Query 003778
Match_columns 796
No_of_seqs 370 out of 927
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 11:52:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003778.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003778hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1162 Predicted small molecu 100.0 1E-145 2E-150 1237.6 49.8 609 2-795 1-612 (617)
2 PF03124 EXS: EXS family; Int 100.0 2.3E-80 4.9E-85 682.5 28.3 332 441-775 2-345 (345)
3 COG5409 EXS domain-containing 100.0 4.9E-64 1.1E-68 526.7 18.5 365 404-787 5-379 (384)
4 PF03105 SPX: SPX domain; Int 100.0 1.9E-32 4E-37 289.2 20.5 272 2-351 1-274 (275)
5 KOG1161 Protein involved in va 100.0 2.4E-28 5.2E-33 257.9 17.9 177 2-382 1-177 (310)
6 COG5036 SPX domain-containing 99.9 6.9E-22 1.5E-26 212.4 15.8 168 2-381 1-168 (509)
7 COG5408 SPX domain-containing 99.8 9.4E-18 2E-22 177.5 15.6 55 297-351 237-291 (296)
8 COG3872 Predicted metal-depend 58.7 53 0.0011 35.4 8.8 91 445-561 150-245 (318)
9 KOG4466 Component of histone d 43.7 39 0.00085 36.6 5.2 47 111-157 12-58 (291)
10 PF08733 PalH: PalH/RIM21; In 40.5 5.9E+02 0.013 28.8 15.0 34 327-362 135-169 (348)
11 PF03904 DUF334: Domain of unk 38.8 5.1E+02 0.011 27.6 14.5 44 292-342 69-112 (230)
12 PF03189 Otopetrin: Otopetrin; 33.4 5.4E+02 0.012 30.1 12.9 10 403-412 239-248 (441)
13 PF11120 DUF2636: Protein of u 29.3 74 0.0016 27.0 3.6 38 525-562 7-44 (62)
14 PF06570 DUF1129: Protein of u 28.9 6.6E+02 0.014 25.9 15.4 12 381-392 54-66 (206)
15 PF10777 YlaC: Inner membrane 27.4 3.3E+02 0.0073 27.2 8.2 12 405-416 37-48 (155)
16 PF14193 DUF4315: Domain of un 26.1 1.5E+02 0.0033 26.6 5.2 36 118-157 3-38 (83)
17 PF07889 DUF1664: Protein of u 25.1 3.3E+02 0.0071 26.4 7.7 52 112-163 39-90 (126)
18 PF04133 Vps55: Vacuolar prote 23.9 1.5E+02 0.0032 28.5 5.1 75 614-694 32-118 (120)
19 PHA03048 IMV membrane protein; 23.5 3.1E+02 0.0068 25.0 6.6 22 402-424 10-31 (93)
20 PF08826 DMPK_coil: DMPK coile 22.3 4.9E+02 0.011 22.1 7.2 44 113-156 8-54 (61)
21 PF15389 DUF4612: Domain of un 22.2 64 0.0014 30.7 2.2 18 110-127 87-104 (115)
22 PF05478 Prominin: Prominin; 20.7 4E+02 0.0087 33.6 9.4 62 401-462 413-491 (806)
23 KOG1281 Na+/dicarboxylate, Na+ 20.6 89 0.0019 37.5 3.5 38 303-343 3-40 (586)
No 1
>KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-145 Score=1237.59 Aligned_cols=609 Identities=44% Similarity=0.745 Sum_probs=544.9
Q ss_pred cchhhhhhhcCchhhHHhhcChhhHHHHHHHhhhhccccCCCCCCCcccccccccccccccccccccccCCCCCCCCCCc
Q 003778 2 VKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKFSSFGQHQHREHH 81 (796)
Q Consensus 2 mkFgk~l~~q~~peW~~~Yi~Y~~LKk~lk~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (796)
|||||+|++||+|||+++||||+.|||+||+|+..+. +
T Consensus 1 MKFgk~~~~q~~pEW~~ay~dY~~lK~~l~~i~~~~~-----------------------------------~------- 38 (617)
T KOG1162|consen 1 MKFGKELESQLVPEWRQAYIDYKYLKKLLKEIIENKP-----------------------------------S------- 38 (617)
T ss_pred CcchHHHHHhcCHHHHHHhhhHHHHHHHHHHHHhcCC-----------------------------------C-------
Confidence 9999999999999999999999999999999997522 0
Q ss_pred cceeeeccccccCCCCCcchhhhhccc-CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003778 82 GAIQVHKKLASSASKGDMYETELLEQF-ADTDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTAL 160 (796)
Q Consensus 82 ~~i~v~~~~~~~g~~~~~y~t~~~~~~-~~~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~ 160 (796)
+ ++|++++.. .+++.|.+||+.||+||+|||+||++|++|+.+|.+.|++||+++++.|.+
T Consensus 39 ---------------~--~~t~~~~~~~~~~~~~~~Ff~~ld~el~Kvn~Fy~~k~~e~~~~~~~L~~ql~~~~~~r~~- 100 (617)
T KOG1162|consen 39 ---------------S--EETTFLMVSEEGGEFEEVFFRRLDEELNKVNKFYKEKVKEAREEAEELNKQLDALIALRVK- 100 (617)
T ss_pred ---------------c--CccHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 0 135555554 677999999999999999999999999999999999999999999999853
Q ss_pred hhhhcCCCCCCCCCCccccccccccccccchhhhhhhhcCCCCCCCCCCCCCCCCCCCccccccccccccccccccccCC
Q 003778 161 KKKRGKGASSQDSKEDESISCTISCEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLSG 240 (796)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (796)
.+ ++.+. . . +
T Consensus 101 -----~~----~~~~~-------------------------------------~-----------~---~---------- 110 (617)
T KOG1162|consen 101 -----SR----SSVDI-------------------------------------S-----------D---R---------- 110 (617)
T ss_pred -----cc----ccccc-------------------------------------c-----------c---c----------
Confidence 00 00000 0 0 0
Q ss_pred CcccccCccccccCCCCCCccccchhhhhhhhhhhccCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHhHHhH
Q 003778 241 GVYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKIPEGSNRLHINKTKLHHAEKMIRGALIELYKGLGYLKTY 320 (796)
Q Consensus 241 ~~~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lk~a~~E~Y~~L~lLksY 320 (796)
+ ++ ....++|+ ++++|++||.||+|||++|.+||+|
T Consensus 111 -~---------------------~~---------------------~~~~f~~~-~~~~e~~lk~af~Efy~~L~llk~y 146 (617)
T KOG1162|consen 111 -A---------------------AR---------------------LRGKFTKV-LRKAEEKLKLAFSEFYLKLRLLKNY 146 (617)
T ss_pred -c---------------------ch---------------------hhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00114555 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCChHHHHHhccccCCCChhHHHHHHHHHHHHHHHHhccccHHHHHHHhccccccCCcch
Q 003778 321 RNLNMLAFIKILKKFDKVTGKQVLPIYLKVVESSYFNSSDKVMNLADEVEELFIKHFADENRRKAMKYLKIHQRKESHGV 400 (796)
Q Consensus 321 ~~LN~taF~KIlKKyDK~~~~~~~~~ym~~v~~s~F~~~d~l~~li~~vE~ly~~~F~~gnrkkA~~~LR~~~~~~~~~~ 400 (796)
++||.|||+||+|||||+++++. ..|+++|+.++|.++|++++|+.+||++|+++|++|||++||+.||++ .++.|..
