSKI 718 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~eRG--lig~~~~~ce~f~typrtyDl~Ha~~~~s~~ 718 (796)
-..|||+|||.|.++..|... .. .|+-+|.. ..+..+-+++ +.=+..|+ +.++.-+.+||+|.+...
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~---- 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA---- 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC----
Confidence 457999999999999888764 22 22233333 4555666655 11122233 233433479999996443
Q ss_pred cCCcchHHHHHhhcccccCCcEEEEec
Q 003776 719 KKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 719 ~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
...|-++-|+|||||.+++..
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEE
T ss_pred ------hhhHHHHHHhcCCCcEEEEEE
Confidence 124789999999999999863
No 445
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.73 E-value=0.00038 Score=75.51 Aligned_cols=95 Identities=12% Similarity=0.125 Sum_probs=60.1
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhHHHh----hcc---ccccc-ccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPIIYE----RGL---FGIYH-DWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~i~e----RGl---ig~~~-~~ce~f~typrtyDl~Ha~~~ 714 (796)
=..|||+|||.|.++..+...+. -|.-|-+. ..+..+-+ .|+ |-+++ |.. .++ .|..||+|-+..+
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s---~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~-~~~~~D~Ivs~~~ 125 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVE-EVS-LPEQVDIIISEPM 125 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTT-TCC-CSSCEEEEEECCC
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCH---HHHHHHHHHHHHcCCCCcEEEEEcchh-hCC-CCCceeEEEEeCc
Confidence 35799999999999888876643 34444432 23333222 244 22222 222 222 3578999998877
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+..+... .+...|.++-|+|+|||.+++.
T Consensus 126 ~~~~~~~-~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYMLFNE-RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTBTTT-SHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcCChH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 6654422 3456678999999999999853
No 446
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.73 E-value=0.00028 Score=72.23 Aligned_cols=114 Identities=11% Similarity=0.149 Sum_probs=63.8
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------------ccc---ccccccccccCC-C-Cc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------------GLF---GIYHDWCESFST-Y-PR 704 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------------Gli---g~~~~~ce~f~t-y-pr 704 (796)
-..|||+|||.|+|+.+|... +- .+|+-+|.. .-+..+-++ |+- -+..|..+.++. + +.
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPE--DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTT--SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCC--CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 356999999999999888653 11 123333333 233333221 431 122333332331 2 35
Q ss_pred cccccccccccc-cc------cCCcchHHHHHhhcccccCCcEEEEe-ccHHHHHHHHHHHhcCC
Q 003776 705 TYDLLHADHLFS-KI------KKRCNLVAVVAEVDRILRPEGKLIVR-DDVETINELESMVKGMQ 761 (796)
Q Consensus 705 tyDl~Ha~~~~s-~~------~~rC~~~~~l~E~DRiLRP~G~~i~r-d~~~~~~~~~~~~~~l~ 761 (796)
+||.|.. +|. .| ..|-....+|-++-|+|+|||++++. |.....+.+...+....
T Consensus 128 ~~d~v~~--~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 128 QLSKMFF--CFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp CEEEEEE--ESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred ccCEEEE--ECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 7777752 122 11 11222257899999999999999984 66666666665554433
No 447
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.71 E-value=0.00017 Score=78.59 Aligned_cols=97 Identities=14% Similarity=0.218 Sum_probs=62.4
Q ss_pred ccccccccccCccccceeeeccCC--CeEEEEeecCCCCCChhHHHh-hcccccccccccccCCCCcccccccccccccc
Q 003776 641 WSTVRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSPDTLPIIYE-RGLFGIYHDWCESFSTYPRTYDLLHADHLFSK 717 (796)
Q Consensus 641 w~~iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~~~l~~i~e-RGlig~~~~~ce~f~typrtyDl~Ha~~~~s~ 717 (796)
+...+.|||+|||.|.++.+|..+ .+-+..+= -+..+..+-+ .++--+.+|..+++ |. ||+|.+.++|-.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D---~~~~~~~a~~~~~v~~~~~d~~~~~---~~-~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFD---LPQVIENAPPLSGIEHVGGDMFASV---PQ-GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCCTTEEEEECCTTTCC---CC-EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeC---hHHHHHhhhhcCCCEEEeCCcccCC---CC-CCEEEEeccccc
Confidence 556789999999999999988654 23222221 1111111100 13333445665544 44 999999888876
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
|... ....+|-++-|+|||||+++|.|
T Consensus 280 ~~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 WSDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 6432 22368999999999999999863
No 448
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.71 E-value=0.00049 Score=72.71 Aligned_cols=129 Identities=16% Similarity=0.232 Sum_probs=79.5
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc---cc-cccccccccCCCCccc---cccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL---FG-IYHDWCESFSTYPRTY---DLLHAD 712 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl---ig-~~~~~ce~f~typrty---Dl~Ha~ 712 (796)
..|||+|||.|.++.+|...|-+ +|+-+|-. ..|.++-+ .|+ +- +..||.++++ ..| |+|-++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivsn 199 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILSN 199 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEEC
T ss_pred CEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEEc
Confidence 46999999999999988765322 23333433 34444332 244 22 3456666554 578 999876
Q ss_pred cccccc----------cC------CcchHHHHHhhc-ccccCCcEEEEeccHHHHHHHHHHHhcCCceEEEeeccCCceE
Q 003776 713 HLFSKI----------KK------RCNLVAVVAEVD-RILRPEGKLIVRDDVETINELESMVKGMQWEVRMTYSKDKEGL 775 (796)
Q Consensus 713 ~~~s~~----------~~------rC~~~~~l~E~D-RiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~~~~~~~~~e~~ 775 (796)
--+... .. .+.-..++-++= |.|+|||++++.-....-..+..+.+.. ....|-.+.+++
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~g~~R~ 276 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSAGKYRF 276 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTTSSEEE
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccCCCceE
Confidence 222211 11 111125778888 9999999999975555556677776655 334455667888
Q ss_pred EEEEec
Q 003776 776 LCVEKS 781 (796)
Q Consensus 776 l~~~K~ 781 (796)
+++.++
T Consensus 277 ~~~~~k 282 (284)
T 1nv8_A 277 LLLNRR 282 (284)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 888765
No 449
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.68 E-value=4.7e-05 Score=77.15 Aligned_cols=94 Identities=18% Similarity=0.204 Sum_probs=59.2
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc---cc-cccccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL---FG-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl---ig-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
-..|||+|||.|+++.+|..... .|+-+|-. ..+..+-+ .|+ +- +..|+.. ++ .+.+||+|.++..
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPP 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCC
T ss_pred CCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCC
Confidence 35799999999999999987652 33334433 33333322 233 21 2234433 22 2479999998877
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
|...... ...+.++-|+|+|||++|+..
T Consensus 154 ~~~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 154 WGGPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CSSGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred cCCcchh---hhHHHHHHhhcCCcceeHHHH
Confidence 7654322 124668999999999988753
No 450
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.68 E-value=0.00049 Score=69.90 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=72.5
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----cccc---c-ccc----------------
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----GLFG---I-YHD---------------- 694 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----Glig---~-~~~---------------- 694 (796)
.-.+|||+|||.|.++..|... .. .|+-++.. ..+..+-++ |+-. + ..|
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 3467999999999999888643 12 22222222 233333222 3311 1 112
Q ss_pred cccccCCCC-ccccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc------------HHHHHH----HHHHH
Q 003776 695 WCESFSTYP-RTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD------------VETINE----LESMV 757 (796)
Q Consensus 695 ~ce~f~typ-rtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~------------~~~~~~----~~~~~ 757 (796)
|-..|+. + .+||+|.++... -.+..+|-++-|+|||||++++.+. ...... .+.+.
T Consensus 137 ~~~~f~~-~~~~fD~I~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 209 (239)
T 2hnk_A 137 WASDFAF-GPSSIDLFFLDADK------ENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVY 209 (239)
T ss_dssp GGTTTCC-STTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHH
T ss_pred ccccccC-CCCCcCEEEEeCCH------HHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHh
Confidence 2222221 2 679999865422 1344678889999999999999641 112222 33344
Q ss_pred hcCCceEEEeeccCCceEEEEEecc
Q 003776 758 KGMQWEVRMTYSKDKEGLLCVEKSM 782 (796)
Q Consensus 758 ~~l~W~~~~~~~~~~e~~l~~~K~~ 782 (796)
..-++.+.... -..++++++|+.
T Consensus 210 ~~~~~~~~~~p--~~~g~~~~~~~~ 232 (239)
T 2hnk_A 210 NDSLVDVSLVP--IADGVSLVRKRL 232 (239)
T ss_dssp HCTTEEEEEEC--STTCEEEEEECC
T ss_pred hCCCeEEEEEE--cCCceEeeeehh
Confidence 55567665542 245799998875
No 451
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.67 E-value=0.00053 Score=69.66 Aligned_cols=128 Identities=16% Similarity=0.133 Sum_probs=72.0
Q ss_pred cccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHH----Hhhccc----cc-ccccccccCCC-Ccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPII----YERGLF----GI-YHDWCESFSTY-PRTYDLLHA 711 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i----~eRGli----g~-~~~~ce~f~ty-prtyDl~Ha 711 (796)
.|||+|||.|.++.+|... .--| +-++.. ..+.++ -..|+- -+ ..|..+.++.+ +.+||+|..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTL---TCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEE---EEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEE---EEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 8999999999988877642 2222 222322 222222 222332 11 22233334444 478999975
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEeccH------------HHHHHHHHHHhcCCceEEEe--eccCCceEEE
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------------ETINELESMVKGMQWEVRMT--YSKDKEGLLC 777 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------------~~~~~~~~~~~~l~W~~~~~--~~~~~e~~l~ 777 (796)
+.-. -....++-++-|+|||||++++.+.. .....++++...+++.-++. --.-.+++++
T Consensus 136 d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~ 209 (221)
T 3dr5_A 136 QVSP------MDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTV 209 (221)
T ss_dssp CCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEE
T ss_pred cCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHH
Confidence 5422 23445677888999999999984221 12334555555555542211 1123568999
Q ss_pred EEecc
Q 003776 778 VEKSM 782 (796)
Q Consensus 778 ~~K~~ 782 (796)
++|..
