Query 003780
Match_columns 796
No_of_seqs 794 out of 5591
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 11:54:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003780.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003780hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.5E-86 9.7E-91 812.6 52.0 720 26-774 27-953 (968)
2 KOG1187 Serine/threonine prote 100.0 7.3E-50 1.6E-54 427.3 26.2 283 486-774 62-354 (361)
3 KOG0575 Polo-like serine/threo 100.0 1.8E-46 3.9E-51 397.8 20.8 253 499-770 18-271 (592)
4 KOG0192 Tyrosine kinase specif 100.0 1E-45 2.2E-50 391.9 25.0 258 501-774 43-305 (362)
5 KOG0581 Mitogen-activated prot 100.0 1.6E-46 3.5E-51 376.9 17.5 257 501-773 81-340 (364)
6 KOG0615 Serine/threonine prote 100.0 8.4E-47 1.8E-51 380.6 15.2 259 497-770 170-439 (475)
7 KOG0595 Serine/threonine-prote 100.0 2.9E-44 6.4E-49 363.2 21.5 201 498-706 9-216 (429)
8 KOG0598 Ribosomal protein S6 k 100.0 2.1E-44 4.6E-49 361.6 18.9 246 498-761 24-270 (357)
9 KOG0591 NIMA (never in mitosis 100.0 5.5E-45 1.2E-49 349.4 10.6 260 499-771 19-284 (375)
10 KOG0593 Predicted protein kina 100.0 2.2E-43 4.7E-48 341.9 15.2 263 499-768 2-284 (396)
11 KOG0197 Tyrosine kinases [Sign 100.0 8.6E-43 1.9E-47 366.7 19.2 255 500-774 207-463 (468)
12 KOG0592 3-phosphoinositide-dep 100.0 9.5E-42 2.1E-46 355.4 19.7 257 497-772 71-342 (604)
13 KOG0582 Ste20-like serine/thre 100.0 3.3E-41 7.1E-46 343.4 23.2 258 498-769 25-294 (516)
14 KOG0578 p21-activated serine/t 100.0 1.4E-41 3.1E-46 357.7 16.7 252 499-770 273-525 (550)
15 KOG0659 Cdk activating kinase 100.0 7.3E-41 1.6E-45 319.4 17.5 258 499-768 2-281 (318)
16 KOG0597 Serine-threonine prote 100.0 2E-41 4.4E-46 352.4 14.6 250 499-769 2-252 (808)
17 KOG0198 MEKK and related serin 100.0 8.4E-41 1.8E-45 343.1 18.2 258 499-774 17-282 (313)
18 KOG0616 cAMP-dependent protein 100.0 1.3E-40 2.8E-45 322.3 18.1 239 499-759 44-283 (355)
19 KOG0600 Cdc2-related protein k 100.0 6.5E-41 1.4E-45 346.4 17.1 263 499-768 117-400 (560)
20 KOG0583 Serine/threonine prote 100.0 4.6E-40 1E-44 352.5 24.2 256 497-770 15-277 (370)
21 KOG1026 Nerve growth factor re 100.0 7.8E-41 1.7E-45 368.6 18.2 260 498-774 485-764 (774)
22 KOG0193 Serine/threonine prote 100.0 4E-41 8.7E-46 354.9 15.1 269 489-774 382-655 (678)
23 KOG0661 MAPK related serine/th 100.0 1.8E-41 3.9E-46 348.0 11.4 264 497-769 8-292 (538)
24 KOG0588 Serine/threonine prote 100.0 4E-40 8.7E-45 350.0 18.8 253 499-771 12-266 (786)
25 KOG0611 Predicted serine/threo 100.0 3.6E-40 7.8E-45 330.0 16.2 253 498-771 52-306 (668)
26 cd05102 PTKc_VEGFR3 Catalytic 100.0 3E-39 6.5E-44 350.0 22.6 261 497-773 5-335 (338)
27 PHA02988 hypothetical protein; 100.0 7.5E-39 1.6E-43 337.2 24.9 251 504-774 25-281 (283)
28 KOG4721 Serine/threonine prote 100.0 1.3E-40 2.7E-45 346.1 10.2 246 502-776 127-372 (904)
29 KOG0605 NDR and related serine 100.0 2.7E-39 5.8E-44 337.7 19.8 254 497-768 139-445 (550)
30 KOG0201 Serine/threonine prote 100.0 1.3E-40 2.8E-45 339.3 9.2 251 499-769 13-264 (467)
31 cd05631 STKc_GRK4 Catalytic do 100.0 5.2E-39 1.1E-43 339.3 21.4 256 500-769 1-262 (285)
32 KOG0585 Ca2+/calmodulin-depend 100.0 2.3E-39 5E-44 331.8 17.6 263 497-776 95-380 (576)
33 KOG0589 Serine/threonine prote 100.0 8.5E-40 1.8E-44 343.4 13.8 254 498-768 3-258 (426)