T Consensus 147 ~~lN~~~f~KI~KKyDK~~~~~~-~~~~~~v~~s~f~~~~~i~~l~~~Ve~~f~~~fan~nr~~~m~~lr~~-~~e~h~~ 224 (617)
T KOG1162|consen 147 QFLNVTAFRKILKKYDKITSRDA-KRYVKMVDKSYFTSSDEITRLMLEVEETFTKHFANGNRRKAMKVLRPK-LKEKHRP 224 (617)
T ss_pred HHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhCCChhHhhhhcCCc-ccccCCC
Confidence 99999999999999999999999 899999999999999999999999999999999999999999999999 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCeeEEeeeCCC
Q 003778 401 TFFIGLFTGCFIALLAGYVIMAHITGMYRPRPDTVYMETVYPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELAPT 480 (796)
Q Consensus 401 ~F~~Glf~G~~~~L~~~~~i~~~~~~~~~~~~~~~y~~~~~p~~~~f~L~~L~~~l~g~n~~iW~~~~INY~fIFe~~~~ 480 (796)
+|++|+++||++.+.+++.+++++.+++.+. +..|+++++|+++ |+++++|++|||+|||+|+++||||+||||++++
T Consensus 225 ~~~~~f~~g~~~~l~val~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~v~l~~fl~~~niy~W~~~rVNy~fIf~~~~~ 302 (617)
T KOG1162|consen 225 TFSTGFFVGCGIGLSVALVALIYLRNILQSE-QRFYMETMFPLYG-FGLVVLHKFLYNVNIYEWSRTRVNYKFIFEFDQR 302 (617)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHH-HHHHHHHHHHhcCchHHHHHhcCCceeeecCCcc
Confidence 9999999999999999998889998888775 8899999999998 9999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhHHHHHHHHHHHHhcccccchhhhHHHHHHHHHhhcCC
Q 003778 481 KELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYSYSQVQAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNIILSP 560 (796)
Q Consensus 481 ~~l~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~P~il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril~ap 560 (796)
+++++++++++++++..+.+.+++.++.....+.. ++++|++++++++++|+||++++|+++|+|+++++.||+++|
T Consensus 303 ~~l~~~~~l~i~~~~~~~~~l~~l~~l~~~~~~~~---~~~~Pl~ll~~~~~~L~~Pf~~fY~sSRf~ll~~l~rvi~sp 379 (617)
T KOG1162|consen 303 TELGYRDILLIHNTNGILEFLPVLKNLDMSMSGQT---TELSPLILLLLFFFLLVCPFNTFYRSSRFWLLKRLFRVLSSP 379 (617)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhccccCCCC---cccchHHHHHHHHheeeccchhhhHhhHHHHHHHHHHHHhcc
Confidence 99999999999998887777777777665544442 678999999999999999999999999999999999999999
Q ss_pred cceeecchhhhhhhhcchHHhhhhhhhhhhheecCCccccCCCcccccccchhhhHHHHHhHHHHHHHHhHHHhhccCCc
Q 003778 561 LYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGSFKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQT 640 (796)
Q Consensus 561 f~~V~F~DFflaDqltSl~~~l~Dl~~~~C~y~~g~~~~~~~~~C~~~~~~~~l~~i~~~lP~~~R~~QClRRy~dt~~~ 640 (796)
+++|.|+|||+|||+||++++++|+++++|+|.+|.|.... +|..+..+..+.++++++|+|||++||+|||.|++.+
T Consensus 380 l~~V~~~DFfl~Dql~S~v~a~~~l~~~~C~y~~~~~~~~~--~~~~~~~~~~~~~iva~lP~~~RfLQClRR~~d~~~~ 457 (617)
T KOG1162|consen 380 LYKVLFVDFFLADQLTSLVLALRDLEFFICYYGTGDFQARR--TCYCKDDYIEFQSIVAVLPYWFRFLQCLRRYRDEKAF 457 (617)
T ss_pred ceeeccccccHHHHHHHHHHHHHhHHHhheeeccccccccc--ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999999999999999999998765433 6666666778899999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhccCCc-chhhHHHHHhhhhhhhhhhhhhhhhccCcccCCCCcCccccccccccceee
Q 003778 641 SHLINLGKYVSAMLAAGAKVVYEKERSV-GWLCLVVVVSSGATVYQLYWDFVKDWGLLQVNSKNPWLRNELMLRRKCIYY 719 (796)
Q Consensus 641 ~hL~Na~KY~ssi~~~~~~~~y~~~~~~-~w~~~~ii~s~insiYs~~WDv~mDWgLl~~~sk~~~LR~~L~~~~k~~YY 719 (796)
+||+||+||+++++++++...|+..++. .|+++|++++++||+|+++||++|||||++++++ ||||++++||+||+||
T Consensus 458 ~hL~NAlKY~~~i~~v~~~~~y~~~~~~~~~~~l~~~~s~vaS~y~~~WDvv~DWgLl~~~~~-~~lRd~l~~p~k~vYy 536 (617)
T KOG1162|consen 458 PHLLNALKYSTTILAVMLTTLYRILPGSSLWFALWILSSKVASLYTTYWDVVMDWGLLNRKSK-PWLRDNLLYPQKWVYY 536 (617)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHheecccccccCc-hhhHHHhcccchheeh
Confidence 9999999999999999999999988775 9999999999999999999999999999999999 9999999999999999
Q ss_pred hhhhhhhHHHHHHHHHhh-cccccccchhhHHHHHHHHHHHhhhceeeeeehhhhhhccCCceeccccCCCCcCCCC
Q 003778 720 FSMGLNLVLRLAWFQTVL-HSNFEHVDYRVTGLFLAALEVIRRGIWNFYRLENEHLNNAGKFRAVKTVPLPFEIDEE 795 (796)
Q Consensus 720 ~Aiv~n~iLRf~W~~~~~-~~~~~~~~~~~~~f~~a~lEI~RR~iWnffRvEnEHl~N~~~fRa~rdvpLP~~~~~~ 795 (796)
+||+.|++|||+|++.++ ..+..+. +..+++++|++||+|||+||||||||||+||||+|||+++||+|++.++|
T Consensus 537 ~aiv~N~vLR~aW~~~~i~~~~~~~~-~~~~~~i~a~LEIiRRfiWnfFRLEnEhlnN~g~fRa~~~v~l~~~~~~~ 612 (617)
T KOG1162|consen 537 SAIVLNFVLRFAWFFKTILVFHEEFL-SDSMVFIMALLEIIRRFIWNFFRLENEHLNNVGKFRAFRDVPLPFSYMDE 612 (617)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhccccccCCchhhhccc
Confidence 999999999999966643 3332222 78899999999999999999999999999999999999999999955443
No 2
>PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1. The N-terminal of these proteins often have an SPX domain (IPR004331 from INTERPRO) []. While the N-terminal is thought to be involved in signal transduction, the role of the C-terminal is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) S. cerevisiae proteins. ERD1 proteins are involved in the localization of endogenous endoplasmic reticulum (ER) proteins. Erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localization label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles [].; GO: 0016021 integral to membrane
Probab=100.00 E-value=2.3e-80 Score=682.51 Aligned_cols=332 Identities=42% Similarity=0.729 Sum_probs=293.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCeeEEeeeCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----c
Q 003778 441 YPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELAPTKELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYS----Y 516 (796)
Q Consensus 441 ~p~~~~f~L~~L~~~l~g~n~~iW~~~~INY~fIFe~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~ 516 (796)
+|+||+.+++++++|+||+|+++|+++||||++|||+||++++++++++.+++.++.+...++..++.....+.. .
