BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003780
(796 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 152/292 (52%), Gaps = 18/292 (6%)
Query: 488 RIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQN 547
R + ++ A+++F K +G GG+G VYK +L +G +VA+K+L T+ FQ
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQT 76
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV-LDWTMRVNI 606
E ++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW R I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD-SDSSNRTIVA 665
A L+YLH C P I+HRD+ + NILL+ + EA V DFG A+L+D D V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVL 725
G G+IAPE T +EK DV+ +GV+ LE++ G+ D +ML+D +
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR----AFDLARLANDDDVMLLDWV 252
Query: 726 -----DSRLSPPVDRMVM-----QDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
+ +L VD + +++ + VAL C S P RP M V +
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 152/292 (52%), Gaps = 18/292 (6%)
Query: 488 RIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQN 547
R + ++ A+++F K +G GG+G VYK +L +G +VA+K+L + FQ
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQT 84
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV-LDWTMRVNI 606
E ++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW R I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD-SDSSNRTIVA 665
A L+YLH C P I+HRD+ + NILL+ + EA V DFG A+L+D D V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVL 725
GT G+IAPE T +EK DV+ +GV+ LE++ G+ D +ML+D +
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT----GQRAFDLARLANDDDVMLLDWV 260
Query: 726 -----DSRLSPPVDRMVM-----QDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
+ +L VD + +++ + VAL C S P RP M V +
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 164/348 (47%), Gaps = 29/348 (8%)
Query: 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLN 158
L+ L L+ N G IP + S+L L SFN L+G+IP LGSL L L L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 159 GAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKN 218
G IP L + L T+ L N L G IPS + + G + + +G+L+N
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 219 LVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDM------ 272
L L + N G IP+ L +L +L L++N NG+IP + +G + +
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 572
Query: 273 ----------------SMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLK 316
++ +G +L RLS +I+S + G T S+
Sbjct: 573 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 632
Query: 317 GLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKLNGT 375
LD+S N LSG IP EIG L + L +N++SGSIP E+G L L LDLS NKL+G
Sbjct: 633 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 692
Query: 376 IP---PFLYHRFPLDLSYNDLEGEIPD---YFRDSPFKVYGNQGICYF 417
IP L +DLS N+L G IP+ + P K N G+C +
Sbjct: 693 IPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 740
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 25/315 (7%)
Query: 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFN 131
+S+ ++L E K GE+ F L L L N+ +G++P G+ S L L S N
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 325
Query: 132 NLTGSIPPE-LGSLRNLEVLNLKGNNLNGAIPSSLCQLT-KLITMALSRNGLHGPIPSAI 189
N +G +P + L +R L+VL+L N +G +P SL L+ L+T+ LS N GPI
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---- 381
Query: 190 GDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLH 249
+ L+ L N N G IP TL + L L+L
Sbjct: 382 ---------------LPNLCQNPKNTLQELYLQN---NGFTGKIPPTLSNCSELVSLHLS 423
Query: 250 SNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITI 309
N+L+G+IP +G+++ + + + +N +EG IP EL + L L + N L+G+IP +
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 310 AGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMK-LEYLDLS 368
+ +L + LSNN+L+G IP IG+ L + L NN+ SG+IP E+G + L +LDL+
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 543
Query: 369 HNKLNGTIPPFLYHR 383
N NGTIP ++ +
Sbjct: 544 TNLFNGTIPAAMFKQ 558
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 157/370 (42%), Gaps = 60/370 (16%)
Query: 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGS---------------------- 136
LE L + N IP +G S L++LD S N L+G
Sbjct: 199 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
Query: 137 --IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT-MALSRNGLHGPIPSAIGDXX 193
IPP L++L+ L+L N G IP L +T + LS N +G +P G
Sbjct: 258 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 194 XXXXXXXXXXXXXGMLHQE-LGKLKNLVALNVGGNKLMGPIPSTLFRLT----------- 241
G L + L K++ L L++ N+ G +P +L L+
Sbjct: 316 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 242 ----------------NLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLEL 285
L LYL +N G IPP + N + ++ + +S N + GTIP L
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 286 TRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLR 345
LS+L L + NML G+IP + + +L+ L L N L+G IP + C+ L I+L
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Query: 346 NNNLSGSIPPEIG-LMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPDYF 401
NN L+G IP IG L L L LS+N +G IP L LDL+ N G IP
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 402 RDSPFKVYGN 411
K+ N
Sbjct: 556 FKQSGKIAAN 565
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 167/357 (46%), Gaps = 41/357 (11%)
Query: 55 SNSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLS--LRFNYLFGS 112
S++ + C DGVTC + + I+L K L S + S S L +++ GS
Sbjct: 31 SSNKNPCTFDGVTCRDDK-VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGS 89
Query: 113 IPSQVGALSKLRYLDFSFNNLTGSIPP--ELGSLRNLEVLNLKGNNLN--GAIPSSLCQL 168
+ S + L LD S N+L+G + LGS L+ LN+ N L+ G + L +L
Sbjct: 90 V-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KL 147
Query: 169 TKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNK 228
L + LS N + G + +G +L G+LK+L + GNK
Sbjct: 148 NSLEVLDLSANSISGA--NVVG----------------WVLSDGCGELKHLA---ISGNK 186
Query: 229 LMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRL 288
+ G + + R NL +L + SN+ + IP +G+ + + +D+S N + G ++
Sbjct: 187 ISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTC 243
Query: 289 SQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEI-GKCSELRNITLRNN 347
++L L+ISSN G IP L SL+ L L+ NK +G IP + G C L + L N
Sbjct: 244 TELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGN 301
Query: 348 NLSGSIPPEIGLMKLEYLDLSH-NKLNGTIP--PFLYHRF--PLDLSYNDLEGEIPD 399
+ G++PP G L N +G +P L R LDLS+N+ GE+P+
Sbjct: 302 HFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 358
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQ 211
L +++NG++ C L ++ LSRN L GP+ +
Sbjct: 81 LSNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPVTTLT---------------------- 117
Query: 212 ELGKLKNLVALNVGGNKLMGPIP-STLFRLTNLTYLYLHSNHLNGS--IPPEIGNMTGIL 268
LG L LNV N L P S +L +L L L +N ++G+ + + + G L
Sbjct: 118 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 177
Query: 269 K-VDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSG 327
K + +S N I G + +++R L +L +SSN S IP + +L+ LD+S NKLSG
Sbjct: 178 KHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 234
Query: 328 PIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLYHRFP-- 385
I C+EL+ + + +N G IPP + L L+YL L+ NK G IP FL
Sbjct: 235 DFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYLSLAENKFTGEIPDFLSGACDTL 293
Query: 386 --LDLSYNDLEGEIPDYF 401
LDLS N G +P +F
Sbjct: 294 TGLDLSGNHFYGAVPPFF 311
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 25/315 (7%)
Query: 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFN 131
+S+ ++L E K GE+ F L L L N+ +G++P G+ S L L S N
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 132 NLTGSIPPE-LGSLRNLEVLNLKGNNLNGAIPSSLCQLT-KLITMALSRNGLHGPIPSAI 189
N +G +P + L +R L+VL+L N +G +P SL L+ L+T+ LS N GPI
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---- 384
Query: 190 GDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLH 249
+ L+ L N N G IP TL + L L+L
Sbjct: 385 ---------------LPNLCQNPKNTLQELYLQN---NGFTGKIPPTLSNCSELVSLHLS 426
Query: 250 SNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITI 309
N+L+G+IP +G+++ + + + +N +EG IP EL + L L + N L+G+IP +
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 310 AGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMK-LEYLDLS 368
+ +L + LSNN+L+G IP IG+ L + L NN+ SG+IP E+G + L +LDL+
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546
Query: 369 HNKLNGTIPPFLYHR 383
N NGTIP ++ +
Sbjct: 547 TNLFNGTIPAAMFKQ 561
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 164/348 (47%), Gaps = 29/348 (8%)
Query: 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLN 158
L+ L L+ N G IP + S+L L SFN L+G+IP LGSL L L L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 159 GAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKN 218
G IP L + L T+ L N L G IPS + + G + + +G+L+N
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 219 LVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDM------ 272
L L + N G IP+ L +L +L L++N NG+IP + +G + +
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 273 ----------------SMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLK 316
++ +G +L RLS +I+S + G T S+
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 317 GLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKLNGT 375
LD+S N LSG IP EIG L + L +N++SGSIP E+G L L LDLS NKL+G
Sbjct: 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 376 IP---PFLYHRFPLDLSYNDLEGEIPD---YFRDSPFKVYGNQGICYF 417
IP L +DLS N+L G IP+ + P K N G+C +
Sbjct: 696 IPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 157/370 (42%), Gaps = 60/370 (16%)
Query: 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGS---------------------- 136
LE L + N IP +G S L++LD S N L+G
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 137 --IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT-MALSRNGLHGPIPSAIGDXX 193
IPP L++L+ L+L N G IP L +T + LS N +G +P G
Sbjct: 261 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 194 XXXXXXXXXXXXXGMLHQE-LGKLKNLVALNVGGNKLMGPIPSTLFRLT----------- 241
G L + L K++ L L++ N+ G +P +L L+
Sbjct: 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 242 ----------------NLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLEL 285
L LYL +N G IPP + N + ++ + +S N + GTIP L
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 286 TRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLR 345
LS+L L + NML G+IP + + +L+ L L N L+G IP + C+ L I+L
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Query: 346 NNNLSGSIPPEIG-LMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPDYF 401
NN L+G IP IG L L L LS+N +G IP L LDL+ N G IP
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 402 RDSPFKVYGN 411
K+ N
Sbjct: 559 FKQSGKIAAN 568
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 167/357 (46%), Gaps = 41/357 (11%)
Query: 55 SNSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLS--LRFNYLFGS 112
S++ + C DGVTC + + I+L K L S + S S L +++ GS
Sbjct: 34 SSNKNPCTFDGVTCRDDK-VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGS 92
Query: 113 IPSQVGALSKLRYLDFSFNNLTGSIPP--ELGSLRNLEVLNLKGNNLN--GAIPSSLCQL 168
+ S + L LD S N+L+G + LGS L+ LN+ N L+ G + L +L
Sbjct: 93 V-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KL 150
Query: 169 TKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNK 228
L + LS N + G + +G +L G+LK+L + GNK
Sbjct: 151 NSLEVLDLSANSISGA--NVVG----------------WVLSDGCGELKHLA---ISGNK 189
Query: 229 LMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRL 288
+ G + + R NL +L + SN+ + IP +G+ + + +D+S N + G ++
Sbjct: 190 ISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTC 246
Query: 289 SQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEI-GKCSELRNITLRNN 347
++L L+ISSN G IP L SL+ L L+ NK +G IP + G C L + L N
Sbjct: 247 TELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGN 304
Query: 348 NLSGSIPPEIGLMKLEYLDLSH-NKLNGTIP--PFLYHRF--PLDLSYNDLEGEIPD 399
+ G++PP G L N +G +P L R LDLS+N+ GE+P+
Sbjct: 305 HFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQ 211
L +++NG++ C L ++ LSRN L GP+ +
Sbjct: 84 LSNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPVTTLT---------------------- 120
Query: 212 ELGKLKNLVALNVGGNKLMGPIP-STLFRLTNLTYLYLHSNHLNGS--IPPEIGNMTGIL 268
LG L LNV N L P S +L +L L L +N ++G+ + + + G L
Sbjct: 121 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 180
Query: 269 K-VDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSG 327
K + +S N I G + +++R L +L +SSN S IP + +L+ LD+S NKLSG
Sbjct: 181 KHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237
Query: 328 PIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLYHRFP-- 385
I C+EL+ + + +N G IPP + L L+YL L+ NK G IP FL
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYLSLAENKFTGEIPDFLSGACDTL 296
Query: 386 --LDLSYNDLEGEIPDYF 401
LDLS N G +P +F
Sbjct: 297 TGLDLSGNHFYGAVPPFF 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 117/217 (53%), Gaps = 9/217 (4%)
Query: 488 RIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQN 547
R+ D+ +AT +FD K+ IG G +G VYK L +G VALK R E + F+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIEEFET 84
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNI 606
E LS H ++V L GFC + M LIYKYM+ G+L L +D + + W R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL-LDSDSSN-RTIV 664
A L YLH +I+HRD+ S NILL+ + DFG ++ + D ++ +V
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGR 701
GT GYI PE +TEK DVYSFGVV EVL R
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 113/217 (52%), Gaps = 9/217 (4%)
Query: 488 RIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQN 547
R+ D+ +AT +FD K+ IG G +G VYK L +G VALK R E + F+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIEEFET 84
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNI 606
E LS H ++V L GFC + M LIYKYM+ G+L L +D + + W R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR--TIV 664
A L YLH +I+HRD+ S NILL+ + DFG ++ +V
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGR 701
GT GYI PE +TEK DVYSFGVV EVL R
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRA---ETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G GG+G VYK + N VA+KKL TEE F E V++K H N+V+L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 95
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
GF + L+Y YM GSL L L W MR I + AN +++LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI----VAGTYGYIAPELAYTM 679
+HRDI S NILL+ A ++DFG AR S+ +T+ + GT Y+APE A
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPE-ALRG 209
Query: 680 VVTEKCDVYSFGVVALEVLMG-------RHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
+T K D+YSFGVV LE++ G R P + D++ + D +D +++
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
V + +VA CLH K RP +++V Q
Sbjct: 269 DSTSVEA----MYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRA---ETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G GG+G VYK + N VA+KKL TEE F E V++K H N+V+L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 95
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
GF + L+Y YM GSL L L W MR I + AN +++LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI----VAGTYGYIAPELAYTM 679
+HRDI S NILL+ A ++DFG AR S+ +T+ + GT Y+APE A
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXSRIVGTTAYMAPE-ALRG 209
Query: 680 VVTEKCDVYSFGVVALEVLMG-------RHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
+T K D+YSFGVV LE++ G R P + D++ + D +D +++
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
V + +VA CLH K RP +++V Q
Sbjct: 269 DSTSVEA----MYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 133/273 (48%), Gaps = 24/273 (8%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRA---ETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G GG+G VYK + N VA+KKL TEE F E V++K H N+V+L
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 89
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
GF + L+Y YM GSL L L W MR I + AN +++LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVV 681
+HRDI S NILL+ A ++DFG AR + + + GT Y+APE A +
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEI 205
Query: 682 TEKCDVYSFGVVALEVLMG-------RHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVD 734
T K D+YSFGVV LE++ G R P + D++ + D +D +++
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMNDADS 264
Query: 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
V + +VA CLH K RP +++V Q
Sbjct: 265 TSVEA----MYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y RG ++ L+ + D I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y RG ++ L+ + D I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 148
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ N K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 126
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 121
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + SS RT ++GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 139
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 119
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +A+FG + + + SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 485 YDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS 544
+ G + +D+ D +IK IG G +G+V++A+ +G VA+K L + N
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERV-NE 80
Query: 545 FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV 604
F E ++ ++ H NIV G + ++ +Y+ RGSL+ L LD R+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
++ VA ++YLH+ P IVHRD+ S N+L++ K V DFG +RL S
Sbjct: 141 SMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +A+FG + + + SS RT + GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
EK D++S GV+ E L+G+ P E
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ R + D I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
A EDF+I +G G +G+VY A+ K ++ALK L +A+ E+ + + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI++LYG+ ++LI +Y G+++ L+ + D I +ANALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 148
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
Y H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G+ P E
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 9/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDFDI +G G +G+VY A+ K ++ALK L + + E+ + + E + S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++LYG+ ++LI +Y G+++ R + D I +ANALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+LL S E +ADFG + + + SS RT + GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G P E
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 485 YDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS 544
+ G + +D+ D +IK IG G +G+V++A+ +G VA+K L + N
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERV-NE 80
Query: 545 FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV 604
F E ++ ++ H NIV G + ++ +Y+ RGSL+ L LD R+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
++ VA ++YLH+ P IVHR++ S N+L++ K V DFG +RL S +
Sbjct: 141 SMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 127/272 (46%), Gaps = 24/272 (8%)
Query: 508 GTGGYGSVYKAQLPNGKVVALKKLHRA---ETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
G GG+G VYK + N VA+KKL TEE F E V +K H N+V+L
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK--QQFDQEIKVXAKCQHENLVELL 87
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
GF + L+Y Y GSL L L W R I + AN +++LH +
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRDI S NILL+ A ++DFG AR + + + + GT Y APE A +T
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEIT 203
Query: 683 EKCDVYSFGVVALEVLMG-------RHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDR 735
K D+YSFGVV LE++ G R P + D++ + D +D + +
Sbjct: 204 PKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKXNDADST 262
Query: 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
V +VA CLH K RP +++V Q
Sbjct: 263 SVE----AXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 9/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDFDI +G G +G+VY A+ K ++ALK L + + E+ + + E + S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++LYG+ ++LI +Y G+++ R + D I +ANALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+LL S E +ADFG + + + SS R + GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++S GV+ E L+G P E
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 127/264 (48%), Gaps = 35/264 (13%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSVYKA--QLPNGK--VVALKKLHRAETE 537
FED +A +F I+ IG G +G V +LP + VA+K L TE
Sbjct: 16 FEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 75
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F +EA ++ + H N++ L G + +I ++M+ GSL FLR ND +
Sbjct: 76 KQR--RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A + YL + VHRD+++ NIL+NS L V+DFG +R L+
Sbjct: 134 VI---QLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 657 DSSNRTIVAGTYG-----YIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXX 710
D+S+ T + G + APE T DV+S+G+V EV+ G P
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP------- 240
Query: 711 XXXXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ D RL PP+D
Sbjct: 241 YWDMTNQDVINAIEQDYRLPPPMD 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+ ++ IG GG+G VY+A +V H + + + + + EA + + + H N
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY--EAVVLDWTMRVNIIKCVANALSYL 617
I+ L G CL + + L+ ++ + G L L ++++W ++ +A ++YL
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLE--------AFVADFGTARLLDSDSSNRTIVAGTYG 669
H + + I+HRD+ S+NIL+ K+E + DFG AR + + + AG Y
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYA 179
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
++APE+ + ++ DV+S+GV+ E+L G P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DFDI +G G +G+VY A+ K ++ALK L +++ E+ + + E + S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+++Y + +K ++L+ ++ RG L+ L+ D ++ +A+AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYC 131
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+L+ K E +ADFG + + + S R + GT Y+ PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
EK D++ GV+ E L+G P
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DFDI +G G +G+VY A+ K ++ALK L +++ E+ + + E + S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+++Y + +K ++L+ ++ RG L+ L+ D ++ +A+AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYC 130
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+L+ K E +ADFG + + + S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
EK D++ GV+ E L+G P
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 506 CIGTGGYGSVYKAQLP--NGKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
IG G +G VYK L +GK VA+K L TE+ F EA ++ + +H NI
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNI 108
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYLHH 619
++L G K M +I +YM+ G+L FLR D E VL V +++ +A + YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL---VGMLRGIAAGMKYLAN 165
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPELA 676
+ VHRD+++ NIL+NS L V+DFG +R+L+ D +G + APE
Sbjct: 166 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 677 YTMVVTEKCDVYSFGVVALEVLM-GRHP 703
T DV+SFG+V EV+ G P
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DFDI +G G +G+VY A+ K ++ALK L +++ E+ + + E + S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+++Y + +K ++L+ ++ RG L+ L+ D ++ +A+AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYC 130
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+L+ K E +ADFG + + + S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
EK D++ GV+ E L+G P
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 503 IKYCIGTGGYGSVYKAQL--PNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I+ IG G +G V + +L P K VA+K L TE F +EA ++ + H
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHP 75
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G + + ++ ++M+ G+L FLR ND + V+ V +++ +A+ + YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYL 132
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIA 672
S VHRD+++ NIL+NS L V+DFG +R L+ +SS+ T + G + A
Sbjct: 133 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSP 731
PE T D +S+G+V EV+ G P +Q ++ D RL P
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMSNQDVINAIEQDYRLPP 242
Query: 732 PVD 734
P D
Sbjct: 243 PPD 245
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 9/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+I +G G +G+VY A+ +VALK L +++ E+ + + E + + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++LY + ++ ++LI +Y RG L+ L+ ++ D I++ +A+AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYC 139
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H ++HRDI N+LL K E +ADFG + + + S R + GT Y+ PE+
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ EK D++ GV+ E+L+G P E
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 31/259 (11%)
Query: 492 EDIIKATEDFDIKYC-----IGTGGYGSVYKAQL--PNGK--VVALKKLHRAETEETTFF 542
E + + ++ D+ Y IG G +G V + +L P K VA+K L TE
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-- 61
Query: 543 NSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWT 601
F +EA ++ + H NI++L G + + ++ ++M+ G+L FLR ND + V+
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL- 120
Query: 602 MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661
V +++ +A+ + YL S VHRD+++ NIL+NS L V+DFG +R L+ +SS+
Sbjct: 121 --VGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 662 TIVAGTYG-----YIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
T + G + APE T D +S+G+V EV+ G P
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMS 228
Query: 716 DQKIMLIDVLDSRLSPPVD 734
+Q ++ D RL PP D
Sbjct: 229 NQDVINAIEQDYRLPPPPD 247
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 20/219 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKL----HRAETEETTFFNSFQNEAHV 551
A + + + IG GG+G V+K +L K VVA+K L ETE F FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+S + H NIVKLYG + M + +++ G L+ L + +A + W++++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLE-----AFVADFGTARLLDSDSSNRTIVAG 666
+ Y+ + P IVHRD+ S NI L S E A VADFGT++ S + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG---LLG 188
Query: 667 TYGYIAPEL--AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ ++APE A TEK D YSF ++ +L G P
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKL----HRAETEETTFFNSFQNEAHV 551
A + + + IG GG+G V+K +L K VVA+K L ETE F FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+S + H NIVKLYG + M + +++ G L+ L + +A + W++++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLE-----AFVADFGTARLLDSDSSNRTIVAG 666
+ Y+ + P IVHRD+ S NI L S E A VADFG L + + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---LSQQSVHSVSGLLG 188
Query: 667 TYGYIAPEL--AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ ++APE A TEK D YSF ++ +L G P
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 26/243 (10%)
Query: 503 IKYCIGTGGYGSVYKA--QLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I+ IG G +G V +LP + VA+K L TE+ F +EA ++ + H
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHP 68
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
N++ L G + +I ++M+ GSL FLR ND + V+ V +++ +A + YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL 125
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIA 672
+ VHR +++ NIL+NS L V+DFG +R L+ D+S+ T + G + A
Sbjct: 126 AD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSP 731
PE T DV+S+G+V EV+ G P +Q ++ D RL P
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMTNQDVINAIEQDYRLPP 235
Query: 732 PVD 734
P+D
Sbjct: 236 PMD 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 34/276 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ +++ +G G +G V KA+ K VA+K++ +E+E F + LS++ H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQ----LSRVNHP 62
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRND-----YEAV-VLDWTMRVNIIKCVAN 612
NIVKLYG CL+ C L+ +Y + GSL+ L Y A + W ++ +
Sbjct: 63 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQ 114
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYI 671
++YLH +++HRD+ N+LL + + DFGTA + + +N G+ ++
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWM 171
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSP 731
APE+ +EKCDV+S+G++ EV+ R P + +IM + + P
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-----RIMW--AVHNGTRP 224
Query: 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
P+ + + + I + T C P RP+M+ + +
Sbjct: 225 PLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 34/276 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ +++ +G G +G V KA+ K VA+K++ +E+E F + LS++ H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQ----LSRVNHP 61
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRND-----YEAV-VLDWTMRVNIIKCVAN 612
NIVKLYG CL+ C L+ +Y + GSL+ L Y A + W ++ +
Sbjct: 62 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQ 113
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYI 671
++YLH +++HRD+ N+LL + + DFGTA + + +N G+ ++
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWM 170
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSP 731
APE+ +EKCDV+S+G++ EV+ R P + +IM + + P
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-----RIMW--AVHNGTRP 223
Query: 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
P+ + + + I + T C P RP+M+ + +
Sbjct: 224 PLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVK 256
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ +YM+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG AR+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSVYKAQL--PNGK--VVALKKLHRAETE 537
FED +A +F I+ IG G +G V +L P + VA+K L T+
Sbjct: 12 FEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD 71
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F +EA ++ + H NI+ L G K + +I +YM+ GSL FLR ND
Sbjct: 72 KQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ + + + YL S VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 130 VI---QLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + APE T DV+S+G+V EV+ G P
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YW 236
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 237 DMSNQDVIKAIEEGYRLPPPMD 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ +YM+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKL----HRAETEETTFFNSFQNEAHV 551
A + + + IG GG+G V+K +L K VVA+K L ETE F FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+S + H NIVKLYG + M + +++ G L+ L + +A + W++++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLE-----AFVADFGTARLLDSDSSNRTIVAG 666
+ Y+ + P IVHRD+ S NI L S E A VADF L + + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFS---LSQQSVHSVSGLLG 188
Query: 667 TYGYIAPEL--AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ ++APE A TEK D YSF ++ +L G P
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 40/267 (14%)
Query: 113 IPSQVGALSKLRYLDFSF----NNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQL 168
IPS +L+ L YL+F + NNL G IPP + L L L + N++GAIP L Q+
Sbjct: 68 IPS---SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 169 TKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNK 228
L+T+ S N L G +P +I L NLV + GN+
Sbjct: 125 KTLVTLDFSYNALSGTLPPSIS------------------------SLPNLVGITFDGNR 160
Query: 229 LMGPIPSTLFRLTNL-TYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTR 287
+ G IP + + L T + + N L G IPP N+ + VD+S N +EG +
Sbjct: 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGS 219
Query: 288 LSQLLYLSISSNMLS---GQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITL 344
+ ++ N L+ G++ ++ +L GLDL NN++ G +P + + L ++ +
Sbjct: 220 DKNTQKIHLAKNSLAFDLGKVGLSK----NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 345 RNNNLSGSIPPEIGLMKLEYLDLSHNK 371
NNL G IP L + + ++NK
Sbjct: 276 SFNNLCGEIPQGGNLQRFDVSAYANNK 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 212 ELGKLKNLVALNVGG-NKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKV 270
L L L L +GG N L+GPIP + +LT L YLY+ +++G+IP + + ++ +
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 271 DMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISL-KGLDLSNNKLSGPI 329
D S N + GT+P ++ L L+ ++ N +SG IP + L + +S N+L+G I
Sbjct: 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190
Query: 330 PPE-----------------------IGKCSELRNITLRNNNLSGSIPPEIGLMK-LEYL 365
PP G + I L N+L+ + ++GL K L L
Sbjct: 191 PPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGL 249
Query: 366 DLSHNKLNGTIPPFLYH-RF--PLDLSYNDLEGEIP 398
DL +N++ GT+P L +F L++S+N+L GEIP
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 29/170 (17%)
Query: 232 PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQL 291
PIPS+L L L +LY+ +NN+ G IP + +L+QL
Sbjct: 67 PIPSSLANLPYLNFLYIGG-----------------------INNLVGPIPPAIAKLTQL 103
Query: 292 LYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSG 351
YL I+ +SG IP ++ + +L LD S N LSG +PP I L IT N +SG
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 352 SIPPEIGLMK--LEYLDLSHNKLNGTIPPFLYH---RFPLDLSYNDLEGE 396
+IP G + +S N+L G IPP + F +DLS N LEG+
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSRNMLEGD 212
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 47/223 (21%)
Query: 107 NYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLC 166
N L G IP + L++L YL + N++G+IP L ++ L L+ N L+G +P S+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 167 QLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGG 226
L L+ + N + G IP + G K ++ +
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFS-----------------------KLFTSMTISR 183
Query: 227 NKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKV---------------- 270
N+L G IP T L NL ++ L N L G G+ K+
Sbjct: 184 NRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGL 242
Query: 271 -------DMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIP 306
D+ N I GT+P LT+L L L++S N L G+IP
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ +YM+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+K KVVA+K + E Q E VLS+ + K YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS L E LD T I++ + L YLH +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KK 145
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ E +ADFG A L R GT ++APE+ K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLI------DVLDSRLSPPVDRMVMQ 739
D++S G+ A+E+ G P K++ + L+ S P+ V
Sbjct: 206 DIWSLGITAIELARGEPP-------HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE- 257
Query: 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778
ACL+ +P FRPT +E L K L N
Sbjct: 258 ----------ACLNKEPSFRPT----AKELLKHKFILRN 282
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ +YM+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG R+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ +YM+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVY--KAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 94
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ +YM+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 151
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 152 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 261
Query: 734 D 734
D
Sbjct: 262 D 262
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+K KVVA+K + E Q E VLS+ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS L E LD T I++ + L YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KK 125
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ E +ADFG A L R GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLI------DVLDSRLSPPVDRMVMQ 739
D++S G+ A+E+ G P K++ + L+ S P+ V
Sbjct: 186 DIWSLGITAIELARGEPP-------HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE- 237
Query: 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778
ACL+ +P FRPT +E L K L N
Sbjct: 238 ----------ACLNKEPSFRPT----AKELLKHKFILRN 262
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+K KVVA+K + E Q E VLS+ + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS L E LD T I++ + L YLH +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KK 140
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ E +ADFG A L R GT ++APE+ K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLI------DVLDSRLSPPVDRMVMQ 739
D++S G+ A+E+ G P K++ + L+ S P+ V
Sbjct: 201 DIWSLGITAIELARGEPP-------HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE- 252
Query: 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778
ACL+ +P FRPT +E L K L N
Sbjct: 253 ----------ACLNKEPSFRPT----AKELLKHKFILRN 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+K KVVA+K + E Q E VLS+ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS L E LD T I++ + L YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KK 125
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ E +ADFG A L R GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLI------DVLDSRLSPPVDRMVMQ 739
D++S G+ A+E+ G P K++ + L+ S P+ V
Sbjct: 186 DIWSLGITAIELARGEPP-------HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE- 237
Query: 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778
ACL+ +P FRPT +E L K L N
Sbjct: 238 ----------ACLNKEPSFRPT----AKELLKHKFILRN 262
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVY--KAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 77
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ +YM+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 134
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 135 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 244
Query: 734 D 734
D
Sbjct: 245 D 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 106
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ +YM+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 163
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 164 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 273
Query: 734 D 734
D
Sbjct: 274 D 274
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVY--KAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 104
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ +YM+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 161
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 162 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 271
Query: 734 D 734
D
Sbjct: 272 D 272
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 106
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ +YM+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 163
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 164 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 273
Query: 734 D 734
D
Sbjct: 274 D 274
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVYKAQL--PNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I+ IG G +G V +L P + VA+K L T++ F +EA ++ + H
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+ L G K + +I +YM+ GSL FLR ND V+ V +++ + + + YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 126
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
S VHRD+++ NIL+NS L V+DFG +R+L+ D G + APE
Sbjct: 127 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIKAIEEGYRLPPPM 236
Query: 734 D 734
D
Sbjct: 237 D 237
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 507 IGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G +G K G+V+ +K+L R + EET +F E V+ + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQ--RTFLKEVKVMRCLEHPNVLKFIG 74
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRN-DYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
K + I +Y+K G+L +++ D + W+ RV+ K +A+ ++YLH +
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQ---YPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLL--------------DSDSSNRTIVAGTYGY 670
I+HRD++S+N L+ VADFG ARL+ D R V G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL 698
+APE+ EK DV+SFG+V E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVYKAQL--PNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I+ IG G +G V +L P + VA+K L T++ F +EA ++ + H
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHP 75
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+ L G K + +I +YM+ GSL FLR ND V+ V +++ + + + YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL 132
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
S VHRD+++ NIL+NS L V+DFG +R+L+ D G + APE
Sbjct: 133 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIKAIEEGYRLPPPM 242
Query: 734 D 734
D
Sbjct: 243 D 243
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L T SF EA ++ K+ H +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG----TMSPESFLEEAQIMKKLKHDKLVQLYA- 71
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ ++++ +YM +GSL FL+ D E L V++ VA ++Y+ + +
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIER---MNYI 127
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ S NIL+ + L +ADFG ARL+ D++ + R + APE A T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 686 DVYSFGVVALE-VLMGRHP 703
DV+SFG++ E V GR P
Sbjct: 188 DVWSFGILLTELVTKGRVP 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 33/262 (12%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETE 537
FED + +F I +G G +G V + +LP+ K VA+K L TE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI++L G K + ++ + M+ GSL FLR +D +
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ +A+ + YL VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 146 VI---QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXX 712
D G + +PE T DV+S+G+V EV+ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YW 252
Query: 713 XXXDQKIMLIDVLDSRLSPPVD 734
+Q ++ RL PP+D
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMD 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554
+ E FD+ +G G YGSVYKA G++VA+K++ E++ E ++ +
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESD----LQEIIKEISIMQQ 80
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
++VK YG ++++ +Y GS+ +R + + D I++ L
Sbjct: 81 CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI--ATILQSTLKGL 138
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
YLH +HRDI + NILLN++ A +ADFG A L + R V GT ++APE
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 675 LAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ A+E+ G+ P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+K +VVA+K + E E+ Q E VLS+ + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSSYVTKYYG 88
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS LR A D ++K + L YLH +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KK 141
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ + + +ADFG A L R GT ++APE+ K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745
D++S G+ A+E+ G P D M + L + +PP +V
Sbjct: 202 DIWSLGITAIELAKGEPPN----------SDMHPMRVLFLIPKNNPPT--LVGDFTKSFK 249
Query: 746 TVALACLHSKPKFRPTMQRVCQEFLTCK 773
ACL+ P FRPT + + + K
Sbjct: 250 EFIDACLNKDPSFRPTAKELLKHKFIVK 277
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSVY--KAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 77
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ + M+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 134
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 135 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 244
Query: 734 D 734
D
Sbjct: 245 D 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 23/267 (8%)
Query: 507 IGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VYK + K VVA+K + E E+ Q E VLS+ I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPYITRYFG 84
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L +++I +Y+ GS L+ L+ T I++ + L YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSERK--- 137
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI + N+LL+ + + +ADFG A L R GT ++APE+ K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745
D++S G+ A+E+ G P D M + L + SPP + Q
Sbjct: 198 DIWSLGITAIELAKGEPPN----------SDLHPMRVLFLIPKNSPPT--LEGQHSKPFK 245
Query: 746 TVALACLHSKPKFRPTMQRVCQ-EFLT 771
ACL+ P+FRPT + + + +F+T
Sbjct: 246 EFVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 24/241 (9%)
Query: 503 IKYCIGTGGYGSV--YKAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I +G G +G V + +LP+ K VA+K L TE+ F EA ++ + H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 106
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
NI++L G K + ++ + M+ GSL FLR +D + V+ V +++ +A+ + YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL 163
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+L+ D G + +PE
Sbjct: 164 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T DV+S+G+V EV+ G P +Q ++ RL PP+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEGYRLPPPM 273
Query: 734 D 734
D
Sbjct: 274 D 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 26/231 (11%)
Query: 491 FEDIIKATEDF---------DIKYCIGTGGYGSVY--KAQLPNGKV--VALKKLHRAETE 537
+ED +A +F I+ IG G +G V + +LP + VA+K L TE
Sbjct: 5 YEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE 64
Query: 538 ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAV 596
+ F EA ++ + H NI+ L G K + ++ +YM+ GSL FL+ ND +
Sbjct: 65 KQR--RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
V+ V +++ ++ + YL VHRD+++ NIL+NS L V+DFG +R+L+
Sbjct: 123 VI---QLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 657 DSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
D G + APE T DV+S+G+V EV+ G P
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ KI H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKIRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 70
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 125