34 cd05571 STKc_PKB Catalytic dom 100.0 7.8E-39 1.7E-43 344.0 21.6 245 505-768 1-251 (323)
35 cd05612 STKc_PRKX_like Catalyt 100.0 7.8E-39 1.7E-43 338.9 20.8 249 499-769 1-255 (291)
36 KOG0580 Serine/threonine prote 100.0 1.4E-39 3.1E-44 306.2 13.3 254 498-770 21-275 (281)
37 KOG0194 Protein tyrosine kinas 100.0 3.7E-39 8.1E-44 345.3 16.7 265 496-776 154-424 (474)
38 cd05096 PTKc_DDR1 Catalytic do 100.0 3.5E-38 7.6E-43 336.4 24.1 263 499-771 5-304 (304)
39 PTZ00263 protein kinase A cata 100.0 1.4E-38 3E-43 342.8 21.2 248 499-768 18-271 (329)
40 KOG0033 Ca2+/calmodulin-depend 100.0 2.4E-40 5.2E-45 311.2 6.3 260 497-773 9-272 (355)
41 KOG0663 Protein kinase PITSLRE 100.0 7E-39 1.5E-43 314.8 16.5 256 499-768 76-361 (419)
42 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.7E-38 3.6E-43 343.3 21.2 256 499-769 1-258 (333)
43 cd05595 STKc_PKB_beta Catalyti 100.0 4.7E-38 1E-42 337.8 22.7 245 505-768 1-251 (323)
44 cd05585 STKc_YPK1_like Catalyt 100.0 3.7E-38 8E-43 337.2 21.7 243 507-768 1-247 (312)
45 KOG0660 Mitogen-activated prot 100.0 7.9E-39 1.7E-43 320.2 15.2 265 497-769 20-311 (359)
46 KOG0694 Serine/threonine prote 100.0 2.2E-38 4.7E-43 340.0 19.6 245 498-762 367-613 (694)
47 cd05593 STKc_PKB_gamma Catalyt 100.0 5.3E-38 1.2E-42 338.0 22.5 245 505-768 1-251 (328)
48 KOG2345 Serine/threonine prote 100.0 6E-39 1.3E-43 303.3 13.1 262 498-772 20-300 (302)
49 cd05618 STKc_aPKC_iota Catalyt 100.0 6.5E-38 1.4E-42 337.5 22.8 253 505-768 1-262 (329)
50 PTZ00426 cAMP-dependent protei 100.0 4.2E-38 9.1E-43 339.8 21.2 249 498-768 29-284 (340)
51 cd05104 PTKc_Kit Catalytic dom 100.0 7.5E-38 1.6E-42 342.8 23.4 258 498-771 34-373 (375)
52 cd05588 STKc_aPKC Catalytic do 100.0 7.9E-38 1.7E-42 337.0 22.9 253 505-768 1-262 (329)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-37 2.3E-42 329.8 23.0 262 499-768 5-285 (288)
54 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-38 3E-43 343.0 16.1 267 485-771 606-890 (996)
55 KOG1095 Protein tyrosine kinas 100.0 9.2E-38 2E-42 357.0 23.4 257 499-773 692-962 (1025)
56 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-37 2.4E-42 341.2 23.0 260 497-772 36-372 (374)
57 KOG0594 Protein kinase PCTAIRE 100.0 3.8E-38 8.1E-43 317.0 17.4 260 499-768 11-302 (323)
58 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.2E-37 4.8E-42 330.0 24.0 260 498-769 4-289 (303)
59 KOG1989 ARK protein kinase fam 100.0 6.6E-38 1.4E-42 347.6 20.5 266 498-784 36-322 (738)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 3.2E-37 6.9E-42 332.7 25.2 263 498-771 4-304 (331)
61 cd08228 STKc_Nek6 Catalytic do 100.0 3.9E-37 8.4E-42 321.9 25.1 263 499-773 2-266 (267)
62 PLN00113 leucine-rich repeat r 100.0 6.1E-38 1.3E-42 386.1 22.2 318 73-392 261-605 (968)
63 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-37 3.3E-42 328.6 22.1 258 499-768 1-284 (287)
64 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.2E-38 1.6E-42 341.1 20.2 253 499-769 1-286 (350)
65 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-37 2.9E-42 333.8 21.7 245 505-768 1-253 (320)
66 cd05607 STKc_GRK7 Catalytic do 100.0 1.9E-37 4.2E-42 325.9 22.0 256 507-775 1-257 (277)
67 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-37 2.8E-42 327.8 20.6 250 507-768 1-257 (280)