T Consensus 2 ~~~~R~~~L~~l~~~l~~~nl~v~~~~~Iny~~If~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 81 (345)
T PF03124_consen 2 PPPFRGLLLLILGLWLWGINLYVWSRYRINYVFIFELDPRNSLSYRQLFELASFLTIIWLLCFLIYLASVSPSIISFANW 81 (345)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHhcCCcccCCcHHHHHhhhHHHHHHHHHHHHHHHHHHcCCcccccch
Confidence 578999999999999999999999999999999999999999999999998876655555454444433322211 1
Q ss_pred chhhhhhHHHHHHHHHHHHhcccccchhhhHHHHHHHHHhhcCCcceeecchhhhhhhhcchHHhhhhhhhhhhheecCC
Q 003778 517 SQVQAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNIILSPLYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGS 596 (796)
Q Consensus 517 ~~~~~~P~il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril~apf~~V~F~DFflaDqltSl~~~l~Dl~~~~C~y~~g~ 596 (796)
...+++|+++++++++++++|++++++++|+|++++++|++.+|+.+|+|+|||+||||||++++++|+++++|+|..+.
T Consensus 82 ~~~~~~Pll~~~~~~~~l~~P~~~~~~~~R~~~~~~l~ril~~~~~~v~f~d~~laD~LtS~~~~l~D~~~~~c~~~~~~ 161 (345)
T PF03124_consen 82 YFVEYIPLLLLLILLLLLFFPFNIFYRSSRRWFLRTLKRILLAPFYPVRFRDFFLADQLTSLSKVLGDLEFTICYYFSGS 161 (345)
T ss_pred hhHHHhhHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 12357899999999999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred ccccCCCcccccccchhhhHHHHHhHHHHHHHHhHHHhhccCCc-hhHhHHHHHHHHHHHHHHHHHhhccCCcc----hh
Q 003778 597 FKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQT-SHLINLGKYVSAMLAAGAKVVYEKERSVG----WL 671 (796)
Q Consensus 597 ~~~~~~~~C~~~~~~~~l~~i~~~lP~~~R~~QClRRy~dt~~~-~hL~Na~KY~ssi~~~~~~~~y~~~~~~~----w~ 671 (796)
+. ..+++|++.+.+ ..++++++|++||++||+|||+||++. +||+||+||+++++++.+...++...+.. +.
T Consensus 162 ~~-~~~~~c~~~~~~--~~~~~~~lP~~iR~~QClrry~~~~~~~~hL~Na~KY~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (345)
T PF03124_consen 162 FT-SPSNQCGSSSWY--IDPIVASLPYWIRFLQCLRRYRDTGDRFPHLFNALKYSSSIPVIILSALYRFYPSSDSSIWLF 238 (345)
T ss_pred cc-CCCCcCccccHh--HHhHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHH
Confidence 54 567899987664 348999999999999999999999988 99999999999999987766665554433 67
Q ss_pred hHHHHHhhhhhhhhhhhhhhhhccCcccC--CCCcCccccccccccceeehhhhhhhHHHHHHHHHhhccccc-ccchhh
Q 003778 672 CLVVVVSSGATVYQLYWDFVKDWGLLQVN--SKNPWLRNELMLRRKCIYYFSMGLNLVLRLAWFQTVLHSNFE-HVDYRV 748 (796)
Q Consensus 672 ~~~ii~s~insiYs~~WDv~mDWgLl~~~--sk~~~LR~~L~~~~k~~YY~Aiv~n~iLRf~W~~~~~~~~~~-~~~~~~ 748 (796)
.+|++++++||+||++|||+|||||++++ +++++||++++|++|++||+||+.|+++||+|++++++.+.. ..+++.
T Consensus 239 ~~w~~~~~i~s~Ys~~WDv~~DWgL~~~~~~~~~~~LR~~l~~~~~~~Yy~ai~~n~ilRf~W~~~~~~~~~~~~~~~~~ 318 (345)
T PF03124_consen 239 ILWIIFALINSLYSFYWDVKMDWGLFQPKKKSKNWLLRRRLLYPRKWFYYFAIILNFILRFAWILTLSPPHFSHIDNSEI 318 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCccccCCCCCccccccCCcchhhhHHHHHHHHHHHHHHHHHHhhcchhhhHHH
Confidence 88999999999999999999999999988 789999999999999999999999999999999998765543 346789
Q ss_pred HHHHHHHHHHHhhhceeeeeehhhhhh
Q 003778 749 TGLFLAALEVIRRGIWNFYRLENEHLN 775 (796)
Q Consensus 749 ~~f~~a~lEI~RR~iWnffRvEnEHl~ 775 (796)
+.++++++||+||++||||||||||+|
T Consensus 319 ~~~~~~~lEi~RR~iWnffRlE~Ehin 345 (345)
T PF03124_consen 319 FIFILAILEIFRRFIWNFFRLENEHIN 345 (345)
T ss_pred HHHHHHHHHHHHHHhhheeeeeHhhcC
Confidence 999999999999999999999999997
No 3
>COG5409 EXS domain-containing protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-64 Score=526.72 Aligned_cols=365 Identities=24% Similarity=0.391 Sum_probs=288.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCcch-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCeeEEeeeCCCCC
Q 003778 404 IGLFTGCFIALLAGYVIMAHITGMYRPRPDTVY-METVYPVLSMFSLLFLHLFLYGCNIFMWKKARINYSFIFELAPTKE 482 (796)
Q Consensus 404 ~Glf~G~~~~L~~~~~i~~~~~~~~~~~~~~~y-~~~~~p~~~~f~L~~L~~~l~g~n~~iW~~~~INY~fIFe~~~~~~ 482 (796)
.|+-.|.+++|.+. +.+++...+...+ ...+.++|.++.+..+...++++++|+|.|.+|||++||+++..+.