T Consensus 210 ~~~~~ 214 (221)
T 3dr5_A 210 VTKAL 214 (221)
T ss_dssp EEECC
T ss_pred HHHHH
Confidence 99875
No 452
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.66 E-value=0.0047 Score=67.78 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCC-------CeEEEEcCCCCCC-CCCCcee
Q 003776 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-------PAISAVMGTERLP-FPGIVFD 455 (796)
Q Consensus 388 ~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl-------~~~~~v~d~e~LP-fpd~SFD 455 (796)
.++.+|||+.+|.|.=+.+|+.. .|+++|+++.-+...+ +.+...++ .+.....|...++ +..+.||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~-~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ-KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHH-HHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHH-HHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 46889999999999988888764 6999999987665554 33333332 3445555655543 3457899
Q ss_pred EEEEc-CCCc------------ccccch----------HHHHHHHHhhcCCCcEEEEEeCCCCC
Q 003776 456 AVHCA-RCRV------------PWHIEG----------GKLLLELNRVLRPGGFFIWSATPVYQ 496 (796)
Q Consensus 456 lVvss-~~~l------------~w~~d~----------~~~L~Ei~RVLKPGG~fv~s~~~~~~ 496 (796)
.|++- .|.- .|...+ ..+|....+.|||||+++.++.....
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 99962 2211 111111 25678889999999999999776554
No 453
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.66 E-value=0.0004 Score=70.88 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=68.5
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----ccc----ccccccccccCCCCccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----GLF----GIYHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----Gli----g~~~~~ce~f~typrtyDl~H 710 (796)
.-..|||+|||.|.++.+|... ..-| +-+|-. ..+..+-++ |+- -+..|+.+.|+ +.+||+|-
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v---~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~v~ 167 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRV---VSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVI 167 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEE---EEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEE---EEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC--CCCcCEEE
Confidence 3457999999999999988764 2222 223433 444444443 542 24556776665 36899987
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhcCC
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKGMQ 761 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~l~ 761 (796)
++ --....+|-++-|+|+|||.+++.. ..+.+.++...++...
T Consensus 168 ~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 168 LD--------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp EC--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred EC--------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 42 1223457899999999999999864 3445556666665554
No 454
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.61 E-value=0.00074 Score=69.68 Aligned_cols=93 Identities=12% Similarity=0.128 Sum_probs=55.2
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHH----Hhhcc---cccc-cccccccCCC------Cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPII----YERGL---FGIY-HDWCESFSTY------PR 704 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i----~eRGl---ig~~-~~~ce~f~ty------pr 704 (796)
.-++|||+|||.|.++..|... ..- |+-+|.. ..+.++ -..|+ |-++ .|..+.++.+ +.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~---v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGK---ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCE---EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 4578999999999998877542 222 2222222 223222 22344 2122 2333333333 47
Q ss_pred cccccccccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 705 TYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 705 tyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+||+|.++.- .-....++-++-|+|||||++++.
T Consensus 156 ~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 156 SYDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp CBSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred CEEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 8999986542 113456778888999999999985
No 455
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.60 E-value=0.00037 Score=71.07 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=51.4
Q ss_pred cccccccCccccceeeecc--CCCeEEEEeecCCCC-CCh-hHH---H----hhccccc--ccccccccCC-CCcccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMK--DISVWVMNVISIDSP-DTL-PII---Y----ERGLFGI--YHDWCESFST-YPRTYDLL 709 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~--~~~vwvmnv~p~~~~-~~l-~~i---~----eRGlig~--~~~~ce~f~t-yprtyDl~ 709 (796)
=+.|||+|||.|.++.+|. ....- |+-+|.. ..+ .++ - .+|+-.+ .+.=.+.+|. +...+|.+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~---v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTF---YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEE---EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCE---EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 3569999999999999987 33333 3333433 333 222 2 3454221 1111123332 11344444
Q ss_pred ccccccccc--cCCcchHHHHHhhcccccCCcEEEE
Q 003776 710 HADHLFSKI--KKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 710 Ha~~~~s~~--~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
|....+... ..+-....+|-||-|+|||||.++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 432211100 0011224679999999999999999
No 456
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.57 E-value=0.00074 Score=68.27 Aligned_cols=90 Identities=11% Similarity=0.215 Sum_probs=51.3
Q ss_pred ccccccCccccceeeeccCC-C---eEEEEeecCCCCCChhHHHhh-----ccccccccccccc--CCCCcccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-S---VWVMNVISIDSPDTLPIIYER-----GLFGIYHDWCESF--STYPRTYDLLHADH 713 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~---vwvmnv~p~~~~~~l~~i~eR-----Glig~~~~~ce~f--~typrtyDl~Ha~~ 713 (796)
..|||+|||.|.++..|... + |..+-+.| ..+..+-++ .+.-+..|...+. ..++.+||+|..+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 46999999999999888654 2 33333222 222222111 1222333443321 1224689997611
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEE
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
+ ...-....+|-++-|+|||||++++
T Consensus 151 ~----~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 151 V----AQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp C----CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred c----CChhHHHHHHHHHHHhCCCCcEEEE
Confidence 1 1111135668999999999999999
No 457
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.57 E-value=0.00087 Score=67.69 Aligned_cols=106 Identities=9% Similarity=0.116 Sum_probs=67.7
Q ss_pred cccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc---c-cccccccccc-CCCCcccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL---F-GIYHDWCESF-STYPRTYDLLHADH 713 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl---i-g~~~~~ce~f-~typrtyDl~Ha~~ 713 (796)
-.+|||+|||.|.++.+|.... ..|+-+|-. ..+..+-++ |+ + -+..|+.+.+ + +..||+|-++
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP--EGIFHAAFVD- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC--TTCBSEEEEC-
T ss_pred CCEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC--CCcccEEEEC-
Confidence 3479999999999998887652 244555544 455555444 33 1 1234454443 2 3689998742
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEecc-HHHHHHHHHHHhcCCce
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-VETINELESMVKGMQWE 763 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-~~~~~~~~~~~~~l~W~ 763 (796)
--....+|-++-|+|||||.+++... .+.+..+..+++.. |.
T Consensus 166 -------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 166 -------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp -------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred -------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 11334668889999999999998755 44556666665554 54
No 458
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.56 E-value=0.00083 Score=69.69 Aligned_cols=118 Identities=8% Similarity=0.083 Sum_probs=68.6
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh-------hcc---cccc-cccccccC-----CC-Cc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE-------RGL---FGIY-HDWCESFS-----TY-PR 704 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e-------RGl---ig~~-~~~ce~f~-----ty-pr 704 (796)
-..|||+|||.|.++..|..+ |- ..|+-++-. ..+.++-+ .|+ |-++ .|+.+..+ .+ +.
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 347999999999998777644 11 123333332 22222221 232 2222 23333211 12 47
Q ss_pred cccccccccccccc---------------cCCcchHHHHHhhcccccCCcEEEEeccHHHHHHHHHHHhcCCceE
Q 003776 705 TYDLLHADHLFSKI---------------KKRCNLVAVVAEVDRILRPEGKLIVRDDVETINELESMVKGMQWEV 764 (796)
Q Consensus 705 tyDl~Ha~~~~s~~---------------~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~ 764 (796)
+||+|-++--|... ...+.+..+|-++-|+|+|||++++--..+.+..+..+++.. |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 89999987443321 234667889999999999999998865555666677766653 653
No 459
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.55 E-value=0.0005 Score=68.44 Aligned_cols=126 Identities=10% Similarity=0.091 Sum_probs=69.9
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----hcc--cc-cccccccccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----RGL--FG-IYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----RGl--ig-~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
..|||+|||.|.++..|..+.. -.|+-+|.. ..+..+-+ .|+ |- +..|..+.++..+.+||+|-++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 4699999999999887554432 134445544 33443322 233 21 22344333344356899998766543
Q ss_pred cccCCcchHHHHHhh--cccccCCcEEEEeccHHHHHHHHHHHhcCCceEEEeeccCCceEEEEEe
Q 003776 717 KIKKRCNLVAVVAEV--DRILRPEGKLIVRDDVETINELESMVKGMQWEVRMTYSKDKEGLLCVEK 780 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~--DRiLRP~G~~i~rd~~~~~~~~~~~~~~l~W~~~~~~~~~~e~~l~~~K 780 (796)
. -....++-++ -|+|+|||.+++....... +.. ..-.|.......-+...+.+++|
T Consensus 134 ~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~g~~~~~~~~~ 191 (202)
T 2fpo_A 134 R----GLLEETINLLEDNGWLADEALIYVESEVENG--LPT--VPANWSLHREKVAGQVAYRLYQR 191 (202)
T ss_dssp T----TTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC--SCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred C----CcHHHHHHHHHhcCccCCCcEEEEEECCCcc--ccc--cCCcceEEeeeccCCEEEEEEEE
Confidence 1 1234455555 4679999999997554321 000 11357655443334555666654
No 460
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.54 E-value=0.00013 Score=73.15 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=52.3
Q ss_pred ccccccCccccceeeeccCC--C-eEEEEeecCCCC-CChhHHHhh----c--------ccccccccccccCCCCccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI--S-VWVMNVISIDSP-DTLPIIYER----G--------LFGIYHDWCESFSTYPRTYDL 708 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~--~-vwvmnv~p~~~~-~~l~~i~eR----G--------lig~~~~~ce~f~typrtyDl 708 (796)
..|||+|||.|.+++.|... + .-|. -+|.. ..+..+-++ | +--+..|....++ -+..||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVI---GIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEE---EEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEE---EEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 47999999999999888643 1 2222 22322 233333221 1 1122334443322 1468999
Q ss_pred cccccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 709 LHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
||++..+. .++-++-|+|||||.+++.-
T Consensus 155 i~~~~~~~---------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAP---------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSBBS---------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEECCchH---------HHHHHHHHhcCCCcEEEEEE
Confidence 99776553 23457779999999999863
No 461
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.53 E-value=0.00066 Score=68.98 Aligned_cols=109 Identities=15% Similarity=0.112 Sum_probs=66.2
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh-----cc---cccccccccc-cCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER-----GL---FGIYHDWCES-FSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR-----Gl---ig~~~~~ce~-f~typrtyDl~ 709 (796)
.-.+|||+|||.|.++.+|... ..- |+-+|.. ..+..+-++ |. --+..|..+. |+ +.+||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGL---VESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE--EAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSE---EEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC--TTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCE---EEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--CCCcCEE
Confidence 3457999999999999888654 222 2223332 344444333 41 1123344443 33 2689998
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEeccH-HHHHHHHHHHhcCCceE
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV-ETINELESMVKGMQWEV 764 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-~~~~~~~~~~~~l~W~~ 764 (796)
-++ --....+|-++-|+|+|||++++.... ..+.++...++...|..