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWT 180
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 181 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 230
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 231 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 70
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 125
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWT 180
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 181 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 230
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 231 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 129
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWT 184
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 185 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 234
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 235 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 71
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 126
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWT 181
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 182 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 231
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 232 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+++ NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 67
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWT 177
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 178 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDPSQVYELLEK-DY 227
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 228 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 129
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 184
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 185 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 234
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISI 785
R+ P V + AC P RP+ + Q F T F+E SI
Sbjct: 235 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFETM-------FQESSI 280
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 129
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 184
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 185 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 234
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISI 785
R+ P V + AC P RP+ + Q F T F+E SI
Sbjct: 235 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFETM-------FQESSI 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 322
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 323 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 380
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 381 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 437
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDS-----RL 729
T K DV+SFG++ E+ GR +PG ++ +VLD R+
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPG--------------MVNREVLDQVERGYRM 483
Query: 730 S-PPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTCKIALVNPFEEI 783
PP + D++ C +P+ RPT +Q +++ T P E +
Sbjct: 484 PCPPECPESLHDLM------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGENL 535
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 71
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 126
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 181
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 182 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 231
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 232 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 129
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 184
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 185 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 234
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 235 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 473 PTKSGDVFSIWNYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGK--VVALKK 530
P ++G F+ RI E II + + ++ C G + ++P + VA+K
Sbjct: 35 PGRAGRSFTREIEASRIHIEKIIGSGDSGEV--CYG--------RLRVPGQRDVPVAIKA 84
Query: 531 LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR 590
L TE F +EA ++ + H NI++L G + ++ +YM+ GSL FLR
Sbjct: 85 LKAGYTERQR--RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 591 -NDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649
+D + ++ V +++ V + YL VHRD+++ N+L++S L V+DFG
Sbjct: 143 THDGQFTIMQL---VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 650 TARLLDSDSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
+R+L+ D G + APE + DV+SFGVV EVL G P
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 129
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 184
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 185 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 234
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 235 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 82
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 137
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 138 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 192
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 193 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 242
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 243 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 281
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 62
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 63 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 120
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 121 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 177
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 66
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 67 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 125 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 181
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E + F EA V+ K++H +V+LYG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE----DDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L++++M+ G L +LR + + + + C ++YL C ++
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEAC---VI 145
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYE 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 64
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 122
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 123 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 179
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 128
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 129 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 183
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 184 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 233
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 234 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 71
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 126
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 181
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 182 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 231
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 232 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ N VA+K L T +F EA+++ + H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
++ +++I +YM +GSL FL++D VL + ++ +A ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERK---NYI 132
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + N+L++ L +ADFG AR++ D++ + R + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ G+ P
Sbjct: 193 DVWSFGILLYEIVTYGKIP 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 67
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF--TAHAGAKFPIKWT 177
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 178 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDPSQVYELLEK-DY 227
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 228 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E F EA V+ K++H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L++++M+ G L +LR + + + + C ++YL C ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEAC---VI 125
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 124
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 179
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 180 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 229
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 230 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 276
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 331
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HR++++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 332 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWT 386
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 387 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 436
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISI 785
R+ P V + AC P RP+ + Q F T F+E SI
Sbjct: 437 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFETM-------FQESSI 482
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E F EA V+ K++H +V+LYG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 68
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L++++M+ G L +LR + + + + C ++YL C ++
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEAC---VI 123
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E F EA V+ K++H +V+LYG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 73
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L++++M+ G L +LR + + + + C ++YL C ++
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEAC---VI 128
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYE 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 70
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 273
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 328
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HR++++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 329 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 383
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 384 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 433
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISI 785
R+ P V + AC P RP+ + Q F T F+E SI
Sbjct: 434 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFETM-------FQESSI 479
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+++ Y IGTG YG K + +GK++ K+L E +E ++L ++
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELK 63
Query: 557 HRNIVKLYGFCLHKK--CMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
H NIV+ Y + + ++++ +Y + G L + + E LD + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 614 LSYLHH--DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L H D +++HRD+ N+ L+ K + DFG AR+L+ D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
+PE M EK D++S G + E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 473 PTKSGDVFSIWNYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGK--VVALKK 530
P ++G F+ RI E II + + ++ C G + ++P + VA+K
Sbjct: 35 PGRAGRSFTREIEASRIHIEKIIGSGDSGEV--CYG--------RLRVPGQRDVPVAIKA 84
Query: 531 LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR 590
L TE F +EA ++ + H NI++L G + ++ +YM+ GSL FLR
Sbjct: 85 LKAGYTERQR--RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 591 -NDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649
+D + ++ V +++ V + YL VHRD+++ N+L++S L V+DFG
Sbjct: 143 THDGQFTIMQL---VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 650 TARLLDSDSSNRTIVAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
+R+L+ D G + APE + DV+SFGVV EVL G P
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 70
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+++ Y IGTG YG K + +GK++ K+L E +E ++L ++
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELK 63
Query: 557 HRNIVKLYGFCLHKK--CMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
H NIV+ Y + + ++++ +Y + G L + + E LD + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 614 LSYLHH--DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L H D +++HRD+ N+ L+ K + DFG AR+L+ D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
+PE M EK D++S G + E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G +G VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 67
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAM 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWT 177
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 178 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDPSQVYELLEK-DY 227
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771
R+ P V + AC P RP+ + Q F T
Sbjct: 228 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 239
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDS-----RL 729
T K DV+SFG++ E+ GR +PG ++ +VLD R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPG--------------MVNREVLDQVERGYRM 400
Query: 730 S-PPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTCKIALVNPFEEI 783
PP + D++ C +P+ RPT +Q +++ T P E +
Sbjct: 401 PCPPECPESLHDLM------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGENL 452
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 63
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ + ++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 64 KLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 122 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 178
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 239
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDS-----RL 729
T K DV+SFG++ E+ GR +PG ++ +VLD R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPG--------------MVNREVLDQVERGYRM 400
Query: 730 S-PPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTCKIALVNPFEEI 783
PP + D++ C +P+ RPT +Q +++ T P E +
Sbjct: 401 PCPPECPESLHDLM------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 452
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY+ + VA+K L E+T F EA V+ +I H
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 315
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + ++I ++M G+L +L R + AVVL + + +++A+
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAM 370
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HR++++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 371 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 425
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
APE LAY K DV++FGV+ E+ M +PG Q L++ D
Sbjct: 426 APESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPG--------IDLSQVYELLEK-DY 475
Query: 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISI 785
R+ P V + AC P RP+ + Q F T F+E SI
Sbjct: 476 RMERPEGCPEK-----VYELMRACWQWNPSDRPSFAEIHQAFETM-------FQESSI 521
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 239
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDS-----RL 729
T K DV+SFG++ E+ GR +PG ++ +VLD R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPG--------------MVNREVLDQVERGYRM 400
Query: 730 S-PPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTCKIALVNPFEEI 783
PP + D++ C +P+ RPT +Q +++ T P E +
Sbjct: 401 PCPPECPESLHDLM------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGENL 452
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E F EA V+ K++H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L++++M+ G L +LR + + + + C ++YL S++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEE---ASVI 125
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +G L FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 503 IKYCIGTGGYGSVY--KAQLPNGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
I+ IG G +G V + +LP + VA+K L TE+ F EA ++ + H
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR--RDFLCEASIMGQFDHP 104
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYL 617
N+V L G K + ++ ++M+ G+L FLR +D + V+ V +++ +A + YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL 161
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG---TYGYIAPE 674
VHRD+++ NIL+NS L V+DFG +R+++ D G + APE
Sbjct: 162 AD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 675 LAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
T DV+S+G+V EV+ G P
Sbjct: 219 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G V+ N VA+K + E F EA V+ K++H +V+LYG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 71
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
CL + + L+ ++M+ G L +LR + + + + C ++YL C ++
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEAC---VI 126
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L+ V+DFG R +LD ++ T + +PE+ + K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 686 DVYSFGVVALEVL-MGRHPGE 705
DV+SFGV+ EV G+ P E
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYE 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L T +F EA V+ K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHE 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +G L FL+ + L V++ +A+ ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG ARL+ D++ + R + APE A
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ--LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
E + I +G GG +VY A+ + N KV A+K + E+ F+ E H S+++
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H+NIV + C +L+ +Y++ +L ++ + + + +D +N + + + +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTA--INFTNQILDGIKH 126
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPEL 675
H IVHRDI NIL++S + DFG A+ L S +T V GT Y +PE
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
A E D+YS G+V E+L+G P
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E F EA V+ ++H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 139
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 249
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 250 --VYTIMYSCWHEKADERPTFK 269
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 34/282 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+D++++ IG+G V A P + VA+K+++ + + T + E +S+ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHH 72
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-----DYEAVVLDWTMRVNIIKCVAN 612
NIV Y + K ++L+ K + GS+ +++ ++++ VLD + I++ V
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD-----SSNRTIVAGT 667
L YLH + +HRD+ + NILL +ADFG + L + + R GT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 668 YGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLD 726
++APE+ + + K D++SFG+ A+E+ G P K++++ + +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKVLMLTLQN 242
Query: 727 SRLSPPVDRMVMQDIVLVTTVALA-------CLHSKPKFRPT 761
PP +QD ++ + CL P+ RPT
Sbjct: 243 ---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ VA+K L F EA V+ K+ H
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHE 240
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+V+LY + ++ ++++ +YM +GSL FL+ + L V++ +A+ ++Y+
Sbjct: 241 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE 298
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ VHRD+ + NIL+ L VADFG RL+ D++ + R + APE A
Sbjct: 299 R---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAAL 355
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ E+ GR P
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 27/217 (12%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D +K+ +G G YG VY + VA+K L E+T F EA V+ +I H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 88
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL----RNDYEAVVLDWTMRVNIIKCVANAL 614
N+V+L G C + +++ +YM G+L +L R + AVVL + + +++A+
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAM 143
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY---GYI 671
YL + +HRD+++ N L+ VADFG +RL+ D+ T AG +
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWT 198
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVL---MGRHPG 704
APE LAY + K DV++FGV+ E+ M +PG
Sbjct: 199 APESLAYN-TFSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+++ Y IGTG YG K + +GK++ K+L E +E ++L ++
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELK 63
Query: 557 HRNIVKLYGFCLHKK--CMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
H NIV+ Y + + ++++ +Y + G L + + E LD + ++ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 614 LSYLHH--DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L H D +++HRD+ N+ L+ K + DFG AR+L+ D GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
+PE M EK D++S G + E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 34/282 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+D++++ IG+G V A P + VA+K+++ + + T + E +S+ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHH 67
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-----DYEAVVLDWTMRVNIIKCVAN 612
NIV Y + K ++L+ K + GS+ +++ ++++ VLD + I++ V
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD-----SSNRTIVAGT 667
L YLH + +HRD+ + NILL +ADFG + L + + R GT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 668 YGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLD 726
++APE+ + + K D++SFG+ A+E+ G P K++++ + +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKVLMLTLQN 237
Query: 727 SRLSPPVDRMVMQDIVLVTTVALA-------CLHSKPKFRPT 761
PP +QD ++ + CL P+ RPT
Sbjct: 238 ---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E F EA V+ ++H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 139
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 249
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 250 --VYTIMYSCWHEKADERPTFK 269
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ N VA+K L T +F EA+++ + H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
++ +++I ++M +GSL FL++D VL + ++ +A ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERK---NYI 131
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + N+L++ L +ADFG AR++ D++ + R + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 686 DVYSFGVVALEVLM-GRHP 703
+V+SFG++ E++ G+ P
Sbjct: 192 NVWSFGILLYEIVTYGKIP 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E + F EA V+ ++H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 130
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 240
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 241 --VYTIMYSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E + F EA V+ ++H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 123
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 233
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 234 --VYTIMYSCWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E + F EA V+ ++H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 124
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 234
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 235 --VYTIMYSCWHEKADERPTFK 254
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G+G +G V + VA+K + E FF EA + K++H +VK YG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ----EAQTMMKLSHPKLVKFYGV 71
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
C + ++++ +Y+ G L +LR+ + L+ + + + V +++L +
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFI 126
Query: 627 HRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+++ N L++ L V+DFG R +LD + + APE+ + + K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 686 DVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVLV 744
DV++FG++ EV +G+ P + + +++L RL P + D +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD-------LYTNSEVVLKVSQGHRLYRP---HLASDTIY- 235
Query: 745 TTVALACLHSKPKFRPTMQRV 765
+ +C H P+ RPT Q++
Sbjct: 236 -QIMYSCWHELPEKRPTFQQL 255
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E + F EA V+ ++H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 124
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 234
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 235 --VYTIMYSCWHEKADERPTFK 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GTG +G V + VA+K + E + F EA V+ ++H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 567 CLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
C ++ +F+I +YM G L +L R+ ++ L + + K V A+ YL
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES---K 119
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
+HRD+++ N L+N + V+DFG +R +LD + ++ + PE+ +
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 683 EKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDI 741
K D+++FGV+ E+ +G+ P E + + RL P + +
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRP--HLASEK- 229
Query: 742 VLVTTVALACLHSKPKFRPTMQ 763
V T+ +C H K RPT +
Sbjct: 230 --VYTIMYSCWHEKADERPTFK 249
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 507 IGTGGYGSVYKAQLPNG------KVVALKKLHRAETEETT-----FFNSFQNEAHVLSKI 555
+G+G YG V + NG KV+ + + + F NE +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NI+KL+ KK +L+ ++ + G LF + N ++ D NI+K + + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGIC 160
Query: 616 YLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
YLH +IVHRDI NILL NS L + DFG + D R + Y YIA
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIA 216
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ EKCDV+S GV+ +L G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
I + EDF + +G G + VY+A+ + G VA+K + + + QNE +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
++ H +I++LY + ++L+ + G + +L+N + + + + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIIT 123
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
+ YLH I+HRD++ +N+LL + +ADFG A L + GT YI+
Sbjct: 124 GMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYIS 180
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+A + DV+S G + +L+GR P
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 84
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 201 DVWSFGILLTEIVTHGRIP 219
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ A VA+K + + +F EA+V+ + H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 243
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+VKL+ + K+ +++I ++M +GSL FL++D E ++ +A ++++
Sbjct: 244 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ +HRD+ + NIL+++ L +ADFG AR++ D++ + R + APE
Sbjct: 302 QR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVD 734
T K DV+SFG++ +E++ GR +PG +I L+ P
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALERGYRMPRP 407
Query: 735 RMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTC 772
+++ + + C ++P+ RPT +Q V +F T
Sbjct: 408 ENCPEELY---NIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 81
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 83
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 139
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 200 DVWSFGILLTEIVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 77
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 133
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 194 DVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 75
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 76
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 132
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 193 DVWSFGILLTEIVTHGRIP 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 500 DFDIKYCIGTGGYGSVYKAQ----LP--NGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
D +K+ +G G +G V+ A+ LP + +VA+K L A FQ EA +L+
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLT 98
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN------------DYEAVVLDWT 601
+ H++IV+ +G C + + ++++YM+ G L FLR+ D L
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 602 MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661
+ + VA + YL VHRD+++ N L+ L + DFG +R D S++
Sbjct: 159 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDY 213
Query: 662 TIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
V G ++ PE T + DV+SFGVV E+ G+ P
Sbjct: 214 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG+G +G+VYK + V + K+ E+ F +F+NE VL K H NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ---FQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ K + ++ ++ + SL+ L + ++I + A + YLH +I+
Sbjct: 101 -MTKDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLH---AKNII 154
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV--AGTYGYIAPELAYTM---VV 681
HRD+ SNNI L+ L + DFG A + S ++ + G+ ++APE+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 682 TEKCDVYSFGVVALEVLMGRHP 703
+ + DVYS+G+V E++ G P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 75
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 71
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 122
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 127
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 11/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ A VA+K + + +F EA+V+ + H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 70
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+VKL+ + K+ +++I ++M +GSL FL++D E ++ +A ++++
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAY 677
+ +HRD+ + NIL+++ L +ADFG AR++ D++ + R + APE
Sbjct: 129 QR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 678 TMVVTEKCDVYSFGVVALEVLM-GRHP 703
T K DV+SFG++ +E++ GR P
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 127
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE +K +G+G +G+VYK +P G+ V A+K L+ ET F +E
Sbjct: 34 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDE 90
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A +++ + H ++V+L G CL + L+ + M G L ++ + + +L+W +++
Sbjct: 91 ALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI 149
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A + YL +VHRD+++ N+L+ S + DFG ARLL+ D
Sbjct: 150 ------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 71
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 122
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFG--TARLLDSDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG T + S S ++G+ ++APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 73
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 74 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 124
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 99
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 150
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 91
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 92 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 142
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFG--TARLLDSDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG T + S S ++G+ ++APE+
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 98
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 99 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 149
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 87
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR--VNIIKCVANALSYLHHDCMP 623
+ K + ++ ++ + SL+ L A + M+ ++I + A + YLH
Sbjct: 88 YST-KPQLAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTARGMDYLH---AK 139
Query: 624 SIVHRDISSNNILLNSKLEAFVADFG--TARLLDSDSSNRTIVAGTYGYIAPE---LAYT 678
SI+HRD+ SNNI L+ + DFG T + S S ++G+ ++APE + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVM 738
+ + DVY+FG+V E++ G+ P DQ I ++ LSP + ++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP-----YSNINNRDQIIEMVG--RGSLSPDLSKVRS 252
Query: 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768
+ + CL K RP+ R+ E
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRILAE 282
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ----LP--NGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
D +K+ +G G +G V+ A+ LP + +VA+K L A FQ EA +L
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELL 68
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN------------DYEAVVLDW 600
+ + H++IV+ +G C + + ++++YM+ G L FLR+ D L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
+ + VA + YL VHRD+++ N L+ L + DFG +R D S++
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTD 183
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
V G ++ PE T + DV+SFGVV E+ G+ P
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 99
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ K + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 150
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFG--TARLLDSDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG T + S S ++G+ ++APE+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ----LP--NGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
D +K+ +G G +G V+ A+ LP + +VA+K L A FQ EA +L
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELL 74
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN------------DYEAVVLDW 600
+ + H++IV+ +G C + + ++++YM+ G L FLR+ D L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
+ + VA + YL VHRD+++ N L+ L + DFG +R D S++
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTD 189
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
V G ++ PE T + DV+SFGVV E+ G+ P
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 81
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 75
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR--VNIIKCVANALSYLHHDCMP 623
+ K + ++ ++ + SL+ L A + M+ ++I + A + YLH
Sbjct: 76 YST-KPQLAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTARGMDYLH---AK 127
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPE---LAYT 678
SI+HRD+ SNNI L+ + DFG A + S S ++G+ ++APE + +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVM 738
+ + DVY+FG+V E++ G+ P DQ I ++ LSP + ++
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLP-----YSNINNRDQIIEMVG--RGSLSPDLSKVRS 240
Query: 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768
+ + CL K RP+ R+ E
Sbjct: 241 NCPKRMKRLMAECLKKKRDERPSFPRILAE 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 85
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 86 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 141
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 202 DVWSFGILLTEIVTHGRIP 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 75
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554
K EDF +G G + +V A +L + A+K L + + E V+S+
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H VKLY + ++ Y K G L ++R D T + +AL
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSAL 123
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIA 672
YLH I+HRD+ NILLN + + DFGTA++L +S + GT Y++
Sbjct: 124 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSP 731
PEL + D+++ G + +++ G P QKI+ ++ + P
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFP 237
Query: 732 PVDRMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 238 KARDLVEKLLVLDATKRLGC 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 80
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 136
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 197 DVWSFGILLTEIVTHGRIP 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 558 RNIVKLYGFCLHK-KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
VKLY FC + ++ Y K G L ++R D T + +AL Y
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEY 152
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPE 674
LH I+HRD+ NILLN + + DFGTA++L +S + GT Y++PE
Sbjct: 153 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 675 LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPV 733
L + D+++ G + +++ G P QKI+ ++ + P
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKA 266
Query: 734 DRMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 267 RDLVEKLLVLDATKRLGC 284
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554
K EDF +G G + +V A +L + A+K L + + E V+S+
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H VKLY + ++ Y K G L ++R D T + +AL
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSAL 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIA 672
YLH I+HRD+ NILLN + + DFGTA++L +S + GT Y++
Sbjct: 123 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSP 731
PEL + D+++ G + +++ G P QKI+ ++ + P
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFP 236
Query: 732 PVDRMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 237 KARDLVEKLLVLDATKRLGC 256
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 70
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 71 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 126
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 187 DVWSFGILLTEIVTHGRIP 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554
K EDF +G G + +V A +L + A+K L + + E V+S+
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H VKLY + ++ Y K G L ++R D T + +AL
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSAL 120
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIA 672
YLH I+HRD+ NILLN + + DFGTA++L +S + GT Y++
Sbjct: 121 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSP 731
PEL + D+++ G + +++ G P QKI+ ++ + P
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFP 234
Query: 732 PVDRMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 235 KARDLVEKLLVLDATKRLGC 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554
K EDF +G G + +V A +L + A+K L + + E V+S+
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H VKLY + ++ Y K G L ++R D T + +AL
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSAL 121
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIA 672
YLH I+HRD+ NILLN + + DFGTA++L +S + GT Y++
Sbjct: 122 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSP 731
PEL + D+++ G + +++ G P QKI+ ++ + P
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFP 235
Query: 732 PVDRMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 236 KARDLVEKLLVLDATKRLGC 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE +K +G+G +G+VYK +P G+ V A+K L+ ET F +E
Sbjct: 11 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A +++ + H ++V+L G CL + L+ + M G L ++ + + +L+W +++
Sbjct: 68 ALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A + YL +VHRD+++ N+L+ S + DFG ARLL+ D
Sbjct: 127 ------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 24/223 (10%)
Query: 487 GRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTF 541
G +A I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + +
Sbjct: 1 GAMALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN- 58
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----V 597
+EA+V++ + + ++ +L G CL + LI + M G L ++R + + +
Sbjct: 59 -KEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYL 116
Query: 598 LDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657
L+W +++ A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 117 LNWCVQI------AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 167
Query: 658 SSNRTIVAGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 75
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HRD+ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF I +GTG +G V+ + NG+ A+K L + +E +LS + H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE---AVVLDWTMRVNIIKCVANAL 614
I++++G + +F+I Y++ G LF LR V + V C+ AL
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV----CL--AL 119
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
YLH I++RD+ NILL+ + DFG A+ + + + GT YIAPE
Sbjct: 120 EYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT---YXLCGTPDYIAPE 173
Query: 675 LAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ T + D +SFG++ E+L G P
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 71
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++ ++ + SL+ L +E + L ++I + A + YLH
Sbjct: 72 YSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH---A 122
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLD--SDSSNRTIVAGTYGYIAPELAYTM- 679
SI+HRD+ SNNI L+ L + DFG A + S S ++G+ ++APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 680 --VVTEKCDVYSFGVVALEVLMGRHP 703
+ + DVY+FG+V E++ G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 149
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 150 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 263
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 264 DLVEKLLVLDATKRLGC 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
++ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 262
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 263 DLVEKLLVLDATKRLGC 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 262
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 263 DLVEKLLVLDATKRLGC 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 147 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 260
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 261 DLVEKLLVLDATKRLGC 277
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 262
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 263 DLVEKLLVLDATKRLGC 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 262
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 263 DLVEKLLVLDATKRLGC 279
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 147 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 260
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 261 DLVEKLLVLDATKRLGC 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 147 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 260
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 261 DLVEKLLVLDATKRLGC 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 149
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 150 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 263
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 264 DLVEKLLVLDATKRLGC 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 130
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 131 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 244
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 245 DLVEKLLVLDATKRLGC 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G +G+VYK + VA+K L+ A T + +F+NE VL K H NI+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMG 87
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR--VNIIKCVANALSYLHHDCMP 623
+ + + ++ ++ + SL+ L A + M+ ++I + A + YLH
Sbjct: 88 YSTAPQ-LAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTARGMDYLH---AK 139
Query: 624 SIVHRDISSNNILLNSKLEAFVADFG--TARLLDSDSSNRTIVAGTYGYIAPE---LAYT 678
SI+HRD+ SNNI L+ + DFG T + S S ++G+ ++APE + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVM 738
+ + DVY+FG+V E++ G+ P DQ I ++ LSP + ++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP-----YSNINNRDQIIEMVG--RGSLSPDLSKVRS 252
Query: 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768
+ + CL K RP+ R+ E
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRILAE 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 145
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 146 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 259
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 260 DLVEKLLVLDATKRLGC 276
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G +G V+ VA+K L + ++F EA+++ ++ H+ +V+LY
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLYA- 71
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+ ++ +++I +YM+ GSL FL+ + L +++ +A ++++ + +
Sbjct: 72 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYI 127
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
HR++ + NIL++ L +ADFG ARL+ D++ + R + APE T K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 686 DVYSFGVVALEVLM-GRHP 703
DV+SFG++ E++ GR P
Sbjct: 188 DVWSFGILLTEIVTHGRIP 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 69
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 129 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 68
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 69 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 128 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 69
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 129 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 71
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 72 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 131 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 151
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 152 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPAAFFPKAR 265
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 266 DLVEKLLVLDATKRLGC 282
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 31/208 (14%)
Query: 510 GGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLS--KIAHRNIVKLYGFC 567
G +G V+KAQL N + VA+K + + S+QNE V S + H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ------SWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 568 LHKKC----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC-- 621
++LI + ++GSL FL+ A V+ W +I + +A L+YLH D
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 622 -----MPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPE 674
P+I HRDI S N+LL + L A +ADFG A ++ S + GT Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 675 LAYTMVVTE-----KCDVYSFGVVALEV 697
+ + + + D+Y+ G+V E+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 71
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 72 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 131 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 70
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 503 IKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+K +G G +G V+ A+ N +VA+K L A F EA +L+ +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR---KDFHREAELLTNLQ 73
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVV---------LDWTMRVNI 606