68 cd05628 STKc_NDR1 Catalytic do 100.0 2.2E-37 4.8E-42 338.3 23.3 253 499-768 1-293 (363)
69 cd05589 STKc_PKN Catalytic dom 100.0 2.3E-37 5E-42 332.9 22.9 248 501-768 1-257 (324)
70 cd05584 STKc_p70S6K Catalytic 100.0 2E-37 4.4E-42 333.0 22.3 246 505-769 2-257 (323)
71 cd05594 STKc_PKB_alpha Catalyt 100.0 9.3E-38 2E-42 336.1 19.6 245 505-768 1-252 (325)
72 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.5E-37 1.2E-41 318.6 24.6 250 499-769 4-255 (256)
73 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.7E-37 1.2E-41 320.4 24.7 255 499-772 5-265 (266)
74 PLN00034 mitogen-activated pro 100.0 8.6E-38 1.9E-42 340.3 19.3 250 499-769 74-329 (353)
75 PF07714 Pkinase_Tyr: Protein 100.0 1.7E-37 3.6E-42 322.9 20.4 249 503-769 3-259 (259)
76 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-37 3E-42 340.5 20.7 255 499-769 1-297 (364)
77 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-37 8.1E-42 331.3 23.5 250 500-768 1-257 (324)
78 KOG0599 Phosphorylase kinase g 100.0 3.7E-38 8E-43 300.8 13.7 256 498-769 16-284 (411)
79 cd05048 PTKc_Ror Catalytic Dom 100.0 6.7E-37 1.5E-41 323.0 24.7 256 499-771 5-282 (283)
80 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-37 2.8E-42 340.3 19.9 257 497-769 41-305 (370)
81 cd07862 STKc_CDK6 Catalytic do 100.0 2.7E-37 5.8E-42 327.3 21.4 258 499-768 1-287 (290)
82 KOG1094 Discoidin domain recep 100.0 9.4E-38 2E-42 326.3 17.4 264 498-772 537-804 (807)
83 cd05592 STKc_nPKC_theta_delta 100.0 3.5E-37 7.6E-42 330.0 22.5 245 505-768 1-248 (316)
84 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.7E-37 5.8E-42 322.0 21.0 256 497-771 4-260 (261)
85 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.7E-37 1.9E-41 319.2 24.9 263 499-773 2-266 (267)
86 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-37 4.9E-42 332.8 21.0 243 505-766 1-245 (323)
87 cd05626 STKc_LATS2 Catalytic d 100.0 3.3E-37 7.2E-42 339.0 22.7 253 500-769 2-306 (381)
88 cd05616 STKc_cPKC_beta Catalyt 100.0 3.9E-37 8.5E-42 330.9 22.7 250 500-768 1-257 (323)
89 cd05605 STKc_GRK4_like Catalyt 100.0 2.9E-37 6.3E-42 325.9 21.3 255 500-768 1-261 (285)
90 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-37 5.8E-42 335.0 21.3 262 500-769 1-291 (338)
91 cd05072 PTKc_Lyn Catalytic dom 100.0 9.1E-37 2E-41 318.0 24.4 254 498-771 5-260 (261)
92 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-37 4.8E-42 338.0 20.6 257 497-769 41-305 (370)
93 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-37 6.4E-42 331.6 21.2 246 505-769 1-255 (321)
94 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-37 1.4E-41 322.0 23.2 258 497-771 4-277 (277)
95 KOG0032 Ca2+/calmodulin-depend 100.0 5.5E-37 1.2E-41 328.3 22.8 257 497-770 33-295 (382)
96 cd05620 STKc_nPKC_delta Cataly 100.0 4.4E-37 9.6E-42 329.2 22.2 245 505-768 1-248 (316)
97 cd05629 STKc_NDR_like_fungal C 100.0 2.2E-37 4.9E-42 340.2 20.3 255 499-769 1-306 (377)
98 cd05068 PTKc_Frk_like Catalyti 100.0 1.5E-36 3.2E-41 316.4 25.4 254 498-771 5-260 (261)
99 PHA03212 serine/threonine kina 100.0 1.2E-36 2.5E-41 334.1 25.4 257 498-770 91-378 (391)
100 KOG3653 Transforming growth fa 100.0 2.4E-37 5.2E-42 317.4 18.4 268 499-777 210-508 (534)