T Consensus 171 ~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 842 112346789999999999999987543 34555555555555553
No 462
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.53 E-value=0.00088 Score=68.48 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=72.1
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHH----Hhhccc---cc-ccccccccCCC------Cc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPII----YERGLF---GI-YHDWCESFSTY------PR 704 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i----~eRGli---g~-~~~~ce~f~ty------pr 704 (796)
.-++|||+|||.|..+.+|... .-- |+-++-. ..+.++ -..|+- -+ ..|..+.++.+ +.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~---v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGK---ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCE---EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 4578999999999988777532 111 2222222 223322 223542 12 23444433333 47
Q ss_pred cccccccccccccccCCcchHHHHHhhcccccCCcEEEEeccH-----------------HHHHHHHH----HHhcCCce
Q 003776 705 TYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV-----------------ETINELES----MVKGMQWE 763 (796)
Q Consensus 705 tyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-----------------~~~~~~~~----~~~~l~W~ 763 (796)
+||+|..++- + -....++-++-|+|||||++++.+.. .....|.+ |...=++.
T Consensus 147 ~fD~I~~d~~----~--~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~ 220 (237)
T 3c3y_A 147 SYDFGFVDAD----K--PNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIE 220 (237)
T ss_dssp CEEEEEECSC----G--GGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEE
T ss_pred CcCEEEECCc----h--HHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeE
Confidence 8999986532 1 13456777888999999999985310 01223333 33444555
Q ss_pred EEEeeccCCceEEEEEecc
Q 003776 764 VRMTYSKDKEGLLCVEKSM 782 (796)
Q Consensus 764 ~~~~~~~~~e~~l~~~K~~ 782 (796)
..+.- ...++++++|.+
T Consensus 221 ~~~lp--~~dG~~~~~~~~ 237 (237)
T 3c3y_A 221 IVHLP--LGDGITFCRRLY 237 (237)
T ss_dssp EEEEC--STTCEEEEEECC
T ss_pred EEEEE--eCCceEEEEEcC
Confidence 54431 246799998863
No 463
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.52 E-value=0.00036 Score=75.40 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=64.3
Q ss_pred ccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh----hcccccccccccccCCCCccccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE----RGLFGIYHDWCESFSTYPRTYDLLHADHLFSKI 718 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e----RGlig~~~~~ce~f~typrtyDl~Ha~~~~s~~ 718 (796)
..|||+|||.|.++.+|... |-+ .|+-+|.. .-+..+-+ .|+-..+ -+...++..+.+||+|-++..|...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccC
Confidence 46999999999999888653 211 22223332 22333222 2332111 1222233336899999988877532
Q ss_pred c--CCcchHHHHHhhcccccCCcEEEEeccH--HHHHHHHHHHh
Q 003776 719 K--KRCNLVAVVAEVDRILRPEGKLIVRDDV--ETINELESMVK 758 (796)
Q Consensus 719 ~--~rC~~~~~l~E~DRiLRP~G~~i~rd~~--~~~~~~~~~~~ 758 (796)
. ..-....+|-++-|+|||||.+++-... .+-..++.+..
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC
Confidence 1 1123467899999999999999986332 23344444444
No 464
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.51 E-value=0.029 Score=59.80 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=69.5
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCC-eEEE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISA 440 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~-~~~~ 440 (796)
|...+..-+..+.+... + .++.+||||||++|.|+.+.+.. .|.|+|+-......-+ ..+..+.+ +.+.
T Consensus 75 y~SR~~~KL~ei~~~~~-l---~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~--~~~ql~w~lV~~~ 148 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERRF-L---EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ--LVQSYGWNIVTMK 148 (321)
T ss_dssp CSSTHHHHHHHHHHTTS-C---CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC--CCCBTTGGGEEEE
T ss_pred ccchHHHHHHHHHHhcC-C---CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc--hhhhcCCcceEEE
Confidence 44444444555555532 2 35679999999999999987764 6999999764210000 00011222 2333
Q ss_pred Ec-CCCCCCCCCCceeEEEEcCCCcccccc----hH---HHHHHHHhhcCCC-cEEEEEeCCC
Q 003776 441 VM-GTERLPFPGIVFDAVHCARCRVPWHIE----GG---KLLLELNRVLRPG-GFFIWSATPV 494 (796)
Q Consensus 441 v~-d~e~LPfpd~SFDlVvss~~~l~w~~d----~~---~~L~Ei~RVLKPG-G~fv~s~~~~ 494 (796)
.. |...++- ..+|+|+|-.+ --..+ .. .+|.-+.+.|++| |-|++-+.-+
T Consensus 149 ~~~Dv~~l~~--~~~D~ivcDig--eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 149 SGVDVFYRPS--ECCDTLLCDIG--ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CSCCTTSSCC--CCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred eccCHhhCCC--CCCCEEEEECc--cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 33 4455553 56999999653 11222 22 3556667899999 9998864433
No 465
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.50 E-value=0.00056 Score=74.66 Aligned_cols=95 Identities=12% Similarity=0.191 Sum_probs=62.1
Q ss_pred ccccccccccCccccceeeeccCC----CeEEEEeecCCCCCChhHHHh-hcccccccccccccCCCCcccccccccccc
Q 003776 641 WSTVRNVMDMRSVYGGFAAAMKDI----SVWVMNVISIDSPDTLPIIYE-RGLFGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 641 w~~iRnvmDm~~g~g~faA~l~~~----~vwvmnv~p~~~~~~l~~i~e-RGlig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
+...+.|||+|||.|.++.+|... .+.++-+ |. .+..+-+ .++-=+-+|.-+++| .. |+|.+.+++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~~p---~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PH----VIQDAPAFSGVEHLGGDMFDGVP---KG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HH----HHHhhhhcCCCEEEecCCCCCCC---CC-CEEEEechh
Confidence 667899999999999999998652 2333332 21 1111111 123233456555554 44 999988888
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
-.|... ....+|-++-|+|||||+++|-|
T Consensus 272 h~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWSDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 777532 23457999999999999999853
No 466
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.46 E-value=0.00061 Score=74.34 Aligned_cols=95 Identities=11% Similarity=0.172 Sum_probs=62.7
Q ss_pred ccccccccccCccccceeeeccCC----CeEEEEeecCCCCCChhHHHh-hcccccccccccccCCCCcccccccccccc
Q 003776 641 WSTVRNVMDMRSVYGGFAAAMKDI----SVWVMNVISIDSPDTLPIIYE-RGLFGIYHDWCESFSTYPRTYDLLHADHLF 715 (796)
Q Consensus 641 w~~iRnvmDm~~g~g~faA~l~~~----~vwvmnv~p~~~~~~l~~i~e-RGlig~~~~~ce~f~typrtyDl~Ha~~~~ 715 (796)
+...+.|||+|||.|.++.+|... .+.++-+ | ..+..+-. .++-=+-+|..+++| .. |+|.+.+++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~D~~~~~p---~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P----HVISEAPQFPGVTHVGGDMFKEVP---SG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H----HHHHhhhhcCCeEEEeCCcCCCCC---CC-CEEEehHHh
Confidence 667899999999999999998652 2333333 2 11111111 123334456655555 33 999988888
Q ss_pred ccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 716 SKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 716 s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
-.|... ....+|-++-|+|||||+++|-|
T Consensus 270 h~~~d~-~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWSDQ-HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 777532 23467999999999999999853
No 467
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.45 E-value=0.0074 Score=62.57 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=71.2
Q ss_pred ccccHHHHHHHHHHhCcccccCCCCCEEEEECCCCchhHHHHhhC----CeEEEeCChhhHHHHHHHHHHHcCCCeE-EE
Q 003776 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAI-SA 440 (796)
Q Consensus 366 F~~~a~~yid~L~e~Lp~i~~~~~~~~VLDIGCGtG~~a~~La~~----~V~gvDiSp~dl~~A~~q~A~ergl~~~-~~ 440 (796)
|...+..-+..|.+.. .+ .++.+||||||++|.++.+.+.. .|.++|+-+.....- +..+..|.+.. +.