H +IVK YG C+ + ++++YMK G L FLR + +AV+ L + ++I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG 666
+ +A + YL VHRD+++ N L+ L + DFG +R D S++ V G
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGG 188
Query: 667 ----TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
++ PE T + DV+S GVV E+ G+ P
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 68
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 69 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 128 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 69
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 129 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 69
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 129 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 145
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 146 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 259
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 260 DLVEKLLVLDATKRLGC 276
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 18 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 74
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 75 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEAHVL 552
D +K +G G +G V+ A+ N +VA+K L + FQ EA +L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAELL 71
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDYEAVV------------LD 599
+ + H +IVK YG C + ++++YMK G L FLR + +A++ L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ ++I +A+ + YL VHRD+++ N L+ + L + DFG +R D S+
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYST 186
Query: 660 NRTIVAG----TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHP 703
+ V G ++ PE T + DV+SFGV+ E+ G+ P
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 499 EDFDIKYCIGTGGYGS-VYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + + V +L + A+K L + + E V+S++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 147 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDV-LDSRLSPPVD 734
+ D+++ G + +++ G P QKI+ ++ + P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF---QKIIKLEYDFPEKFFPKAR 260
Query: 735 RMVMQDIVLVTTVALAC 751
+V + +VL T L C
Sbjct: 261 DLVEKLLVLDATKRLGC 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G YG VYKAQ G+ ALKK+ R E E+ ++ E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 567 CLHKKCMFLIYKYMKRG--SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
KK + L+++++ + L E+V T + +++ + N ++Y H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLL-NGIAYCHDR---R 120
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTE 683
++HRD+ N+L+N + E +ADFG AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 684 KCDVYSFGVVALEVLMG 700
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 70
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 69
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 129 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G YG VYKAQ G+ ALKK+ R E E+ ++ E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 567 CLHKKCMFLIYKYMKRG--SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
KK + L+++++ + L E+V T + +++ + N ++Y H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLL-NGIAYCHDR---R 120
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTE 683
++HRD+ N+L+N + E +ADFG AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 684 KCDVYSFGVVALEVLMG 700
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 70
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 17 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 73
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 74 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 133 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 70
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 18 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 74
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 75 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 36 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 92
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 93 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 152 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ D+++ G + +++ G P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 21 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 77
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 78 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 137 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
ED + IG G +G V+ +L + +VA+K ET F EA +L + +H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NIV+L G C K+ ++++ + ++ G FLR E L + ++ A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-------Y 670
C +HRD+++ N L+ K ++DFG +R ++D + A + G +
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADG----VXAASGGLRQVPVKW 281
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
APE + + DV+SFG++ E +G P
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G YG VYKAQ G+ ALKK+ R E E+ ++ E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 567 CLHKKCMFLIYKYMKRG--SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
KK + L+++++ + L E+V T + +++ + N ++Y H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLL-NGIAYCHDR---R 120
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTE 683
++HRD+ N+L+N + E +ADFG AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 684 KCDVYSFGVVALEVLMG 700
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 501 FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-R 558
F++ +G G YG VYK + + G++ A+K + EE + E ++L K +H R
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 81
Query: 559 NIVKLYGFCLHK------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
NI YG + K ++L+ ++ GS+ ++N + L I + +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILR 140
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LS+LH ++HRDI N+LL E + DFG + LD R GT ++A
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 673 PELAY-----TMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ K D++S G+ A+E+ G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 5 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 61
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 62 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 121 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
ED + IG G +G V+ +L + +VA+K ET F EA +L + +H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NIV+L G C K+ ++++ + ++ G FLR E L + ++ A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-------Y 670
C +HRD+++ N L+ K ++DFG +R ++D + A + G +
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADG----VYAASGGLRQVPVKW 281
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
APE + + DV+SFG++ E +G P
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +G G + +V A +L + A+K L + + E V+S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
VKLY + ++ Y K G L ++R D T + +AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPEL 675
H I+HRD+ NILLN + + DFGTA++L +S + GT Y++PEL
Sbjct: 149 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ D+++ G + +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 487 GRIAFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEE 538
G +AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE 59
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAV 596
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E +
Sbjct: 60 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
D + + + YL +HRD+++ NIL+ ++ + DFG ++L
Sbjct: 118 --DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 657 DSSNRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
D + + APE + DV+SFGVV E+
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETT--FFNSFQNEAH 550
I+K TE +K +G+G +G+VYK +P+G+ V + + E T+ +EA+
Sbjct: 13 ILKETELRKVK-VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRVNI 606
V++ + + +L G CL L+ + M G L +R + + +L+W M++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-- 128
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG 666
A +SYL +VHRD+++ N+L+ S + DFG ARLLD D + G
Sbjct: 129 ----AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 667 TY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
++A E T + DV+S+GV E++
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G+G YG V + V K+ R + T+ + E VL + H NI+KLY F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
K+ +L+ + K G LF + + + +D + IIK V + ++YLH +IV
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHK---HNIV 158
Query: 627 HRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
HRD+ N+LL SK + + DFG + + ++ + + GT YIAPE+ E
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-GTAYYIAPEVLRKK-YDE 216
Query: 684 KCDVYSFGVVALEVLMGRHP 703
KCDV+S GV+ +L G P
Sbjct: 217 KCDVWSIGVILFILLAGYPP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 148
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G YG VYKA+ G++VALK++ R + E+ ++ E +L ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
++C+ L++++M++ N + + D +++ + + + H I+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH----RIL 141
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEKC 685
HRD+ N+L+NS +ADFG AR + T T Y AP+ L + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 686 DVYSFGVVALEVLMGR 701
D++S G + E++ G+
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+G G YG VYKA+ G++VALK++ R + E+ ++ E +L ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
++C+ L++++M++ N + + D +++ + + + H I+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH----RIL 141
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEKC 685
HRD+ N+L+NS +ADFG AR + T T Y AP+ L + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 686 DVYSFGVVALEVLMGR 701
D++S G + E++ G+
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G G+VY A + G+ VA+++++ + + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L ++++ +Y+ GSL + +D + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 167
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK +G+G +G+VYK +P G+ V A+ +L A + + +E
Sbjct: 45 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN--KEILDE 101
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 102 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 160
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 161 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 150
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSD---SSNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR +LD + N+T ++A E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G G+VY A + G+ VA+++++ + + NE V+ + + NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 85
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L ++++ +Y+ GSL + +D + + AL +LH + +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S G++A+E++ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 168
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G G+VY A + G+ VA+++++ + + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L ++++ +Y+ GSL + +D + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK + +G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 18 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 74
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 75 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G +G V G VA+K + T + +F EA V++++ H N+V+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 73
Query: 567 CLHKKC-MFLIYKYMKRGSLFCFLRNDYEAVVL-DWTMRVNIIKCVANALSYLHHDCMPS 624
+ +K ++++ +YM +GSL +LR+ +V+ D ++ ++ C A+ YL + +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC--EAMEYLEGN---N 128
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEK 684
VHRD+++ N+L++ A V+DFG L SS + + APE + K
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 685 CDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743
DV+SFG++ E+ GR P +K +D D PP VM++
Sbjct: 186 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG--CPPAVYEVMKN--- 240
Query: 744 VTTVALACLHSKPKFRPTMQRVCQEF 769
C H RP+ ++ ++
Sbjct: 241 -------CWHLDAAMRPSFLQLREQL 259
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 489 IAFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETT 540
+AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 1 MAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE-- 57
Query: 541 FFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E +
Sbjct: 58 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-- 115
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
D + + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 116 DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 172
Query: 659 SNRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 173 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 149
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 141
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK + +G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 18 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 74
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 75 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVV----ALKKLHRAETEETTFFNSFQNE 548
I+K TE IK + +G +G+VYK +P G+ V A+K+L A + + +E
Sbjct: 11 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 67
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRV 604
A+V++ + + ++ +L G CL + LI + M G L ++R + + +L+W +++
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 665 AGTY--GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
G ++A E + T + DV+S+GV E++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 147
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 146
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G G+VY A + G+ VA+++++ + + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
L ++++ +Y+ GSL + +D + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
+HRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 490 AFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTF 541
AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 29 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--H 85
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E + D
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--D 143
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 144 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 660 NRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 144
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 148
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 149
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + D + N+T ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 507 IGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G YG V K +L G A+K + ++ T+ + +E VL ++ H NI+KLY
Sbjct: 29 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 565 GFCLHKKCMFLIYKYMKRGSLF--CFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
F K+ +L+ + + G LF LR + V D + I+K V + +YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV--DAAV---IMKQVLSGTTYLHKH-- 140
Query: 623 PSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM 679
+IVHRD+ N+LL SK + DFG + + + + GT YIAPE+
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKK 198
Query: 680 VVTEKCDVYSFGVVALEVLMGRHP 703
EKCDV+S GV+ +L G P
Sbjct: 199 -YDEKCDVWSCGVILYILLCGYPP 221
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 490 AFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTF 541
AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 5 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--H 61
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E + D
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--D 119
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 120 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
Query: 660 NRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 177 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 490 AFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTF 541
AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 3 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--H 59
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E + D
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--D 117
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 118 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
Query: 660 NRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 175 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF+I IG G +G V +L N KV A+K L++ E + F+ E VL
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA--NALS 615
+ I L+ ++L+ Y G L L + +E + + R + + V +++
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL-SKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA-RLLDSDSSNRTIVAGTYGYIAPE 674
LH+ VHRDI +NIL++ +ADFG+ +L++ + ++ GT YI+PE
Sbjct: 193 QLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 675 LAYTMVVTE-----KCDVYSFGVVALEVLMGRHP 703
+ M + +CD +S GV E+L G P
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 507 IGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G YG V K +L G A+K + ++ T+ + +E VL ++ H NI+KLY
Sbjct: 12 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 565 GFCLHKKCMFLIYKYMKRGSLF--CFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
F K+ +L+ + + G LF LR + V D + I+K V + +YLH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV--DAAV---IMKQVLSGTTYLHK--- 122
Query: 623 PSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM 679
+IVHRD+ N+LL SK + DFG + + + + Y YIAPE+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY-YIAPEVLRKK 181
Query: 680 VVTEKCDVYSFGVVALEVLMGRHP 703
EKCDV+S GV+ +L G P
Sbjct: 182 -YDEKCDVWSCGVILYILLCGYPP 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALK--KLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A+ + G+ VA+K L + + E F NE ++ H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-----NEVVIMRDYQHFNVVEM 107
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
Y L + ++++ ++++ G+L + V L+ + + V AL+YLH
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ--- 160
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
++HRDI S++ILL ++DFG + D R + GT ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 24/220 (10%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALK-------KLHRAETEETTFFNSFQNEAH 550
+ +D K IG G V + G A+K +L + EE + + E H
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR--EATRRETH 151
Query: 551 VLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+L ++A H +I+ L MFL++ M++G LF +L E V L +I++
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRS 208
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
+ A+S+LH + +IVHRD+ NILL+ ++ ++DFG + L+ R + GT G
Sbjct: 209 LLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL-CGTPG 264
Query: 670 YIAPE-LAYTMVVT-----EKCDVYSFGVVALEVLMGRHP 703
Y+APE L +M T ++ D+++ GV+ +L G P
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 92
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 148
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 208 TESKFSVASDVWSFGVVLYELF 229
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 208
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 76 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 132
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 133 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 243
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 244 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 271
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 92
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 148
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 208 TESKFSVASDVWSFGVVLYELF 229
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 74
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 72
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 128
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 188 TESKFSVASDVWSFGVVLYELF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 77
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 133
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 193 TESKFSVASDVWSFGVVLYELF 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 74
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 73
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 129
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 189 TESKFSVASDVWSFGVVLYELF 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 41/281 (14%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIA-HRNIV 561
+G G +G V +A GK A+ K+ + T + + +E ++S + H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV-------LDWTMRVNIIKCVANAL 614
L G C H + +I +Y G L FLR EA + L+ ++ VA +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT----YGY 670
++L + +HRD+++ N+LL + A + DFG AR + +DS+ IV G +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKW 220
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
+APE + V T + DV+S+G++ E+ + +PG +L++
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---------------ILVNSKFY 265
Query: 728 RLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVC 766
+L +M + ++ AC +P RPT Q++C
Sbjct: 266 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 306
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 154
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 150
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 494 IIKATEDFDIKYC----IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNE 548
II + D KY IG G G+VY A + G+ VA+++++ + + NE
Sbjct: 12 IIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INE 68
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIK 608
V+ + + NIV L ++++ +Y+ GSL + +D + +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCR 124
Query: 609 CVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
AL +LH + ++HR+I S+NILL + DFG + + S R+ + GT
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 181
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
++APE+ K D++S G++A+E++ G P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 490 AFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTF 541
AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 1 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--H 57
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
F+ E +L + H NIVK G C ++ + LI +Y+ GSL +L+ E + D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--D 115
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 116 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 660 NRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 42/282 (14%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++ +G G +G V+ A VA+K + + +F EA+V+ + H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 237
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+VKL+ + K+ +++I ++M +GSL FL++D E ++ +A ++++
Sbjct: 238 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY--GYIAPELA 676
+ +HRD+ + NIL+++ L +ADFG AR V + + APE
Sbjct: 296 QR---NYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAI 341
Query: 677 YTMVVTEKCDVYSFGVVALEVLM-GR--HPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPV 733
T K DV+SFG++ +E++ GR +PG +I L+ P
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALERGYRMPR 390
Query: 734 DRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEFLTC 772
+++ + + C ++P+ RPT +Q V +F T
Sbjct: 391 PENCPEELY---NIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 149
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G +G V G VA+K + T + +F EA V++++ H N+V+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 67
Query: 567 CLHKKC-MFLIYKYMKRGSLFCFLRNDYEAVVL-DWTMRVNIIKCVANALSYLHHDCMPS 624
+ +K ++++ +YM +GSL +LR+ +V+ D ++ ++ C A+ YL + +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC--EAMEYLEGN---N 122
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEK 684
VHRD+++ N+L++ A V+DFG L SS + + APE + K
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 685 CDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743
DV+SFG++ E+ GR P +K +D D PP VM++
Sbjct: 180 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG--CPPAVYEVMKN--- 234
Query: 744 VTTVALACLHSKPKFRPTMQRVCQEF 769
C H RP+ ++ ++
Sbjct: 235 -------CWHLDAAMRPSFLQLREQL 253
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 149
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 122
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 233
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 234 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 261
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 507 IGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY L +GK + A+K L+R + + F E ++ +H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 563 LYGFCLHKK-CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHD 620
L G CL + ++ YMK G L F+RN+ + V D + VA + +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 147
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL---DSDS-SNRTIVAGTYGYIAPELA 676
VHRD+++ N +L+ K VADFG AR + + DS N+T ++A E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
T T K DV+SFGV+ E++ P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 76 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 132
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 133 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 243
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 244 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 271
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNI 110
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 280
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 281 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 317
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + +GK+VA+KK L + + E F NE ++ H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 93
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 146
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + +GK+VA+KK L + + E F NE ++ H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 91
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 144
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + +GK+VA+KK L + + E F NE ++ H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 136
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 189
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 190 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G +G V G VA+K + T + +F EA V++++ H N+V+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 82
Query: 567 CLHKKC-MFLIYKYMKRGSLFCFLRNDYEAVVL-DWTMRVNIIKCVANALSYLHHDCMPS 624
+ +K ++++ +YM +GSL +LR+ +V+ D ++ ++ C A+ YL + +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC--EAMEYLEGN---N 137
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEK 684
VHRD+++ N+L++ A V+DFG L SS + + APE + K
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 685 CDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743
DV+SFG++ E+ GR P +K +D D PP VM++
Sbjct: 195 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG--CPPAVYEVMKN--- 249
Query: 744 VTTVALACLHSKPKFRPTMQRVCQEF 769
C H RP+ ++ ++
Sbjct: 250 -------CWHLDAAMRPSFLQLREQL 268
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + GK VA+KK L + + E F NE ++ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-----NEVVIMRDYHHDNVVDM 107
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALSYLH+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------TVCLSVLRALSYLHNQ 160
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL S ++DFG + + R + GT ++APE+ +
Sbjct: 161 ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLH-RAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G G V A + +GK+VA+KK+ R + FN E ++ H N+V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDYQHENVVEMY 214
Query: 565 GFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-------VCLAVLQALSVLHAQ- 266
Query: 622 MPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVV 681
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 682 TEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 506 CIGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G G +G V K ++ G+ A+K + + + ++ T S E +L ++ H NI+KL
Sbjct: 33 VLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
Y F K +L+ + G LF + + +D II+ V + ++Y+H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKN--- 145
Query: 624 SIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
IVHRD+ N+LL SK + + DFG + ++ + + GT YIAPE+ +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHG-T 203
Query: 681 VTEKCDVYSFGVVALEVLMG 700
EKCDV+S GV+ +L G
Sbjct: 204 YDEKCDVWSTGVILYILLSG 223
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 103
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 158
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + ++ GT YIAPE+
Sbjct: 159 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 215
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 506 CIGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G G +G V K ++ G+ A+K + + + ++ T S E +L ++ H NI+KL
Sbjct: 57 VLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
Y F K +L+ + G LF + + +D II+ V + ++Y+H +
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKN--- 169
Query: 624 SIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
IVHRD+ N+LL SK + + DFG + ++ + + Y YIAPE+ +
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-T 227
Query: 681 VTEKCDVYSFGVVALEVLMG 700
EKCDV+S GV+ +L G
Sbjct: 228 YDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 506 CIGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G G +G V K ++ G+ A+K + + + ++ T S E +L ++ H NI+KL
Sbjct: 56 VLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
Y F K +L+ + G LF + + +D II+ V + ++Y+H +
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKN--- 168
Query: 624 SIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
IVHRD+ N+LL SK + + DFG + ++ + + Y YIAPE+ +
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-T 226
Query: 681 VTEKCDVYSFGVVALEVLMG 700
EKCDV+S GV+ +L G
Sbjct: 227 YDEKCDVWSTGVILYILLSG 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G +G V G VA+K + T + +F EA V++++ H N+V+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 254
Query: 567 CLHKKC-MFLIYKYMKRGSLFCFLRNDYEAVVL-DWTMRVNIIKCVANALSYLHHDCMPS 624
+ +K ++++ +YM +GSL +LR+ +V+ D ++ ++ C A+ YL + +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC--EAMEYLEGN---N 309
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEK 684
VHRD+++ N+L++ A V+DFG L SS + + APE + K
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 685 CDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743
DV+SFG++ E+ GR P +K +D D PP VM++
Sbjct: 367 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG--CPPAVYDVMKN--- 421
Query: 744 VTTVALACLHSKPKFRPTMQRVCQEF 769
C H RPT ++ ++
Sbjct: 422 -------CWHLDAATRPTFLQLREQL 440
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK+ H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNI 110
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 280
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 281 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 317
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 70 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 126
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 127 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 237
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 238 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 265
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + +GK+VA+KK L + + E F NE ++ H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 82
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 135
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 45/288 (15%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK+ H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNI 96
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 266
Query: 731 P------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
P PV R++ Q C +P+ RP + + C
Sbjct: 267 PPKNCPGPVYRIMTQ-----------CWQHQPEDRPNFAIILERIEYC 303
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 101
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 156
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + ++ GT YIAPE+
Sbjct: 157 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 213
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 41/281 (14%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIA-HRNIV 561
+G G +G V +A GK A+ K+ + T + + +E ++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV-------LDWTMRVNIIKCVANAL 614
L G C H + +I +Y G L FLR EA + L+ ++ VA +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT----YGY 670
++L + +HRD+++ N+LL + A + DFG AR + +DS+ IV G +
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKW 228
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDVLDS 727
+APE + V T + DV+S+G++ E+ + +PG +L++
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---------------ILVNSKFY 273
Query: 728 RLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVC 766
+L +M + ++ AC +P RPT Q++C
Sbjct: 274 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 314
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKK--LHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG G G V A + +GK+VA+KK L + + E F NE ++ H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 86
Query: 564 YGFCLHKKCMFLIYKYMKRGSL---FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
Y L ++++ ++++ G+L R + E + + V ALS LH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 139
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 140 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +E++ G P
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 70 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 126
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 127 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 237
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 238 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 122
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 233
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 234 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 261
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 490 AFEDIIKAT-EDFDIKYC--IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTF 541
AFED E+ +K+ +G G +GSV Q G+VVA+KKL + TEE
Sbjct: 1 AFEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--H 57
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
F+ E +L + H NIVK G C ++ + LI +++ GSL +L+ E + D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--D 115
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + + YL +HRD+++ NIL+ ++ + DFG ++L D
Sbjct: 116 HIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 660 NRTIVAGTYG---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ + APE + DV+SFGVV E+
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 507 IGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G G +G V K ++ G+ A+K + + + ++ T S E +L ++ H NI+KLY
Sbjct: 40 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
F K +L+ + G LF + + +D II+ V + ++Y+H +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKN---K 152
Query: 625 IVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVV 681
IVHRD+ N+LL SK + + DFG + ++ + + Y YIAPE+ +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-TY 210
Query: 682 TEKCDVYSFGVVALEVLMG 700
EKCDV+S GV+ +L G
Sbjct: 211 DEKCDVWSTGVILYILLSG 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVV--ALKKLHRAETEETTFFNSFQNEAHVL 552
+D + +G G +G V + + P+GK V A+K L + + F E + +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ HRN+++LYG L M ++ + GSL LR +L R + VA
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAE 122
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---YG 669
+ YL +HRD+++ N+LL ++ + DFG R L + + + +
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
+ APE T + D + FGV E+ G+ P Q + ID R
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGER 233
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761
L P D QDI V + C KP+ RPT
Sbjct: 234 LPRPED--CPQDIY---NVMVQCWAHKPEDRPT 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 30/219 (13%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
D + C+G G YG V++ G+ VA+K + +E ++F + E + + H
Sbjct: 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFR--ETELYNTVMLRHE 62
Query: 559 NIVKLYGFCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
NI+ + + ++LI Y + GSL+ +L + LD + I+ +A+ L
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGL 118
Query: 615 SYLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA---- 665
++LH + P+I HRD+ S NIL+ + +AD G A ++ S S+N+ V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPR 177
Query: 666 -GTYGYIAPE-LAYTMVVT-----EKCDVYSFGVVALEV 697
GT Y+APE L T+ V ++ D+++FG+V EV
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 110
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 280
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 281 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 317
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 87
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 257
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 258 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 294
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 506 CIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
C+G G YG V++ G+ VA+K + +E ++F + E + + H NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFR--ETELYNTVMLRHENILGFIA 98
Query: 566 FCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
+ + ++LI Y + GSL+ +L + LD + I+ +A+ L++LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 622 M-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-----GTYGYI 671
P+I HRD+ S NIL+ + +AD G A ++ S S+N+ V GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 672 APE-LAYTMVVT-----EKCDVYSFGVVALEV 697
APE L T+ V ++ D+++FG+V EV
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 77
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 132
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + ++ GT YIAPE+
Sbjct: 133 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 189
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 95
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRT--IVAGTYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 265
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 266 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 302
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 102
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRT--IVAGTYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 272
Query: 731 P------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
P PV R++ Q C +P+ RP + + C
Sbjct: 273 PPKNCPGPVYRIMTQ-----------CWQHQPEDRPNFAIILERIEYC 309
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 96
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 266
Query: 731 P------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
P PV R++ Q C +P+ RP + + C
Sbjct: 267 PPKNCPGPVYRIMTQ-----------CWQHQPEDRPNFAIILERIEYC 303
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 95
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRT--IVAGTYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 265
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 266 PPKNCPGP-----VYRIMTQCWQHQPEDRPNFAIILERIEYC 302
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 112
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRT--IVAGTYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 282
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 283 PPKN-----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 319
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 506 CIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
C+G G YG V++ G+ VA+K + +E ++F + E + + H NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF--SSRDEKSWFR--ETELYNTVMLRHENILGFIA 69
Query: 566 FCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
+ + ++LI Y + GSL+ +L + LD + I+ +A+ L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 622 M-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-----GTYGYI 671
P+I HRD+ S NIL+ + +AD G A ++ S S+N+ V GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 672 APE-LAYTMVVT-----EKCDVYSFGVVALEV 697
APE L T+ V ++ D+++FG+V EV
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + + VA+K L + +F+ F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NIL+++ V DFG AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTA 183
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 475 KSGDVFSIWNYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHR 533
++G+ S W EDI K F+ K +GTG + V A+ GK+ A+K + +
Sbjct: 5 ENGESSSSWKKQA----EDIKKI---FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPK 57
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ +S +NE VL KI H NIV L ++L+ + + G LF +
Sbjct: 58 KALKGKE--SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI---V 112
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA---FVADFGT 650
E +I+ V +A+ YLH IVHRD+ N+L S+ E ++DFG
Sbjct: 113 EKGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGL 169
Query: 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+++ + + GT GY+APE+ ++ D +S GV+A +L G P
Sbjct: 170 SKM-EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 74
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 79
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 134
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + + GT YIAPE+
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 79
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 134
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + + GT YIAPE+
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ ++ ++ GK+V L + E E + +AH+++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSMEISIHRSLAHQHV 83
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
V +GF +F++ + +R SL R + +R ++ C YLH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-----QYLH 138
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
+ ++HRD+ N+ LN LE + DFG A ++ D + + GT YIAPE+
Sbjct: 139 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + DV+S G + +L+G+ P E
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 507 IGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
IG G +G V++A+ P +VA+K L E FQ EA ++++ + NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK--EEASADMQADFQREAALMAEFDNPNI 112
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL-----DWTMRVN---------- 605
VKL G C K M L+++YM G L FLR+ V D + R
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 606 ------IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
I + VA ++YL VHRD+++ N L+ + +ADFG +R + S
Sbjct: 173 CAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 660 NRTI--VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ A ++ PE + T + DV+++GVV E+
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TEE + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 122
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRT--IVAGTYGYI 671
L + +HRDI++ N LL VA DFG AR + S R ++
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 292
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 293 PPKN-----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 329
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 506 CIGTGGYGSVY--KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G G +G V K ++ G+ A+K + + + ++ T S E +L ++ H NI KL
Sbjct: 33 VLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFL--RNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
Y F K +L+ + G LF + R + V II+ V + ++Y H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYXHKN- 145
Query: 622 MPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
IVHRD+ N+LL SK + + DFG + ++ + + GT YIAPE+ +
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-GTAYYIAPEVLHG 202
Query: 679 MVVTEKCDVYSFGVVALEVLMG 700
EKCDV+S GV+ +L G
Sbjct: 203 -TYDEKCDVWSTGVILYILLSG 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 45/288 (15%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 136
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + R ++
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 306
Query: 731 P------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
P PV R++ Q C +P+ RP + + C
Sbjct: 307 PPKNCPGPVYRIMTQ-----------CWQHQPEDRPNFAIILERIEYC 343
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + + VA+K L + +F+ F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NI++++ V DFG AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIA-HRNIV 561
+G G +G V +A GK A+ K+ + T + + +E ++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
L G C H + +I +Y G L FLR ++ VL+ I A+ LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRR--KSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 622 M----------PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT---- 667
+ +HRD+++ N+LL + A + DFG AR + +DS+ IV G
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLP 229
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+S+G++ E+ + +PG +L++
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---------------ILVNS 274
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVC 766
+L +M + ++ AC +P RPT Q++C