T Consensus 5 v~~~~g~~l~l~~~------i~~l~~~~~~~~~~~~ill~lw~~~~l~~~~~~lf~v~~~i~~r~~inyr~i~~~e~~~~ 78 (384)
T COG5409 5 VGLEKGVSLSLGLY------IQNLLNVGEPQSFIVLILLALWGGWILVFFLAFLFDVSCYILTRTPINYRFIFLFEQLSS 78 (384)
T ss_pred eeeeccccccHHHH------HHHheeCCchHHHHHHHHHHHHhHHHHHHHHHHHhcCceeeEEeccccchhhhhHhHhhh
Confidence 45556665554331 1122222333333 3446788999999999999999999999999999999999976432
Q ss_pred ----CChhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcchhhhhhHHHHHHHHHHHHhcccccchhhhHHHHHHHHHhh
Q 003778 483 ----LKHRDVFLICTTSMTAVVGVMFVHLSLITK-GYSYSQVQAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNII 557 (796)
Q Consensus 483 ----l~~r~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~P~il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril 557 (796)
.+.+.-..+. ...+....++.++..... .+.......+|+++++....++++|+++.|+.+|+|++.++.|++
T Consensus 79 ~a~~~~~dfh~~~i--~~~~~~~slfiFl~~v~g~~~~l~~~~~~P~l~v~~vf~~ll~Pf~ii~y~sRr~Li~sliRv~ 156 (384)
T COG5409 79 TARNFNLDFHRIII--PFHFFTTSLFIFLNAVEGLKFILLFVYFLPLLQVGTVFWFLLKPFQIIYYWSRRYLIESLIRVF 156 (384)
T ss_pred hhcccchhhHHHhh--hHHHHHHHHHHHHHHhhccccceehhhhccHHHHHHHHHHhhcccceeeecchhhHHHHHHHHH
Confidence 4444322111 111111122222333221 122334567899999999999999999999999999999999999
Q ss_pred cCCcceeecchhhhhhhhcchHHhhhhhhhhhhheecCCccccCCCcccccccchhhhHHHHHhHHHHHHHHhHHHhhcc
Q 003778 558 LSPLYKVLMLDFFMADQLCSQVPLLRNLEFVACYYITGSFKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDE 637 (796)
Q Consensus 558 ~apf~~V~F~DFflaDqltSl~~~l~Dl~~~~C~y~~g~~~~~~~~~C~~~~~~~~l~~i~~~lP~~~R~~QClRRy~dt 637 (796)
.+|+..|+|.||++||++||+|++++|+..++|.|..- + +.| -|+++.. .+.++++++|.++|++||+|||.|+
T Consensus 157 l~~~~~v~f~dF~f~di~~SlTya~gdi~~FfCv~~~~-~--~~p-Lc~sshs--~~~g~~~~lP~ivR~lQCLRry~ds 230 (384)
T COG5409 157 LFGYSLVRFTDFFFGDILISLTYALGDIYIFFCVYSLL-F--REP-LCKSSHS--DLSGLAALLPVIVRFLQCLRRYRDS 230 (384)
T ss_pred HhccceeeeeeeehhhHHHHHHHhhhhhhhHHHHHhhh-c--ccc-ccccCCc--chHhHHHhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999642 2 344 6887754 4677899999999999999999999
Q ss_pred C-CchhHhHHHHHHHHHHHHHHHHHhhccC-CcchhhHHHHHhhhhhhhhhhhhhhhhccCcccCCCC-cCccccccccc
Q 003778 638 G-QTSHLINLGKYVSAMLAAGAKVVYEKER-SVGWLCLVVVVSSGATVYQLYWDFVKDWGLLQVNSKN-PWLRNELMLRR 714 (796)
Q Consensus 638 ~-~~~hL~Na~KY~ssi~~~~~~~~y~~~~-~~~w~~~~ii~s~insiYs~~WDv~mDWgLl~~~sk~-~~LR~~L~~~~ 714 (796)
+ .+|||.||+||++++++..+...|+..+ +...++.+++++.+||+|++.|||+||||+..+.++. +-+|+.++++
T Consensus 231 ~~~fphLlNALKYs~~i~v~~~~~~~r~~~~~~~l~~l~~~~a~lnS~yT~~WDV~mDW~l~~~~~~~~~~kr~~~~l~- 309 (384)
T COG5409 231 LHEFPHLLNALKYSLNIPVLFCLWLYRVYEGEERLFHLQIWFALLNSIYTSFWDVFMDWSLDSLTSLRSWSKRAVTLLK- 309 (384)
T ss_pred hhhhHHHHHHHHHHHhhHHHHHHHHHHhccCcceeehHHHHHHHHHHHHHHhHHhheeeeecccccchhccccchhHHH-
Confidence 6 6899999999999999988888888765 4455667888999999999999999999998887654 5588888765
Q ss_pred cceeehhhhhhhHHHHHHHHHhhcccccccchh-hHHHHHHHHHHHhhhceeeeeehhhhhhccCCceeccccC
Q 003778 715 KCIYYFSMGLNLVLRLAWFQTVLHSNFEHVDYR-VTGLFLAALEVIRRGIWNFYRLENEHLNNAGKFRAVKTVP 787 (796)
Q Consensus 715 k~~YY~Aiv~n~iLRf~W~~~~~~~~~~~~~~~-~~~f~~a~lEI~RR~iWnffRvEnEHl~N~~~fRa~rdvp 787 (796)
||+||++|+++||+|+++..++++ .+++. ...|+++++||+|||+|++||||+||.+|+..+|+.++.|
T Consensus 310 ---y~~a~~inFllR~~Wi~~~~~~~~-~~~~~~~~~F~m~~lEi~RR~vW~~FrveaE~~~n~~~~~~~~~~~ 379 (384)
T COG5409 310 ---YHIAMIINFLLRFSWIVYYLPPNH-IQHSADIFIFIMQLLEILRRFVWVFFRVEAEHSINFASFRAAGELK 379 (384)
T ss_pred ---HHHHHHHHHHHHHHHHHhhcchhh-hhhhhhhHHHHHHHHHHHHhheeeEEEeehHHHhhHHHhhhcccCC
Confidence 999999999999999999876654 44443 3449999999999999999999999999999999999988
No 4
>PF03105 SPX: SPX domain; InterPro: IPR004331 The SPX domain is named after SYG1/Pho81/XPR1 proteins. This 180 residue length domain is found at the amino terminus of a variety of proteins. In the yeast protein SYG1, the N terminus directly binds to the G- protein beta subunit and inhibits transduction of the mating pheromone signal [] suggesting that all the members of this family are involved in G-protein associated signal transduction. The C-terminal of these proteins often have an EXS domain (IPR004342 from INTERPRO) []. The N-termini of several proteins involved in the regulation of phosphate transport, including the putative phosphate level sensors PHO81 from Saccharomyces cerevisiae and NUC-2 from Neurospora crassa, are also members of this family [, ]. NUC-2 contains several ankyrin repeats (IPR002110 from INTERPRO). Several members of this family are the XPR1 proteins: the xenotropic and polytropic retrovirus receptor confers susceptibility to infection with Murine leukemia virus (MLV) []. The similarity between SYG1, phosphate regulators and XPR1 sequences has been previously noted, as has the additional similarity to several predicted proteins, of unknown function, from Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Schizosaccharomyces pombe, and Saccharomyces cerevisiae [, ]. In addition, given the similarities between XPR1 and SYG1 and phosphate regulatory proteins, it has been proposed that XPR1 might be involved in G-protein associated signal transduction [, , ] and may itself function as a phosphate sensor [].
Probab=100.00 E-value=1.9e-32 Score=289.19 Aligned_cols=272 Identities=33% Similarity=0.393 Sum_probs=147.2
Q ss_pred cchhhhhhhcCchhhHHhhcChhhHHHHHHHhhhhccccCCCCCCCcccccccccccccccccccccccCCCCCCCCCCc
Q 003778 2 VKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKFSSFGQHQHREHH 81 (796)
Q Consensus 2 mkFgk~l~~q~~peW~~~Yi~Y~~LKk~lk~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (796)
|||||+|+.++||||+++||||+.|||+||+++................... .+ . . .++.+..... ...
T Consensus 1 MKFgk~L~~~~vpEW~~~YidYk~LKk~ik~~~~~~~~~~~~~~~~~~~~~~-~~-----~-~-~~~~~~~~~~---~~~ 69 (275)
T PF03105_consen 1 MKFGKQLQENAVPEWRDKYIDYKQLKKLIKRIQNEKESLGLSAETLSSISIS-SS-----S-S-SSSRSSSNSF---EST 69 (275)
T ss_pred CCchHHHHHhcCHHHHHHhCCHHHHHHHHHHHHhhhhcccccccccchhhhh-hh-----h-h-cccccccccc---ccc
Confidence 9999999999999999999999999999999987643221111000000000 00 0 0 0000000000 000
Q ss_pred cceeeeccccccCCCCCcchhhhhcccCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003778 82 GAIQVHKKLASSASKGDMYETELLEQFADTDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALK 161 (796)
Q Consensus 82 ~~i~v~~~~~~~g~~~~~y~t~~~~~~~~~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~~ 161 (796)
.+-... . ... .+......+..+.+..||..||.||+||+.||.+|++|+.+++..|++|++.+.+.+....