T Consensus 59 yrSRa~~KL~ei~ek~-~l---~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P--~~~~s~gwn~v~fk 132 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERN-MV---IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP--VPMSTYGWNIVKLM 132 (267)
T ss_dssp CSSTHHHHHHHHHHTT-SS---CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC--CCCCCTTTTSEEEE
T ss_pred ccchHHHHHHHHHHhc-CC---CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc--chhhhcCcCceEEE
Confidence 3444444455666665 33 35779999999999999987764 799999976432100 00112344444 34
Q ss_pred Ec-CCCCCCCCCCceeEEEEcCCCcccccch----H---HHHHHHHhhcCCCcEEEEEeCCCC
Q 003776 441 VM-GTERLPFPGIVFDAVHCARCRVPWHIEG----G---KLLLELNRVLRPGGFFIWSATPVY 495 (796)
Q Consensus 441 v~-d~e~LPfpd~SFDlVvss~~~l~w~~d~----~---~~L~Ei~RVLKPGG~fv~s~~~~~ 495 (796)
.. |...++ ...+|.|+|-.+ .-..++ . .+|.-+.+.|++ |-|++-+.-+|
T Consensus 133 ~gvDv~~~~--~~~~DtllcDIg--eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 133 SGKDVFYLP--PEKCDTLLCDIG--ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp CSCCGGGCC--CCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred eccceeecC--CccccEEEEecC--CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 34 444444 256999999653 222222 2 355666799999 78887644333
No 468
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.44 E-value=0.0011 Score=69.33 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=64.2
Q ss_pred cccccccCccccceeeeccCC----CeEEEEeecCCCCCChhHHH----hhcc---cccccccccccCCCCccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI----SVWVMNVISIDSPDTLPIIY----ERGL---FGIYHDWCESFSTYPRTYDLLHAD 712 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~----~vwvmnv~p~~~~~~l~~i~----eRGl---ig~~~~~ce~f~typrtyDl~Ha~ 712 (796)
=.+|||+|||+|+|+..|... .|+.+-+.| .-+..+- ..|+ .-+..|..+ ++. +.+||+|-++
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~-~~~-~~~~D~Vi~d 193 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRD-VEL-KDVADRVIMG 193 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGG-CCC-TTCEEEEEEC
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHH-cCc-cCCceEEEEC
Confidence 357999999999999888654 233332221 2222221 2233 222233332 222 5689999765
Q ss_pred cccccccCCcchHHHHHhhcccccCCcEEEEeccH------HHH-HHHHHHHhcCCceEE
Q 003776 713 HLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDV------ETI-NELESMVKGMQWEVR 765 (796)
Q Consensus 713 ~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~------~~~-~~~~~~~~~l~W~~~ 765 (796)
... .+..+|.++-|+|+|||.+++.... +.. ..++.+...+.+++.
T Consensus 194 ~p~-------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 194 YVH-------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp CCS-------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred Ccc-------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 433 4566788889999999999997443 233 335555555555544
No 469
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.44 E-value=0.00041 Score=69.05 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=64.9
Q ss_pred cccccccCccccceeeeccCC--CeEEEEeecCCCC-CChhHHH--------hhccc--cc-ccccccccCCCCcccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI--SVWVMNVISIDSP-DTLPIIY--------ERGLF--GI-YHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~--~vwvmnv~p~~~~-~~l~~i~--------eRGli--g~-~~~~ce~f~typrtyDl~ 709 (796)
-..|||+|||.|.++.+|... ..-| +-+|-. ..|..+. .+|+- -+ ..|. +.++..+.+ |.+
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v---~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~-d~v 102 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLV---VALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA-ERLPPLSGV-GEL 102 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEE---EEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS-TTCCSCCCE-EEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEE---EEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch-hhCCCCCCC-CEE
Confidence 346999999999999998765 3333 333333 3343221 34431 11 2232 234433344 666
Q ss_pred ccccccccccCC-----cchHHHHHhhcccccCCcEEEEec------------------cHH-HHHHHHHHHhcCCceEE
Q 003776 710 HADHLFSKIKKR-----CNLVAVVAEVDRILRPEGKLIVRD------------------DVE-TINELESMVKGMQWEVR 765 (796)
Q Consensus 710 Ha~~~~s~~~~r-----C~~~~~l~E~DRiLRP~G~~i~rd------------------~~~-~~~~~~~~~~~l~W~~~ 765 (796)
+ .+|+ ++.. -....+|-++-|+|||||.+++.- ... ....+..++..--|++.
T Consensus 103 ~--~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 103 H--VLMP-WGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp E--EESC-CHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred E--EEcc-chhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 6 2222 1100 001577999999999999999852 112 23347777777788765
Q ss_pred E
Q 003776 766 M 766 (796)
Q Consensus 766 ~ 766 (796)
-
T Consensus 180 ~ 180 (218)
T 3mq2_A 180 D 180 (218)
T ss_dssp E
T ss_pred e
Confidence 4
No 470
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.44 E-value=0.0015 Score=62.91 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=53.3
Q ss_pred CccccccccccccccccCCcchHHHHHhhcccccCCcEEEEeccHH----------HHHHHHHHHhcCCceEEEeecc--
Q 003776 703 PRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVE----------TINELESMVKGMQWEVRMTYSK-- 770 (796)
Q Consensus 703 prtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~----------~~~~~~~~~~~l~W~~~~~~~~-- 770 (796)
+.+||+|.+..+|.... .....+|-|+-|+|||||++++..... ....+..+++.--+ +.+....
T Consensus 61 ~~~fD~V~~~~~l~~~~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~ 137 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT--LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQRE 137 (176)
T ss_dssp SSCEEEEEECCSTTCCC--CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEE
T ss_pred CCCEeEEEECChhhhcc--cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCccc
Confidence 57999999877776541 235788999999999999999953211 14556666654444 3332100
Q ss_pred --------------C---C---ceEEEEEecccCCCc
Q 003776 771 --------------D---K---EGLLCVEKSMWRPKE 787 (796)
Q Consensus 771 --------------~---~---e~~l~~~K~~w~~~~ 787 (796)
+ . --+++++|+-|..+.
T Consensus 138 ~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~gs 174 (176)
T 2ld4_A 138 PLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGS 174 (176)
T ss_dssp CCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSCCS
T ss_pred CCCHHHHHHHHHHhcccCCceEEEEEeccCCcccccC
Confidence 0 1 237889999886554
No 471
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.43 E-value=0.00051 Score=70.28 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=31.4
Q ss_pred ccccccccccccccccC------CcchHHHHHhhcccccCCcEEEEeccH
Q 003776 704 RTYDLLHADHLFSKIKK------RCNLVAVVAEVDRILRPEGKLIVRDDV 747 (796)
Q Consensus 704 rtyDl~Ha~~~~s~~~~------rC~~~~~l~E~DRiLRP~G~~i~rd~~ 747 (796)
..||+|-++..|..... .-.+..+|-++-|+|+|||++++.+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999998765543222 123457788999999999999996443
No 472
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.42 E-value=0.00065 Score=73.34 Aligned_cols=96 Identities=11% Similarity=0.173 Sum_probs=63.9
Q ss_pred cccccccccccCccccceeeeccCC----CeEEEEeecCCCCCChhHHHh-hcccccccccccccCCCCccccccccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI----SVWVMNVISIDSPDTLPIIYE-RGLFGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~----~vwvmnv~p~~~~~~l~~i~e-RGlig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.+.....|||+|||.|.++.+|... .|.++-+ |. .+..+-+ .++-=+.+|..+++| . ||+|.+.++
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~~p---~-~D~v~~~~~ 255 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQ----VVENLSGSNNLTYVGGDMFTSIP---N-ADAVLLKYI 255 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCBTTEEEEECCTTTCCC---C-CSEEEEESC
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HH----HHhhcccCCCcEEEeccccCCCC---C-ccEEEeehh
Confidence 4566789999999999999998743 2444433 21 1111100 123334456555444 3 999999998
Q ss_pred cccccCCcchHHHHHhhcccccC---CcEEEEec
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRP---EGKLIVRD 745 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP---~G~~i~rd 745 (796)
|-.|... ....+|-++-|+||| ||+++|.|
T Consensus 256 lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 256 LHNWTDK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp GGGSCHH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred hccCCHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8877532 223689999999999 99999863
No 473
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.38 E-value=0.00042 Score=77.16 Aligned_cols=142 Identities=18% Similarity=0.275 Sum_probs=84.2
Q ss_pred ccccccccCcc------ccceeeeccCC-----CeEEEEeecCCCCCChhHHHhhcccccccccccccCCC------Ccc
Q 003776 643 TVRNVMDMRSV------YGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYERGLFGIYHDWCESFSTY------PRT 705 (796)
Q Consensus 643 ~iRnvmDm~~g------~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eRGlig~~~~~ce~f~ty------prt 705 (796)
.-.+|||+||| .||....|... .|..+-+.|.- . .....+-=+..|.. .+++- +.+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa~-dlpf~~~l~~~d~s 288 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQN-DAEFLDRIARRYGP 288 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCTT-CHHHHHHHHHHHCC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEeccc-ccchhhhhhcccCC
Confidence 35689999999 77776666532 34444443331 1 11111211223322 22221 378
Q ss_pred ccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc------------------HHHHHHHHHHHhcCCceEEEe
Q 003776 706 YDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD------------------VETINELESMVKGMQWEVRMT 767 (796)
Q Consensus 706 yDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~------------------~~~~~~~~~~~~~l~W~~~~~ 767 (796)
||+|.+++.. + -......|-|+=|+|||||++|+.|. ..+++.++.+...+.|.-...