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + + VA+K L + +F+ F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NI++++ V DFG AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 54/294 (18%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIA-HRNIV 561
+G G +G V +A GK A+ K+ + T + + +E ++S + H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV--------------------LDWT 601
L G C H + +I +Y G L FLR EA++ L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 602 MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661
++ VA +++L + +HRD+++ N+LL + A + DFG AR + +DS+
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-- 213
Query: 662 TIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXX 714
IV G ++APE + V T + DV+S+G++ E+ + +PG
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---------- 263
Query: 715 XDQKIMLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVC 766
+L++ +L +M + ++ AC +P RPT Q++C
Sbjct: 264 -----ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 115/282 (40%), Gaps = 33/282 (11%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 113
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG AR + R ++
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 283
Query: 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
PP + V + C +P+ RP + + C
Sbjct: 284 PPKN-----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 320
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 496 KATED----FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAH 550
K ED +D + +GTG + V A+ K+VA+K + + E S +NE
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIA 68
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
VL KI H NIV L ++LI + + G LF + D + +I V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 611 ANALSYLHHDCMPSIVHRDISSNNIL---LNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
+A+ YLH IVHRD+ N+L L+ + ++DFG +++ D S T GT
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGT 181
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY+APE+ ++ D +S GV+A +L G P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQN 547
+ +++ +DF+I IG G + V ++ G+V A+K +++ + + + F+
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
E VL R I +L+ + ++L+ +Y G L L E + + M +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE--MARFYL 168
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-G 666
+ A+ +H VHRDI +NILL+ +ADFG+ L +D + R++VA G
Sbjct: 169 AEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 667 TYGYIAPELAYTMVVTE-------KCDVYSFGVVALEVLMGRHP 703
T Y++PE+ + +CD ++ GV A E+ G+ P
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 502 DIKY--CIGTGGYGSVYKAQLPNGKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
DIK+ IG G +G V KA++ + A+K++ +++ F E VL K+
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKLG 73
Query: 557 HR-NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-------------DYEAVVLDWTM 602
H NI+ L G C H+ ++L +Y G+L FLR + A L
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
++ VA + YL +HRD+++ NIL+ A +ADFG +R
Sbjct: 134 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV 184
Query: 663 IVAGTYG-----YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
V T G ++A E V T DV+S+GV+ E++
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
F+I IG G +G V Q + K+ A+K +++ + E + E ++ + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
+V L+ ++ MF++ + G L L+ + + T+++ I + V AL YL +
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVM-ALDYLQN 133
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL---- 675
I+HRD+ +NILL+ + DF A +L ++ T +AGT Y+APE+
Sbjct: 134 Q---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSR 189
Query: 676 ---AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+ V D +S GV A E+L GR P
Sbjct: 190 KGAGYSFAV----DWWSLGVTAYELLRGRRP 216
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ Q+ P+ VA+K L +E+ F EA ++SK H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 96
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSY 616
V+ G L F++ + M G L FLR + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVA---DFGTARLLDSDSSNRTIVAG--TYGYI 671
L + +HRDI++ N LL VA DFG A+ + S R ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLS 730
PE + T K D +SFGV+ E+ +G P +Q+++ R+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSGGRMD 266
Query: 731 P------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772
P PV R++ Q C +P+ RP + + C
Sbjct: 267 PPKNCPGPVYRIMTQ-----------CWQHQPEDRPNFAIILERIEYC 303
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEA--HVLS 553
AT ++ IG G YG+VYKA+ P+ G VALK + EE ++ + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 554 KIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIK 608
H N+V+L C + + L+++++ + L +L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 609 CVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
L +LH +C IVHRD+ NIL+ S +ADFG AR+ + +V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-TL 175
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEA--HVLS 553
AT ++ IG G YG+VYKA+ P+ G VALK + EE ++ + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 554 KIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIK 608
H N+V+L C + + L+++++ + L +L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 609 CVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
L +LH +C IVHRD+ NIL+ S +ADFG AR+ + +V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-TL 175
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 502 DIKY--CIGTGGYGSVYKAQLPNGKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
DIK+ IG G +G V KA++ + A+K++ +++ F E VL K+
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKLG 83
Query: 557 HR-NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-------------DYEAVVLDWTM 602
H NI+ L G C H+ ++L +Y G+L FLR + A L
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
++ VA + YL +HRD+++ NIL+ A +ADFG +R
Sbjct: 144 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV 194
Query: 663 IVAGTYG-----YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
V T G ++A E V T DV+S+GV+ E++
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 496 KATED----FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAH 550
K ED +D + +GTG + V A+ K+VA+K + + E S +NE
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIA 68
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
VL KI H NIV L ++LI + + G LF + D + +I V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 611 ANALSYLHHDCMPSIVHRDISSNNIL---LNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
+A+ YLH IVHRD+ N+L L+ + ++DFG +++ D S T GT
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGT 181
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY+APE+ ++ D +S GV+A +L G P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 507 IGTGGYGSVYKA-----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +GSV Q G+VVA+KKL + TEE F+ E +L + H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEILKSLQHDNIV 75
Query: 562 KLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C ++ + LI +Y+ GSL +L+ E + D + + + YL
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 131
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
+HR++++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
+ DV+SFGVV E+
Sbjct: 191 TESKFSVASDVWSFGVVLYELF 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ----LPNGKVVALKKLHRA----ETEETTFFNSFQNEAH 550
E F++ +G GGYG V++ + GK+ A+K L +A ++T + +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 551 VLSKIAHRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+L ++ H IV L Y F K ++LI +Y+ G LF L + E + ++ T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
++ AL +LH I++RD+ NI+LN + + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APE+ D +S G + ++L G P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQN-EAHV 551
I K TE +K +G+G +G+V+K +P G+ + + + E+ + SFQ H+
Sbjct: 27 IFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHM 84
Query: 552 LS--KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRVN 605
L+ + H +IV+L G C + L+ +Y+ GSL +R A+ +L+W +++
Sbjct: 85 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI- 142
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTI 663
A + YL M VHR++++ N+LL S + VADFG A LL D +
Sbjct: 143 -----AKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLI 722
++A E + T + DV+S+GV E++ G P + L
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP------------YAGLRLA 242
Query: 723 DVLDSRLSPPVDRMVMQDI--VLVTTVALACLHSKPKFRPTMQRVCQEF 769
+V D L +R+ I + V V + C RPT + + EF
Sbjct: 243 EVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 510 GGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK--IAHRNIVKLYGFC 567
G +G V+KAQL N VA+K + + S+Q+E + S + H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQ------SWQSEREIFSTPGMKHENLLQF--IA 76
Query: 568 LHKKC------MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
K+ ++LI + +GSL +L+ + ++ W ++ + ++ LSYLH D
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDV 132
Query: 622 --------MPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS--SNRTIVAGTYGYI 671
PSI HRD S N+LL S L A +ADFG A + + GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 672 APELAYTMVVTE-----KCDVYSFGVVALEVL 698
APE+ + + + D+Y+ G+V E++
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 45/285 (15%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIA-HRNIV 561
+G G +G V +A GK A+ K+ + T + + +E ++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV-----------NIIKCV 610
L G C H + +I +Y G L FLR + D + + V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT--- 667
A +++L + +HRD+++ N+LL + A + DFG AR + +DS+ IV G
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARL 228
Query: 668 -YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLID 723
++APE + V T + DV+S+G++ E+ + +PG +L++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---------------ILVN 273
Query: 724 VLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVC 766
+L +M + ++ AC +P RPT Q++C
Sbjct: 274 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 496 KATED----FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAH 550
K ED +D + +GTG + V A+ K+VA+K + + E S +NE
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIA 68
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
VL KI H NIV L ++LI + + G LF + D + +I V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 611 ANALSYLHHDCMPSIVHRDISSNNIL---LNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
+A+ YLH IVHRD+ N+L L+ + ++DFG +++ D S T GT
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGT 181
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY+APE+ ++ D +S GV+A +L G P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQN-EAHV 551
I K TE +K +G+G +G+V+K +P G+ + + + E+ + SFQ H+
Sbjct: 9 IFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHM 66
Query: 552 LS--KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV----VLDWTMRVN 605
L+ + H +IV+L G C + L+ +Y+ GSL +R A+ +L+W +++
Sbjct: 67 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI- 124
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTI 663
A + YL M VHR++++ N+LL S + VADFG A LL D +
Sbjct: 125 -----AKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLI 722
++A E + T + DV+S+GV E++ G P + L
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP------------YAGLRLA 224
Query: 723 DVLDSRLSPPVDRMVMQDI--VLVTTVALACLHSKPKFRPTMQRVCQEF 769
+V D L +R+ I + V V + C RPT + + EF
Sbjct: 225 EVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEA--HVLS 553
AT ++ IG G YG+VYKA+ P+ G VALK + EE ++ + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 554 KIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIK 608
H N+V+L C + + L+++++ + L +L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 609 CVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
L +LH +C IVHRD+ NIL+ S +ADFG AR+ + +V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TL 175
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 496 KATED----FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAH 550
K ED +D + +GTG + V A+ K+VA+K + + E S +NE
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIA 68
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
VL KI H NIV L ++LI + + G LF + D + +I V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 611 ANALSYLHHDCMPSIVHRDISSNNIL---LNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
+A+ YLH IVHRD+ N+L L+ + ++DFG +++ D S T GT
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGT 181
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY+APE+ ++ D +S GV+A +L G P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ----LPNGKVVALKKLHRA----ETEETTFFNSFQNEAH 550
E F++ +G GGYG V++ + GK+ A+K L +A ++T + +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 551 VLSKIAHRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+L ++ H IV L Y F K ++LI +Y+ G LF L + E + ++ T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
++ AL +LH I++RD+ NI+LN + + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APE+ D +S G + ++L G P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 499 EDF-DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +I +G G +G VYKAQ V+A K+ ++EE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NIVKL ++ ++++ ++ G++ + + E + + ++V + K +AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQV-VCKQTLDALNYL 151
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + I+HRD+ + NIL + +ADFG + R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 678 TMVVTE-----KCDVYSFGVVALEV 697
+ K DV+S G+ +E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V K Q P+G ++A K +H + N E VL +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL--EIKPAIRNQIIRELQVLHECNS 73
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ EA + + + V L+YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---EAKRIPEEILGKVSIAVLRGLAYL 130
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y+APE
Sbjct: 131 REKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMAPERL 185
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF+I IG G +G V ++ N ++ A+K L++ E + F+ E VL
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV--ANALS 615
+ I L+ + ++L+ Y G L L + +E + + R I + V +++
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-GTYGYIAPE 674
LH+ VHRDI +N+LL+ +ADFG+ ++ D + ++ VA GT YI+PE
Sbjct: 193 QLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 675 LAYTMV-----VTEKCDVYSFGVVALEVLMGRHP 703
+ M +CD +S GV E+L G P
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF+I IG G +G V ++ N ++ A+K L++ E + F+ E VL
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV--ANALS 615
+ I L+ + ++L+ Y G L L + +E + + R I + V +++
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-GTYGYIAPE 674
LH+ VHRDI +N+LL+ +ADFG+ ++ D + ++ VA GT YI+PE
Sbjct: 209 QLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 675 LAYTMV-----VTEKCDVYSFGVVALEVLMGRHP 703
+ M +CD +S GV E+L G P
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + VA+K L + +F+ F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NI++++ V DFG AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 499 EDF-DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +I +G G +G VYKAQ V+A K+ ++EE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NIVKL ++ ++++ ++ G++ + + E + + ++V + K +AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQV-VCKQTLDALNYL 151
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + I+HRD+ + NIL + +ADFG + R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 678 TMVVTE-----KCDVYSFGVVALEV 697
+ K DV+S G+ +E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 499 EDF-DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF +I +G G +G VYKAQ V+A K+ ++EE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NIVKL ++ ++++ ++ G++ + + E + + ++V + K +AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQV-VCKQTLDALNYL 151
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + I+HRD+ + NIL + +ADFG + R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 678 TMVVTE-----KCDVYSFGVVALEV 697
+ K DV+S G+ +E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 506 CIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
C+G G YG V++ L +G+ VA+K + +E ++F + VL + H NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIF--SSRDEQSWFRETEIYNTVL--LRHDNILGFIA 69
Query: 566 FCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
+ + ++LI Y + GSL+ FL+ L+ + + + A L++LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ----TLEPHLALRLAVSAACGLAHLHVEI 125
Query: 622 M-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-----GTYGYI 671
P+I HRD S N+L+ S L+ +AD G A ++ S S+ + GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 672 APELAYTMVVTE------KCDVYSFGVVALEV 697
APE+ + T+ D+++FG+V E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 49/319 (15%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G YG V K + + G++VA+KK ++ ++ + + E +L ++ H N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLVNLLE 91
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV--LDWTMRVNIIKCVANALSYLHHDCMP 623
C KK +L+++++ L +D E LD+ + + + N + + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
+I+HRDI NIL++ + DFG AR L + T Y APEL V
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 684 KC-DVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQ--KIML----------------- 721
K DV++ G + E+ MG PG+ DQ IM+
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGD-------SDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 722 ----IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALV 777
+ + + + P++R + +V +A CLH P RP C E L +
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP----FCAELLHHDFFQM 312
Query: 778 NPFEEISIWQLRNQINTTS 796
+ F E +L+ ++ +
Sbjct: 313 DGFAERFSQELQLKVQKDA 331
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I Y +G+L +LR D V + +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 273
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 274 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 313
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GT G V K +L G VA+K L+R + + E L H +I+KLY
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
+F++ +Y+ G LF ++ + LD + + + + + Y H +V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEKC 685
HRD+ N+LL++ + A +ADFG + ++ SD G+ Y APE ++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S GV+ +L G P
Sbjct: 198 DIWSSGVILYALLCGTLP 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 38/233 (16%)
Query: 495 IKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
++ DF+ +G G +G V KA+ + + A+KK+ E + +T + E +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVMLLA 57
Query: 554 KIAHRNIVKLYGFCLHKK-------------CMFLIYKYMKRGSLFCFLRNDYEAVVLDW 600
+ H+ +V+ Y L ++ +F+ +Y + G+L+ + ++ D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR-------- 652
R + + + ALSY+H I+HRD+ NI ++ + DFG A+
Sbjct: 118 YWR--LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 653 -LLDSD-----SSNRTIVAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVL 698
LDS S N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + VA+K L + +F+ F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NI++++ V DFG AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 89
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 150 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 262
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 263 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 302
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 502 DIKY--CIGTGGYGSVYKAQLPNGKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
DIK+ IG G +G V KA++ + A+K++ +++ F E VL K+
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKLG 80
Query: 557 HR-NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-------------DYEAVVLDWTM 602
H NI+ L G C H+ ++L +Y G+L FLR + A L
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
++ VA + YL +HR++++ NIL+ A +ADFG +R
Sbjct: 141 LLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR------GQEV 191
Query: 663 IVAGTYG-----YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
V T G ++A E V T DV+S+GV+ E++
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 87
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 148 SCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 260
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 261 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 92
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 153 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 265
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 266 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ P V VA+K L TE+ + +E ++ I H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 146
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN----------DYEAVVLDWTMRVNII 607
+NI+ L G C +++I +Y +G+L +LR D V + +++
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
C + + +HRD+++ N+L+ +ADFG AR +++ + G
Sbjct: 207 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 668 --YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +G P +++ +
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------EELFKLLK 319
Query: 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 320 EGHRMDKPANCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 359
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQL--PNGKVVALK-KLHRAETEETTFFNSFQN 547
ED++ + F + +G G +GSV +AQL +G V + K+ +A+ ++ F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCM------FLIYKYMKRGSLFCFL---RNDYEAVVL 598
EA + + H ++ KL G L + +I +MK G L FL R L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
V + +A + YL + +HRD+++ N +L + VADFG +R + S
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 659 SNRTIVAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
R A ++A E + T DV++FGV E++
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
++ +++ +G GG V+ A+ L + VA+K L + +F+ F+ EA + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 557 HRNIVKLYGFCLHKKCM----FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
H IV +Y + +++ +Y+ +L + + + + +I
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 144
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----TIVAGTY 668
AL++ H + I+HRD+ NI++++ V DFG AR + +DS N V GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 200
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++PE A V + DVYS G V EVL G P
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEA 549
K ++++D+K +G G + V + K++ KKL + F + EA
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREA 79
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+ K+ H NIV+L+ + +L++ + G LF + V ++ + C
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF------EDIVAREFYSEADASHC 133
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAG 666
+ L + + IVHR++ N+LL SK + +ADFG A + +DS AG
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAG 192
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
LS+ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 116 LSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 125
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 182
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 183 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 237
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 68
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 122
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 506 CIGTGGYGSVYKAQLPNGK------VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+G G +G V KA + K VA+K L E + +E +VL ++ H +
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPH 87
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-----------------------DYEAV 596
++KLYG C + LI +Y K GSL FLR D A+
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLD 655
+ ++ ++ + YL S+VHRD+++ NIL+ + ++DFG +R + +
Sbjct: 148 TM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 656 SDSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
DS R+ ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 66
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 123
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
I+HRD+ +NIL+NS+ E + DFG + L + +N + GT Y++PE
Sbjct: 124 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV--GTRSYMSPERLQ 179
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 498 TEDFDIKYCIGTGGYGSVYKA-QLPNG-----KVVALKKLHRAETEETTFFNSFQNEAHV 551
T+++ + +G G + V + ++P G K++ KKL + ++ + EA +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK------LEREARI 56
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+L+ + +L++ + G LF + V ++ + C+
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQ 110
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTY 668
L ++H + IVHRD+ N+LL SK + +ADFG A + D AGT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 498 TEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
T+++ + +G G + V + ++P G+ A K ++ + + EA + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLK 61
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NIV+L+ + +L++ + G LF + V ++ + C+ L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILES 115
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAP 673
++H + IVHRD+ N+LL SK + +ADFG A + D AGT GY++P
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ + D+++ GV+ +L+G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 63
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 175
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 507 IGTGGYGSVY-KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G + V+ Q GK+ ALK + ++ + S +NE VL KI H NIV L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS---SLENEIAVLKKIKHENIVTLED 73
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
+L+ + + G LF + D ++ +I+ V +A+ YLH + I
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN---GI 127
Query: 626 VHRDISSNNILL-----NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
VHRD+ N+L NSK+ + DFG +++ + + GT GY+APE+
Sbjct: 128 VHRDLKPENLLYLTPEENSKI--MITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 681 VTEKCDVYSFGVVALEVLMGRHP 703
++ D +S GV+ +L G P
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPP 206
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 68
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 122
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 507 IGTGGYG-SVYKAQLPNGKVVALK-----KLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
IG G +G ++ +G+ +K ++ E EE+ + E VL+ + H NI
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES------RREVAVLANMKHPNI 85
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRND-----YEAVVLDWTMRVNIIKCVANALS 615
V+ ++++ Y + G LF + E +LDW +++ C+A L
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI----CLA--LK 139
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
++H I+HRDI S NI L + DFG AR+L+S GT Y++PE+
Sbjct: 140 HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
K D+++ G V E+ +H E
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 63
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 175
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEA 549
K ++++D+K +G G + V + K++ KKL + F + EA
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREA 56
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+ K+ H NIV+L+ + +L++ + G LF + V ++ + C
Sbjct: 57 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF------EDIVAREFYSEADASHC 110
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAG 666
+ L + + IVHR++ N+LL SK + +ADFG A ++ DS AG
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAG 169
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 114
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 171
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 63
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 175
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 90
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 147
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 148 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 202
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 507 IGTGGYGSVYKAQLPN-GKVVALKKL---HRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
+G G + +VYKA+ N ++VA+KK+ HR+E ++ + + E +L +++H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELSHPNIIG 76
Query: 563 LYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA------NALSY 616
L HK + L++ +M+ D E ++ D ++ + A L Y
Sbjct: 77 LLDAFGHKSNISLVFDFME---------TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
LH I+HRD+ NN+LL+ +ADFG A+ S + T Y APEL
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 677 Y-TMVVTEKCDVYSFGVVALEVLM 699
+ + D+++ G + E+L+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 65
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 119
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 63
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 175
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEA 549
K ++++D+K +G G + V + K++ KKL + F + EA
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREA 56
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+ K+ H NIV+L+ + +L++ + G LF + V ++ + C
Sbjct: 57 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF------EDIVAREFYSEADASHC 110
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAG 666
+ L + + IVHR++ N+LL SK + +ADFG A + +DS AG
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAG 169
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 63
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 175
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEA 549
K ++++D+K +G G + V + K++ KKL + F + EA
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREA 55
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+ K+ H NIV+L+ + +L++ + G LF + V ++ + C
Sbjct: 56 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF------EDIVAREFYSEADASHC 109
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAG 666
+ L + + IVHR++ N+LL SK + +ADFG A + +DS AG
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAG 168
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T GY++PE+ ++ D+++ GV+ +L+G P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 62/304 (20%)
Query: 487 GRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQ 546
G AF +++AT G G +V K V LK A+ +E +
Sbjct: 55 GAGAFGKVVEAT-------AFGLGKEDAVLKV-----AVKMLKSTAHADEKE-----ALM 97
Query: 547 NEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-- 603
+E ++S + H NIV L G C H + +I +Y G L FLR L+++
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK-RPPGLEYSYNPS 156
Query: 604 ------------VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651
++ VA +++L + +HRD+++ N+LL + A + DFG A
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 652 RLLDSDSSNRTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPG 704
R + +DS+ IV G ++APE + V T + DV+S+G++ E+ + +PG
Sbjct: 214 RDIMNDSN--YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
Query: 705 EXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTM 762
+L++ +L +M + ++ AC +P RPT
Sbjct: 272 ---------------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 316
Query: 763 QRVC 766
Q++C
Sbjct: 317 QQIC 320
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GT G + + QL G VA+K L+R + + E L H +I+KLY
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
F++ +Y+ G LF ++ V + R + + + +A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR-RLFQQILSAVDYCHRHM---VV 133
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEKC 685
HRD+ N+LL++ + A +ADFG + ++ SD G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S GV+ +L G P
Sbjct: 193 DIWSCGVILYALLCGTLP 210
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G+VY A+ + N +VVA+KK+ + + + E L K+ H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 566 FCLHKKCMFLIYKYM--KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
L + +L+ +Y L + + V + + L+YLH M
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLHSHNM- 175
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
+HRD+ + NILL+ + DFG+A ++ + GT ++APE+ M +
Sbjct: 176 --IHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 229
Query: 684 ---KCDVYSFGVVALEVLMGRHP 703
K DV+S G+ +E+ + P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 38/233 (16%)
Query: 495 IKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
++ DF+ +G G +G V KA+ + + A+KK+ E + +T + E +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVMLLA 57
Query: 554 KIAHRNIVKLYGFCLHKK-------------CMFLIYKYMKRGSLFCFLRNDYEAVVLDW 600
+ H+ +V+ Y L ++ +F+ +Y + +L+ + ++ D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR-------- 652
R + + + ALSY+H I+HRD+ NI ++ + DFG A+
Sbjct: 118 YWR--LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 653 -LLDSD-----SSNRTIVAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVL 698
LDS S N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 501 FDIKYCIGTGGYGSVY-KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
F K +G+G +G V+ + +G +K +++ ++ + E VL + H N
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPN 81
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
I+K++ M+++ + + G L + L ++K + NAL+Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+VH+D+ NIL + DFG A L SD + T AGT Y+APE+
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEV 197
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMG 700
+ VT KCD++S GVV +L G
Sbjct: 198 -FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+DF+ +G G G V+K + P+G V+A K +H + N E VL +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHECNS 82
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
IV YG + + ++M GSL L+ +A + + + V L+YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 139
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELA 676
I+HRD+ +NIL+NS+ E + DFG + +L+DS +++ GT Y++PE
Sbjct: 140 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERL 194
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D++S G+ +E+ +GR+P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 44/285 (15%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 92
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLRND------YEAVVLDWTMRVNIIKC--- 609
+V L G C + +I ++ K G+L +LR+ Y+ + D+ ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGT 667
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +PG + + +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------VKIDEE 255
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
RL RM D + L C H +P RPT + +
Sbjct: 256 FXRRLKEGT-RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
+GT G + + QL G VA+K L+R + + E L H +I+KLY
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626
F++ +Y+ G LF ++ V + R + + + +A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR-RLFQQILSAVDYCHRHM---VV 133
Query: 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEKC 685
HRD+ N+LL++ + A +ADFG + ++ SD G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 686 DVYSFGVVALEVLMGRHP 703
D++S GV+ +L G P
Sbjct: 193 DIWSCGVILYALLCGTLP 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 506 CIGTGGYGSVYKAQLPNGK------VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+G G +G V KA + K VA+K L E + +E +VL ++ H +
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPH 87
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-----------------------DYEAV 596
++KLYG C + LI +Y K GSL FLR D A+
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLD 655
+ ++ ++ + YL +VHRD+++ NIL+ + ++DFG +R + +
Sbjct: 148 TM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 656 SDSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
DS R+ ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G+VY A+ + N +VVA+KK+ + + + E L K+ H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 566 FCLHKKCMFLIYKYM--KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMP 623
L + +L+ +Y L + + V + + L+YLH M
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLHSHNM- 136
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
+HRD+ + NILL+ + DFG+A ++ + GT ++APE+ M +
Sbjct: 137 --IHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 190
Query: 684 ---KCDVYSFGVVALEVLMGRHP 703
K DV+S G+ +E+ + P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQD-----LKTFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 491 FEDIIKATEDFDIKYCIGT-GGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEA 549
+E + + D IG G +G VYKAQ V+A K+ ++EE + E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEI 58
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
+L+ H NIVKL ++ ++++ ++ G++ + + E + + ++V + K
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQV-VCKQ 116
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTY 668
+AL+YLH + I+HRD+ + NIL + +ADFG +A+ + R GT
Sbjct: 117 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 669 GYIAPELAYTMVVTE-----KCDVYSFGVVALEV 697
++APE+ + K DV+S G+ +E+
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 39/230 (16%)
Query: 506 CIGTGGYGSVYKAQLPNGK------VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+G G +G V KA + K VA+K L E + +E +VL ++ H +
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPH 87
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-----------------------DYEAV 596
++KLYG C + LI +Y K GSL FLR D A+
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656
+ ++ ++ + YL +VHRD+++ NIL+ + ++DFG +R +
Sbjct: 148 TM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 657 DSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+ S R+ ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINA 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKAQ-LPNG-KVVALKKLHRAETEETTFFNSFQNEA-- 549
+ +A + ++ IG G YG V+KA+ L NG + VALK++ EE ++ + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 550 HVLSKIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV 604
L H N+V+L+ C + + L+++++ + L +L E V T++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK- 123
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
+++ + L +LH +VHRD+ NIL+ S + +ADFG AR+ + ++V
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T Y APE+ D++S G + E + R P
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLSK 554
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 7 EDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKM 61
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H N+VK YG +L +Y G LF + D D + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYIA 672
YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+A
Sbjct: 119 VYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 673 PE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
PE L E DV+S G+V +L G P + D K
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L++ +A L + + +IK +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALT-GIPLPLIKSYLFQLL 113
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 18/228 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
APE L E DV+S G+V +L G P + D K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWK 221
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 504 KYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
+ +G G YG VY + L N +A+K++ ++ + E + + H+NIV+
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 563 LYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
G + + + + GSL LR+ + + + K + L YLH +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 141
Query: 623 PSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPEL--AYTM 679
IVHRDI +N+L+N+ ++DFGT++ L + GT Y+APE+
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 680 VVTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G +E+ G+ P
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 63
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 117
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 491 FEDIIKA-------TEDFDIKYCIGTGGYGSV----YKAQLPNGKVVALKKLHRAETEET 539
+E I+K ED+D+ IG G +G V +KA + KV A+K L + E +
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKR 116
Query: 540 TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLD 599
+ F E +++ +V+L+ K ++++ +YM G L + N Y+ V
Sbjct: 117 SDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YD-VPEK 174
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
W V AL +H ++HRD+ +N+LL+ +ADFGT +D
Sbjct: 175 WAKFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 660 NRTIVA-GTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHP 703
A GT YI+PE+ + +CD +S GV E+L+G P
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLSK 554
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 EDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKM 60
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ H N+VK YG +L +Y G LF + D D + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYIA 672
YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+A
Sbjct: 118 VYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 673 PE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
PE L E DV+S G+V +L G P + D K
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKTFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 115
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 499 EDFDIKYC--IGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHV 551
E+ +KY +G G +GSV + G +VA+K+L + ++ FQ E +
Sbjct: 8 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 64
Query: 552 LSKIAHRNIVKLYG--FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
L + IVK G + ++ + L+ +Y+ G L FL+ LD + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 122
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN---RTIVAG 666
+ + YL VHRD+++ NIL+ S+ +ADFG A+LL D R
Sbjct: 123 ICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ APE + + + DV+SFGVV E+
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 496 KATEDFDIKYCIGTGGYGSVYKAQ-LPNG-KVVALKKLHRAETEETTFFNSFQNEA--HV 551
+A + ++ IG G YG V+KA+ L NG + VALK++ EE ++ + A
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 552 LSKIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNI 606
L H N+V+L+ C + + L+++++ + L +L E V T++ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK-DM 125
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG 666
+ + L +LH +VHRD+ NIL+ S + +ADFG AR+ + ++V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV- 181
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T Y APE+ D++S G + E + R P
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 499 EDFDIKYC--IGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHV 551
E+ +KY +G G +GSV + G +VA+K+L + ++ FQ E +
Sbjct: 9 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 65
Query: 552 LSKIAHRNIVKLYG--FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
L + IVK G + ++ + L+ +Y+ G L FL+ LD + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 123
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN---RTIVAG 666
+ + YL VHRD+++ NIL+ S+ +ADFG A+LL D R
Sbjct: 124 ICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ APE + + + DV+SFGVV E+
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 504 KYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
+ +G G YG VY + L N +A+K++ ++ + E + + H+NIV+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 563 LYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
G + + + + GSL LR+ + + + K + L YLH +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 127
Query: 623 PSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPEL--AYTM 679
IVHRDI +N+L+N+ ++DFGT++ L + GT Y+APE+
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 680 VVTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G +E+ G+ P
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E ++I +G G +G V K + + A+K +++A + ++ E +L K+ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDH 80
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
NI+KL+ +++ + G LF + D IIK V + ++Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITYM 137
Query: 618 HHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
H +IVHRD+ NILL SK + + DFG + ++ + + GT YIAPE
Sbjct: 138 HK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPE 193
Query: 675 LAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ EKCDV+S GV+ +L G P
Sbjct: 194 VLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLY 564
+G G YG V+K+ G+VVA+KK+ A T +F+ E +L++++ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 565 GFCL--HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + ++L++ YM+ L +R A +L+ + ++ + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYME-TDLHAVIR----ANILEPVHKQYVVYQLIKVIKYLHSG-- 128
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARL---------------------LDSDSSNR 661
++HRD+ +NILLN++ VADFG +R D D
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 662 TIVAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVLMGR 701
T T Y APE L + T+ D++S G + E+L G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
APE L E DV+S G+V +L G P + D K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
APE L E DV+S G+V +L G P + D K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNG----KVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
F++ +G G +G V+ + +G ++ A+K L +A + + + E +L ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 557 HRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H IVKL Y F K ++LI +++ G LF L E + + ++ + + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE-LALALD 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH I++RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