T Consensus 70 ~~~~~~-~--~~~------~~~~~~~~~~~~~~~~F~~~L~~El~KVn~Fy~~k~~el~~~~~~L~~ql~~l~~~~~~~~ 140 (275)
T PF03105_consen 70 SPSSSN-T--SPS------SSNSEQNEDNEESEEEFFELLDEELEKVNDFYKEKEKELRERLEELQKQLEELREQRSKSS 140 (275)
T ss_pred cccccc-c--ccc------ccccchhhhhhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 000000 0 000 0000001134458999999999999999999999999999999999999999999886443
Q ss_pred hhhcCCCCCCCCCCccccccccc--cccccchhhhhhhhcCCCCCCCCCCCCCCCCCCCccccccccccccccccccccC
Q 003778 162 KKRGKGASSQDSKEDESISCTIS--CEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLS 239 (796)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (796)
.........+...+........+ ..++.... ......+ ..+ . .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~---------~--------~~~~~ 189 (275)
T PF03105_consen 141 DKYNWNQSSQLSSSSNIFSSSSSASAGSSNSSS-----------ASRRSQR---FSS---------E--------SSKQS 189 (275)
T ss_pred cccccccchhhccccccccCccccccCCccccc-----------ccccccc---chh---------h--------hhhcc
Confidence 33222110000000000000000 00000000 0000000 000 0 00000
Q ss_pred CCcccccCccccccCCCCCCccccchhhhhhhhhhhccCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHhHHh
Q 003778 240 GGVYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKIPEGSNRLHINKTKLHHAEKMIRGALIELYKGLGYLKT 319 (796)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lk~a~~E~Y~~L~lLks 319 (796)
..+ ..+ .+....... ...... ... .....+.+++++|+.||.|+|+.|.+|++
T Consensus 190 ~~~----------~~~--~~~~~~~~~-------~~~~~~-------~~~-~~~~~~~~~~~~l~~~~~e~y~~l~~Lk~ 242 (275)
T PF03105_consen 190 SNS----------ESD--AESDNNRGD-------RSSDKP-------FLS-SSQKSLKKARKQLKKAFIELYRELELLKS 242 (275)
T ss_pred CCC----------Ccc--ccccccccc-------cccccc-------ccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 000000000 000000 111 34456788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCChHHHHHhc
Q 003778 320 YRNLNMLAFIKILKKFDKVTGKQVLPIYLKVV 351 (796)
Q Consensus 320 Y~~LN~taF~KIlKKyDK~~~~~~~~~ym~~v 351 (796)
|+.||+|||+||||||||+++++.+..||+.|
T Consensus 243 f~~LN~taf~KIlKK~DK~~~~~~~~~y~~~v 274 (275)
T PF03105_consen 243 FVELNRTAFRKILKKYDKVTGTSLSDDYMEEV 274 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchHhhhhcc
Confidence 99999999999999999999999999999865
No 5
>KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.4e-28 Score=257.92 Aligned_cols=177 Identities=29% Similarity=0.477 Sum_probs=147.8
Q ss_pred cchhhhhhhcCchhhHHhhcChhhHHHHHHHhhhhccccCCCCCCCcccccccccccccccccccccccCCCCCCCCCCc
Q 003778 2 VKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKFSSFGQHQHREHH 81 (796)
Q Consensus 2 mkFgk~l~~q~~peW~~~Yi~Y~~LKk~lk~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (796)
|||||+|++..+|||+++||||+.|||+||++... ... +
T Consensus 1 MkFGk~L~~~~l~ew~~~yinYk~LKK~lK~~~~~---------~~~-------------------------~------- 39 (310)
T KOG1161|consen 1 MKFGKYLKEELLPEWKDKYINYKELKKLLKQYSIQ---------TAD-------------------------S------- 39 (310)
T ss_pred CchhHHHHHhhhhhHhhhhcCHHHHHHHHHHhccc---------ccc-------------------------C-------
Confidence 99999999999999999999999999999998532 000 0
Q ss_pred cceeeeccccccCCCCCcchhhhhcccCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003778 82 GAIQVHKKLASSASKGDMYETELLEQFADTDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALK 161 (796)
Q Consensus 82 ~~i~v~~~~~~~g~~~~~y~t~~~~~~~~~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~~ 161 (796)
+ ....+|.+|++.||.|||||+.||.+||+|+..|+..|++|.++ ..
T Consensus 40 ------------~--------------~~~~~e~dFv~~Ld~ELEKv~~F~lek~~el~~Rl~~L~e~~~~--~~----- 86 (310)
T KOG1161|consen 40 ------------S--------------PDSRDESDFVRLLDAELEKVNGFQLEKESELIIRLKELEEKIDA--LS----- 86 (310)
T ss_pred ------------C--------------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cc-----
Confidence 0 01126999999999999999999999999999999999988765 00
Q ss_pred hhhcCCCCCCCCCCccccccccccccccchhhhhhhhcCCCCCCCCCCCCCCCCCCCccccccccccccccccccccCCC
Q 003778 162 KKRGKGASSQDSKEDESISCTISCEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLSGG 241 (796)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (796)
. +
T Consensus 87 ------------~----------------------------------------~-------------------------- 88 (310)
T KOG1161|consen 87 ------------L----------------------------------------E-------------------------- 88 (310)
T ss_pred ------------c----------------------------------------C--------------------------
Confidence 0 0
Q ss_pred cccccCccccccCCCCCCccccchhhhhhhhhhhccCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q 003778 242 VYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKIPEGSNRLHINKTKLHHAEKMIRGALIELYKGLGYLKTYR 321 (796)
Q Consensus 242 ~~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lk~a~~E~Y~~L~lLksY~ 321 (796)
.| +. . --+.|+.++.++...+.+|.+|.
T Consensus 89 ----------------~~-------------------~~------~-----------~~~~lr~~l~~~~~em~~L~~fs 116 (310)
T KOG1161|consen 89 ----------------PP-------------------SA------E-----------EMKELREELVDFHGEMVLLENFS 116 (310)
T ss_pred ----------------Cc-------------------ch------h-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0 00258999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCChHHHHHhccccCCCChhHHHHHHHHHHHHHHHHhccccH
Q 003778 322 NLNMLAFIKILKKFDKVTGKQVLPIYLKVVESSYFNSSDKVMNLADEVEELFIKHFADENR 382 (796)
Q Consensus 322 ~LN~taF~KIlKKyDK~~~~~~~~~ym~~v~~s~F~~~d~l~~li~~vE~ly~~~F~~gnr 382 (796)
+||+|||+||||||||.++......|..+|...||.+++.+.+|+.+++.+|...++.++-
T Consensus 117 ~LN~tGf~KILKK~DKrtg~~l~~~f~~~l~~~Pf~~~e~~~~Lv~e~~~l~~~l~~~~~~ 177 (310)
T KOG1161|consen 117 RLNYTGFAKILKKHDKRTGYRLRPYFQVRLLHQPFFTTEQLFRLVYEISILLDLLRPSNRN 177 (310)
T ss_pred HHhHHHHHHHHHHHhcccccccccHHHHHHHhCCCchhhhHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999888888999999999999999999999999999998876544
No 6
>COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism]
Probab=99.87 E-value=6.9e-22 Score=212.44 Aligned_cols=168 Identities=26% Similarity=0.353 Sum_probs=136.9
Q ss_pred cchhhhhhhcCchhhHHhhcChhhHHHHHHHhhhhccccCCCCCCCcccccccccccccccccccccccCCCCCCCCCCc
Q 003778 2 VKFSKQFEGQLVPEWKEAFVDYWQLKKDIKKIHLLDNTNNKGNNTSSTKKQKHLSFASTFISSLGKKFSSFGQHQHREHH 81 (796)
Q Consensus 2 mkFgk~l~~q~~peW~~~Yi~Y~~LKk~lk~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (796)
|+||++|++.++|+|+.+||||..||+.||+-..