T Consensus 289 FDlVisdgsH--~--~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~~~~ 364 (419)
T 3sso_A 289 FDIVIDDGSH--I--NAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQELPS 364 (419)
T ss_dssp EEEEEECSCC--C--HHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGGSCC
T ss_pred ccEEEECCcc--c--chhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccccCC
Confidence 9999976532 1 12356779999999999999999633 247888999998887753221
Q ss_pred ecc------C--------CceEEEEEe--------cccCCCchhhhHHhh
Q 003776 768 YSK------D--------KEGLLCVEK--------SMWRPKELETIKYAI 795 (796)
Q Consensus 768 ~~~------~--------~e~~l~~~K--------~~w~~~~~~~~~~~~ 795 (796)
... + -..|++..| +.|.|-..+.+--||
T Consensus 365 ~~~~~~~~~~~~~~~~h~y~~i~~~~kg~n~e~~~p~~~~~~~~~~~~~~ 414 (419)
T 3sso_A 365 DPNRSPGYVDRNIVGLHVYHNVAFVEKGRNDEGGIPTWIPRDFESLVQAS 414 (419)
T ss_dssp CTTCCCCHHHHHEEEEEEETTEEEEEESCCCSCCCCTTSCSBHHHHHHHH
T ss_pred CcCCCCCccccceeEEEecCcEEEEEecccCCCCCCCCcccchhhhhccc
Confidence 100 0 124777777 468887776665554
No 474
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.37 E-value=0.00078 Score=71.18 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=55.0
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC---CChhH-HHhhccccc--ccccccccCCCCccccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP---DTLPI-IYERGLFGI--YHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~---~~l~~-i~eRGlig~--~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
-..|||+|||.|+|+..|..+ .|.-+-+.|.... ..+.. .+.-++.-+ -.|.. .|+ +.+||+|-++..+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVT-KME--PFQADTVLCDIGES 159 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGG-GCC--CCCCSEEEECCCCC
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHh-hCC--CCCcCEEEECCCcC
Confidence 357999999999998888765 5666656553110 00000 000011111 22332 244 58999998765421
Q ss_pred cccCCcch-----HHHHHhhcccccCCc--EEEEe
Q 003776 717 KIKKRCNL-----VAVVAEVDRILRPEG--KLIVR 744 (796)
Q Consensus 717 ~~~~rC~~-----~~~l~E~DRiLRP~G--~~i~r 744 (796)
...-.+ ..+|-++.|+|+||| .|++.
T Consensus 160 --~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 --NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred --CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 111111 126788999999999 99885
No 475
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.25 E-value=0.0016 Score=68.59 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=72.8
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh-----cc-----------ccc-ccccccccCCCCc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER-----GL-----------FGI-YHDWCESFSTYPR 704 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR-----Gl-----------ig~-~~~~ce~f~typr 704 (796)
.-++|||+|||.|+++..|...++ ..|+-++-. .-+.++-++ |+ +-+ ..|..+-++. +.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 346899999999999999987753 123333322 222222221 22 111 1222221222 57
Q ss_pred cccccccccccccccCCcc--hHHHHHhhcccccCCcEEEEec-----cHHHHHHHHHHHhcCCceEEEee----c-cCC
Q 003776 705 TYDLLHADHLFSKIKKRCN--LVAVVAEVDRILRPEGKLIVRD-----DVETINELESMVKGMQWEVRMTY----S-KDK 772 (796)
Q Consensus 705 tyDl~Ha~~~~s~~~~rC~--~~~~l~E~DRiLRP~G~~i~rd-----~~~~~~~~~~~~~~l~W~~~~~~----~-~~~ 772 (796)
+||+|-++... .+...-. ...++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.... . .+.
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~ 230 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASP 230 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSS
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCce
Confidence 89999976432 2221111 2467888999999999999852 23344444444433323333321 1 234
Q ss_pred ceEEEEEec
Q 003776 773 EGLLCVEKS 781 (796)
Q Consensus 773 e~~l~~~K~ 781 (796)
-.++++.|.
T Consensus 231 ~~~~~as~~ 239 (281)
T 1mjf_A 231 WAFLVGVKG 239 (281)
T ss_dssp EEEEEEEES
T ss_pred EEEEEeeCC
Confidence 468888886
No 476
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.22 E-value=0.0004 Score=68.88 Aligned_cols=88 Identities=23% Similarity=0.224 Sum_probs=54.3
Q ss_pred ccccccCccccceeeeccCCC---eEEEEeecCCCC-CChhHHHhh----cc--c-ccccccccccCCCCcccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDIS---VWVMNVISIDSP-DTLPIIYER----GL--F-GIYHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~---vwvmnv~p~~~~-~~l~~i~eR----Gl--i-g~~~~~ce~f~typrtyDl~Ha~~ 713 (796)
..|||+|||.|.+++.|...- .- |+-++.. ..+..+-++ |+ + -+..|..+.++. +..||+|.+..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGL---VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-LAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSE---EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG-GCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC-CCCeeEEEECC
Confidence 479999999999998886531 22 2222322 344444333 32 1 122344343331 36899999887
Q ss_pred ccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 714 LFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 714 ~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
.+.... -++-|+|||||.+++.-
T Consensus 155 ~~~~~~---------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 155 AGPKIP---------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp BBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred chHHHH---------HHHHHHcCCCcEEEEEE
Confidence 765432 27789999999999864
No 477
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.22 E-value=0.00034 Score=70.42 Aligned_cols=87 Identities=16% Similarity=0.180 Sum_probs=53.3
Q ss_pred ccccccCccccceeeeccCC----------CeEEEEeecCCCCCChhHHHhh----c--------ccccccccccccCCC
Q 003776 645 RNVMDMRSVYGGFAAAMKDI----------SVWVMNVISIDSPDTLPIIYER----G--------LFGIYHDWCESFSTY 702 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~----------~vwvmnv~p~~~~~~l~~i~eR----G--------lig~~~~~ce~f~ty 702 (796)
..|||+|||.|.+++.|... .|..+-+.| ..+..+-++ | +--+..|....++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 36999999999999988652 233332211 233332222 2 11233444444442
Q ss_pred CccccccccccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 703 PRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 703 prtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
...||+|++...+.. ++-++-|+|+|||.+++.-
T Consensus 161 ~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD---------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCchHH---------HHHHHHHHhcCCCEEEEEE
Confidence 268999997766542 3367789999999999863
No 478
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.19 E-value=0.0022 Score=68.07 Aligned_cols=136 Identities=11% Similarity=0.063 Sum_probs=72.3
Q ss_pred cccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------cc----cc-cccccccccCCCCccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------GL----FG-IYHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------Gl----ig-~~~~~ce~f~typrtyDl~H 710 (796)
-++|||+|||.|+++..|..+ ++. .|+-++-. .-+.++-++ |+ +- +..|.....+..+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 478999999999999999877 432 23333332 223322221 21 11 12233222333467899998
Q ss_pred ccccccc-ccCCc--chHHHHHhhcccccCCcEEEEec-----cHHHHHHHHHHHhcCCceEEEee------ccCCceEE
Q 003776 711 ADHLFSK-IKKRC--NLVAVVAEVDRILRPEGKLIVRD-----DVETINELESMVKGMQWEVRMTY------SKDKEGLL 776 (796)
Q Consensus 711 a~~~~s~-~~~rC--~~~~~l~E~DRiLRP~G~~i~rd-----~~~~~~~~~~~~~~l~W~~~~~~------~~~~e~~l 776 (796)
++. +.. ....- ....++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+.... ..+.-.++
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEE
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEE
Confidence 653 222 11100 11567889999999999999962 12333333333322222333221 12345688
Q ss_pred EEEecc
Q 003776 777 CVEKSM 782 (796)
Q Consensus 777 ~~~K~~ 782 (796)
+|.|.+
T Consensus 248 ~as~~~ 253 (296)
T 1inl_A 248 FASKGI 253 (296)
T ss_dssp EEESSC
T ss_pred EecCCC
Confidence 899874
No 479
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.19 E-value=0.0019 Score=67.12 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=67.8
Q ss_pred cccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----cc----cccccccccccCCCCcccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----GL----FGIYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----Gl----ig~~~~~ce~f~typrtyDl~Ha 711 (796)
-.+|||+|||.|.++.+|... .. .|+-++.. ..+..+-++ |+ --+..|+.+.|+ +..||+|-+
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~V~~ 187 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSG---KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD--EKDVDALFL 187 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTC---EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--CCSEEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--CCccCEEEE
Confidence 347999999999999888654 22 33344443 445544443 43 223345555443 267999874
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEecc-HHHHHHHHHHHhcCCceE
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD-VETINELESMVKGMQWEV 764 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~-~~~~~~~~~~~~~l~W~~ 764 (796)
+- -....+|-++-|+|+|||.+++... ...+.++...++...|..
T Consensus 188 ~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 188 DV--------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp CC--------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred CC--------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 21 1223678889999999999999755 345566666666566654
No 480
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.16 E-value=0.00038 Score=72.05 Aligned_cols=94 Identities=21% Similarity=0.208 Sum_probs=58.8
Q ss_pred cccccCccccceeeeccCC-----CeEEEEeecCCCCCChhHHHhhc-cccccccccccc--CCCCcccccccccccccc
Q 003776 646 NVMDMRSVYGGFAAAMKDI-----SVWVMNVISIDSPDTLPIIYERG-LFGIYHDWCESF--STYPRTYDLLHADHLFSK 717 (796)
Q Consensus 646 nvmDm~~g~g~faA~l~~~-----~vwvmnv~p~~~~~~l~~i~eRG-lig~~~~~ce~f--~typrtyDl~Ha~~~~s~ 717 (796)
.|||+|||.|.|+.+|.+. .|+.+.+.|.--..-...+-+|+ +..+..+-+.+- +..+.++|+|.++-.+.
T Consensus 80 ~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~- 158 (233)
T 4df3_A 80 RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQP- 158 (233)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCT-
T ss_pred EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccCC-
Confidence 6999999999999999753 36666554432111122233444 555666655432 33346788776432111
Q ss_pred ccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 718 IKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 718 ~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
=....+|.++-|+|+|||.++|.