T+ D +SFGV+ E+L G P + D+K + +L ++L P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ--------GKDRKETMTMILKAKLGMP 246
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQK 718
APE L E DV+S G+V +L G P + D K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 498 TEDFDIKYCIGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV 551
T+D+ + +G G + V + Q K++ KKL + ++ + EA +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK------LEREARI 83
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+L+ + +L++ + G LF + V ++ + C+
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIH 137
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTY 668
L ++H IVHRD+ N+LL SK + +ADFG A + + AGT
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ Y+ ++ GKVV L + +E E + + + ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-----KMSTEIAIHKSLDNPHV 104
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV---LDWTMRVNIIKCVANALSYL 617
V +GF ++++ + +R SL L +AV + MR I + YL
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H++ ++HRD+ N+ LN ++ + DFG A ++ D + + GT YIAPE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + D++S G + +L+G+ P E
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 60
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 117
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 118 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ Y+ ++ GKVV L + +E E + + + ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-----KMSTEIAIHKSLDNPHV 104
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV---LDWTMRVNIIKCVANALSYL 617
V +GF ++++ + +R SL L +AV + MR I + YL
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H++ ++HRD+ N+ LN ++ + DFG A ++ D + + GT YIAPE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + D++S G + +L+G+ P E
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 115
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA+K + + + ++ F+ E ++ + H NIVKL+
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 72
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNI---IKCVANALSYLHHDC 621
+K ++L+ +Y G +F +L V W + + +A+ Y H
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 622 MPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVV 681
IVHRD+ + N+LL++ + +ADFG + + T G+ Y APEL
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKY 182
Query: 682 T-EKCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 46/286 (16%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 92
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLRND------YEAVVLDWTMRVNIIKC--- 609
+V L G C + +I ++ K G+L +LR+ Y+ + D+ ++I C
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI-CYSF 151
Query: 610 -VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAG 666
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLID 723
++APE + V T + DV+SFGV+ E+ +PG + ID
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKID 253
Query: 724 VLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
R RM D + L C H +P RPT + +
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNG----KVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
F++ +G G +G V+ + +G ++ A+K L +A + + + E +L ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 557 HRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H IVKL Y F K ++LI +++ G LF L E + + ++ + + +A AL
Sbjct: 86 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE-LALALD 141
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH I++RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 142 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
T+ D +SFGV+ E+L G P + D+K + +L ++L P
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ--------GKDRKETMTMILKAKLGMP 247
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 114
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 113
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNG----KVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
F++ +G G +G V+ + +G ++ A+K L +A + + + E +L ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 557 HRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H IVKL Y F K ++LI +++ G LF L E + + ++ + + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE-LALALD 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH I++RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
T+ D +SFGV+ E+L G P + D+K + +L ++L P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ--------GKDRKETMTMILKAKLGMP 246
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 499 EDFDIKYC--IGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHV 551
E+ +KY +G G +GSV + G +VA+K+L + ++ FQ E +
Sbjct: 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 77
Query: 552 LSKIAHRNIVKLYG--FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
L + IVK G + ++ + L+ +Y+ G L FL+ LD + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 135
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN---RTIVAG 666
+ + YL VHRD+++ NIL+ S+ +ADFG A+LL D R
Sbjct: 136 ICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ APE + + + DV+SFGVV E+
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKAQ-LPNG-KVVALKKLHRAETEETTFFNSFQNEA-- 549
+ +A + ++ IG G YG V+KA+ L NG + VALK++ EE ++ + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 550 HVLSKIAHRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV 604
L H N+V+L+ C + + L+++++ + L +L E V T++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK- 123
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
+++ + L +LH +VHRD+ NIL+ S + +ADFG AR+ + ++V
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T Y APE+ D++S G + E + R P
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 115
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 40/248 (16%)
Query: 496 KATEDFDIKY----CIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV 551
K E +I Y IG G +G V++A+L VA+KK+ ++ F N E +
Sbjct: 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKN---RELQI 85
Query: 552 LSKIAHRNIVKLYGFCL----HKKCMF--LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
+ + H N+V L F K +F L+ +Y+ R L TM +
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPML 141
Query: 606 IIKC----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSN 660
+IK + +L+Y+H I HRDI N+LL+ + DFG+A++L + N
Sbjct: 142 LIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN 198
Query: 661 RTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQ 717
+ + Y Y APEL + T D++S G V E++ G+ PGE DQ
Sbjct: 199 VSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE-------SGIDQ 250
Query: 718 KIMLIDVL 725
+ +I VL
Sbjct: 251 LVEIIKVL 258
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 113
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 113
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ L++ +A L + + +IK +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALT-GIPLPLIKSYLFQLL 115
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ L++ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVAL K+ R +TE ++ E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVAL K+ R +TE ++ E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 114
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T T Y AP
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 499 EDFDIKYC--IGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHV 551
E+ +KY +G G +GSV + G +VA+K+L + ++ FQ E +
Sbjct: 5 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 61
Query: 552 LSKIAHRNIVKLYG--FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC 609
L + IVK G + + + L+ +Y+ G L FL+ LD + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 119
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
+ + YL VHRD+++ NIL+ S+ +ADFG A+LL D +
Sbjct: 120 ICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 670 ---YIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ APE + + + DV+SFGVV E+
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 113
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA- 556
+DFD+ IG G Y V +L ++ A+K + + + + Q E HV + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANA 613
H +V L+ + +F + +Y+ G L ++ E ++ +++ A
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------A 122
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L+YLH I++RD+ +N+LL+S+ + D+G + + GT YIAP
Sbjct: 123 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ D ++ GV+ E++ GR P
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G YG V QL +V VA+K + + + + E +
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 58
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 115
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 116 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 479 VFSIWNYDGRIAFEDIIKATED-----FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKL- 531
VF IW + + ++ D +DI +GTG +G V++ + G A K +
Sbjct: 136 VFDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 191
Query: 532 --HRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL 589
H ++ E + + E +S + H +V L+ M +IY++M G LF +
Sbjct: 192 TPHESDKE------TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245
Query: 590 RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL--EAFVAD 647
+++ + D V ++ V L ++H + + VH D+ NI+ +K E + D
Sbjct: 246 ADEHNKMSED--EAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLID 300
Query: 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
FG LD S + + GT + APE+A V D++S GV++ +L G P
Sbjct: 301 FGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 62
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANA 613
NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLLQG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L++ H ++HRD+ N+L+N++ +ADFG AR T Y AP
Sbjct: 117 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 674 E-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
E L + D++S G + E++ R PG+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 114
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DF IG+GG+G V+KA+ +GK +K++ + E+ + E L+K+ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-KYNNEKA------EREVKALAKLDHV 64
Query: 559 NIVKLYGFCL-----------------HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT 601
NIV Y C KC+F+ ++ +G+L ++ LD
Sbjct: 65 NIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKV 122
Query: 602 MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661
+ + + + + + Y+H +++RD+ +NI L + + DFG L +D R
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-GKR 178
Query: 662 TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
GT Y++PE + ++ D+Y+ G++ E+L
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ Y+ ++ GKVV L + +E E + + + ++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-----KMSTEIAIHKSLDNPHV 88
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV---LDWTMRVNIIKCVANALSYL 617
V +GF ++++ + +R SL L +AV + MR I + YL
Sbjct: 89 VGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYL 142
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H++ ++HRD+ N+ LN ++ + DFG A ++ D + + GT YIAPE+
Sbjct: 143 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + D++S G + +L+G+ P E
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA- 556
+DFD+ IG G Y V +L ++ A+K + + + + Q E HV + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANA 613
H +V L+ + +F + +Y+ G L ++ E ++ +++ A
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------A 118
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L+YLH I++RD+ +N+LL+S+ + D+G + + GT YIAP
Sbjct: 119 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ D ++ GV+ E++ GR P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
E ++I +G G +G V K + + A+K +++A + ++ E +L K+
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NI+KL+ +++ + G LF + D IIK V + ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITY 136
Query: 617 LHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
+H +IVHRD+ NILL SK + + DFG + ++ + + GT YIAP
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAP 192
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ EKCDV+S GV+ +L G P
Sbjct: 193 EVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA- 556
+DFD+ IG G Y V +L ++ A+K + + + + Q E HV + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANA 613
H +V L+ + +F + +Y+ G L ++ E ++ +++ A
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------A 133
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L+YLH I++RD+ +N+LL+S+ + D+G + + GT YIAP
Sbjct: 134 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ D ++ GV+ E++ GR P
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALK--KLHRAETEETTFFNSFQNEAHVLS 553
AT ++ IG G YG+VYKA+ P+ G VALK ++ S E +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 554 KIA---HRNIVKLYGFCLHKKC-----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
++ H N+V+L C + + L+++++ + L +L + T++ +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-D 124
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
+++ L +LH +C IVHRD+ NIL+ S +ADFG AR+ S T V
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALTPVV 180
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
T Y APE+ D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
E ++I +G G +G V K + + A+K +++A + ++ E +L K+
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NI+KL+ +++ + G LF + D IIK V + ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITY 136
Query: 617 LHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
+H +IVHRD+ NILL SK + + DFG + ++ + + GT YIAP
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAP 192
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ EKCDV+S GV+ +L G P
Sbjct: 193 EVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G GG+ Y+ ++ GKVV L + +E E + + + ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-----KMSTEIAIHKSLDNPHV 104
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVV---LDWTMRVNIIKCVANALSYL 617
V +GF ++++ + +R SL L +AV + MR I + YL
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H++ ++HRD+ N+ LN ++ + DFG A ++ D + + GT YIAPE+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHPGE 705
+ + D++S G + +L+G+ P E
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ + L+ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQD-----LKKFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 498 TEDFDIKYCIGTGGYGSVYK-AQLPNG-----KVVALKKLHRAETEETTFFNSFQNEAHV 551
T+++ + IG G + V + +L G K++ KKL + ++ + EA +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK------LEREARI 56
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+L+ + +L++ + G LF + V ++ + C+
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQ 110
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTY 668
L + H +VHRD+ N+LL SK + +ADFG A + D AGT
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + G+ VA+K + + + T+ F+ E ++ + H NIVKL+
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 77
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV----NIIKCVANALSYLHHD 620
+K ++LI +Y G +F +L V M+ + + + +A+ Y H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYL-------VAHGRMKEKEARSKFRQIVSAVQYCHQ- 129
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV 680
IVHRD+ + N+LL++ + +ADFG + T G+ Y APEL
Sbjct: 130 --KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQGKK 186
Query: 681 VT-EKCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ E L+++ ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-REPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 260
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 306
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNGKVVAL-------KKLHRAETEETTFFNSFQNEAHVLS 553
FDI+ IG G + +VYK L V + +KL ++E + F+ EA L
Sbjct: 30 FDIE--IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ------RFKEEAEXLK 80
Query: 554 KIAHRNIVKLY----GFCLHKKCMFLIYKYMKRGSLFCFLRN---DYEAVVLDWTMRVNI 606
+ H NIV+ Y KKC+ L+ + G+L +L+ V+ W ++
Sbjct: 81 GLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI-- 138
Query: 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVA 665
L +LH P I+HRD+ +NI + + + D G A L +S V
Sbjct: 139 ----LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAVI 191
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GT + APE Y E DVY+FG LE +P
Sbjct: 192 GTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 479 VFSIWNYDGRIAFEDIIKATED-----FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKL- 531
VF IW + + ++ D +DI +GTG +G V++ + G A K +
Sbjct: 30 VFDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 85
Query: 532 --HRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL 589
H ++ E + + E +S + H +V L+ M +IY++M G LF +
Sbjct: 86 TPHESDKE------TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 139
Query: 590 RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL--EAFVAD 647
+++ + D V ++ V L ++H + + VH D+ NI+ +K E + D
Sbjct: 140 ADEHNKMSEDEA--VEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLID 194
Query: 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
FG LD S + + GT + APE+A V D++S GV++ +L G P
Sbjct: 195 FGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKVV-ALKKLHRAETEETTFFNSFQNEAHVLSK-IAH 557
DF IG G +G V A+ +V A+K L + + +E +VL K + H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+V L+ ++ + Y+ G LF L+ E L+ R + +A+AL YL
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAE-IASALGYL 155
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +IV+RD+ NILL+S+ + DFG + +S + GT Y+APE+ +
Sbjct: 156 H---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + G V E+L G P
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ L+ +A L + + +IK +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALT-GIPLPLIKSYLFQLL 116
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 38/233 (16%)
Query: 495 IKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
++ DF+ +G G +G V KA+ + + A+KK+ E + +T + E +L+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVXLLA 57
Query: 554 KIAHRNIVKLYGFCLHKK-------------CMFLIYKYMKRGSLFCFLRNDYEAVVLDW 600
+ H+ +V+ Y L ++ +F+ +Y + +L+ + ++ D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR-------- 652
R + + + ALSY+H I+HR++ NI ++ + DFG A+
Sbjct: 118 YWR--LFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 653 -LLDSD-----SSNRTIVAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVL 698
LDS S N T GT Y+A E L T EK D YS G++ E +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 46/287 (16%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 94
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-----EAVVLDWTMRVNIIKC- 609
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 610 --VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVA 665
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLI 722
++APE + V T + DV+SFGV+ E+ +PG + I
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKI 256
Query: 723 DVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
D R RM D + L C H +P RPT + +
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI 555
+ E+F IG G YG VYKA+ G+VVALKK+ R +TE ++ E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VA 611
H NIVKL + ++L+++++ L+ +A L + + +IK +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALT-GIPLPLIKSYLFQLL 114
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
L++ H ++HRD+ N+L+N++ +ADFG AR T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGR--HPGE 705
APE L + D++S G + E++ R PG+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 493 DIIKATEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHV 551
D+ ED+++ IG G +G V + + KV A+K L + E + + F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
++ +V+L+ + ++++ +YM G L + N Y+ V W R + V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD-VPEKWA-RFYTAEVVL 184
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-GTYGY 670
AL +H +HRD+ +N+LL+ +ADFGT ++ + R A GT Y
Sbjct: 185 -ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 671 IAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHP 703
I+PE+ + +CD +S GV E+L+G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 48/232 (20%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHV--LSKIA 556
DF IG+GG+G V+KA+ +GK ++++ +N+ + E V L+K+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---------YNNEKAEREVKALAKLD 63
Query: 557 HRNIVKLYGFCL------------------------------HKKCMFLIYKYMKRGSLF 586
H NIV Y C KC+F+ ++ +G+L
Sbjct: 64 HVNIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 587 CFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646
++ LD + + + + + + Y+H ++HRD+ +NI L + +
Sbjct: 123 QWIEK-RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
DFG L +D RT GT Y++PE + ++ D+Y+ G++ E+L
Sbjct: 179 DFGLVTSLKND-GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 493 DIIKATEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHV 551
D+ ED+++ IG G +G V + + KV A+K L + E + + F E +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
++ +V+L+ + ++++ +YM G L + N Y+ V W R + V
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD-VPEKWA-RFYTAEVVL 179
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-GTYGY 670
AL +H +HRD+ +N+LL+ +ADFGT ++ + R A GT Y
Sbjct: 180 -ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 671 IAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHP 703
I+PE+ + +CD +S GV E+L+G P
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ ++ IG G + V A+ + G+ VA+K + + + T+ F+ E ++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
NIVKL+ +K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCH 131
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
IVHRD+ + N+LL+ + +ADFG + + T G+ Y APEL
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQG 187
Query: 679 MVVT-EKCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 8 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 64
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA- 556
+DFD+ IG G Y V +L ++ A++ + + + + Q E HV + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANA 613
H +V L+ + +F + +Y+ G L ++ E ++ +++ A
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------A 165
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAP 673
L+YLH I++RD+ +N+LL+S+ + D+G + + GT YIAP
Sbjct: 166 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ D ++ GV+ E++ GR P
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 493 DIIKATEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHV 551
D+ ED+++ IG G +G V + + KV A+K L + E + + F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
++ +V+L+ + ++++ +YM G L + N Y+ V W R + V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD-VPEKWA-RFYTAEVVL 184
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA-GTYGY 670
AL +H +HRD+ +N+LL+ +ADFGT ++ + R A GT Y
Sbjct: 185 -ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 671 IAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHP 703
I+PE+ + +CD +S GV E+L+G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 66/300 (22%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR---------------NDYEAVVLDWTM 602
+NI+ L G C +++I +Y +G+L +L+ N E +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS----- 148
Query: 603 RVNIIKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+++ C VA + YL +HRD+++ N+L+ +ADFG AR +
Sbjct: 149 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDX 205
Query: 660 NRTIVAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXX 714
+ G ++APE + + T + DV+SFGV+ E+ +PG
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------- 258
Query: 715 XDQKIMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+++ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 259 --EELFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 306
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQ-NEAHVLSKIAHRNIVKLY 564
IG G YG V+K + G++VA+KK E+E+ E +L ++ H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH-HDCMP 623
K+ + L+++Y L R Y+ V + ++ +I A+++ H H+C
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVK-SITWQTLQAVNFCHKHNC-- 123
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-TMVVT 682
+HRD+ NIL+ + DFG ARLL S T Y +PEL
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 683 EKCDVYSFGVVALEVLMG 700
DV++ G V E+L G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 501 FDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+++K +GTGG+G V + G+ VA+K+ + + + + E ++ K+ H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 74
Query: 560 IVKLYGF--CLHK----KCMFLIYKYMKRGSLFCFLRNDYEAV--VLDWTMRVNIIKCVA 611
+V L K L +Y + G L +L N +E + + +R ++ ++
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRT-LLSDIS 132
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLN---SKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
+AL YLH + I+HRD+ NI+L +L + D G A+ LD V GT
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTL 188
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APEL T D +SFG +A E + G P
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 501 FDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+++K +GTGG+G V + G+ VA+K+ + + + + E ++ K+ H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 73
Query: 560 IVKLYGF--CLHK----KCMFLIYKYMKRGSLFCFLRNDYEAV--VLDWTMRVNIIKCVA 611
+V L K L +Y + G L +L N +E + + +R ++ ++
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRT-LLSDIS 131
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLN---SKLEAFVADFGTARLLDSDSSNRTIVAGTY 668
+AL YLH + I+HRD+ NI+L +L + D G A+ LD V GT
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTL 187
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APEL T D +SFG +A E + G P
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA+K + + + ++ F+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ + +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 19/230 (8%)
Query: 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALK---KLHRAETEETTFFNSFQN 547
ED++ + +G G +GSV + L +LK K + + F +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCM-----FLIYKYMKRGSLFCFL---RNDYEAVVLD 599
EA + +H N+++L G C+ +I +MK G L +L R + +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 600 WTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
+ + +A + YL + + +HRD+++ N +L + VADFG ++ + S
Sbjct: 146 LQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 660 NRT--IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPG 704
R I +IA E V T K DV++FGV E+ M +PG
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVY-------KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+G G +GSV K Q+ V + +A+TEE EA ++ ++ +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM------REAQIMHQLDNPY 71
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
IV+L G C + + L+ + G L FL E + + + ++ V+ + YL
Sbjct: 72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEE 128
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI-VAGTY--GYIAPELA 676
+ VHRD+++ N+LL ++ A ++DFG ++ L +D S T AG + + APE
Sbjct: 129 K---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 677 YTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+ + DV+S+GV E L G+ P
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF++ +G G +G V+ A+ + A+K L + E VLS +A
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAW 76
Query: 558 RNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
+ + FC K+ +F + +Y+ G L +++ ++ D + + L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQ 133
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR--LLDSDSSNRTIVAGTYGYIAP 673
+LH IV+RD+ +NILL+ +ADFG + +L +N GT YIAP
Sbjct: 134 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE--FCGTPDYIAP 188
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ D +SFGV+ E+L+G+ P
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA+K + + + ++ F+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ + +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 134
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ L+++ ++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-RRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 301
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 302 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 347
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 73
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 503 IKYCIGTGGYGSV-----YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
I+ +G G +G V YK Q + VALK + R +++ + E L + H
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+I+KLY + ++ +Y G LF ++ + I C A+ Y
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIIC---AIEYC 124
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H IVHRD+ N+LL+ L +ADFG + ++ +D + G+ Y APE+
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVIN 180
Query: 678 -TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + DV+S G+V +L+GR P
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + G+ VA+K + + + T+ F+ E ++ + H NIVKL+
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 80
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV----NIIKCVANALSYLHHD 620
+K ++LI +Y G +F +L V M+ + + + +A+ Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYL-------VAHGRMKEKEARSKFRQIVSAVQYCHQ- 132
Query: 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-------YIAP 673
IVHRD+ + N+LL++ + +ADFG SN V G Y AP
Sbjct: 133 --KRIVHRDLKAENLLLDADMNIKIADFGF--------SNEFTVGGKLDAFCGAPPYAAP 182
Query: 674 ELAYTMVVT-EKCDVYSFGVVALEVLMGRHP 703
EL + DV+S GV+ ++ G P
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 498 TEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+ DF +K +G G YG V A P G++VA+KK+ ++ F E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFK 67
Query: 557 HRNIVKLYGFCLHKKC-----MFLIYKYMK----RGSLFCFLRNDYEAVVLDWTMRVNII 607
H NI+ ++ +++I + M+ R L +D+ + T+R
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---- 123
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG- 666
A+ LH +++HRD+ +N+L+NS + V DFG AR++D +++ + G
Sbjct: 124 -----AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 667 ---------TYGYIAPELAYTMVVTEKC-DVYSFGVVALEVLMGR 701
T Y APE+ T + DV+S G + E+ + R
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 71 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 126
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 127 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 498 TEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+ DF +K +G G YG V A P G++VA+KK+ ++ F E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFK 67
Query: 557 HRNIVKLYGFCLHKKC-----MFLIYKYMK----RGSLFCFLRNDYEAVVLDWTMRVNII 607
H NI+ ++ +++I + M+ R L +D+ + T+R
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---- 123
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG- 666
A+ LH +++HRD+ +N+L+NS + V DFG AR++D +++ + G
Sbjct: 124 -----AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 667 ---------TYGYIAPELAYTMVVTEKC-DVYSFGVVALEVLMGR 701
T Y APE+ T + DV+S G + E+ + R
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 117
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGK 173
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 498 TEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+ DF +K +G G YG V A P G++VA+KK+ ++ F E +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFK 67
Query: 557 HRNIVKLYGFCLHKKC-----MFLIYKYMK----RGSLFCFLRNDYEAVVLDWTMRVNII 607
H NI+ ++ +++I + M+ R L +D+ + T+R
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---- 123
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG- 666
A+ LH +++HRD+ +N+L+NS + V DFG AR++D +++ + G
Sbjct: 124 -----AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 667 ---------TYGYIAPELAYTMVVTEKC-DVYSFGVVALEVLMGR 701
T Y APE+ T + DV+S G + E+ + R
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSL-------------FCFLRNDYEAVVLDWTMRV 604
+NI+ L G C +++I +Y +G+L +C+ + L V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
+ VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 665 AGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQKI 719
G ++APE + + T + DV+SFGV+ E+ +PG +++
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EEL 261
Query: 720 MLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 306
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 78
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSL-------------FCFLRNDYEAVVLDWTMRV 604
+NI+ L G C +++I +Y +G+L +C+ + L V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664
+ VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 665 AGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQKI 719
G ++APE + + T + DV+SFGV+ E+ +PG +++
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EEL 246
Query: 720 MLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 247 FKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 39/235 (16%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQN-EAHVLSKIAHRNIVKLY 564
IG G +G VY+A+L +G++VA+KK+ + + +F+N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK--------AFKNRELQIMRKLDHCNIVRLR 79
Query: 565 GFCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANAL 614
F KK + L+ Y+ +++ R+ A T+ V +K + +L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSL 135
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAP 673
+Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y AP
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 191
Query: 674 ELAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
EL + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 69 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 124
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 125 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DFD +G G +G V + G+ A+K L + E+ VL H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSR--ERVFTEERARFYGAEIVS-ALEYL 121
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +V+RDI N++L+ + DFG + SD + GT Y+APE+
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++I +G G +G VYKA+ N + AL ET+ + E +L+ H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHP 68
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA----NAL 614
IVKL G H ++++ ++ G++ + + LD + I+ V AL
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEAL 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++LH I+HRD+ + N+L+ + + +ADFG + R GT ++APE
Sbjct: 123 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 675 LAYTMVVTE-----KCDVYSFGVVALEVLMGRHP 703
+ + + K D++S G+ +E+ P
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 21/237 (8%)
Query: 501 FDIKYCIGTGGYGSVY---KAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
F++ +G G +G V+ K P+ G + A+K L +A + + + E +L+ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 557 HRNIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H +VKL Y F K ++LI +++ G LF L E + + ++ + + +A L
Sbjct: 89 HPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE-LALGLD 144
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH I++RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 145 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPP 732
+ D +S+GV+ E+L G P + D+K + +L ++L P
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQ--------GKDRKETMTLILKAKLGMP 250
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 480 FSIWNYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAE 535
F + YD + F E+ + +G+G +G V A G + + E
Sbjct: 31 FREYEYDLKWEF-----PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE 85
Query: 536 TEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE 594
+++ + +E +++++ +H NIV L G C ++LI++Y G L +LR+ E
Sbjct: 86 KADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKRE 145
Query: 595 AVVLDWTMRVNIIKC--------------------VANALSYLHHDCMPSIVHRDISSNN 634
D N + VA + +L S VHRD+++ N
Sbjct: 146 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARN 202
Query: 635 ILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT----YGYIAPELAYTMVVTEKCDVYSF 690
+L+ + DFG AR + SDS+ +V G ++APE + + T K DV+S+
Sbjct: 203 VLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 691 GVVALEVL-MGRHP 703
G++ E+ +G +P
Sbjct: 261 GILLWEIFSLGVNP 274
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA++ + + + ++ F+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ + +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 93
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY------EAVVLDWTMRVNIIKC 609
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I C
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI-C 152
Query: 610 ----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTI 663
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIM 720
++APE + V T + DV+SFGV+ E+ +PG +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------V 254
Query: 721 LIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
ID R RM D + L C H +P RPT + +
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLSKI 555
DF+ C+G GG+G V++A+ KV A+K++ E E L+K+
Sbjct: 6 DFEPIQCLGRGGFGVVFEAK---NKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKL 60
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDW------------TMR 603
H IV+ + L K + + L+ ++ + + DW ++
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 604 VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
++I +A A+ +LH ++HRD+ +NI V DFG +D D +T+
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 664 VA------------GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ GT Y++PE + + K D++S G++ E+L
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 547 NEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
E +L K++ H NI++L FL++ MK+G LF +L E V L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRK 128
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
I++ + + LH +IVHRD+ NILL+ + + DFG + LD R+ V
Sbjct: 129 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-VC 184
Query: 666 GTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMGRHP 703
GT Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 82
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ L+++ ++
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-RRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 249
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 250 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 295
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 547 NEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
E +L K++ H NI++L FL++ MK+G LF +L E V L
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRK 115
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
I++ + + LH +IVHRD+ NILL+ + + DFG + LD R V
Sbjct: 116 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VC 171
Query: 666 GTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMGRHP 703
GT Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G +G VYK L + VA+K L + E F++EA + +++ H N+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFL-----RNDYEAVVLDWTMR--------VNII 607
V L G + + +I+ Y G L FL +D + D T++ V+++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 608 KCVANALSYL--HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
+A + YL HH +VH+D+++ N+L+ KL ++D G R + + + +
Sbjct: 152 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 666 G--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
++APE + D++S+GVV EV
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 79
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR------ 603
V+ + ++V+L G + +I + M RG L +LR+ A+ + +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 604 -VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 92
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 151
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 253
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 507 IGTGGYGSVY-------KAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+G G +GSV K Q+ V + +A+TEE EA ++ ++ +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE------MMREAQIMHQLDNPY 397
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
IV+L G C + + L+ + G L FL E + + + ++ V+ + YL
Sbjct: 398 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEE 454
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI-VAGTY--GYIAPELA 676
+ VHR++++ N+LL ++ A ++DFG ++ L +D S T AG + + APE
Sbjct: 455 K---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 677 YTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+ + DV+S+GV E L G+ P
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 99
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 100 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 153
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 667 TYGYIAPELAYTMV------VTEKCDVYSFGVVALEV 697
T Y+APE+ + ++ D+Y+ G+V E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 85
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ L+++ ++
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-RRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 252
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 253 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 298
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA+K + + + ++ F+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ + +ADFG + + + G Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E ++I +G G +G VYKA+ N + AL ET+ + E +L+ H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHP 76
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA----NAL 614
IVKL G H ++++ ++ G++ + + LD + I+ V AL
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEAL 130
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++LH I+HRD+ + N+L+ + + +ADFG + R GT ++APE
Sbjct: 131 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 675 LAYTMVVTE-----KCDVYSFGVVALEV 697
+ + + K D++S G+ +E+
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 39/235 (16%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQN-EAHVLSKIAHRNIVKLY 564
IG G +G VY+A+L +G++VA+KK+ + + +F+N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK--------AFKNRELQIMRKLDHCNIVRLR 79
Query: 565 GFCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANAL 614
F KK + L+ Y+ +++ R+ A T+ V +K + +L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSL 135
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAP 673
+Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y AP
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAP 191
Query: 674 ELAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
EL + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 507 IGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G + V + Q K++ KKL + ++ + EA + + H NI
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK------LEREARICRLLKHPNI 83
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD 620
V+L+ + +LI+ + G LF + V ++ + C+ L + H
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 621 CMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
+VHRD+ N+LL SKL+ +ADFG A ++ + AGT GY++PE+
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ D+++ GV+ +L+G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 39/235 (16%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQN-EAHVLSKIAHRNIVKLY 564
IG G +G VY+A+L +G++VA+KK+ + + +F+N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK--------AFKNRELQIMRKLDHCNIVRLR 79
Query: 565 GFCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANAL 614
F KK + L+ Y+ +++ R+ A T+ V +K + +L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSL 135
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAP 673
+Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y AP
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAP 191
Query: 674 ELAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
EL + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
H NIVKL+ + FL+ + + G LF ++ T I++ + +A+S
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVS 120
Query: 616 YLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
++H +VHRD+ N+L N LE + DFG ARL D+ T Y A
Sbjct: 121 HMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PEL E CD++S GV+ +L G+ P
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ L+++ ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-RRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 260
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 507 IGTGGYGSVYKAQL-------PNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIA-H 557
+G G +G V A+ PN VA+K L TE+ + +E ++ I H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 86
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR-----------VNI 606
+NI+ L G C +++I +Y +G+L +L+ L+++ ++
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQA-RRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 607 IKC---VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
+ C VA + YL +HRD+++ N+L+ +ADFG AR + +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 664 VAGT--YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQK 718
G ++APE + + T + DV+SFGV+ E+ +PG ++
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---------EE 253
Query: 719 IMLIDVLDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769
+ + R+ P + M+M+D C H+ P RPT +++ ++
Sbjct: 254 LFKLLKEGHRMDKPSNCTNELYMMMRD----------CWHAVPSQRPTFKQLVEDL 299
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 92
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 151
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 253