101 cd08229 STKc_Nek7 Catalytic do 100.0 9.8E-37 2.1E-41 318.8 23.6 262 499-772 2-265 (267)
102 cd05049 PTKc_Trk Catalytic dom 100.0 1E-36 2.3E-41 321.0 23.9 256 498-770 4-279 (280)
103 PTZ00267 NIMA-related protein 100.0 1.2E-36 2.6E-41 343.4 25.9 251 500-768 68-323 (478)
104 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-36 2.7E-41 315.8 24.1 251 499-770 4-256 (256)
105 cd05602 STKc_SGK1 Catalytic do 100.0 4E-37 8.7E-42 331.2 21.0 250 505-773 1-252 (325)
106 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-36 2.4E-41 334.4 24.8 261 497-773 35-398 (400)
107 cd05604 STKc_SGK3 Catalytic do 100.0 2.9E-37 6.4E-42 332.2 19.9 249 505-772 1-251 (325)
108 cd05570 STKc_PKC Catalytic dom 100.0 6.3E-37 1.4E-41 328.5 22.2 245 505-768 1-252 (318)
109 cd05619 STKc_nPKC_theta Cataly 100.0 7.9E-37 1.7E-41 327.1 22.7 245 505-768 1-248 (316)
110 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-36 4.1E-41 326.7 25.8 262 498-770 4-301 (333)
111 cd08529 STKc_FA2-like Catalyti 100.0 2E-36 4.3E-41 314.3 25.0 252 500-768 1-253 (256)
112 cd06646 STKc_MAP4K5 Catalytic 100.0 7.9E-37 1.7E-41 319.6 22.0 255 498-769 8-266 (267)
113 cd05603 STKc_SGK2 Catalytic do 100.0 5.5E-37 1.2E-41 329.6 21.3 240 505-763 1-242 (321)
114 KOG0610 Putative serine/threon 100.0 7.3E-37 1.6E-41 309.5 20.6 255 499-768 77-392 (459)
115 PTZ00283 serine/threonine prot 100.0 9.4E-37 2E-41 344.1 23.9 256 497-768 30-297 (496)
116 cd05625 STKc_LATS1 Catalytic d 100.0 5E-37 1.1E-41 338.1 21.1 251 500-768 2-305 (382)
117 cd05601 STKc_CRIK Catalytic do 100.0 2.3E-37 5E-42 334.0 18.0 255 499-768 1-263 (330)
118 cd05033 PTKc_EphR Catalytic do 100.0 2.8E-36 6.1E-41 315.2 25.6 255 499-772 4-265 (266)
119 cd05614 STKc_MSK2_N N-terminal 100.0 8.9E-37 1.9E-41 329.7 22.5 255 500-769 1-268 (332)
120 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-36 4.6E-41 315.6 24.4 254 499-772 6-262 (263)
121 cd05054 PTKc_VEGFR Catalytic d 100.0 9.1E-37 2E-41 329.4 22.0 259 498-772 6-333 (337)
122 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-36 3.2E-41 326.8 23.6 252 505-768 1-260 (327)
123 cd05598 STKc_LATS Catalytic do 100.0 3.4E-37 7.4E-42 338.8 18.9 251 500-768 2-301 (376)
124 KOG0658 Glycogen synthase kina 100.0 1.1E-37 2.4E-42 312.5 13.6 252 500-768 25-306 (364)
125 cd05090 PTKc_Ror1 Catalytic do 100.0 2.7E-36 5.8E-41 318.4 24.7 256 499-771 5-282 (283)
126 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-37 7.7E-42 330.6 17.8 240 505-764 2-245 (318)
127 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-36 3E-41 326.4 22.4 245 500-763 1-247 (323)
128 cd05622 STKc_ROCK1 Catalytic d 100.0 9.9E-37 2.1E-41 333.2 21.4 262 492-769 36-305 (371)
129 PRK13184 pknD serine/threonine 100.0 2.5E-36 5.4E-41 348.3 25.6 261 499-772 2-290 (932)
130 cd05094 PTKc_TrkC Catalytic do 100.0 3E-36 6.5E-41 319.3 24.3 260 499-776 5-286 (291)
131 cd05108 PTKc_EGFR Catalytic do 100.0 2.3E-36 5E-41 324.1 23.7 256 499-774 7-270 (316)
132 cd05059 PTKc_Tec_like Catalyti 100.0 2.6E-36 5.6E-41 313.6 23.2 249 500-769 5-255 (256)
133 cd05093 PTKc_TrkB Catalytic do 100.0 3.7E-36 8E-41 318.2 24.6 259 499-775 5-282 (288)
134 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.4E-36 7.4E-41 313.5 23.7 254 497-771 4-259 (260)
135 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-36 5.1E-41 319.2 22.5 264 500-768 1-282 (285)