T Consensus 159 ----~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 159 ----EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ----THHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hhHHHHHHHHHHhccCCCEEEEE
Confidence 12345789999999999999985
No 481
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.15 E-value=0.0011 Score=69.00 Aligned_cols=109 Identities=10% Similarity=0.088 Sum_probs=67.8
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh-----cc---cccccccccccCCCCccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER-----GL---FGIYHDWCESFSTYPRTYDLLH 710 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR-----Gl---ig~~~~~ce~f~typrtyDl~H 710 (796)
.-.+|||+|||.|+++..|... .. .|+-+|.. ..+..+-++ |+ --+..|+.++++ +.+||+|-
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi 184 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVI 184 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEE
Confidence 4457999999999999888754 22 23333433 344444333 42 112345555444 36899987
Q ss_pred cccccccccCCcchHHHHHhhcccccCCcEEEEeccHH-HHHHHHHHHhcCCceE
Q 003776 711 ADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDDVE-TINELESMVKGMQWEV 764 (796)
Q Consensus 711 a~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~~-~~~~~~~~~~~l~W~~ 764 (796)
++ + -....+|-++-|+|+|||++++..... ....+...++...|..
T Consensus 185 ~~-~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 185 AD-I-------PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp EC-C-------SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred Ec-C-------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 52 1 123467889999999999999976543 4555555555555554
No 482
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.12 E-value=0.0014 Score=70.24 Aligned_cols=115 Identities=14% Similarity=0.152 Sum_probs=64.0
Q ss_pred ccccccCccccceeeeccCC--C-eEEEEeecCCCC-CChhHHHhh----cc--ccc-ccccccccCCCCcccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDI--S-VWVMNVISIDSP-DTLPIIYER----GL--FGI-YHDWCESFSTYPRTYDLLHADH 713 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~--~-vwvmnv~p~~~~-~~l~~i~eR----Gl--ig~-~~~~ce~f~typrtyDl~Ha~~ 713 (796)
..|||+|||.|+++.+|... + -- |+-+|-. ..+..+-++ |+ |-+ .+|. ..++.++..||+|-++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~---v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGV---IYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDA 195 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSE---EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCE---EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeC
Confidence 46999999999999888642 1 11 2333433 334444333 44 112 2233 23343467899998753
Q ss_pred cccccc--CC----------cc-------hHHHHHhhcccccCCcEEEEec----cHHHHHHHHHHHhcCCce
Q 003776 714 LFSKIK--KR----------CN-------LVAVVAEVDRILRPEGKLIVRD----DVETINELESMVKGMQWE 763 (796)
Q Consensus 714 ~~s~~~--~r----------C~-------~~~~l~E~DRiLRP~G~~i~rd----~~~~~~~~~~~~~~l~W~ 763 (796)
-.|... .+ -. ...+|-++-|+|||||.+|+.. ..+.-..|+.+++...++
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 322110 00 00 1477889999999999999952 112233455555554443
No 483
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.08 E-value=0.00067 Score=77.12 Aligned_cols=94 Identities=12% Similarity=0.158 Sum_probs=58.3
Q ss_pred cccccccCccccceeeeccCCCe-EEEEeecCCCCCChhH----HHhhcc---ccc-ccccccccCCCCccccccccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDISV-WVMNVISIDSPDTLPI----IYERGL---FGI-YHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~~v-wvmnv~p~~~~~~l~~----i~eRGl---ig~-~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
-..|||+|||.|.++..|...+. -|.-|-+ ...+.+ +...|| |-+ ..|+.+ + .+|..||+|-+..+
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~---s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEA---STMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPM 233 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCC
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEc---HHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCc
Confidence 35799999999999988876643 2332322 222322 333354 222 234433 2 24578999998766
Q ss_pred cccccCCcchHHHHHhhcccccCCcEEEE
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRPEGKLIV 743 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP~G~~i~ 743 (796)
+..+... .+..+|.++-|+|+|||++++
T Consensus 234 ~~~~~~e-~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNE-RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCH-HHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcH-HHHHHHHHHHHhcCCCCEEEE
Confidence 5443221 345567799999999999985
No 484
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.06 E-value=0.002 Score=68.56 Aligned_cols=137 Identities=17% Similarity=0.156 Sum_probs=73.5
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------cc----cc-cccccccccCC-CCccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------GL----FG-IYHDWCESFST-YPRTYDL 708 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------Gl----ig-~~~~~ce~f~t-yprtyDl 708 (796)
.-+.|||+|||.|+++..|... ++- .|+-++-. .-+.++-++ ++ +- +..|...-... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3478999999999999999876 332 22222322 222222221 11 11 22333222111 2578999
Q ss_pred cccccccccccCCcch-HHHHHhhcccccCCcEEEEecc-----HHHHHHHHHHHhcCCceE-EEee------ccCCceE
Q 003776 709 LHADHLFSKIKKRCNL-VAVVAEVDRILRPEGKLIVRDD-----VETINELESMVKGMQWEV-RMTY------SKDKEGL 775 (796)
Q Consensus 709 ~Ha~~~~s~~~~rC~~-~~~l~E~DRiLRP~G~~i~rd~-----~~~~~~~~~~~~~l~W~~-~~~~------~~~~e~~ 775 (796)
|-++.........-.. ..++-++-|+|+|||.+++... ......+.+.++..-+.. .... ..+.-.+
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f 252 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGT 252 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEE
Confidence 9976433221111111 4678899999999999999522 234555555555544433 2221 1234468
Q ss_pred EEEEec
Q 003776 776 LCVEKS 781 (796)
Q Consensus 776 l~~~K~ 781 (796)
+++.|.
T Consensus 253 ~~as~~ 258 (304)
T 3bwc_A 253 LVCSKK 258 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 888886
No 485
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.05 E-value=0.0046 Score=65.77 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=57.0
Q ss_pred cccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------------cccccccccccccCCCCcccc
Q 003776 642 STVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------------GLFGIYHDWCESFSTYPRTYD 707 (796)
Q Consensus 642 ~~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------------Glig~~~~~ce~f~typrtyD 707 (796)
..-++|||+|||.|+++..|... ++. .|+-++-. .-+.++-++ .+-=+..|..+.+...+.+||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 35689999999999999998876 343 23333332 333332221 111123344443343457899
Q ss_pred ccccccccccccCC--cchHHHHHhhcccccCCcEEEEe
Q 003776 708 LLHADHLFSKIKKR--CNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 708 l~Ha~~~~s~~~~r--C~~~~~l~E~DRiLRP~G~~i~r 744 (796)
+|-++.. ..+... .-...++-++-|+|+|||.+++.
T Consensus 160 vIi~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 160 VIISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEECC-----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 9987532 222211 11156788999999999999995
No 486
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.02 E-value=0.002 Score=77.28 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=62.3
Q ss_pred ccccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHh----------hcc--cccccccccccCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYE----------RGL--FGIYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~e----------RGl--ig~~~~~ce~f~typrtyDl~ 709 (796)
.-..|||+|||.|.|+.+|....--.-.|+-+|-. ..|..+-+ +|+ |-+++.=-+.++..+.+||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 34579999999999999998763000123333333 34444433 143 222221123355556899999
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
.+..+|..+.. =....+|-+|-|+|||| ++||.