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 18/215 (8%)
Query: 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLS 553
ED+D+ +G G G V QL +V VA+K + + + + E +
Sbjct: 5 VEDWDLVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINK 59
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
+ H N+VK YG +L +Y G LF + D D +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAG 116
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI--VAGTYGYI 671
+ YLH I HRDI N+LL+ + ++DFG A + ++ R + + GT Y+
Sbjct: 117 VVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 672 APE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
APE L E DV+S G+V +L G P +
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 38/215 (17%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566
IG G YG V+ + G+ VA+K TEE ++F + VL + H NI+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFF--TTEEASWFRETEIYQTVLMR--HENILGFIAA 99
Query: 567 CLHKKC----MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ ++LI Y + GSL+ +L+ + LD + + + L +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 623 -----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI----VAGTYGYIAP 673
P+I HRD+ S NIL+ +AD G A SD++ I GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 674 EL-----------AYTMVVTEKCDVYSFGVVALEV 697
E+ +Y M D+YSFG++ EV
Sbjct: 216 EVLDESLNRNHFQSYIMA-----DMYSFGLILWEV 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 13 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 69
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLD-------WTM 602
V+ + ++V+L G + +I + M RG L +LR+ A+ + +
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 83
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 142
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 244
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 437 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 489
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 547
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL-- 563
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 80
Query: 564 --YGFCLHKKCMFL--IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
Y K ++L + Y+ +++ R+ A T+ V +K + +L+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 507 IGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G +G VYK L + VA+K L + E F++EA + +++ H N+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFL-----RNDYEAVVLDWTMR--------VNII 607
V L G + + +I+ Y G L FL +D + D T++ V+++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 608 KCVANALSYL--HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
+A + YL HH +VH+D+++ N+L+ KL ++D G R + + + +
Sbjct: 135 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 666 G--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
++APE + D++S+GVV EV
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 33 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 86
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 87 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 140
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 667 TYGYIAPELAYTMVVT------EKCDVYSFGVVALEV 697
T Y+APE+ + ++ D+Y+ G+V E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 490
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 548
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
EDF + +G G +G V+ A+ + A+K L + E VLS +A
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAW 75
Query: 558 RNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
+ + FC K+ +F + +Y+ G L +++ ++ D + + L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQ 132
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH IV+RD+ +NILL+ +ADFG + + GT YIAPE+
Sbjct: 133 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D +SFGV+ E+L+G+ P
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 129
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 188
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 290
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 291 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 340
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 83
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 142
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 244
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 84
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 141 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 196
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 243
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 122
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 123 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 178
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 145
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 146 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 201
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 547 NEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
E +L K++ H NI++L FL++ MK+G LF +L E V L
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRK 128
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
I++ + + LH +IVHRD+ NILL+ + + DFG + LD R V
Sbjct: 129 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VC 184
Query: 666 GTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMGRHP 703
GT Y+APE+ + ++ D++S GV+ +L G P
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 117
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 173
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 88
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 144
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 145 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 200
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 247
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 99
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 155
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 156 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 211
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 258
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 117
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 173
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 80
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 120
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 121 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 176
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 81
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 137
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 193
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 240
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 92
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 148
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 251
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 92
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 151
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 253
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 94
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI- 153
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 255
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 256 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 305
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 80
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 192
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 93
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 149
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 150 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 205
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 252
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 131
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--XYKAQTHGKWPVKWYAPECINYY 189
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 159
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 215
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 216 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 271
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 80
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 85
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 141
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 197
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 244
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 114
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 170
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 226
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 273
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 118
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 174
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 175 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 230
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 277
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 79
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 92
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 148
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 251
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 66
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 83
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 142
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 244
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 72
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
E ++ CIG G +G V++ P +A+ + F EA + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H +IVKL G + + +++I + G L FL+ LD + ++ AL+Y
Sbjct: 67 HPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAY 123
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY--GYIAPE 674
L VHRDI++ N+L++S + DFG +R ++ DS+ G ++APE
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 179
Query: 675 LAYTMVVTEKCDVYSFGVVALEVLM 699
T DV+ FGV E+LM
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILM 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 119
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 120 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 175
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 116
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 172
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 173 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 228
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 275
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 13 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 66
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 67 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 120
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 667 TYGYIAPEL---AYTMVVTE---KCDVYSFGVVALEV 697
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 108
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 164
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 165 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 220
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA++ + + + ++ F+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + R + V+ A+ Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 14 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 70
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 37/234 (15%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G VY+A+L +G++VA+KK+ ++ F N E ++ K+ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRLRY 114
Query: 566 FCL---HKK---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKC----VANALS 615
F KK + L+ Y+ +++ R+ A T+ V +K + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLA 170
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
Y+H I HRDI N+LL+ + DFG+A+ L N + + Y Y APE
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 226
Query: 675 LAYTMV-VTEKCDVYSFGVVALEVLMGR--HPGEXXXXXXXXXXDQKIMLIDVL 725
L + T DV+S G V E+L+G+ PG+ DQ + +I VL
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD-------SGVDQLVEIIKVL 273
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 50/290 (17%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-N 559
+G G +G V +A + + VA+K L T + +E +L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE--HRALMSELKILIHIGHHLN 83
Query: 560 IVKLYGFCLHKKC-MFLIYKYMKRGSLFCFLR---NDY-------EAVVLDWTMRVNIIK 608
+V L G C + +I ++ K G+L +LR N++ E + D+ ++I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI- 142
Query: 609 C----VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRT 662
C VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKI 719
++APE + V T + DV+SFGV+ E+ +PG
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG--------------- 244
Query: 720 MLIDVLDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
+ ID R RM D + L C H +P RPT + +
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 145
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 203
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 147
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 205
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 147
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 205
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 8 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 61
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 62 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 115
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 667 TYGYIAPEL---AYTMVVTE---KCDVYSFGVVALEV 697
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A +G+ VA+KKL R E F E +L + H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 108
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
+ Y + + F++ D + ++ I V L L + +
Sbjct: 109 VFTPASSLRNFYDFY---LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEK 684
VHRD+ N+ +N E + DFG AR D++ + + T Y APE+ + M +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV---TRWYRAPEVILSWMHYNQT 222
Query: 685 CDVYSFGVVALEVLMGR 701
D++S G + E+L G+
Sbjct: 223 VDIWSVGCIMAEMLTGK 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 72
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 73
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 60
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 61 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 114
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 667 TYGYIAPEL---AYTMVVTE---KCDVYSFGVVALEV 697
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
++ IG G +G V++ + G+ VA+K + EE ++F + E + + H NI+
Sbjct: 10 LQESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR--EAEIYQTVMLRHENIL- 63
Query: 563 LYGFCLHKK-------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS 615
GF ++L+ Y + GSLF +L N Y V + + A+ L+
Sbjct: 64 --GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV---EGMIKLALSTASGLA 117
Query: 616 YLHHDCM-----PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV----AG 666
+LH + + P+I HRD+ S NIL+ +AD G A DS + I G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 667 TYGYIAPEL---AYTMVVTE---KCDVYSFGVVALEV 697
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 137
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 195
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 507 IGTGGYGSV----YKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G V Y + N G+ VA+K L + E+ + E +L + H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESG-GNHIADLKKEIEILRNLYHENIV 86
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + LI +++ GSL +L + + L ++ + C + YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC--KGMDYLGS 144
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
VHRD+++ N+L+ S+ + + DFG + +++D T+ + APE
Sbjct: 145 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 202 MQSKFYIASDVWSFGVTLHELL 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 125
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 183
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 131
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 189
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 497
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L++S + DFG +R ++ DS+ G
Sbjct: 498 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 553
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 45 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 101
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N ++ + DFG R + R
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ I +G G +G V A G+ VALK +++ ++ + E L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+I+KLY K + ++ +Y ++ D + + + +A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 120
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAY 677
IVHRD+ N+LL+ L +ADFG + ++ +D + G+ Y APE ++
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 176
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + DV+S GV+ +L R P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ I +G G +G V A G+ VALK +++ ++ + E L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+I+KLY K + ++ +Y ++ D + + + +A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 124
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAY 677
IVHRD+ N+LL+ L +ADFG + ++ +D + G+ Y APE ++
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 180
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + DV+S GV+ +L R P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 117
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L+++ + DFG +R ++ DS+ G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGK 173
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 498 TEDFDIKYCIGTGGYGSVYK------AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV 551
TE++ + +G G + V + Q ++ KKL + ++ + EA +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK------LEREARI 63
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+L+ + +LI+ + G LF + V ++ + C+
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQ 117
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTY 668
L + H +VHR++ N+LL SKL+ +ADFG A ++ + AGT
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 507 IGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
+G+G +G+V K Q+ K+ + E + + EA+V+ ++ + IV++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G C + M L+ + + G L +L+ + V D + + ++ V+ + YL +
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNI-IELVHQVSMGMKYLEES---N 127
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG-----YIAPELAYTM 679
VHRD+++ N+LL ++ A ++DFG ++ L +D + A T+G + APE
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 185
Query: 680 VVTEKCDVYSFGVVALEVL-MGRHP 703
+ K DV+SFGV+ E G+ P
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 507 IGTGGYGSV----YKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G V Y + N G+ VA+K L + E+ + E +L + H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESG-GNHIADLKKEIEILRNLYHENIV 74
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + LI +++ GSL +L + + L ++ + C + YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC--KGMDYLGS 132
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG---YIAPELA 676
VHRD+++ N+L+ S+ + + DFG + +++D T+ + APE
Sbjct: 133 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 190 MQSKFYIASDVWSFGVTLHELL 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ I +G G +G V A G+ VALK +++ ++ + E L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+I+KLY K + ++ +Y ++ D + + + +A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 130
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAY 677
IVHRD+ N+LL+ L +ADFG + ++ +D + G+ Y APE ++
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 186
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + DV+S GV+ +L R P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS--FQNEAHVLSK 554
A ED + +G G +G VY+ N K + + ++ T N F +EA ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
+ H +IVKL G + ++ ++I + G L +L RN VL T+ + ++ + A
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKA 137
Query: 614 LSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYI 671
++YL +C VHRDI+ NIL+ S + DFG +R + D D ++ ++
Sbjct: 138 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 193
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+PE T DV+ F V E+L G+ P
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAE-TEETTFFNSFQNEAHVLS 553
E+F++ +GTG YG V+ + GK+ A+K L +A ++ + E VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 554 KIAHRN-IVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
I +V L Y F K + LI Y+ G LF L + + V I
Sbjct: 114 HIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL-- 170
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI-VAGTYGY 670
AL +LH I++RDI NILL+S + DFG ++ +D + R GT Y
Sbjct: 171 -ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 671 IAPELAY--TMVVTEKCDVYSFGVVALEVLMGRHP 703
+AP++ + D +S GV+ E+L G P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 500 DFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
++ I +G G +G V A G+ VALK +++ ++ + E L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+I+KLY K + ++ +Y ++ D + + + +A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 129
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAY 677
IVHRD+ N+LL+ L +ADFG + ++ +D + G+ Y APE ++
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 185
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + DV+S GV+ +L R P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G Y +VYK G VALK++ + ++EE T + + E ++ ++ H NIV+LY
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIR-EISLMKELKHENIVRLYD 70
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR---VNIIKCVA----NALSYLH 618
+ + L++++M L+ ++ + T R +N++K L++ H
Sbjct: 71 VIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAY 677
+ I+HRD+ N+L+N + + + DFG AR + + T Y AP+ L
Sbjct: 126 EN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 678 TMVVTEKCDVYSFGVVALEVLMGR 701
+ + D++S G + E++ G+
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A +G+ VA+KKL R E F E +L + H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 90
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
+ Y + + F++ D + ++ I V L L + +
Sbjct: 91 VFTPASSLRNFYDFY---LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEK 684
VHRD+ N+ +N E + DFG AR D++ + + T Y APE+ + M +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV---TRWYRAPEVILSWMHYNQT 204
Query: 685 CDVYSFGVVALEVLMGR 701
D++S G + E+L G+
Sbjct: 205 VDIWSVGCIMAEMLTGK 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKV-------VALKKLHRAETEETTFFNSFQNEA 549
A E + +G G +G VY+ + G V VA+K ++ A + F NEA
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 66
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTM 602
V+ + ++V+L G + +I + M RG L +LR N+ +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662
+ + +A+ ++YL+ + VHRD+++ N + + DFG R + R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 663 IVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697
G +++PE V T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS--FQNEAHVLSK 554
A ED + +G G +G VY+ N K + + ++ T N F +EA ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
+ H +IVKL G + ++ ++I + G L +L RN VL T+ + ++ + A
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKA 125
Query: 614 LSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYI 671
++YL +C VHRDI+ NIL+ S + DFG +R + D D ++ ++
Sbjct: 126 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+PE T DV+ F V E+L G+ P
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS--FQNEAHVLSK 554
A ED + +G G +G VY+ N K + + ++ T N F +EA ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANA 613
+ H +IVKL G + ++ ++I + G L +L RN VL T+ + ++ + A
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKA 121
Query: 614 LSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYGYI 671
++YL +C VHRDI+ NIL+ S + DFG +R + D D ++ ++
Sbjct: 122 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 177
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVL-MGRHP 703
+PE T DV+ F V E+L G+ P
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 507 IGTGGYGSVYKA----QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK 562
IG G +G VY Q N A+K L R E +F E ++ + H N++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 563 LYGFCLHKKCM-FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC 621
L G L + + ++ YM G L F+R+ + + + VA + YL
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYL---A 141
Query: 622 MPSIVHRDISSNNILLNSKLEAFVADFGTAR-LLDSDS---SNRTIVAGTYGYIAPELAY 677
VHRD+++ N +L+ VADFG AR +LD + + A E
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 678 TMVVTEKCDVYSFGVVALEVL 698
T T K DV+SFGV+ E+L
Sbjct: 202 TYRFTTKSDVWSFGVLLWELL 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 497 ATEDFDIKY-------CIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQN 547
+T D++I+ CIG G +G V++ P +A+ + F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
EA + + H +IVKL G + + +++I + G L FL+ LD +
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 497
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGT 667
++ AL+YL VHRDI++ N+L+++ + DFG +R ++ DS+ G
Sbjct: 498 YQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGK 553
Query: 668 Y--GYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699
++APE T DV+ FGV E+LM
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKL----HRAETEETTFFNSFQNEAHVLSKIA 556
+G G +G V +A + VA+K L H E E + +E VLS +
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE------ALMSELKVLSYLG 100
Query: 557 -HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT-------------- 601
H NIV L G C +I +Y G L FLR ++ + T
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 602 -MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
++ VA +++L + +HRD+++ NILL + DFG AR + +DS+
Sbjct: 161 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 216
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
+V G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 217 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPV 269
Query: 716 DQKIM-LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
D K +I LSP M DI+ C + P RPT +++ Q
Sbjct: 270 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKT------CWDADPLKRPTFKQIVQ 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKL----HRAETEETTFFNSFQNEAHVLSKIA 556
+G G +G V +A + VA+K L H E E + +E VLS +
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE------ALMSELKVLSYLG 84
Query: 557 -HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT-------------- 601
H NIV L G C +I +Y G L FLR ++ + T
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 602 -MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
++ VA +++L + +HRD+++ NILL + DFG AR + +DS+
Sbjct: 145 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 200
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
+V G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 201 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPV 253
Query: 716 DQKIM-LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
D K +I LSP M DI+ C + P RPT +++ Q
Sbjct: 254 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKT------CWDADPLKRPTFKQIVQ 300
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 507 IGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YGSV K P+G+++A+K++ R+ +E + V+ IV+ YG
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV--VLDWTMRVNIIKCVANALSYLHHDCMP 623
+ ++ + M S F + Y + V+ + I AL++L +
Sbjct: 89 ALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL-- 145
Query: 624 SIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPEL----AYT 678
I+HRDI +NILL+ + DFG + +L+DS + R AG Y+APE A
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD--AGCRPYMAPERIDPSASR 203
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHP 703
+ DV+S G+ E+ GR P
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKL----HRAETEETTFFNSFQNEAHVLSKIA 556
+G G +G V +A + VA+K L H E E + +E VLS +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE------ALMSELKVLSYLG 107
Query: 557 -HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT-------------- 601
H NIV L G C +I +Y G L FLR ++ + T
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 602 -MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
++ VA +++L + +HRD+++ NILL + DFG AR + +DS+
Sbjct: 168 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN- 223
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
+V G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 224 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPV 276
Query: 716 DQKIM-LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
D K +I LSP M DI+ C + P RPT +++ Q
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKT------CWDADPLKRPTFKQIVQ 323
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKL----HRAETEETTFFNSFQNEAHVLSKIA 556
+G G +G V +A + VA+K L H E E + +E VLS +
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE------ALMSELKVLSYLG 102
Query: 557 -HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT-------------- 601
H NIV L G C +I +Y G L FLR ++ + T
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 602 -MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
++ VA +++L + +HRD+++ NILL + DFG AR + +DS+
Sbjct: 163 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 218
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
+V G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 219 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPV 271
Query: 716 DQKIM-LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
D K +I LSP M DI+ C + P RPT +++ Q
Sbjct: 272 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKT------CWDADPLKRPTFKQIVQ 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 507 IGTGGYGSVYKA------QLPNGKVVALKKL----HRAETEETTFFNSFQNEAHVLSKIA 556
+G G +G V +A + VA+K L H E E + +E VLS +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE------ALMSELKVLSYLG 107
Query: 557 -HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWT-------------- 601
H NIV L G C +I +Y G L FLR ++ + T
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 602 -MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
++ VA +++L + +HRD+++ NILL + DFG AR + +DS+
Sbjct: 168 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 223
Query: 661 RTIVAGT----YGYIAPELAYTMVVTEKCDVYSFGVVALEVL-MGRHPGEXXXXXXXXXX 715
+V G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 224 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPV 276
Query: 716 DQKIM-LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQ 767
D K +I LSP M DI+ C + P RPT +++ Q
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKT------CWDADPLKRPTFKQIVQ 323
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 499 EDFDIKY-CIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+ + + +G GG+G V+ Q+ GK+ A KKL++ ++ + E +L+K+
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-DYEAVVLDWTMRVNIIKCVANALS 615
R IV L K + L+ M G + + N D + + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH +I++RD+ N+LL+ ++D G A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 499 EDFDIKY-CIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+ + + +G GG+G V+ Q+ GK+ A KKL++ ++ + E +L+K+
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-DYEAVVLDWTMRVNIIKCVANALS 615
R IV L K + L+ M G + + N D + + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH +I++RD+ N+LL+ ++D G A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 506 CIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564
IG G + V A+ + GK VA+K + + + ++ F+ E + + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLF 79
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
+K ++L+ +Y G +F +L + + + + +A+ Y H
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK---FRQIVSAVQYCHQKF--- 133
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-E 683
IVHRD+ + N+LL++ +ADFG + + + G Y APEL
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 684 KCDVYSFGVVALEVLMGRHP 703
+ DV+S GV+ ++ G P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 499 EDFDIKY-CIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+ + + +G GG+G V+ Q+ GK+ A KKL++ ++ + E +L+K+
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-DYEAVVLDWTMRVNIIKCVANALS 615
R IV L K + L+ M G + + N D + + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH +I++RD+ N+LL+ ++D G A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 499 EDFDIKY-CIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA 556
ED+ + + +G GG+G V+ Q+ GK+ A KKL++ ++ + E +L+K+
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN-DYEAVVLDWTMRVNIIKCVANALS 615
R IV L K + L+ M G + + N D + + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+LH +I++RD+ N+LL+ ++D G A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 676 AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
F+++ +G G VY+ Q K ALK L + ++ + E VL +++H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV-----RTEIGVLLRLSHPN 109
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
I+KL + L+ + + G LF + E + +K + A++YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRI---VEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 620 DCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
+ IVHRD+ N+L + +ADFG +++++ +T V GT GY APE+
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEIL 222
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ D++S G++ +L G P
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI----- 560
+G G YG V K + +P+G+++A+K++ T + Q + I+ R +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIR------ATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA----NALSY 616
V YG + +++ + M SL F + + + T+ +I+ +A AL +
Sbjct: 113 VTFYGALFREGDVWICMELMDT-SLDKFYK---QVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
LH S++HRD+ +N+L+N+ + + DFG + L DS +TI AG Y+APE
Sbjct: 169 LHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAPERI 225
Query: 677 YTMVVTE----KCDVYSFGVVALEVLMGRHP 703
+ + K D++S G+ +E+ + R P
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YG+V A G VA+KKL+R E F E +L + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLKHMRHENVIGLLD 91
Query: 566 FCLHKKCM------FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN-IIKCVANALSYLH 618
+ + +L+ +M G+ L +E + D R+ ++ + L Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMK-HEKLGED---RIQFLVYQMLKGLRYIH 145
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678
I+HRD+ N+ +N E + DFG AR DS+ + T Y APE+
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV---TRWYRAPEVILN 199
Query: 679 -MVVTEKCDVYSFGVVALEVLMGR 701
M T+ D++S G + E++ G+
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+++ +G+G + V K Q GK A +KK + + + E ++L +I
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NI+ L+ +K + LI + + G LF FL + E++ D +K + + + Y
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHY 130
Query: 617 LHHDCMPSIVHRDISSNNILL------NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
LH I H D+ NI+L N +++ + DFG A +++ + + I GT +
Sbjct: 131 LHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEF 184
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+APE+ + + D++S GV+ +L G P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV--LSKIAHRNIVKLY 564
IG G YG+VYK L + + VA+K A + +F NE ++ + + H NI +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQ------NFINEKNIYRVPLMEHDNIAR-- 71
Query: 565 GFCLHKKCM--------FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
F + + + L+ +Y GSL +L DW + V L+Y
Sbjct: 72 -FIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 617 LHHDC------MPSIVHRDISSNNILLNSKLEAFVADFGTA------RLLDSDSSNRTIV 664
LH + P+I HRD++S N+L+ + ++DFG + RL+ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 665 A--GTYGYIAPELAYTMV-------VTEKCDVYSFGVVALEVLM 699
+ GT Y+APE+ V ++ D+Y+ G++ E+ M
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+++ +G+G + V K Q GK A +KK + + + E ++L +I
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NI+ L+ +K + LI + + G LF FL + E++ D +K + + + Y
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHY 123
Query: 617 LHHDCMPSIVHRDISSNNILL------NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
LH I H D+ NI+L N +++ + DFG A +++ + + I GT +
Sbjct: 124 LHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEF 177
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+APE+ + + D++S GV+ +L G P
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAHVLSKIA 556
+++ +G+G + V K Q GK A +KK + + E ++L +I
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H NI+ L+ +K + LI + + G LF FL + E++ D +K + + + Y
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHY 144
Query: 617 LHHDCMPSIVHRDISSNNILL------NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
LH I H D+ NI+L N +++ + DFG A +++ + + I GT +
Sbjct: 145 LHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEF 198
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+APE+ + + D++S GV+ +L G P
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 43/252 (17%)
Query: 472 GPTKS-GDVFSIWNYDGRIAFEDIIKATE----DFDIKYCIGTGGYGSVYKAQLPNGKVV 526
GP S D+ S NY I +K + D+ I + G + + + N K
Sbjct: 1 GPLGSMKDILS--NYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDN-KFY 57
Query: 527 ALKKLHRAETEETTFF--------------NSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572
ALKK ++ E+ F + F+NE +++ I + + G +
Sbjct: 58 ALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDE 117
Query: 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWT----MRVNIIKC----VANALSYLHHDCMPS 624
+++IY+YM+ S+ F D VLD + + +IKC V N+ SY+H++ +
Sbjct: 118 VYIIYEYMENDSILKF---DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KN 172
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA--GTYGYIAPEL--AYTMV 680
I HRD+ +NIL++ ++DFG + + ++ I GTY ++ PE +
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYM----VDKKIKGSRGTYEFMPPEFFSNESSY 228
Query: 681 VTEKCDVYSFGV 692
K D++S G+
Sbjct: 229 NGAKVDIWSLGI 240
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG+V+KA+ ++VALK++ R + ++ +S E +L ++ H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV--VLDWTMRVNIIKCVANALSYLHHDCMP 623
K + L++++ + L+ +++ LD + + + + L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR--- 120
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-TMVVT 682
+++HRD+ N+L+N E +ADFG AR + T Y P++ + + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 683 EKCDVYSFGVVALEVLMGRHP 703
D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 81
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 140 LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWY 193
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++L+ M L+ L+ ND+ L +R L
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHICYFLYQILR---------GLK 158
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 96
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 155 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 208
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 95
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 154 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 207
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 97 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 146
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 147 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 138
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 138
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 86
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 145 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 198
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 138
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 500 DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F I+ IG G + VY+A L +G VALKK+ + + E +L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRN--DYEAVVLDWTMRVNIIKCVANALSY 616
N++K Y + + ++ + G L +++ + ++ + T+ ++ + +AL +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ-LCSALEH 151
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
+H ++HRDI N+ + + + D G R S ++ + GT Y++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ K D++S G + E+ + P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 109 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 158
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 138
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G Y +VYK + +VALK++ R E EE + + E +L + H NIV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 67
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
+K + L+++Y+ + L +L +D ++ +++ + + + L+Y H +
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYL-DDCGNIINMHNVKLFLFQLL-RGLAYCHRQ---KV 121
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LAYTMVVTEK 684
+HRD+ N+L+N + E +ADFG AR + T Y P+ L + + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 685 CDVYSFGVVALEVLMGR 701
D++ G + E+ GR
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKCQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 138
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR----------PFQSIIH--AKRTYREL-RLLK 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWY 184
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 81
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 140 LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWY 193
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 184
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 94 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 143
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 144 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 95 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 144
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 145 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 86 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 135
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 136 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 96
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T Y
Sbjct: 155 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWY 208
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---XVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 82
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 194
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 87 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 137 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR----------PFQSIIH--AKRTYREL-RLLK 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 184
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 87 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 136
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 137 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 87
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 146 LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWY 199
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 99
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 158 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 211
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 78
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 137 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 190
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 95
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 154 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 207
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 96
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 155 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 208
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 81
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 140 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 193
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 78
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 137 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 190
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 75
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 134 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 187
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G G V+K + G V+A+K++ R+ +E + VL IV+ +G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHDCPYIVQCFG 91
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLD---WTMRVNIIKCVANALSYLHHDCM 622
+ +F+ + M G+ L+ + + + M V I+K AL YL
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVK----ALYYLKE--K 143
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELAYTMVV 681
++HRD+ +NILL+ + + + DFG + RL+D + +R+ AG Y+APE
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDP 201
Query: 682 TE-----KCDVYSFGVVALEVLMGRHP 703
T+ + DV+S G+ +E+ G+ P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 88
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 147 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 200
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 88
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 147 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 200
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 73
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 132 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 185
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 83
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 142 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 195