T Consensus 1 M~Fg~~L~~~ly~p~k~~YinYe~LK~~lK~~~~---------------------------------------------- 34 (509)
T COG5036 1 MRFGKKLKNNLYPPYKYSYINYENLKKLLKESEE---------------------------------------------- 34 (509)
T ss_pred CchhHHHHhccCcccccccCCHHHHHHHHhhccc----------------------------------------------
Confidence 9999999999999999999999999999998210
Q ss_pred cceeeeccccccCCCCCcchhhhhcccCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003778 82 GAIQVHKKLASSASKGDMYETELLEQFADTDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALK 161 (796)
Q Consensus 82 ~~i~v~~~~~~~g~~~~~y~t~~~~~~~~~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~~ 161 (796)
+ | .|++++|.+|++.||.||+||+.|+++|.+|+++|+..|++|.++-+...
T Consensus 35 ----------~-~-------------~w~e~dEsdFVe~Ld~eLeKVY~F~~~k~~ev~erl~~leeq~~~~i~~~---- 86 (509)
T COG5036 35 ----------E-G-------------SWSESDESDFVEELDKELEKVYGFQLSKYSEVMERLRTLEEQTDEAIQEL---- 86 (509)
T ss_pred ----------c-C-------------CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHhhcc----
Confidence 0 1 17788999999999999999999999999999999999999988322110
Q ss_pred hhhcCCCCCCCCCCccccccccccccccchhhhhhhhcCCCCCCCCCCCCCCCCCCCccccccccccccccccccccCCC
Q 003778 162 KKRGKGASSQDSKEDESISCTISCEESIEDRTEQEQLEDNSTDEPETNEVPFADSPRSDEMGKSMRMKRVDSKLSTLSGG 241 (796)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (796)
+ + +
T Consensus 87 -------------d----------------------------------s------~------------------------ 89 (509)
T COG5036 87 -------------D----------------------------------S------D------------------------ 89 (509)
T ss_pred -------------c----------------------------------C------C------------------------
Confidence 0 0 0
Q ss_pred cccccCccccccCCCCCCccccchhhhhhhhhhhccCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q 003778 242 VYNCQGKNLRIKIPLTTPSRTISAVSYLIWDDLVNQSSKKIPEGSNRLHINKTKLHHAEKMIRGALIELYKGLGYLKTYR 321 (796)
Q Consensus 242 ~~~~~~~~~~~~~~~~tp~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lk~a~~E~Y~~L~lLksY~ 321 (796)
.|+ + .+.|--.....|.+|.
T Consensus 90 ----------------~~~---~-----------------------------------------~LeE~L~~v~~l~kF~ 109 (509)
T COG5036 90 ----------------NFP---K-----------------------------------------ILEEELDTVHDLAKFS 109 (509)
T ss_pred ----------------cch---h-----------------------------------------HHHHHHHHHHHHHhhh
Confidence 000 0 0111122566789999
Q ss_pred HHHHHHHHHHHhhhhcccCCCChHHHHHhccccCCCChhHHHHHHHHHHHHHHHHhcccc
Q 003778 322 NLNMLAFIKILKKFDKVTGKQVLPIYLKVVESSYFNSSDKVMNLADEVEELFIKHFADEN 381 (796)
Q Consensus 322 ~LN~taF~KIlKKyDK~~~~~~~~~ym~~v~~s~F~~~d~l~~li~~vE~ly~~~F~~gn 381 (796)
.||+|||.||+|||||.++....+.|..+++..|| .+++.+.|+.++..+|.-.-++++
T Consensus 110 RLN~tGF~KIvKKHDK~~~y~lkpvfqvrLk~~p~-~se~yd~Ll~kis~LY~~lR~~~~ 168 (509)
T COG5036 110 RLNFTGFKKIVKKHDKHTGYSLKPVFQVRLKAKPF-FSEQYDPLLYKISSLYNILRSSLS 168 (509)
T ss_pred hhhhHHHHHHHHhhcCCCCceechhHHHHhccCCc-chhhhcHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999888889999999999 568999999999999988777776
No 7
>COG5408 SPX domain-containing protein [Signal transduction mechanisms]
Probab=99.76 E-value=9.4e-18 Score=177.46 Aligned_cols=55 Identities=31% Similarity=0.475 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHhhhhcccCCCChHHHHHhc
Q 003778 297 HHAEKMIRGALIELYKGLGYLKTYRNLNMLAFIKILKKFDKVTGKQVLPIYLKVV 351 (796)
Q Consensus 297 ~~a~~~Lk~a~~E~Y~~L~lLksY~~LN~taF~KIlKKyDK~~~~~~~~~ym~~v 351 (796)
.+++..|+++++++|..|+.||+|++||+|||+||+|||||.++++....||+..
T Consensus 237 ~q~R~~lkk~ii~~y~~l~~lksf~eLN~tGf~Ki~KK~DK~l~~~~~~~~~s~~ 291 (296)
T COG5408 237 YQKRSLLKKRIIELYIQLHQLKSFIELNYTGFSKITKKYDKTLHQNLRHEYMSRS 291 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Confidence 3578899999999999999999999999999999999999999999999999864
No 8
>COG3872 Predicted metal-dependent enzyme [General function prediction only]
Probab=58.66 E-value=53 Score=35.45 Aligned_cols=91 Identities=19% Similarity=0.269 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHhhcCCCeeEEeeeCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchh
Q 003778 445 SMFSLLFLHLFLYGCN-----IFMWKKARINYSFIFELAPTKELKHRDVFLICTTSMTAVVGVMFVHLSLITKGYSYSQV 519 (796)
Q Consensus 445 ~~f~L~~L~~~l~g~n-----~~iW~~~~INY~fIFe~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 519 (796)
+.|.++++..+.|++. -.+++.+|-.|+-|+....+-+|+...+=.-+.. | -..| .
T Consensus 150 g~~rlilfl~YI~~Is~~~~IkRVFQYHGAEHk~I~~YE~~leLTpenvqk~Srl-----------H---pRCG-----t 210 (318)
T COG3872 150 GFFRLILFLGYIWIISFTPDIKRVFQYHGAEHKVINCYENGLELTPENVQKQSRL-----------H---PRCG-----T 210 (318)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhcCccceeEeeeccCCcCChhHhhhhccc-----------c---cccC-----c
Confidence 3445555556666654 4599999999999998888777766433211100 0 0000 0
Q ss_pred hhhhHHHHHHHHHHHHhcccccchhhhHHHHHHHHHhhcCCc
Q 003778 520 QAIPGLLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNIILSPL 561 (796)
Q Consensus 520 ~~~P~il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril~apf 561 (796)
..+-+.+++.++++++.|++ ..++|+++|+++-|+
T Consensus 211 sFl~~~~iV~i~v~slv~~~-------~lw~Rvv~RiiLlPv 245 (318)
T COG3872 211 SFLLFTMIVGIFVYSLVPFD-------NLWLRVVDRIILLPV 245 (318)
T ss_pred hhhHHHHHHHHHHHHhcccc-------cHHHHHHHHHHHHHH
Confidence 11222345556677778887 356889999988775
No 9
>KOG4466 consensus Component of histone deacetylase complex (breast carcinoma metastasis suppressor 1 protein in human) [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=43.74 E-value=39 Score=36.63 Aligned_cols=47 Identities=23% Similarity=0.167 Sum_probs=38.4
Q ss_pred chHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003778 111 TDATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELK 157 (796)
Q Consensus 111 ~~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r 157 (796)
.+.++.++...+.=.+--..|+-.|++.+.+|+..|+.||++|.+-.