T Consensus 801 V~~eVLeHL~d-p~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 801 TCLEVIEHMEE-DQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EEESCGGGSCH-HHHHHHHHHHHHTTCCS-EEEEE
T ss_pred EEeCchhhCCh-HHHHHHHHHHHHHcCCC-EEEEE
Confidence 99888876543 12335788999999999 77775
No 487
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.99 E-value=0.0028 Score=68.17 Aligned_cols=137 Identities=20% Similarity=0.238 Sum_probs=76.8
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------cc----cc-cccccccccCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------GL----FG-IYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------Gl----ig-~~~~~ce~f~typrtyDl~ 709 (796)
.-++|||+|||.|+++.+|... ++. .|+-++-. .-+.++-++ |+ +- +..|+.+.++..+.+||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVE--NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 3478999999999999999876 332 23333332 233333221 11 11 2334433333336789999
Q ss_pred ccccccccccCCcch--HHHHHhhcccccCCcEEEEec-----cHHHHHHHHHHHhcCCceEEEee------ccCCceEE
Q 003776 710 HADHLFSKIKKRCNL--VAVVAEVDRILRPEGKLIVRD-----DVETINELESMVKGMQWEVRMTY------SKDKEGLL 776 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~--~~~l~E~DRiLRP~G~~i~rd-----~~~~~~~~~~~~~~l~W~~~~~~------~~~~e~~l 776 (796)
-++. +..+...-.+ ..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.... ..+.-.++
T Consensus 194 i~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~ 272 (321)
T 2pt6_A 194 IVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGIL 272 (321)
T ss_dssp EEEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEE
T ss_pred EECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEE
Confidence 8754 2222111111 567889999999999999952 23344455544444434443321 11223478
Q ss_pred EEEecc
Q 003776 777 CVEKSM 782 (796)
Q Consensus 777 ~~~K~~ 782 (796)
++.|.+
T Consensus 273 ~as~~~ 278 (321)
T 2pt6_A 273 CCSKTD 278 (321)
T ss_dssp EEESST
T ss_pred EeeCCC
Confidence 888875
No 488
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.99 E-value=0.0016 Score=70.41 Aligned_cols=118 Identities=17% Similarity=0.165 Sum_probs=66.9
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cc----cccc-cccccccCCC---Ccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GL----FGIY-HDWCESFSTY---PRTYDLLHA 711 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Gl----ig~~-~~~ce~f~ty---prtyDl~Ha 711 (796)
..|||+|||+|+|+.+|..... .|+-+|.. ..|..+-++ || +-++ .|..+.++.. ..+||+|-+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4699999999999988876654 45555554 344433222 33 1122 2222211111 358999976
Q ss_pred ccc-cccccC------CcchHHHHHhhcccccCCcEEEEec-------cHHHHHHHHHHHhcCCceEE
Q 003776 712 DHL-FSKIKK------RCNLVAVVAEVDRILRPEGKLIVRD-------DVETINELESMVKGMQWEVR 765 (796)
Q Consensus 712 ~~~-~s~~~~------rC~~~~~l~E~DRiLRP~G~~i~rd-------~~~~~~~~~~~~~~l~W~~~ 765 (796)
+-- |..... .-.+..+|-++-|+|+|||++++.. .......+++.++....++.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 432 221100 1124577889999999999977741 22344455555556665554
No 489
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.96 E-value=0.00056 Score=69.29 Aligned_cols=88 Identities=22% Similarity=0.291 Sum_probs=53.4
Q ss_pred ccccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh----cccc---cccccccccCCCCcccccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER----GLFG---IYHDWCESFSTYPRTYDLLHA 711 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR----Glig---~~~~~ce~f~typrtyDl~Ha 711 (796)
.-.+|||+|||.|.+++.|... .|+.+ +.. ..+..+-++ |+-. +..|...+++. ...||+|.+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~v-----D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTI-----ERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEE-----ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEE-----eCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEE
Confidence 3457999999999999988653 33333 322 333333332 3211 22333334432 124999997
Q ss_pred ccccccccCCcchHHHHHhhcccccCCcEEEEec
Q 003776 712 DHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD 745 (796)
Q Consensus 712 ~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd 745 (796)
...+..+. -++-|+|+|||.+++.-
T Consensus 165 ~~~~~~~~---------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 165 TAGAPKIP---------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CSBBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred CCcHHHHH---------HHHHHhcCCCcEEEEEE
Confidence 76654332 26779999999999864
No 490
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.96 E-value=0.003 Score=66.24 Aligned_cols=101 Identities=11% Similarity=0.027 Sum_probs=59.5
Q ss_pred ccccccccCccc---cceeeeccCC-CeEEEEeecCCCC-CChhHHHhh----c-ccccccccccc-----c----CCCC
Q 003776 643 TVRNVMDMRSVY---GGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER----G-LFGIYHDWCES-----F----STYP 703 (796)
Q Consensus 643 ~iRnvmDm~~g~---g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR----G-lig~~~~~ce~-----f----~typ 703 (796)
.++.|||+|||. |.++..+... |= ..|+=+|.. ..|..+-+| + +-=+..|.... . .++|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 578999999999 9876554321 10 122223322 233332222 1 11122232211 0 1122
Q ss_pred -ccccccccccccccccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 704 -RTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 704 -rtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
.+||+|-+.++|-.+... ....+|-++-|+|||||+|+|.+.
T Consensus 155 ~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 378998877777766554 677899999999999999999754
No 491
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=95.96 E-value=0.0024 Score=65.96 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=62.1
Q ss_pred cccccccCccccceeeeccCC---CeEEEEeecCCCC-CChhHHHhh-----c-cc----ccccccccccCCCCcccccc
Q 003776 644 VRNVMDMRSVYGGFAAAMKDI---SVWVMNVISIDSP-DTLPIIYER-----G-LF----GIYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 644 iRnvmDm~~g~g~faA~l~~~---~vwvmnv~p~~~~-~~l~~i~eR-----G-li----g~~~~~ce~f~typrtyDl~ 709 (796)
-..|||+|||.|.++.+|... .. .|+-+|-. ..+..+-++ | +. -+..|..+. +.-+.+||+|
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~D~v 175 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSVDRA 175 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCEEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCceeEE
Confidence 346999999999999988753 22 23333433 344444333 3 21 122344332 2114689998
Q ss_pred ccccccccccCCcchHHHHHhhcccccCCcEEEEec-cHHHHHHHHHHHhc-CCc
Q 003776 710 HADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVRD-DVETINELESMVKG-MQW 762 (796)
Q Consensus 710 Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~rd-~~~~~~~~~~~~~~-l~W 762 (796)
-++. -....+|-++-|+|+|||++++.. ..+.+.++...++. ..|
T Consensus 176 ~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f 222 (280)
T 1i9g_A 176 VLDM--------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCW 222 (280)
T ss_dssp EEES--------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSB
T ss_pred EECC--------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence 7521 133467899999999999999864 33344444443332 444
No 492
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=95.94 E-value=0.0011 Score=71.57 Aligned_cols=95 Identities=14% Similarity=0.246 Sum_probs=62.2
Q ss_pred cccccccccccCccccceeeeccCC--C--eEEEEeecCCCCCChhHHHh-hcccccccccccccCCCCccccccccccc
Q 003776 640 NWSTVRNVMDMRSVYGGFAAAMKDI--S--VWVMNVISIDSPDTLPIIYE-RGLFGIYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 640 ~w~~iRnvmDm~~g~g~faA~l~~~--~--vwvmnv~p~~~~~~l~~i~e-RGlig~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
.|...+.|||+|||.|.++.+|... . +.++-+ | ..+..+-+ .++--+-+|..+++ | .||+|.+.++
T Consensus 190 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~---~-~~D~v~~~~v 260 (358)
T 1zg3_A 190 VFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKSI---P-SADAVLLKWV 260 (358)
T ss_dssp HHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTCC---C-CCSEEEEESC
T ss_pred hccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCCC---C-CceEEEEccc
Confidence 4566789999999999999998654 2 333332 2 11100000 23333445665544 4 3999999998
Q ss_pred cccccCCcchHHHHHhhcccccC---CcEEEEe
Q 003776 715 FSKIKKRCNLVAVVAEVDRILRP---EGKLIVR 744 (796)
Q Consensus 715 ~s~~~~rC~~~~~l~E~DRiLRP---~G~~i~r 744 (796)
|-.|... ....+|-++-|+|+| ||+++|-
T Consensus 261 lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 261 LHDWNDE-QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp GGGSCHH-HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred ccCCCHH-HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 8877532 123689999999999 9999985
No 493
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=95.90 E-value=0.00042 Score=69.45 Aligned_cols=88 Identities=19% Similarity=0.223 Sum_probs=51.8
Q ss_pred ccccccCccccceeeeccCC------C-eEEEEeecCCCC-CChhHHHhh----cc-------c-ccccccccccC---C
Q 003776 645 RNVMDMRSVYGGFAAAMKDI------S-VWVMNVISIDSP-DTLPIIYER----GL-------F-GIYHDWCESFS---T 701 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~------~-vwvmnv~p~~~~-~~l~~i~eR----Gl-------i-g~~~~~ce~f~---t 701 (796)
..|||+|||.|.+++.|... | .-|..| +.. ..+..+-++ |+ + -+..|..+.++ .
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL---ERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE---ESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE---eCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 47999999999999888653 1 122222 222 233333322 31 1 12223333220 1
Q ss_pred CCccccccccccccccccCCcchHHHHHhhcccccCCcEEEEe
Q 003776 702 YPRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILRPEGKLIVR 744 (796)
Q Consensus 702 yprtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLRP~G~~i~r 744 (796)
-+..||+|++...+.. ++-++-|+|+|||.+++.
T Consensus 159 ~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE---------LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp HHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEE
Confidence 1367999997766542 346778999999999986
No 494
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=95.84 E-value=0.0087 Score=63.76 Aligned_cols=124 Identities=12% Similarity=0.116 Sum_probs=70.3
Q ss_pred ccccccCc------cccc-eeeeccC--CCeEEEEeecCCCCCChhHHHhhcccc-cccccccccCCCCccccccccccc
Q 003776 645 RNVMDMRS------VYGG-FAAAMKD--ISVWVMNVISIDSPDTLPIIYERGLFG-IYHDWCESFSTYPRTYDLLHADHL 714 (796)
Q Consensus 645 RnvmDm~~------g~g~-faA~l~~--~~vwvmnv~p~~~~~~l~~i~eRGlig-~~~~~ce~f~typrtyDl~Ha~~~ 714 (796)
..|||+|| |.|+ .+|.+.. ..|.-+-+.|. + .++.= +.+|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v-----~~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V-----SDADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B-----CSSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C-----CCCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 45999999 4476 2333333 23444444443 2 13333 55676542 2 3578999997643
Q ss_pred ccc--------ccCCcchHHHHHhhcccccCCcEEEEeccH-HHHHHHHHHHhcCCc-eEEEee--ccCCceEEEEEe
Q 003776 715 FSK--------IKKRCNLVAVVAEVDRILRPEGKLIVRDDV-ETINELESMVKGMQW-EVRMTY--SKDKEGLLCVEK 780 (796)
Q Consensus 715 ~s~--------~~~rC~~~~~l~E~DRiLRP~G~~i~rd~~-~~~~~~~~~~~~l~W-~~~~~~--~~~~e~~l~~~K 780 (796)
... ....-.+..+|-++-|+|||||.|++.... .....+..+++...| .+.... ....|.+|+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 211 011122357889999999999999985311 123466667766634 444431 223577887765
No 495
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.83 E-value=0.0066 Score=63.73 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=76.0
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------cc----cc-cccccccccCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------GL----FG-IYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------Gl----ig-~~~~~ce~f~typrtyDl~ 709 (796)
.-++|||+|||.|+++..|..+ ++- .|+-++-. .-+.++-++ |+ +- +..|-.+-++..+.+||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 4678999999999999999877 442 22222222 222222211 11 11 1222222223335789999
Q ss_pred ccccccccccC--CcchHHHHHhhcccccCCcEEEEec-----cHHHHHHHHHHHhcCCceEEEee------ccCCceEE
Q 003776 710 HADHLFSKIKK--RCNLVAVVAEVDRILRPEGKLIVRD-----DVETINELESMVKGMQWEVRMTY------SKDKEGLL 776 (796)
Q Consensus 710 Ha~~~~s~~~~--rC~~~~~l~E~DRiLRP~G~~i~rd-----~~~~~~~~~~~~~~l~W~~~~~~------~~~~e~~l 776 (796)
-++... .+.. ......++-++-|+|+|||.+++.. ..+.+..+.+.++..=-.+.... ..+.-.++
T Consensus 153 i~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~ 231 (275)
T 1iy9_A 153 MVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFT 231 (275)
T ss_dssp EESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEE
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEE
Confidence 976433 2221 1112467888999999999999962 23344555554544433333321 12345688
Q ss_pred EEEecc
Q 003776 777 CVEKSM 782 (796)
Q Consensus 777 ~~~K~~ 782 (796)
++.|.+
T Consensus 232 ~ask~~ 237 (275)
T 1iy9_A 232 IGSKKY 237 (275)
T ss_dssp EEESSC
T ss_pred EeeCCC
Confidence 888874
No 496
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.76 E-value=0.0017 Score=68.18 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=56.3
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCC-C-CChhHHHhh---------cc-------cc-cccccccccCCC---
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDS-P-DTLPIIYER---------GL-------FG-IYHDWCESFSTY--- 702 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~-~-~~l~~i~eR---------Gl-------ig-~~~~~ce~f~ty--- 702 (796)
+.|||+|||.|.++.+|..... -.|+-+|- . ..+.++-++ |+ |- +..+|.......