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 81
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 140 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 193
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV---AGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + + T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L + H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 94 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 143
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV---AGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + + T Y A
Sbjct: 144 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 78
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 137 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 190
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 87
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 146 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 199
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 82
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 141 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 194
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G YG VYKA + VA+K++ R E EE + E +L ++ HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV--NIIKCVANALSYLH-HDCM 622
H + LI++Y + +N D +MRV + + + N +++ H C+
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 623 PSIVHRDISSNNILLNSKLEA-----FVADFGTARLLDSDSSNRTIVAGTYGYIAPE-LA 676
HRD+ N+LL+ + + DFG AR T T Y PE L
Sbjct: 155 ----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILL 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLM 699
+ + D++S + E+LM
Sbjct: 211 GSRHYSTSVDIWSIACIWAEMLM 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 82
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 141 LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWY 194
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 74
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 133 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 186
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 78
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 137 LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWY 190
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPAFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 72
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 184
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 73
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + + T Y
Sbjct: 132 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWY 185
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 82
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 194
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 23/219 (10%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
E +I IG G +G VY + + L + R ++ +F+ E + H
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQ---LKAFKREVMAYRQTRHE 89
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH 618
N+V G C+ + +I K +L+ +R+ +VLD I + + + YLH
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR-----TIVAGTYGYIAP 673
I+H+D+ S N+ ++ + + DFG + + R I G ++AP
Sbjct: 148 ---AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 674 ELAYTMV---------VTEKCDVYSFGVVALEVLMGRHP 703
E+ + ++ DV++ G + E+ P
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA++K+ + E T+ E +L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 142
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 143 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 491 FEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEA 549
FED+ K T + +G G Y V A L NGK A+K + + + F+
Sbjct: 10 FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS--RVFREVE 62
Query: 550 HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRV 604
+ ++NI++L F +L+++ ++ GS+ ++ N+ EA
Sbjct: 63 TLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-------- 114
Query: 605 NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-------KLEAFVADFGTARLLDSD 657
+++ VA AL +LH I HRD+ NIL S K+ F D G+ L++
Sbjct: 115 RVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDF--DLGSGMKLNNS 169
Query: 658 SS-----NRTIVAGTYGYIAPELA--YTMVVT---EKCDVYSFGVVALEVLMGRHP 703
+ T G+ Y+APE+ +T T ++CD++S GVV +L G P
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + R G ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + R G ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 128
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 184
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 48/217 (22%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G+G YGSV Y A+L + VA+KKL R FQ+ H ++ +R + +L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRP----------FQSLIH--ARRTYREL-RL 72
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV----NIIKCVA-------- 611
H+ + L+ + S+ D+ V L T+ NI+KC A
Sbjct: 73 LKHLKHENVIGLLDVFTPATSI-----EDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 127
Query: 612 ------NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
L Y+H I+HRD+ +N+ +N E + DFG AR D + T
Sbjct: 128 LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM---TGYV 181
Query: 666 GTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
T Y APE+ M + D++S G + E+L G+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 48/217 (22%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G+G YGSV Y A+L + VA+KKL R FQ+ H ++ +R + +L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRP----------FQSLIH--ARRTYREL-RL 80
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV----NIIKCVA-------- 611
H+ + L+ + S+ D+ V L T+ NI+KC A
Sbjct: 81 LKHLKHENVIGLLDVFTPATSI-----EDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 135
Query: 612 ------NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
L Y+H I+HRD+ +N+ +N E + DFG AR D + T
Sbjct: 136 LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYV 189
Query: 666 GTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
T Y APE+ M + D++S G + E+L G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 79
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + R G ++
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+ ++ IG G +G V K + G + A KK+ + E+ + F+ E ++ + H
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDV---DRFKQEIEIMKSLDHP 66
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR----VNIIKCVANAL 614
NI++LY ++L+ + G LF E VV R I+K V +A+
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELF-------ERVVHKRVFRESDAARIMKDVLSAV 119
Query: 615 SYLHHDCMPSIVHRDISSNNILL-----NSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
+Y H ++ HRD+ N L +S L+ + DFG A RT V GT
Sbjct: 120 AYCHK---LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTPY 173
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++P++ + E CD +S GV+ +L G P
Sbjct: 174 YVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 99
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T Y
Sbjct: 158 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWY 211
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 128
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 184
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 501 FDIKYCIGTGGYGSVYKAQLPNGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+ ++ IG G +G V K + G + A KK+ + E+ + F+ E ++ + H
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDV---DRFKQEIEIMKSLDHP 83
Query: 559 NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR----VNIIKCVANAL 614
NI++LY ++L+ + G LF E VV R I+K V +A+
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELF-------ERVVHKRVFRESDAARIMKDVLSAV 136
Query: 615 SYLHHDCMPSIVHRDISSNNILL-----NSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
+Y H ++ HRD+ N L +S L+ + DFG A RT V GT
Sbjct: 137 AYCHK---LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTPY 190
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++P++ + E CD +S GV+ +L G P
Sbjct: 191 YVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+KA+ G+ VALKK+ E E+ F + E +L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 566 FCLHK-----KCMFLIYKYMKRGSLFCFLRNDYEA----VVLDWTMR--VNIIKCVANAL 614
C K +C IY +F F +D V++ +T+ +++ + N L
Sbjct: 85 ICRTKASPYNRCKASIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR---LLDSDSSNRTI-VAGTYGY 670
Y+H + I+HRD+ + N+L+ +ADFG AR L + NR T Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 671 IAPEL 675
PEL
Sbjct: 196 RPPEL 200
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + D+G AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG V A KV VA+KK+ + E T+ E +L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 566 FCL-----HKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALS 615
K ++++ M+ L+ L+ ND+ L +R L
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILR---------GLK 140
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIA 672
Y+H +++HRD+ +N+LLN+ + + DFG AR+ D D + T T Y A
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 673 PELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
PE+ + T+ D++S G + E+L R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R + E +L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 566 -FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
F + Y+ + L N + L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTE 683
I+HRD+ +N+ +N E + DFG AR D + T T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQ 202
Query: 684 KCDVYSFGVVALEVLMGR 701
D++S G + E+L GR
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 46/229 (20%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
I + E + +G+G YGSV + + +G +A+KKL R FQ+ H
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP----------FQSIIH-- 93
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC-- 609
+K +R + +L H+ + L+ + SL F ND Y L NI+KC
Sbjct: 94 AKRTYREL-RLLKHMKHENVIGLLDVFTPATSLEEF--NDVYLVTHLMGADLNNIVKCQK 150
Query: 610 ------------VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657
+ L Y+H I+HRD+ +N+ +N E + DFG AR D +
Sbjct: 151 LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 207
Query: 658 SSNRTIVAGTYGYIAPE-----LAYTMVVTEKCDVYSFGVVALEVLMGR 701
T T Y APE + Y M V D++S G + E+L GR
Sbjct: 208 ---MTGYVATRWYRAPEIMLNWMHYNMTV----DIWSVGCIMAELLTGR 249
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G YG+V+KA+ ++VALK++ R + ++ +S E +L ++ H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAV--VLDWTMRVNIIKCVANALSYLHHDCMP 623
K + L++++ + L+ +++ LD + + + + L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR--- 120
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-TMVVT 682
+++HRD+ N+L+N E +A+FG AR + T Y P++ + + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 683 EKCDVYSFGVVALEVLMGRHP 703
D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+DI +G+G +G V++ + G+V K ++ T + +NE +++++ H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFIN---TPYPLDKYTVKNEISIMNQLHHPK 109
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-NDY---EAVVLDWTMRVNIIKCVANALS 615
++ L+ K M LI +++ G LF + DY EA V +N ++ L
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV------INYMRQACEGLK 163
Query: 616 YLHHDCMPSIVHRDISSNNILLNSKLEAFVA--DFGTARLLDSDSSNRTIVAGTYGYIAP 673
++H SIVH DI NI+ +K + V DFG A L+ D + A T + AP
Sbjct: 164 HMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAP 219
Query: 674 ELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
E+ V D+++ GV+ +L G P
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+KA+ G+ VALKK+ E E+ F + E +L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 566 FCLHK-----KCMFLIYKYMKRGSLFCFLRNDYEA----VVLDWTMR--VNIIKCVANAL 614
C K +C IY +F F +D V++ +T+ +++ + N L
Sbjct: 85 ICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR---LLDSDSSNRTI-VAGTYGY 670
Y+H + I+HRD+ + N+L+ +ADFG AR L + NR T Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 671 IAPEL 675
PEL
Sbjct: 196 RPPEL 200
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+KA+ G+ VALKK+ E E+ F + E +L + H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 566 FCLHK-----KCMFLIYKYMKRGSLFCFLRNDYEA----VVLDWTMR--VNIIKCVANAL 614
C K +C IY +F F +D V++ +T+ +++ + N L
Sbjct: 84 ICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR---LLDSDSSNRTI-VAGTYGY 670
Y+H + I+HRD+ + N+L+ +ADFG AR L + NR T Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 671 IAPEL 675
PEL
Sbjct: 195 RPPEL 199
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL + FQ+ H +K +R + +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKP----------FQSIIH--AKRTYREL-RLLK 88
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR D + T T Y
Sbjct: 147 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 200
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG G +G V+KA+ G+ VALKK+ E E+ F + E +L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 566 FCLHK-----KC---MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
C K +C ++L++ + + L L N L RV ++ + N L Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR---LLDSDSSNRTI-VAGTYGYIAP 673
H + I+HRD+ + N+L+ +ADFG AR L + NR T Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 674 EL 675
EL
Sbjct: 199 EL 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLS-KIA 556
++F+ +G G +G V A++ G + A+K L + + E +LS
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H + +L+ +F + +++ G L ++ ++ D + +AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFDEARARFYAAEIISALMF 139
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
LH I++RD+ +N+LL+ + +ADFG + + GT YIAPE+
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
M+ D ++ GV+ E+L G P E
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F+ +G G +G V + G+ A+K L + E VL H
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 71 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSR--ERVFSEDRARFYGAEIVS-ALDYL 126
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + ++V+RD+ N++L+ + DFG + D + GT Y+APE+
Sbjct: 127 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI----- 560
+G G YG V K + +P+G+++A+K++ T + Q + I+ R +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIR------ATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRV------NIIKCVANAL 614
V YG + +++ + M SL F + V+D + I + AL
Sbjct: 69 VTFYGALFREGDVWICMELMDT-SLDKFYKQ-----VIDKGQTIPEDILGKIAVSIVKAL 122
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
+LH S++HRD+ +N+L+N+ + + DFG + L D + + I AG Y+APE
Sbjct: 123 EHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPE 179
Query: 675 L--------AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y++ K D++S G+ +E+ + R P
Sbjct: 180 RINPELNQKGYSV----KSDIWSLGITMIELAILRFP 212
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F+ +G G +G V + G+ A+K L + E VL H
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 69 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSR--ERVFSEDRARFYGAEIVS-ALDYL 124
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + ++V+RD+ N++L+ + DFG + D + GT Y+APE+
Sbjct: 125 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H N++ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 83
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR + T T Y
Sbjct: 142 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWY 195
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F+ +G G +G V + G+ A+K L + E VL H
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 209 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSR--ERVFSEDRARFYGAEIVS-ALDYL 264
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + ++V+RD+ N++L+ + DFG + D + GT Y+APE+
Sbjct: 265 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F+ +G G +G V + G+ A+K L + E VL H
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 212 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSR--ERVFSEDRARFYGAEIVS-ALDYL 267
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + ++V+RD+ N++L+ + DFG + D + GT Y+APE+
Sbjct: 268 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 500 DFDIKYCIGTGGYGSV-YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
+F+ +G G +G V + G+ A+K L + E VL H
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 559 NIVKL-YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+ L Y F H + F++ +Y G LF L E V + R + V+ AL YL
Sbjct: 70 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSR--ERVFSEDRARFYGAEIVS-ALDYL 125
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H + ++V+RD+ N++L+ + DFG + D + GT Y+APE+
Sbjct: 126 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
D + GVV E++ GR P
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 156
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 215
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 216 MWSLGVIMYILLCGYPP 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 83
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR + T T Y
Sbjct: 142 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWY 195
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 501 FDIKYCIGTGGYGSVYK-AQLPNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA 556
+D +G+G + V K + G A K + + T+ + + E +L +I
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 557 HRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616
H N++ L+ +K + LI + + G LF FL E L +K + N + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYY 129
Query: 617 LHHDCMPSIVHRDISSNNILLNS----KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672
LH I H D+ NI+L K + DFG A +D + + I GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 673 PELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
PE+ + + D++S GV+ +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 83
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DFG AR + T T Y
Sbjct: 142 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWY 195
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R + E +L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 566 -FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
F + Y+ + L N + L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTE 683
I+HRD+ +N+ +N E + DFG AR D + T T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQ 202
Query: 684 KCDVYSFGVVALEVLMGR 701
D++S G + E+L GR
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
K+++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 47 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 105
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 106 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 155
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 156 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 215 LFICLSGYPP 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 148
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 207
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 208 MWSLGVIMYILLCGYPP 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 146
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 205
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 206 MWSLGVIMYILLCGYPP 222
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H N++ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 147
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 206
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 207 MWSLGVIMYILLCGYPP 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 140
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 199
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 507 IGTGGYGSVYK-AQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G G +G V+K + G +A K + +T +NE V++++ H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKII---KTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 566 FCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
K + L+ +Y+ G LF + Y LD + +K + + ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL---FMKQICEGIRHMHQ---MY 207
Query: 625 IVHRDISSNNIL-LNSKLEAF-VADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT 682
I+H D+ NIL +N + + DFG AR + GT ++APE+ V+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP-REKLKVNFGTPEFLAPEVVNYDFVS 266
Query: 683 EKCDVYSFGVVALEVLMGRHP 703
D++S GV+A +L G P
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP 287
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H N++ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H N++ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S GV+ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 141
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 200
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 201 MWSLGVIMYILLCGYPP 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S GV+ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
K+++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 100 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 209 LFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
K+++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 100 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 209 LFICLSGYPP 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H N++ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRD 192
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 251
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 252 MWSLGVIMYILLCGYPP 268
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
K+++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 40 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 98
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 99 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 148
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 149 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 208 LFICLSGYPP 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRD 186
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 245
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 246 MWSLGVIMYILLCGYPP 262
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRD 142
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 142
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 498 TEDFDI-KYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEA--HVLS 553
T+D+ + K +G G G V + G+ ALK L+ + + +Q H++
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 86
Query: 554 KIAHRNIVKLYGFCLH-KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
I+ +Y H K+C+ +I + M+ G LF ++ + + I++ +
Sbjct: 87 ------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGT 139
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYG 669
A+ +LH +I HRD+ N+L SK + V DFG A+ +++ + Y
Sbjct: 140 AIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYT 192
Query: 670 --YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APE+ + CD++S GV+ +L G P
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
K+++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 100 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 209 LFICLSGYPP 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G+G YGSV Y A+L + VA+KKL R +++ E +L + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 564 YG-FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
F Y+ + L N ++ L ++ + L Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS--- 149
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVV 681
I+HRD+ +N+ +N E + DFG AR D + T T Y APE+ M
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYVATRWYRAPEIMLNWMHY 206
Query: 682 TEKCDVYSFGVVALEVLMGR 701
+ D++S G + E+L G+
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + DF AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + + R G ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKA---------QLPNGKVV--ALKKLHRAETEETTFFNSFQN 547
ED +G G + ++K QL +V+ L K HR +E SF
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE------SFFE 61
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
A ++SK++H+++V YG C+ L+ +++K GSL +L+ + + + W + V
Sbjct: 62 AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--A 119
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS----NRTI 663
K +A A+ +L + +++H ++ + NILL + + + +L D S + I
Sbjct: 120 KQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 664 VAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVLMG 700
+ ++ PE + + D +SFG E+ G
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 501 FDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
+++ IGTGG+ V A + G++VA+K + + + + E L + H++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQH 69
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
I +LY +F++ +Y G LF ++ + + + + RV + + + +A++Y+H
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIIS--QDRLSEEETRV-VFRQIVSAVAYVHS 126
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFG-TARLLDSDSSNRTIVAGTYGYIAPELAY- 677
HRD+ N+L + + + DFG A+ + + G+ Y APEL
Sbjct: 127 Q---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 678 TMVVTEKCDVYSFGVVALEVLM 699
+ + DV+S G++ L VLM
Sbjct: 184 KSYLGSEADVWSMGIL-LYVLM 204
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 498 TEDFDI-KYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEA--HVLS 553
T+D+ + K +G G G V + G+ ALK L+ + + +Q H++
Sbjct: 8 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 67
Query: 554 KIAHRNIVKLYGFCLH-KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
I+ +Y H K+C+ +I + M+ G LF ++ + + I++ +
Sbjct: 68 ------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGT 120
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYG 669
A+ +LH +I HRD+ N+L SK + V DFG A+ +++ + Y
Sbjct: 121 AIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYT 173
Query: 670 --YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
Y+APE+ + CD++S GV+ +L G P
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 50/236 (21%)
Query: 497 ATEDFDIK-------YCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNE 548
A E+F++K +G G YG V K + +P+G++ A+K++ RA NS Q +
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI-RATV------NS-QEQ 76
Query: 549 AHVLSK--IAHRNI-----VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLD-- 599
+L I+ R + V YG L ++ I + SL F + V+D
Sbjct: 77 KRLLXDLDISXRTVDCPFTVTFYG-ALFREGDVWICXELXDTSLDKFYKQ-----VIDKG 130
Query: 600 WTMRVNIIKCVA----NALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655
T+ +I+ +A AL +LH S++HRD+ +N+L+N+ + DFG + L
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLV 188
Query: 656 SDSSNRTIVAGTYGYIAPEL--------AYTMVVTEKCDVYSFGVVALEVLMGRHP 703
D + + I AG Y APE Y++ K D++S G+ +E+ + R P
Sbjct: 189 DDVA-KDIDAGCKPYXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFP 239
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DF + IG GG+G VY + + GK+ A+K L + + NE +LS ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 559 N----IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ + Y F K F++ M G L L V + MR + + L
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIIL-GL 304
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++H+ +V+RD+ NILL+ ++D G A D GT+GY+APE
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPE 359
Query: 675 LAYTMVVTE-KCDVYSFGVVALEVLMGRHP 703
+ V + D +S G + ++L G P
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DF + IG GG+G VY + + GK+ A+K L + + NE +LS ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 559 N----IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ + Y F K F++ M G L L V + MR + + L
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIIL-GL 305
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++H+ +V+RD+ NILL+ ++D G A D GT+GY+APE
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPE 360
Query: 675 LAYTMVVTE-KCDVYSFGVVALEVLMGRHP 703
+ V + D +S G + ++L G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNE 548
+F+ ++++I IG G YG V A+ G+ VA+KK+ A T + + E
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-E 104
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVV-----LDW 600
+L H NI+ + K + Y + S++ L +D ++ L
Sbjct: 105 LKILKHFKHDNIIAI------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
+ + L Y+H ++HRD+ +N+L+N E + DFG AR L + +
Sbjct: 159 EHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 215
Query: 661 R----TIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRH--PGE 705
T T Y APEL ++ T+ D++S G + E+L R PG+
Sbjct: 216 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I K + A+ YLH +I HRD
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREA-SEIXKSIGEAIQYLH---SINIAHRD 186
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S T Y Y+APE+ + CD
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 245
Query: 687 VYSFGVVALEVLMGRHP 703
+S GV+ +L G P
Sbjct: 246 XWSLGVIXYILLCGYPP 262
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + FG AR D + + T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG---YVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 81
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + R G ++
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DF + IG GG+G VY + + GK+ A+K L + + NE +LS ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 559 N----IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ + Y F K F++ M G L L V + MR + + L
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIIL-GL 305
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++H+ +V+RD+ NILL+ ++D G A D GT+GY+APE
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPE 360
Query: 675 LAYTMVVTE-KCDVYSFGVVALEVLMGRHP 703
+ V + D +S G + ++L G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR 558
DF + IG GG+G VY + + GK+ A+K L + + NE +LS ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 559 N----IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL 614
+ + Y F K F++ M G L L V + MR + + L
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIIL-GL 305
Query: 615 SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPE 674
++H+ +V+RD+ NILL+ ++D G A D GT+GY+APE
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPE 360
Query: 675 LAYTMVVTE-KCDVYSFGVVALEVLMGRHP 703
+ V + D +S G + ++L G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + D G AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHRD+++ N ++ + DFG R + R G ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK--- 562
IG G YG V A K VA+KK+ + E T+ E +L + H N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 563 -LYGFCLHKKCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALSY 616
L L I + + L+ L+ ND+ L +R L Y
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR---------GLKY 159
Query: 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR---TIVAGTYGYIAP 673
+H +++HRD+ +N+L+N+ + + DFG AR+ D + + T T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 674 ELAY-TMVVTEKCDVYSFGVVALEVLMGR 701
E+ + T+ D++S G + E+L R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 496 KATEDF-DIKYCIGTGGYGSVYK-AQLPNGKVVA---LKKLHRAETEETTFFNSFQNEAH 550
+ EDF DI +G+G + V K + G A +KK + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
+L ++ H NI+ L+ ++ + LI + + G LF FL + L + IK +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQI 124
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARLLDSDSSNRTIVAG 666
+ ++YLH I H D+ NI+L K + DFG A ++ + I G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ + + D++S GV+ +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R + E +L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 566 -FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
F + Y+ + L N ++ L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTE 683
I+HRD+ +N+ +N E + DFG R D + T T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM---TGYVATRWYRAPEIMLNWMHYNQ 202
Query: 684 KCDVYSFGVVALEVLMGR 701
D++S G + E+L GR
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 495 IKATEDFDIKYCIGTGGYG----SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAH 550
I+ T+ +++K IG G Y ++KA V + K R TEE +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ--- 74
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVNIIKC 609
H NI+ L K ++++ + MK G L LR + + + I K
Sbjct: 75 ------HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAF-VADFGTARLLDSDSSNRTIVA 665
V YLH +VHRD+ +NIL + E+ + DFG A+ L +++
Sbjct: 129 V----EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ CD++S GV+ +L G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + D G AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 499 EDFDIKYCIGTGGYGSVYKA---------QLPNGKVV--ALKKLHRAETEETTFFNSFQN 547
ED +G G + ++K QL +V+ L K HR +E SF
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE------SFFE 61
Query: 548 EAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNII 607
A ++SK++H+++V YG C L+ +++K GSL +L+ + + + W + V
Sbjct: 62 AASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--A 119
Query: 608 KCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS----NRTI 663
K +A A+ +L + +++H ++ + NILL + + + +L D S + I
Sbjct: 120 KQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 664 VAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVLMG 700
+ ++ PE + + D +SFG E+ G
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 51/258 (19%)
Query: 494 IIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVV-ALKKLHRAETEETT--FFNSFQNEAH 550
+++ + + +K IG G YG V A + + A+K +++ + + + E
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLF----CFLRN--------------- 591
++ K+ H NI +LY ++ + L+ + G L F+ +
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 592 -----DYEAV---------VLDWTMR----VNIIKCVANALSYLHHDCMPSIVHRDISSN 633
+ EA+ LD+ R NI++ + +AL YLH+ I HRDI
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPE 197
Query: 634 NILL--NSKLEAFVADFGTAR----LLDSDSSNRTIVAGTYGYIAPELAYTMVVT--EKC 685
N L N E + DFG ++ L + + T AGT ++APE+ T + KC
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 686 DVYSFGVVALEVLMGRHP 703
D +S GV+ +LMG P
Sbjct: 258 DAWSAGVLLHLLLMGAVP 275
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 503 IKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNI 560
++ + GG+ VY+AQ + +G+ ALK+L E E+ + E + K++ H NI
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN---RAIIQEVCFMKKLSGHPNI 88
Query: 561 VKLYGFCLHK----------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCV 610
V+ FC + FL+ + +G L FL+ L + I
Sbjct: 89 VQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS------DSSNRTIV 664
A+ ++H P I+HRD+ N+LL+++ + DFG+A + + R +V
Sbjct: 146 CRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 665 A------GTYGYIAPE---LAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705
T Y PE L + EK D+++ G + + +HP E
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G+G YGSV A G VA+KKL R FQ+ H +K +R + +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP----------FQSIIH--AKRTYREL-RLLK 76
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKC--------------V 610
H+ + L+ + SL F ND Y L NI+KC +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
L Y+H I+HRD+ +N+ +N E + D G AR D + T T Y
Sbjct: 135 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM---TGYVATRWY 188
Query: 671 IAPELAYT-MVVTEKCDVYSFGVVALEVLMGR 701
APE+ M + D++S G + E+L GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 486 DGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNS 544
D + FED+ + E IG G + V + G+ A+K + A+ + ++
Sbjct: 17 DDDVLFEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 545 --FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDW 600
+ EA + + H +IV+L +++++++M G+ CF ++ V
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSE 129
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSD 657
+ + ++ + AL Y H + +I+HRD+ N+LL SK + + DFG A L
Sbjct: 130 AVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Query: 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
GT ++APE+ + DV+ GV+ +L G
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNE 548
+F+ ++++I IG G YG V A+ G+ VA+KK+ A T + + E
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-E 103
Query: 549 AHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL---RNDYEAVV-----LDW 600
+L H NI+ + K + Y + S++ L +D ++ L
Sbjct: 104 LKILKHFKHDNIIAI------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660
+ + L Y+H ++HRD+ +N+L+N E + DFG AR L + +
Sbjct: 158 EHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 214
Query: 661 R----TIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRH--PGE 705
T T Y APEL ++ T+ D++S G + E+L R PG+
Sbjct: 215 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 498 TEDFDIKYCIGTGGYGS----VYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
++ + +K IG G Y V+KA V + K R +EE +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ------ 79
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVN--IIKCV 610
H NI+ L K ++L+ + M+ G L LR + ++ R ++ +
Sbjct: 80 ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF------FSEREASFVLHTI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAF-VADFGTARLLDSDSSNRTIVAG 666
+ YLH +VHRD+ +NIL + E + DFG A+ L +++
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ E CD++S G++ +L G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKL--HRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
+G GG+ V + L +G ALK++ H + E Q EA + H NI++L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA-----QREADMHRLFNHPNILRL 91
Query: 564 YGFCLHKKCM----FLIYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANALSYLH 618
+CL ++ +L+ + KRG+L+ + R + L + ++ + L +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 619 HDCMPSIVHRDISSNNILLNSKLEAFVADFGT--ARLLDSDSSNRTIVAGTYG------- 669
HRD+ NILL + + + D G+ + + S + + +
Sbjct: 152 ---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 670 YIAPELAYTM---VVTEKCDVYSFGVVALEVLMGRHP 703
Y APEL V+ E+ DV+S G V ++ G P
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
++++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 224
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVAN----ALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K A+ YLH + I+HRD+ N+LL+S
Sbjct: 225 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 274
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 275 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 334 LFICLSGYPP 343
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 524 KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583
++++ +K E + + E +L K+ H I+K+ F + +++ + M+ G
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 238
Query: 584 SLFCFLRNDYEAVVLDWTMRVNIIKC----VANALSYLHHDCMPSIVHRDISSNNILLNS 639
LF + VV + ++ K + A+ YLH + I+HRD+ N+LL+S
Sbjct: 239 ELF-------DKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 288
Query: 640 KLEAF---VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVV 693
+ E + DFG +++L S RT+ GT Y+APE+ T D +S GV+
Sbjct: 289 QEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 694 ALEVLMGRHP 703
L G P
Sbjct: 348 LFICLSGYPP 357
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629
+KC+ ++ + + G LF +++ + + I+K + A+ YLH +I HRD
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRD 140
Query: 630 ISSNNILLNSKLEAFV---ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCD 686
+ N+L SK + DFG A+ S +S Y Y+APE+ + CD
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY-YVAPEVLGPEKYDKSCD 199
Query: 687 VYSFGVVALEVLMGRHP 703
++S GV+ +L G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ IGTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +YM G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + VADFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ IGTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +YM G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + VADFG A+ +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV---- 191
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 498 TEDFDIKYCIGTGGYGS----VYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLS 553
++ + +K IG G Y V+KA V + K R +EE +L
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---------LLR 76
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVN--IIKCV 610
H NI+ L K ++L+ + M+ G L LR + ++ R ++ +
Sbjct: 77 YGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF------FSEREASFVLHTI 130
Query: 611 ANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAF-VADFGTARLLDSDSSNRTIVAG 666
+ YLH +VHRD+ +NIL + E + DFG A+ L +++
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ E CD++S G++ +L G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 530 KLHRAETEETTFFNSFQ---------NEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580
++HR E ++T F + + E + + IV LYG + + + +
Sbjct: 108 EVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 167
Query: 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640
+ GSL ++ E L + + L YLH I+H D+ ++N+LL+S
Sbjct: 168 EGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSD 221
Query: 641 -LEAFVADFGTARLLDSDSSNRTIVAGTY-----GYIAPELAYTMVVTEKCDVYSFGVVA 694
A + DFG A L D ++++ G Y ++APE+ K DV+S +
Sbjct: 222 GSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMM 281
Query: 695 LEVLMGRHP 703
L +L G HP
Sbjct: 282 LHMLNGCHP 290
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHR++++ N ++ + DFG R + R G ++
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 507 IGTGGYGSVYKAQLPN---GKV---VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560
+G G +G VY+ + G+ VA+K ++ + + F NEA V+ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 83
Query: 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-------NDYEAVVLDWTMRVNIIKCVANA 613
V+L G + ++ + M G L +LR N+ + + +A+
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 614 LSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYI 671
++YL+ VHR++++ N ++ + DFG R + R G ++
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 672 APELAYTMVVTEKCDVYSFGVVALEV 697
APE V T D++SFGVV E+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGT 667
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +PG + ID
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKIDE 301
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
R RM D + L C H +P RPT + +
Sbjct: 302 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 346
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGT 667
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +PG + ID
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKIDE 303
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
R RM D + L C H +P RPT + +
Sbjct: 304 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 348
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 78
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 134
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 135 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-Y 193
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGT 667
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +PG + ID
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKIDE 308
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
R RM D + L C H +P RPT + +
Sbjct: 309 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 353
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGT 667
VA + +L +HRD+++ NILL+ K + DFG AR + D D +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVL---MGRHPGEXXXXXXXXXXDQKIMLIDV 724
++APE + V T + DV+SFGV+ E+ +PG + ID
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------------VKIDE 310
Query: 725 LDSRLSPPVDRMVMQDIVL--VTTVALACLHSKPKFRPTMQRVCQ 767
R RM D + L C H +P RPT + +
Sbjct: 311 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 355
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 8/248 (3%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G GG+G V Q+ GK+ A KKL + ++ NE +L K+ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
K + L+ M G L + + +A + V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE-ARAVFYAAEICCGLEDLHRE---RI 307
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
V+RD+ NILL+ ++D G A + + + V GT GY+APE+ T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSP 366
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIM--LIDVLDSRLSPPVDRMVMQDIVL 743
D ++ G + E++ G+ P + ++++ + + R SP + Q +
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCK 426
Query: 744 VTTVALAC 751
L C
Sbjct: 427 DPAERLGC 434
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
I++RD+ +N++L+S+ +ADFG + D GT YIAPE+ +
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 684 KCDVYSFGVVALEVLMGRHPGE 705
D ++FGV+ E+L G+ P E
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 490 AFEDIIKATEDFDIKYCIGTGGYGSVY-KAQLPNGKVVALKKLHRAETEETTFFNSFQNE 548
A E K + F ++ G G +G+V + G VA+KK+ ++ F N
Sbjct: 14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQI 69
Query: 549 AHVLSKIAHRNIVKL--YGFCLHKKCMFLIY-----KYMKRGSLFCFLRNDYEAVVLDWT 601
L+ + H NIV+L Y + L ++ IY +Y+ +L RN Y V
Sbjct: 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPP 128
Query: 602 MRVNI-IKCVANALSYLHHDCMPSI--VHRDISSNNILLNSKLEAF-VADFGTARLLDSD 657
+ + + + + ++ LH +PS+ HRDI +N+L+N + DFG+A+ L
Sbjct: 129 ILIKVFLFQLIRSIGCLH---LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Query: 658 SSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMG 700
N + Y Y APEL + T D++S G + E+++G
Sbjct: 186 EPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 211 QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEI-GNMTGILK 269
Q + L N+ L +GGNKL S L LTNLTYL L N L S+P + +T + +
Sbjct: 57 QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKE 113
Query: 270 VDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPI 329
+ + N ++ +L+ L YL+++ N L L +L LDLS N+L
Sbjct: 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173