T Consensus 12 ~~~drrr~~~~~e~~~l~~~f~elkeq~yk~kLa~Lq~~Leel~~g~ 58 (291)
T KOG4466|consen 12 SDKDRRRANEESEMSNLEKQFSELKEQMYKDKLAQLQAQLEELGQGT 58 (291)
T ss_pred ccHHHhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 35577787777766666677999999999999999999999988543
No 10
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=40.46 E-value=5.9e+02 Score=28.79 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=18.5
Q ss_pred HHHHHHhhhhcccCCCChHHHHHhcccc-CCCChhHH
Q 003778 327 AFIKILKKFDKVTGKQVLPIYLKVVESS-YFNSSDKV 362 (796)
Q Consensus 327 aF~KIlKKyDK~~~~~~~~~ym~~v~~s-~F~~~d~l 362 (796)
++..+-++|. -|......+++.+..+ .|.--+-+
T Consensus 135 ~~~~~~~q~~--~g~~d~~~l~~~v~~~~~~~v~~li 169 (348)
T PF08733_consen 135 STKVLEEQYY--NGYQDAIELQDLVNNSLEYRVIDLI 169 (348)
T ss_pred HHHHHHHHHH--hCccCHHHHHHHHhCCcceeeHHHH
Confidence 4455556665 4666666777766433 34433333
No 11
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=38.75 E-value=5.1e+02 Score=27.61 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=31.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHhhhhcccCCC
Q 003778 292 NKTKLHHAEKMIRGALIELYKGLGYLKTYRNLNMLAFIKILKKFDKVTGKQ 342 (796)
Q Consensus 292 ~~~~~~~a~~~Lk~a~~E~Y~~L~lLksY~~LN~taF~KIlKKyDK~~~~~ 342 (796)
..++.++++..|+.+-.+|+..-..++ .+|.++||+.-|.+.++
T Consensus 69 reK~~~~I~ssL~eTtkdf~~~~~k~~-------~dF~~~Lq~~Lk~V~td 112 (230)
T PF03904_consen 69 REKNLKEIKSSLEETTKDFIDKTEKVH-------NDFQDILQDELKDVDTD 112 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhhchH
Confidence 345577777788888888887755554 68899999887776543
No 12
>PF03189 Otopetrin: Otopetrin; InterPro: IPR004878 The otopetrins are a group of proteins that are restricted to the metazoa. The structure of otopetrin-1 (Q80VM9 from SWISSPROT) shows it to have 12 transmembrane domains, with three conserved sub-domains (OD-1 to OD-III) []. Otopetrins modulate calcium homeostasis and influx of calcium in response to extracellular ATP. The otopetrins are required for normal formation of otoconia/otoliths in the inner ear. Otoconia are minute biomineral particles embedded in a gelatinous membrane that overlies the sensory epithelium in the inner ear. Gravity and acceleration cause the octoconia to deflect the stereocilia of sensory hair cells. Otoconia are required for normal processing of information regarding spatial orientation and acceleration.
Probab=33.43 E-value=5.4e+02 Score=30.06 Aligned_cols=10 Identities=40% Similarity=0.733 Sum_probs=7.4
Q ss_pred HHHHHHHHHH
Q 003778 403 FIGLFTGCFI 412 (796)
Q Consensus 403 ~~Glf~G~~~ 412 (796)
..|+|+|..+
T Consensus 239 ~~Glf~Gil~ 248 (441)
T PF03189_consen 239 SKGLFLGILV 248 (441)
T ss_pred chhHHHHHHH
Confidence 3599999754
No 13
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=29.34 E-value=74 Score=27.04 Aligned_cols=38 Identities=21% Similarity=0.407 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHhhcCCcc
Q 003778 525 LLLLIFLLLLVCPFNIFYRSSRYCFLRVIRNIILSPLY 562 (796)
Q Consensus 525 il~~~~l~~l~~P~~i~y~~~R~~~l~~l~ril~apf~ 562 (796)
+=++++.+++++|...+.++...+..+.+.+.+++|=|
T Consensus 7 iQii~l~AlI~~pLGyl~~~~~~r~~~~lr~~l~~PRy 44 (62)
T PF11120_consen 7 IQIIILCALIFFPLGYLARRWLPRIRRTLRRRLFPPRY 44 (62)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHhcCccc
Confidence 34455666778888877888878888888888888865
No 14
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=28.90 E-value=6.6e+02 Score=25.90 Aligned_cols=12 Identities=8% Similarity=0.047 Sum_probs=6.1
Q ss_pred cHHHHHHH-hccc
Q 003778 381 NRRKAMKY-LKIH 392 (796)
Q Consensus 381 nrkkA~~~-LR~~ 392 (796)
|.+...++ +++.
T Consensus 54 ~P~~~a~eli~~~ 66 (206)
T PF06570_consen 54 DPKEYADELIKPL 66 (206)
T ss_pred CHHHHHHHHhccc
Confidence 66554444 4443
No 15
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=27.37 E-value=3.3e+02 Score=27.16 Aligned_cols=12 Identities=33% Similarity=0.296 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHH
Q 003778 405 GLFTGCFIALLA 416 (796)
Q Consensus 405 Glf~G~~~~L~~ 416 (796)
|||+|+.++-++
T Consensus 37 ~L~~~M~~~y~~ 48 (155)
T PF10777_consen 37 YLCLAMYAAYLA 48 (155)
T ss_pred HHHHHHHHHHHH
Confidence 788776655443
No 16
>PF14193 DUF4315: Domain of unknown function (DUF4315)
Probab=26.14 E-value=1.5e+02 Score=26.60 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=29.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003778 118 FECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELK 157 (796)
Q Consensus 118 ~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r 157 (796)
..+++.|++|+. +|-.|+.+|+..|+.|..++=+.-
T Consensus 3 leKi~~eieK~k----~Kiae~Q~rlK~Le~qk~E~EN~E 38 (83)
T PF14193_consen 3 LEKIRAEIEKTK----EKIAELQARLKELEAQKTEAENLE 38 (83)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999986 788899999999998887765554
No 17
>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function. The region featured in this family is approximately 100 amino acids long.