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 5799999999999888766542 12333343 2 333333221 22 21 225576543221
Q ss_pred --CccccccccccccccccCCcchHHHHHhhccccc---C--CcEEEE
Q 003776 703 --PRTYDLLHADHLFSKIKKRCNLVAVVAEVDRILR---P--EGKLIV 743 (796)
Q Consensus 703 --prtyDl~Ha~~~~s~~~~rC~~~~~l~E~DRiLR---P--~G~~i~ 743 (796)
+..||+|-+..++-. .-.+..+|-++.|+|+ | ||.++|
T Consensus 159 ~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 478999986554432 2235678899999999 9 996554
No 497
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.74 E-value=0.004 Score=66.92 Aligned_cols=136 Identities=15% Similarity=0.162 Sum_probs=70.4
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHhh------cc----cc-cccccccccCCCCcccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYER------GL----FG-IYHDWCESFSTYPRTYDLL 709 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~eR------Gl----ig-~~~~~ce~f~typrtyDl~ 709 (796)
.-++|||+|||.|+++..|... ++. .|+-++-. .-+.++-++ |+ |- +..|..+.++.-+.+||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVE--KVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCC--EEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 3578999999999999999876 332 33333332 223332221 22 11 1223322222235789999
Q ss_pred ccccccccccC-Ccch-HHHHHhhcccccCCcEEEEec-----cHHHHHHHHHHHhcCCceEEEee----c--cCCceEE
Q 003776 710 HADHLFSKIKK-RCNL-VAVVAEVDRILRPEGKLIVRD-----DVETINELESMVKGMQWEVRMTY----S--KDKEGLL 776 (796)
Q Consensus 710 Ha~~~~s~~~~-rC~~-~~~l~E~DRiLRP~G~~i~rd-----~~~~~~~~~~~~~~l~W~~~~~~----~--~~~e~~l 776 (796)
-++. +..+.. .-.+ ..++-++-|+|||||.+++.. ....+..+.+..+.+--.+.... + .+.=.++
T Consensus 186 i~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~ 264 (314)
T 2b2c_A 186 ITDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYL 264 (314)
T ss_dssp EECC-C-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEE
T ss_pred EEcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEE
Confidence 9654 222211 1112 567889999999999999963 22333444444433323333321 1 1111588
Q ss_pred EEEec
Q 003776 777 CVEKS 781 (796)
Q Consensus 777 ~~~K~ 781 (796)
++.|.
T Consensus 265 ~ask~ 269 (314)
T 2b2c_A 265 ICAKN 269 (314)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88876
No 498
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.73 E-value=0.00077 Score=71.92 Aligned_cols=92 Identities=17% Similarity=0.139 Sum_probs=55.5
Q ss_pred ccccccCccccceeeeccCCCeEEEEeecCCCC-CChhHHHhh----cccc---cccccccccCCCCccccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKDISVWVMNVISIDSP-DTLPIIYER----GLFG---IYHDWCESFSTYPRTYDLLHADHLFS 716 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~~~vwvmnv~p~~~~-~~l~~i~eR----Glig---~~~~~ce~f~typrtyDl~Ha~~~~s 716 (796)
..|||+|||.|.++..|...-----.|+-++.. ..+..+-++ |+-. +..|..+.++ .+..||+|.+...+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVGVD 155 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSBBS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCCHH
Confidence 479999999999998886531000012222222 444444443 5421 2234433222 236899999888776
Q ss_pred cccCCcchHHHHHhhcccccCCcEEEEecc
Q 003776 717 KIKKRCNLVAVVAEVDRILRPEGKLIVRDD 746 (796)
Q Consensus 717 ~~~~rC~~~~~l~E~DRiLRP~G~~i~rd~ 746 (796)
... -++-|+|+|||.+++...
T Consensus 156 ~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 156 EVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCC---------HHHHHHEEEEEEEEEEBC
T ss_pred HHH---------HHHHHhcCCCcEEEEEEC
Confidence 433 366789999999999743
No 499
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.71 E-value=0.0039 Score=66.75 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=75.1
Q ss_pred ccccccccCccccceeeeccCC-CeEEEEeecCCCC-CChhHHHh------hc-c----cc-cccccccccCCCCccccc
Q 003776 643 TVRNVMDMRSVYGGFAAAMKDI-SVWVMNVISIDSP-DTLPIIYE------RG-L----FG-IYHDWCESFSTYPRTYDL 708 (796)
Q Consensus 643 ~iRnvmDm~~g~g~faA~l~~~-~vwvmnv~p~~~~-~~l~~i~e------RG-l----ig-~~~~~ce~f~typrtyDl 708 (796)
.-+.|||+|||.|+++..|..+ ++- .|+-++-. .-+.++-+ +| + +- +..|..+-++..+.+||+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVE--KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 3478999999999999999876 332 22222322 22222211 11 1 11 122332222223678999
Q ss_pred cccccccccc---cC--CcchHHHHHhhcccccCCcEEEEec------cHHHHHHHHHHHhcCCceEEEee----c-cCC
Q 003776 709 LHADHLFSKI---KK--RCNLVAVVAEVDRILRPEGKLIVRD------DVETINELESMVKGMQWEVRMTY----S-KDK 772 (796)
Q Consensus 709 ~Ha~~~~s~~---~~--rC~~~~~l~E~DRiLRP~G~~i~rd------~~~~~~~~~~~~~~l~W~~~~~~----~-~~~ 772 (796)
|-++... .+ .. .--...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+.... . .+.
T Consensus 155 Ii~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~ 233 (314)
T 1uir_A 155 VIIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLN 233 (314)
T ss_dssp EEEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEE
T ss_pred EEECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCe
Confidence 9987433 32 11 1113567889999999999999852 22345555555555433333221 1 122
Q ss_pred ceEEEEEecc
Q 003776 773 EGLLCVEKSM 782 (796)
Q Consensus 773 e~~l~~~K~~ 782 (796)
-.+++|.|.+
T Consensus 234 ~~~~~as~~~ 243 (314)
T 1uir_A 234 FGFLLASDAF 243 (314)
T ss_dssp EEEEEEESSS
T ss_pred EEEEEEECCC
Confidence 3578888863
No 500
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.60 E-value=0.0076 Score=65.04 Aligned_cols=135 Identities=13% Similarity=0.121 Sum_probs=70.5
Q ss_pred ccccccCccccceeeeccC-CCeEEEEeecCCCC-CChhHHHhh-cc-----cc-cccccccccCCC-Cccccccccccc
Q 003776 645 RNVMDMRSVYGGFAAAMKD-ISVWVMNVISIDSP-DTLPIIYER-GL-----FG-IYHDWCESFSTY-PRTYDLLHADHL 714 (796)
Q Consensus 645 RnvmDm~~g~g~faA~l~~-~~vwvmnv~p~~~~-~~l~~i~eR-Gl-----ig-~~~~~ce~f~ty-prtyDl~Ha~~~ 714 (796)
+.|||+|||.|+++..|.. .|-. .|+-++-. .-+.++-++ ++ +- +..|-.+-...+ +.+||+|-.+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~- 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV- 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-
Confidence 3899999999999999987 3321 12222222 222222111 01 11 122322222233 37899998753
Q ss_pred cccccCCcc--hHHHHHhhcccccCCcEEEEecc--H--HHHHH-HHHHHhcCCceEEEe-ec------cCCceEEEEEe
Q 003776 715 FSKIKKRCN--LVAVVAEVDRILRPEGKLIVRDD--V--ETINE-LESMVKGMQWEVRMT-YS------KDKEGLLCVEK 780 (796)
Q Consensus 715 ~s~~~~rC~--~~~~l~E~DRiLRP~G~~i~rd~--~--~~~~~-~~~~~~~l~W~~~~~-~~------~~~e~~l~~~K 780 (796)
|..+...-. -..++-++-|+|+|||.+++.-. . ..+.. ++.|...+. .+.+. .. ....-|++|.|
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~ 246 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSD 246 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEES
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEEC
Confidence 333221111 25678899999999999998521 1 22222 333333333 33332 11 12346789988
Q ss_pred ccc
Q 003776 781 SMW 783 (796)
Q Consensus 781 ~~w 783 (796)
...
T Consensus 247 ~pl 249 (317)
T 3gjy_A 247 TEF 249 (317)
T ss_dssp SCC
T ss_pred CCC
Confidence 765
Done!