Query: 330 PPEIGKCSELRNITLRNNNLSGSIPPEI--GLMKLEYLDLSHNKLNGTIPPFLY 381
K ++L+++ L N L S+P + L L+Y+ L N + T P Y
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 495 IKATEDFDIKYCIGTGGYG----SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAH 550
I+ T+ +++K IG G Y ++KA V + K R TEE +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ--- 74
Query: 551 VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLF-CFLRNDYEAVVLDWTMRVNIIKC 609
H NI+ L K ++++ + K G L LR + + + I K
Sbjct: 75 ------HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAF-VADFGTARLLDSDSSNRTIVA 665
V YLH +VHRD+ +NIL + E+ + DFG A+ L +++
Sbjct: 129 V----EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
T ++APE+ CD++S GV+ L G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 8/248 (3%)
Query: 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
+G GG+G V Q+ GK+ A KKL + ++ NE +L K+ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625
K + L+ M G L + + +A + V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE-ARAVFYAAEICCGLEDLHRE---RI 307
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKC 685
V+RD+ NILL+ ++D G A + + + V GT GY+APE+ T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSP 366
Query: 686 DVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIM--LIDVLDSRLSPPVDRMVMQDIVL 743
D ++ G + E++ G+ P + ++++ + + R SP + Q +
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCK 426
Query: 744 VTTVALAC 751
L C
Sbjct: 427 DPAERLGC 434
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEK 684
I++RD+ +N++L+S+ +ADFG + D GT YIAPE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 685 CDVYSFGVVALEVLMGRHPGE 705
D ++FGV+ E+L G+ P E
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFE 543
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNS-----FQNEAHVLSKIAHRNI 560
+G+G +G V+ A K V +K + + + E + E +LS++ H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 561 VKLYGFCLHKKCMFLIYKYMKRG-SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
+K+ ++ L+ + G LF F+ LD + I + + +A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLR- 147
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675
+ I+HRDI NI++ + DFG+A L+ T GT Y APE+
Sbjct: 148 --LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF-CGTIEYCAPEV 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 530 KLHRAETEETTFFNSFQ---------NEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580
++HR E ++T F + + E + + IV LYG + + + +
Sbjct: 89 EVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 148
Query: 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640
+ GSL ++ E L + + L YLH I+H D+ ++N+LL+S
Sbjct: 149 EGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSD 202
Query: 641 -LEAFVADFGTARLLDSDSSNRTIVAGTY-----GYIAPELAYTMVVTEKCDVYSFGVVA 694
A + DFG A L D + ++ G Y ++APE+ K DV+S +
Sbjct: 203 GSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMM 262
Query: 695 LEVLMGRHP 703
L +L G HP
Sbjct: 263 LHMLNGCHP 271
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 77
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 133
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 192
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ IGTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + VADFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT +AGT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLXQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 495 IKATEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHVLS 553
+K ++++IK+ IG G YG VY A N K VA+KK++R E+ E +L+
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRM-FEDLIDCKRILREITILN 82
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
++ I++L+ + + + Y+ L+ ++ + V I + N
Sbjct: 83 RLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTI--LYNL 140
Query: 614 L---SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659
L ++H I+HRD+ N LLN + DFG AR ++SD
Sbjct: 141 LLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 43/242 (17%)
Query: 484 NYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFF 542
++ GR FED+ + ED +G G + V L + A+K + E +
Sbjct: 5 SFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKII---EKQPGHIR 54
Query: 543 NSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-----NDYEAV 596
+ E +L + HRN+++L F + +L+++ M+ GS+ + N+ EA
Sbjct: 55 SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-----SKLEAFVADFGTA 651
V +++ VA+AL +LH+ I HRD+ NIL S ++ D G+
Sbjct: 115 V--------VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163
Query: 652 RLLDSDSSNRT-----IVAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGR 701
L+ D S + G+ Y+APE+ + ++CD++S GV+ +L G
Sbjct: 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223
Query: 702 HP 703
P
Sbjct: 224 PP 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLXQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLXQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 43/242 (17%)
Query: 484 NYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFF 542
++ GR FED+ + ED +G G + V L + A+K + E +
Sbjct: 5 SFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKII---EKQPGHIR 54
Query: 543 NSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLR-----NDYEAV 596
+ E +L + HRN+++L F + +L+++ M+ GS+ + N+ EA
Sbjct: 55 SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 597 VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADF--GTA 651
V +++ VA+AL +LH+ I HRD+ NIL N + DF G+
Sbjct: 115 V--------VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSG 163
Query: 652 RLLDSDSSNRT-----IVAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGR 701
L+ D S + G+ Y+APE+ + ++CD++S GV+ +L G
Sbjct: 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223
Query: 702 HP 703
P
Sbjct: 224 PP 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 69
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLXQVIQMELDHERMSYLL 125
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-Y 184
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 610 VANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669
++ L +LH I++RD+ +N++L+S+ +ADFG + D GT
Sbjct: 129 ISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
YIAPE+ + D +++GV+ E+L G+ P
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATE----------DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E FD +GTG +G V + +G A+K L + + +
Sbjct: 43 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 102
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFX 160
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 161 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 212
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 213 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 507 IGTGGYG--SVYKAQLPN---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G S+Y N G++VA+K L E + +Q E +L + H +IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + K + L+ +Y+ GSL +L + + + + ++YLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH----CVGLAQLLLFAQQICEGMAYLH- 128
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYG--YIAPELA 676
+HR +++ N+LL++ + DFG A+ + + R G + APE
Sbjct: 129 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 187 KECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 507 IGTGGYG--SVYKAQLPN---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G S+Y N G++VA+K L E + +Q E +L + H +IV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + K + L+ +Y+ GSL +L + + + + ++YLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH----CVGLAQLLLFAQQICEGMAYLH- 129
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYG--YIAPELA 676
+HR +++ N+LL++ + DFG A+ + + R G + APE
Sbjct: 130 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 188 KECKFYYASDVWSFGVTLYELL 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G G V A G VA+KKL R FQN+ H +K A+R +V L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRP----------FQNQTH--AKRAYRELVLLK- 76
Query: 566 FCL-HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL-- 617
C+ HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 -CVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIHMELDHERMSYLLY 131
Query: 618 ------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
H I+HRD+ +NI++ S + DFG AR ++ V Y Y
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-YR 190
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M E D++S G + E++ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 548 EAHVLSKIAHRNIVKLYGF-----CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTM 602
E VL K+ H+NIVKL+ HK LI ++ GSL+ L A L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESE 113
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFGTARLLDSDS 658
+ +++ V +++L + IVHR+I NI+ + + + DFG AR L+ D
Sbjct: 114 FLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DD 169
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEK---------CDVYSFGVVALEVLMGRHP 703
+ GT Y+ P++ Y V K D++S GV G P
Sbjct: 170 EQFVXLYGTEEYLHPDM-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATE----------DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E FD +GTG +G V + +G A+K L + + +
Sbjct: 17 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 76
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 77 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFX 134
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 135 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 186
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 187 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 79 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 130
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 131 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFX 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFX 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFX 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 69
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 125
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 126 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 184
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 214
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 77
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 133
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 192
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 75
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 131
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 132 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 190
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 70
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 126
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 185
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 215
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 70
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 126
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 185
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 548 EAHVLSKIAHRNIVKLYGF-----CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTM 602
E VL K+ H+NIVKL+ HK LI ++ GSL+ L A L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESE 113
Query: 603 RVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFGTARLLDSDS 658
+ +++ V +++L + IVHR+I NI+ + + + DFG AR L+ D
Sbjct: 114 FLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEK---------CDVYSFGVVALEVLMGRHP 703
++ GT Y+ P++ Y V K D++S GV G P
Sbjct: 171 QFVSLY-GTEEYLHPDM-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFAEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 77
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 133
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 192
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 95 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 146
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 147 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 8 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 67
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 68 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 125
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 126 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 181
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 182 WT---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL 698
APE+ M E D++S G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 477 GDVFSIWNYDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAET 536
G S+ DG +I F K +G G G++ + + + VA+K++
Sbjct: 2 GSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI----- 56
Query: 537 EETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF-LIYKYMKRGSLFCFL-RNDY 593
F+ E +L + H N+++ FC K F I + +L ++ + D+
Sbjct: 57 -LPECFSFADREVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDF 113
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL-----NSKLEAFVADF 648
+ L+ + +++ + L++LH +IVHRD+ +NIL+ + K++A ++DF
Sbjct: 114 AHLGLE---PITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDF 167
Query: 649 GTARLL---DSDSSNRTIVAGTYGYIAPELAYTMVVTEKC--------DVYSFGVVALEV 697
G + L S R+ V GT G+IAPE+ ++E C D++S G V V
Sbjct: 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYV 222
Query: 698 L-MGRHP 703
+ G HP
Sbjct: 223 ISEGSHP 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 178
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT---WTLCGTPEYLAPEIIL 232
Query: 678 TMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATE----------DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E FD +GTG +G V + +G A+K L + + +
Sbjct: 9 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 68
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 69 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFS 126
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 127 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV---- 178
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 179 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 75 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 126
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 127 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 114
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 170
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 229
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 259
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 174
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 175 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHV-LSKIAHRNIVKLY 564
+G G +G V++ + G A+KK+ F+ E V + ++ IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G + + + ++ GSL ++ + L + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLH---TRR 170
Query: 625 IVHRDISSNNILLNSK-LEAFVADFGTARLLDSDSSNRTIVAGTY-----GYIAPELAYT 678
I+H D+ ++N+LL+S A + DFG A L D ++++ G Y ++APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHP 703
K D++S + L +L G HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
++ L+ + + LI +Y G +F + +V + + + +IK + + YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV-IRLIKQILEGVYYLHQ 149
Query: 620 DCMPSIVHRDISSNNILLNSKL---EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA 676
+ +IVH D+ NILL+S + + DFG +R + R I+ GT Y+APE+
Sbjct: 150 N---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-GTPEYLAPEIL 205
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+T D+++ G++A +L P
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 158
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 211
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVL-SKIAHRNIVKLY 564
+G G +G V++ + G A+KK+ F+ E V + ++ IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624
G + + + ++ GSL ++ + L + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLH---TRR 186
Query: 625 IVHRDISSNNILLNSK-LEAFVADFGTARLLDSDSSNRTIVAGTY-----GYIAPELAYT 678
I+H D+ ++N+LL+S A + DFG A L D ++++ G Y ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 679 MVVTEKCDVYSFGVVALEVLMGRHP 703
K D++S + L +L G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L + VA+KKL R FQN+ H +K A+R +V L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP----------FQNQTH--AKRAYRELV-L 114
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIQMELDHERMSYLL 170
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 229
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702
APE+ M E D++S G + E M RH
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGE--MVRH 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 191
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 76 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 127
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 128 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 191
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 530 KLHRAETEETTF--------FNSFQNEAHV-LSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580
++HR + ++T F F+ E V + ++ IV LYG + + + +
Sbjct: 87 EVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 146
Query: 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640
+ GSL ++ + L + + L YLH I+H D+ ++N+LL+S
Sbjct: 147 EGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSD 200
Query: 641 -LEAFVADFGTARLLDSDSSNRTIVAGTY-----GYIAPELAYTMVVTEKCDVYSFGVVA 694
A + DFG A L D ++++ G Y ++APE+ K D++S +
Sbjct: 201 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 260
Query: 695 LEVLMGRHP 703
L +L G HP
Sbjct: 261 LHMLNGCHP 269
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 76
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-Y 191
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL 698
APE+ M E D++S G + E++
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 507 IGTGGYG---SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G + Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 81
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 137
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 138 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 196
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL 698
APE+ M E D++S G + E++
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 604 VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663
++I +A A+ +LH ++HRD+ +NI V DFG +D D +T+
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 664 VA------------GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698
+ GT Y++PE + + K D++S G++ E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 500 DFDIKYCIGTGGYGSVYKAQLPNGKV----VALKKLHRAETEETTFFNSFQNEAHVLSKI 555
DF+ C+G GG+G V++A+ KV A+K++ E E L+K+
Sbjct: 7 DFEPIQCMGRGGFGVVFEAK---NKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKL 61
Query: 556 AHRNIVKLYGFCLH 569
H IV+ + L
Sbjct: 62 EHPGIVRYFNAWLE 75
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 174
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + GT Y+ PE M
Sbjct: 175 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN 559
++I++ IGTG YG V +A +VVA+KK+ R E+ E +L+++ H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDH 113
Query: 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLD--WTMRVNIIKCVANALSYL 617
+VK+ + K + K+ + + +D++ + + ++I + N L +
Sbjct: 114 VVKVLDIVIPKD----VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD--------------SDSSN--- 660
+ I+HRD+ N L+N V DFG AR +D D N
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 661 -------RTIVAG---TYGYIAPELAYTMV-VTEKCDVYSFGVVALEVL 698
+ + G T Y APEL TE DV+S G + E+L
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 522 NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFC--LHKKCMFLIYKY 579
G++VA+K L + + ++ E +L + H +I+K G C + L+ +Y
Sbjct: 59 TGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639
+ GSL +L + + + + ++YLH +HRD+++ N+LL++
Sbjct: 117 VPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDN 169
Query: 640 KLEAFVADFGTARLL-DSDSSNRTIVAGTYG--YIAPELAYTMVVTEKCDVYSFGVVALE 696
+ DFG A+ + + R G + APE DV+SFGV E
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 697 VL 698
+L
Sbjct: 230 LL 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 486 DGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNS 544
D + FED+ + E IG G + V + G+ A+K + A+ + ++
Sbjct: 19 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 72
Query: 545 --FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDW 600
+ EA + + H +IV+L +++++++M G+ CF ++ V
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSE 131
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSD 657
+ + ++ + AL Y H + +I+HRD+ + +LL SK + + FG A L
Sbjct: 132 AVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 188
Query: 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
GT ++APE+ + DV+ GV+ +L G
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 507 IGTGGYGSV---YKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563
IG+G G V Y A L VA+KKL R FQN+ H +K A+R +V L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRP----------FQNQTH--AKRAYRELV-L 70
Query: 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL- 617
HK + L+ + + SL F + ++ M N+ + + +SYL
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQMELDHERMSYLL 126
Query: 618 -------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGY 670
H I+HRD+ +NI++ S + DFG AR + V Y Y
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-Y 185
Query: 671 IAPELAYTMVVTEKCDVYSFGVVALEVL 698
APE+ M E D++S G + E++
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFX 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N++++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 ISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 10 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 70 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 128
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 129 -GRFXEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 183
Query: 654 LDSDSSNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 184 V----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y G +F LR
Sbjct: 82 LKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 507 IGTGGYG--SVYKAQLPN---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G S+Y N G++VA+K L +A+ + ++ E +L + H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCG-PQHRSGWKQEIDILRTLYHEHII 79
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + K + L+ +Y+ GSL +L + + + + ++YLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHS 135
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYG--YIAPELA 676
+HR++++ N+LL++ + DFG A+ + + R G + APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 486 DGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNS 544
D + FED+ + E IG G + V + G+ A+K + A+ + ++
Sbjct: 17 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 545 --FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCF--LRNDYEAVVLDW 600
+ EA + + H +IV+L +++++++M G+ CF ++ V
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSE 129
Query: 601 TMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF---VADFGTARLLDSD 657
+ + ++ + AL Y H + +I+HRD+ + +LL SK + + FG A L
Sbjct: 130 AVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG 700
GT ++APE+ + DV+ GV+ +L G
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y G +F LR
Sbjct: 82 LKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 507 IGTGGYG--SVYKAQLPN---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561
+G G +G S+Y N G++VA+K L +A+ + ++ E +L + H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCG-PQHRSGWKQEIDILRTLYHEHII 79
Query: 562 KLYGFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH 619
K G C + K + L+ +Y+ GSL +L + + + + ++YLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLH- 134
Query: 620 DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL-DSDSSNRTIVAGTYG--YIAPELA 676
+HR++++ N+LL++ + DFG A+ + + R G + APE
Sbjct: 135 --AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 677 YTMVVTEKCDVYSFGVVALEVL 698
DV+SFGV E+L
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 47/303 (15%)
Query: 494 IIKATEDFDIKYCIGTGGYG--SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV 551
I+ ++ +++ IG G +G + + + N ++VA+K + R E + N
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDENVKREIINH--- 69
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+ L + ++ +Y G LF + N A + +
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLI 125
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF--VADFGTARLLDSDSSNRTIVAGTYG 669
+ +SY H M + HRD+ N LL+ +ADFG ++ S ++ V GT
Sbjct: 126 SGVSYAH--AM-QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-GTPA 181
Query: 670 YIAPELAYTMVVTEK-CDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSR 728
YIAPE+ K DV+S GV +L+G +P E
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE-------------------- 221
Query: 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQL 788
P R + I+ V +H P+ R L +I + +P + ISI ++
Sbjct: 222 -EPKNFRKTIHRILNVQYAIPDYVHISPECR---------HLISRIFVADPAKRISIPEI 271
Query: 789 RNQ 791
RN
Sbjct: 272 RNH 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ ++ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 495 IKATEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHVLS 553
+ +++ IK+ IG G YG VY A N K VA+KK++R E+ E +L+
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILN 80
Query: 554 KIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613
++ I++LY + + Y+ L+ ++ + + +I + N
Sbjct: 81 RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNL 138
Query: 614 L---SYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS----------- 659
L +++H I+HRD+ N LLN V DFG AR ++S+
Sbjct: 139 LLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 660 -----NRTIVAG------TYGYIAPELAYTMV-VTEKCDVYSFGVVALEVL 698
N+ + T Y APEL T+ D++S G + E+L
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 484 NYDGRIAFEDIIKATED-FDIKYC-IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTF 541
+YD ++ + ED F+ + C +G G YG VYKA+ +GK L + E T
Sbjct: 4 DYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYAL--KQIEGTGI 61
Query: 542 FNSFQNEAHVLSKIAHRNIVKLYG-FCLH-KKCMFLIYKYMKRG--SLFCFLR---NDYE 594
S E +L ++ H N++ L F H + ++L++ Y + + F R + +
Sbjct: 62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKK 121
Query: 595 AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFGT 650
V L M +++ + + + YLH + ++HRD+ NIL+ + +AD G
Sbjct: 122 PVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 651 ARLLDS---DSSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVL 698
ARL +S ++ V T+ Y APEL T+ D+++ G + E+L
Sbjct: 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ + +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 196 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 28/125 (22%)
Query: 604 VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-------------LEAFVADFGT 650
+++++ +A+ +++LH I+HRD+ NIL+++ L ++DFG
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 651 ARLLDS-DSSNRTIV---AGTYGYIAPE-------LAYTMVVTEKCDVYSFGVVALEVL- 698
+ LDS SS RT + +GT G+ APE L +T D++S G V +L
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 699 MGRHP 703
G+HP
Sbjct: 235 KGKHP 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 38 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 97
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 98 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 156
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 157 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 212 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 95 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 146
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D + GT Y+ PE M
Sbjct: 147 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 191
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 29/231 (12%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 10 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 70 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 128
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 129 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 183
Query: 654 LDSDSSNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 184 V----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + G A+K L + + +
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFS 139
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N+L++ + V DFG A+ +
Sbjct: 140 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---- 191
Query: 659 SNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
RT + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 8/192 (4%)
Query: 514 SVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572
VY+A+ ++VALK + + F Q EA ++ ++V ++ F
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISS 632
+++ + + L LR L V I++ + S L HRD+
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGP---LAPPRAVAIVRQIG---SALDAAHAAGATHRDVKP 162
Query: 633 NNILLNSKLEAFVADFGTARL-LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFG 691
NIL+++ A++ DFG A D + GT Y APE T + D+Y+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALT 222
Query: 692 VVALEVLMGRHP 703
V E L G P
Sbjct: 223 CVLYECLTGSPP 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 604 VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-------------LEAFVADFGT 650
+++++ +A+ +++LH I+HRD+ NIL+++ L ++DFG
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 651 ARLLDSDS----SNRTIVAGTYGYIAPEL---AYTMVVTEKCDVYSFGVVALEVL-MGRH 702
+ LDS N +GT G+ APEL + +T D++S G V +L G+H
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 703 P 703
P
Sbjct: 253 P 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 604 VNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-------------LEAFVADFGT 650
+++++ +A+ +++LH I+HRD+ NIL+++ L ++DFG
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 651 ARLLDSDS----SNRTIVAGTYGYIAPEL---AYTMVVTEKCDVYSFGVVALEVL-MGRH 702
+ LDS N +GT G+ APEL + +T D++S G V +L G+H
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 703 P 703
P
Sbjct: 253 P 253
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 211 QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEI-GNMTGILK 269
Q + L N+ L +GGNKL S L LTNLTYL L N L S+P + +T + +
Sbjct: 57 QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKE 113
Query: 270 VDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPI 329
+ + N ++ +L+ L YL + N L L +L LDL NN+L
Sbjct: 114 LVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLP 173
Query: 330 PPEIGKCSELRNITLRNNNLSGSIP 354
K ++L+ ++L +N L S+P
Sbjct: 174 EGVFDKLTQLKQLSLNDNQLK-SVP 197
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 144 LRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDXXXXXXXXXXXX 203
L N+ L L GN L+ S+L +LT L + L+ N L +P+ + D
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFD------------ 106
Query: 204 XXXGMLHQELGKLKNLVALNVGGNKLMGPIPSTLF-RLTNLTYLYLHSNHLNGSIPPEI- 261
KL NL L + N+L +P +F +LTNLTYLYL+ N L S+P +
Sbjct: 107 -----------KLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVF 153
Query: 262 GNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLS 321
+T + ++D+ N ++ +L+QL LS++ N L L SL + L
Sbjct: 154 DKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLL 213
Query: 322 NN 323
NN
Sbjct: 214 NN 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 18 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 78 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 136
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 137 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 18 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 78 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 136
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 137 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 25/230 (10%)
Query: 487 GRIAFEDIIKA----TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETT-- 540
G A D+I + ++ I +G YG+V G VA+K++ ++ T
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVN 65
Query: 541 -FFNSFQ-----NEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRND 592
+SF E +L+ H NI+ L +H + M +Y + +R D
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE------LMRTD 119
Query: 593 YEAVVLDWTMRV---NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649
V+ D + + +I + + L LH +VHRD+ NILL + + DF
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179
Query: 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVL 698
AR D+ +N+T Y APEL T+ D++S G V E+
Sbjct: 180 LAR-EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 18 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y+ G +F LR
Sbjct: 78 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI- 136
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + V DFG A+
Sbjct: 137 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 25/230 (10%)
Query: 487 GRIAFEDIIKA----TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETT-- 540
G A D+I + ++ I +G YG+V G VA+K++ ++ T
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVN 65
Query: 541 -FFNSFQ-----NEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRND 592
+SF E +L+ H NI+ L +H + M +Y + +R D
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE------LMRTD 119
Query: 593 YEAVVLDWTMRV---NIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649
V+ D + + +I + + L LH +VHRD+ NILL + + DF
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179
Query: 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVL 698
AR D+ +N+T Y APEL T+ D++S G V E+
Sbjct: 180 LAR-EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 626 VHRDISSNNILLNSKLEAFVADFGTARLL--DSDSSNRTIVAGTYGYIAPELAYTMVVTE 683
+HRD+++ NILL+ + DFG AR + + D + ++APE + + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 684 KCDVYSFGVVALEVLM---GRHPGEXXXXXXXXXXDQKIMLIDVLDSRLSPPVDRMVMQD 740
K DV+S+GV+ E+ +PG + + + SRL + RM +
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSPYPG--------------VQMDEDFCSRLREGM-RMRAPE 325
Query: 741 IVL--VTTVALACLHSKPKFRPTMQRVCQEF 769
+ + L C H PK RP + ++
Sbjct: 326 YSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 507 IGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLY 564
IG+GG V++ ++ A+K ++ E + T +S++NE L+K+ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 565 GFCLHKKCMFLIYKYMKRGS--LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCM 622
+ + + ++++ M+ G+ L +L+ + +D R + K + A+ +H
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH-- 174
Query: 623 PSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV 680
IVH D+ N L+ + + DFG A + D+++ + G Y+ PE M
Sbjct: 175 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 681 VTEK-----------CDVYSFGVVALEVLMGRHP 703
+ + DV+S G + + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + + KL ++++ +Y G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFX 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT Y+AP +
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPAII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 106/248 (42%), Gaps = 49/248 (19%)
Query: 491 FEDIIKATEDFDIKYCIGTGGYGSVY--KAQLPNG--KVVALKKLHRAETEETTFFNSFQ 546
+E + + + F I+ IG G + SVY AQL G + +ALK L T+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLI-----PTSHPIRIA 67
Query: 547 NEAHVLSKIAHRNIVKLYGFCLHKKCMFLI-YKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
E L+ ++ V +C K +I Y++ S L + V ++ + N
Sbjct: 68 AELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML--N 125
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF-VADFGTA-----------RL 653
+ K AL +H IVHRD+ +N L N +L+ + + DFG A +
Sbjct: 126 LFK----ALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 654 LDSDS--------------SNRTIV---AGTYGYIAPE-LAYTMVVTEKCDVYSFGVVAL 695
+ S++ S R V AGT G+ APE L T D++S GV+ L
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 696 EVLMGRHP 703
+L GR+P
Sbjct: 239 SLLSGRYP 246
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 507 IGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565
IG+G G V A G VA+KKL R FQN+ H +K A+R +V L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRP----------FQNQTH--AKRAYRELVLLK- 78
Query: 566 FCL-HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA-----NALSYL-- 617
C+ HK + L+ + + +L F ++ Y + L M N+ + + +SYL
Sbjct: 79 -CVNHKNIISLLNVFTPQKTLEEF-QDVYLVMEL---MDANLCQVIHMELDHERMSYLLY 133
Query: 618 ------HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYI 671
H I+HRD+ +NI++ S + DFG AR ++ V Y Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-YR 192
Query: 672 APELAYTMVVTEKCDVYSFGVVALEVLMG 700
APE+ M D++S G + E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 215 KLKNLVALNVGGNKLMGPIPSTLFR-LTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMS 273
+L L L + NKL +P+ +F+ L NL L++ N L + + ++ +
Sbjct: 59 RLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117
Query: 274 MNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEI 333
N ++ P L++L YLS+ N L L SLK L L NN+L
Sbjct: 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177
Query: 334 GKCSELRNITLRNNNLSGSIPPEI--GLMKLEYLDLSHNKLNGTIPPFLY 381
K +EL+ + L NN L +P L KL+ L L N + T +Y
Sbjct: 178 DKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCNGIIY 226
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 32/241 (13%)
Query: 61 CKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQV-GA 119
CK DG C+ + ++ KKL S + L L+ N L S+PS+
Sbjct: 5 CKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADT----KKLDLQSNKL-SSLPSKAFHR 59
Query: 120 LSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179
L+KLR L + N L L+NLE L + N L QL L + L RN
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 180 GLHGPIPSAIGDXXXXXXXXXXXXXXXGMLHQELGKLKNLVALNVGGNKLMGPIPSTLF- 238
L +P + D L L L++G N+L +P +F
Sbjct: 120 QLKS-LPPRVFDS-----------------------LTKLTYLSLGYNELQS-LPKGVFD 154
Query: 239 RLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISS 298
+LT+L L L++N L +T + + + N ++ L +L L +
Sbjct: 155 KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214
Query: 299 N 299
N
Sbjct: 215 N 215
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + + KL ++++ +Y G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 490 AFEDIIKATED----------FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE 538
A ED +K E+ F+ +GTG +G V + + G A+K L + + +
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 539 TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598
NE +L + + KL ++++ +Y G +F LR
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFS 140
Query: 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658
+ R + V YLH +++RD+ N++++ + V DFG A+ + +
Sbjct: 141 EPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 197 ---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 18 EFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE + + +VKL ++++ +Y G +F LR
Sbjct: 78 QKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI- 136
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N+L++ + VADFG A+
Sbjct: 137 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR 191
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 494 IIKATEDFDIKYCIGTGGYG--SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV 551
I+ ++ +D IG+G +G + + +L ++VA+K + R + Q E
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERG----AAIDENVQREIIN 69
Query: 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVA 611
+ H NIV+ L + +I +Y G L+ + N A + +
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLL 126
Query: 612 NALSYLHHDCMPSIVHRDISSNNILLNSKLEAF--VADFGTARLLDSDSSNRTIVAGTYG 669
+ +SY H I HRD+ N LL+ + DFG ++ S ++ V GT
Sbjct: 127 SGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPA 182
Query: 670 YIAPELAYTMVVTEK-CDVYSFGVVALEVLMGRHPGE 705
YIAPE+ K DV+S GV +L+G +P E
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 493 DIIKATEDFDIKYCIGTGGYGSVYKA--QLPNGKVVALKKLHRAETEETTFFNSFQNEAH 550
DI+ +++K CI GG G +Y A + NG+ V LK L + + E
Sbjct: 76 DIVAG--QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL--VHSGDAEAQAMAMAERQ 131
Query: 551 VLSKIAHRNIVKLYGFCLHKK-----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVN 605
L+++ H +IV+++ F H +++ +Y+ SL + L +
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIA 186
Query: 606 IIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665
+ + ALSYLH +V+ D+ NI+L + + D G ++S +
Sbjct: 187 YLLEILPALSYLHSI---GLVYNDLKPENIMLTEEQLKLI-DLGAVSRINSFG----YLY 238
Query: 666 GTYGYIAPELAYTMVVTEKCDVYSFG 691
GT G+ APE+ T T D+Y+ G
Sbjct: 239 GTPGFQAPEIVRTG-PTVATDIYTVG 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 27/230 (11%)
Query: 492 EDIIKATEDFDIKY-----------------CIGTGGYGSVYKAQLPN-GKVVALKKLHR 533
E + KA EDF K+ +GTG +G V + G A+K L +
Sbjct: 18 EFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 534 AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY 593
+ + NE +L + +VKL ++++ +Y G +F LR
Sbjct: 78 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI- 136
Query: 594 EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653
+ R + V YLH +++RD+ N++++ + V DFG A+
Sbjct: 137 -GRFSEPHARFYAAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + + GT Y+APE+ + + D ++ GV+ E+ G P
Sbjct: 192 VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 117/302 (38%), Gaps = 45/302 (14%)
Query: 494 IIKATEDFDIKYCIGTGGYG-SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
I+ ++ +++ IG+G +G + + ++VA+K + R E + N
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH---- 68
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ H NIV+ L + ++ +Y G LF + N A + + +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 125
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAF--VADFGTARLLDSDSSNRTIVAGTYGY 670
+SY H + HRD+ N LL+ + DFG ++ S ++ V GT Y
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAY 181
Query: 671 IAPELAYTMVVTEK-CDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRL 729
IAPE+ K DV+S GV +L+G +P E
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE--------------------- 220
Query: 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLR 789
P R + I+ V +H P+ R L +I + +P + ISI ++R
Sbjct: 221 EPKNFRKTIHRILNVQYAIPDYVHISPECR---------HLISRIFVADPAKRISIPEIR 271
Query: 790 NQ 791
N
Sbjct: 272 NH 273
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH 557
+ FD +GTG +G V + +G A+K L + + + NE +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 558 RNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL 617
+VKL ++++ +Y+ G +F LR + R + V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL-TFEYL 157
Query: 618 HHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT-IVAGTYGYIAPELA 676
H +++RD+ N+L++ + V DFG A+ + RT + GT +APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEALAPEII 210
Query: 677 YTMVVTEKCDVYSFGVVALEVLMGRHP 703
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 496 KATEDFDIKYCIG----TGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQN--- 547
K E + +Y +G +GG+GSVY ++ + VA+K + E + + + N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV---EKDRISDWGELPNGTR 57
Query: 548 ---EAHVLSKIAH--RNIVKLYGFCLHKKCMFLIYKYMKR-GSLFCFLRNDYEAVVLDWT 601
E +L K++ +++L + LI + M+ LF F+ E L
Sbjct: 58 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEE 114
Query: 602 MRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKLEAFVADFGTARLLDSDSSN 660
+ + V A+ + H+C ++HRDI NIL++ ++ E + DFG+ LL +
Sbjct: 115 LARSFFWQVLEAVRHC-HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTV 169
Query: 661 RTIVAGTYGYIAPE-LAYTMVVTEKCDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKI 719
T GT Y PE + Y V+S G++ +++ G P E D++I
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---------HDEEI 220
Query: 720 MLIDV-LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRV 765
+ V R+S ++ CL +P RPT + +
Sbjct: 221 IRGQVFFRQRVSSECQHLIR-----------WCLALRPSDRPTFEEI 256
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 116/302 (38%), Gaps = 45/302 (14%)
Query: 494 IIKATEDFDIKYCIGTGGYG-SVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVL 552
I+ ++ +++ IG+G +G + + ++VA+K + R E N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH---- 69
Query: 553 SKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN 612
+ H NIV+ L + ++ +Y G LF + N A + + +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 126
Query: 613 ALSYLHHDCMPSIVHRDISSNNILLNSKLEAF--VADFGTARLLDSDSSNRTIVAGTYGY 670
+SY H + HRD+ N LL+ + DFG ++ S ++ V GT Y
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAY 182
Query: 671 IAPELAYTMVVTEK-CDVYSFGVVALEVLMGRHPGEXXXXXXXXXXDQKIMLIDVLDSRL 729
IAPE+ K DV+S GV +L+G +P E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE--------------------- 221
Query: 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLR 789
P R + I+ V +H P+ R L +I + +P + ISI ++R
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPECR---------HLISRIFVADPAKRISIPEIR 272
Query: 790 NQ 791
N
Sbjct: 273 NH 274
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,368,275
Number of Sequences: 62578
Number of extensions: 918464
Number of successful extensions: 4951
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 1847
Number of HSP's gapped (non-prelim): 1546
length of query: 796
length of database: 14,973,337
effective HSP length: 107
effective length of query: 689
effective length of database: 8,277,491
effective search space: 5703191299
effective search space used: 5703191299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)