Probab=25.13 E-value=3.3e+02 Score=26.43 Aligned_cols=52 Identities=13% Similarity=0.266 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003778 112 DATKEFFECLDMQLNKVNQFYKAKEKEFLDRGESLKKQMEILIELKTALKKK 163 (796)
Q Consensus 112 ~~e~~F~~~LD~El~KV~~Fy~~K~~e~~~r~~~L~~q~~~l~~~r~~~~~~ 163 (796)
..-.+....+-.+|++|.+=-..--.++..|++.|..++++..+.-+...++
T Consensus 39 r~m~~A~~~v~kql~~vs~~l~~tKkhLsqRId~vd~klDe~~ei~~~i~~e 90 (126)
T PF07889_consen 39 RSMSDAVASVSKQLEQVSESLSSTKKHLSQRIDRVDDKLDEQKEISKQIKDE 90 (126)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4467889999999999999999999999999999999999998876555433
No 18
>PF04133 Vps55: Vacuolar protein sorting 55 ; InterPro: IPR007262 Vps55 is involved in the secretion of the Golgi form of the soluble vacuolar carboxypeptidase Y, but not the trafficking of the membrane-bound vacuolar alkaline phosphatase. Both Vps55 and obesity receptor gene-related protein are important for functioning membrane trafficking to the vacuole/lysosome of eukaryotic cells [].
Probab=23.91 E-value=1.5e+02 Score=28.47 Aligned_cols=75 Identities=20% Similarity=0.371 Sum_probs=42.8
Q ss_pred hhHHHHHhHHHHHHHHhHHHhhccCCc----hhHhHHHHHHHHHHHHHH----HHHhhccCCcchhhHHHHH----hhhh
Q 003778 614 LAYAVSFLPYYWRAMQCARRWFDEGQT----SHLINLGKYVSAMLAAGA----KVVYEKERSVGWLCLVVVV----SSGA 681 (796)
Q Consensus 614 l~~i~~~lP~~~R~~QClRRy~dt~~~----~hL~Na~KY~ssi~~~~~----~~~y~~~~~~~w~~~~ii~----s~in 681 (796)
+.++++-+|.++ -||+.++.++ -.....+|+.++.+++.. ...||..- ..|-.++... .+..
T Consensus 32 ~~y~laPiP~~i-----~~~~~~~~~~~~~~~~~~d~~~FlT~~~vvSg~aLP~VL~H~~~-I~~~A~~l~l~g~~ii~~ 105 (120)
T PF04133_consen 32 LFYVLAPIPNLI-----ARRYSSDDDFSSDSGSCQDFGKFLTGFLVVSGFALPIVLAHAGI-IQWGACGLSLAGGVIIYA 105 (120)
T ss_pred HHHHHHhhhHHH-----HCCCCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhhHHHHH
Confidence 456788889887 4666654332 238999999998766422 12233321 2233322111 1345
Q ss_pred hhhhhhhhhhhhc
Q 003778 682 TVYQLYWDFVKDW 694 (796)
Q Consensus 682 siYs~~WDv~mDW 694 (796)
|++.+.|-...||
T Consensus 106 ti~~f~~~f~~~d 118 (120)
T PF04133_consen 106 TIIGFFWFFGEED 118 (120)
T ss_pred HHHHHHhhccCcC
Confidence 7788887766665
No 19
>PHA03048 IMV membrane protein; Provisional
Probab=23.47 E-value=3.1e+02 Score=25.01 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 003778 402 FFIGLFTGCFIALLAGYVIMAHI 424 (796)
Q Consensus 402 F~~Glf~G~~~~L~~~~~i~~~~ 424 (796)
++.|.++|+. .|+++-||.+++
T Consensus 10 y~S~vli~GI-iLL~~aCIfAfi 31 (93)
T PHA03048 10 YFSTALIGGI-ILLAASCIFAFV 31 (93)
T ss_pred ccchHHHHHH-HHHHHHHHHhhh
Confidence 4567666643 355555666655
No 20
>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure. It plays a role in dimerisation []. ; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1WT6_D.
Probab=22.35 E-value=4.9e+02 Score=22.10 Aligned_cols=44 Identities=23% Similarity=0.231 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 003778 113 ATKEFFECLDMQLNKVNQFY---KAKEKEFLDRGESLKKQMEILIEL 156 (796)
Q Consensus 113 ~e~~F~~~LD~El~KV~~Fy---~~K~~e~~~r~~~L~~q~~~l~~~ 156 (796)
.|-.=-..+-.||+||-+=+ .+|-.|...|-..|+.+++.|...
T Consensus 8 ~EirakQ~~~eEL~kvk~~n~~~e~kLqeaE~rn~eL~~ei~~L~~e 54 (61)
T PF08826_consen 8 AEIRAKQAIQEELTKVKSANLAFESKLQEAEKRNRELEQEIERLKKE 54 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455567888898876544 345556666666666666666544
No 21
>PF15389 DUF4612: Domain of unknown function (DUF4612)
Probab=22.25 E-value=64 Score=30.69 Aligned_cols=18 Identities=28% Similarity=0.636 Sum_probs=15.1
Q ss_pred CchHHHHHHHHHHHHHhH
Q 003778 110 DTDATKEFFECLDMQLNK 127 (796)
Q Consensus 110 ~~~~e~~F~~~LD~El~K 127 (796)
-.+-.++||++||+-++|
T Consensus 87 iS~SQqdFFRMLDeKIek 104 (115)
T PF15389_consen 87 ISESQQDFFRMLDEKIEK 104 (115)
T ss_pred hhHHHHHHHHHHHHHHHc
Confidence 356789999999998876
No 22
>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology. Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane
Probab=20.74 E-value=4e+02 Score=33.57 Aligned_cols=62 Identities=24% Similarity=0.472 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcccc-CC----------CC--cc-hhhhh---hhHHHHHHHHHHHHHHHHHHHH
Q 003778 401 TFFIGLFTGCFIALLAGYVIMAHITGMYR-PR----------PD--TV-YMETV---YPVLSMFSLLFLHLFLYGCNIF 462 (796)
Q Consensus 401 ~F~~Glf~G~~~~L~~~~~i~~~~~~~~~-~~----------~~--~~-y~~~~---~p~~~~f~L~~L~~~l~g~n~~ 462 (796)
.+.+|+.+.|.+.|++++.++..+.|... .. ++ .. .|..+ |=+++.+.++.+..|+.|.|+|
T Consensus 413 R~~~~lil~~~llLIv~~~~lGLl~G~~G~~~~~~p~~r~c~~~tGg~~Lm~gv~~~Flf~~~l~l~~~~~Fl~G~~~~ 491 (806)
T PF05478_consen 413 RWIVGLILCCVLLLIVLCLLLGLLCGCCGYRRRADPTDRGCSSNTGGNFLMAGVGLSFLFSWFLMLLVLFYFLVGGNTY 491 (806)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45667777666655555544545555543 11 01 12 22222 2233344466777888898875
No 23
>KOG1281 consensus Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters [Inorganic ion transport and metabolism]
Probab=20.60 E-value=89 Score=37.51 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhHHhHHHHHHHHHHHHHhhhhcccCCCC
Q 003778 303 IRGALIELYKGLGYLKTYRNLNMLAFIKILKKFDKVTGKQV 343 (796)
Q Consensus 303 Lk~a~~E~Y~~L~lLksY~~LN~taF~KIlKKyDK~~~~~~ 343 (796)
+|+.+.. .+..+++|..+|++++.|+.||.||..+.+.
T Consensus 3 ~~~~~~~---~l~~~~~~~~~~~~~ll~~p~~~~~~l~~~~ 40 (586)
T KOG1281|consen 3 LKRKIVN---TLLQYRSLLVLNRTPLLLLPKKLDKLLHSSE 40 (586)
T ss_pred hhHHHHH---HHHHhhhhheeehhhhhhcchhhhhhcCCcH
Confidence 3444444 8888999999999999999999999998875
Done!