136 PF00069 Pkinase: Protein kina 100.0 1.3E-36 2.9E-41 316.4 20.2 255 501-768 1-257 (260)
137 cd06625 STKc_MEKK3_like Cataly 100.0 7.4E-36 1.6E-40 311.4 25.4 254 499-769 2-261 (263)
138 cd08219 STKc_Nek3 Catalytic do 100.0 5E-36 1.1E-40 311.2 24.0 251 500-768 1-252 (255)
139 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-36 1.1E-40 310.6 24.0 248 505-771 1-252 (252)
140 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-36 6.1E-41 325.2 22.6 258 499-769 1-267 (331)
141 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-36 2.3E-41 332.6 19.3 254 499-768 1-293 (360)
142 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.3E-36 1.6E-40 310.9 24.5 253 498-771 5-259 (260)
143 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.7E-36 1.2E-40 314.8 23.9 258 497-771 4-277 (277)
144 cd05632 STKc_GRK5 Catalytic do 100.0 4.1E-36 8.8E-41 317.2 22.8 255 500-768 1-261 (285)
145 KOG0574 STE20-like serine/thre 100.0 1.7E-38 3.7E-43 306.6 4.1 254 501-774 35-289 (502)
146 cd05111 PTK_HER3 Pseudokinase 100.0 7.4E-36 1.6E-40 314.2 24.5 256 499-774 7-270 (279)
147 cd05630 STKc_GRK6 Catalytic do 100.0 2.8E-36 6E-41 318.4 21.3 256 500-769 1-262 (285)
148 cd05071 PTKc_Src Catalytic dom 100.0 9.3E-36 2E-40 310.5 24.9 254 498-772 5-260 (262)
149 cd05116 PTKc_Syk Catalytic dom 100.0 8.4E-36 1.8E-40 309.9 24.4 247 506-772 2-255 (257)
150 cd05061 PTKc_InsR Catalytic do 100.0 8.4E-36 1.8E-40 315.4 24.6 260 497-773 4-279 (288)
151 cd06645 STKc_MAP4K3 Catalytic 100.0 3.4E-36 7.3E-41 314.8 21.3 253 499-768 9-265 (267)
152 cd08221 STKc_Nek9 Catalytic do 100.0 1.4E-35 3E-40 308.1 25.6 253 500-769 1-254 (256)
153 cd05053 PTKc_FGFR Catalytic do 100.0 4.8E-36 1E-40 318.2 22.6 259 497-772 10-291 (293)
154 cd05624 STKc_MRCK_beta Catalyt 100.0 2.8E-36 6.1E-41 325.2 21.0 257 499-768 1-266 (331)
155 cd05623 STKc_MRCK_alpha Cataly 100.0 3.6E-36 7.8E-41 324.6 21.8 257 499-768 1-266 (332)
156 cd06654 STKc_PAK1 Catalytic do 100.0 7.7E-36 1.7E-40 316.8 23.9 251 498-768 19-270 (296)
157 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.4E-36 1.2E-40 320.3 22.8 259 499-770 6-288 (309)
158 cd05045 PTKc_RET Catalytic dom 100.0 1E-35 2.2E-40 315.1 24.7 257 500-773 1-287 (290)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 5.4E-36 1.2E-40 316.1 22.4 256 499-771 5-282 (283)
160 cd05051 PTKc_DDR Catalytic dom 100.0 8.1E-36 1.7E-40 317.0 23.7 264 498-771 4-296 (296)
161 cd05035 PTKc_Axl_like Catalyti 100.0 1.5E-35 3.4E-40 310.8 25.6 256 501-772 1-272 (273)
162 cd05097 PTKc_DDR_like Catalyti 100.0 6.4E-36 1.4E-40 317.5 22.8 263 499-771 5-295 (295)
163 cd05089 PTKc_Tie1 Catalytic do 100.0 9.6E-36 2.1E-40 316.4 24.2 258 499-774 2-277 (297)
164 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-36 2.6E-41 328.3 17.5 244 507-768 1-253 (330)
165 cd07876 STKc_JNK2 Catalytic do 100.0 5E-36 1.1E-40 327.4 22.5 263 497-770 19-317 (359)
166 cd06637 STKc_TNIK Catalytic do 100.0 6.1E-36 1.3E-40 313.8 22.3 254 496-768 3-269 (272)
167 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-35 4E-40 310.1 25.7 256 501-772 1-271 (272)
168 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.9E-36 1.9E-40 327.0 24.1 260 497-772 35-399 (401)
169 cd05069 PTKc_Yes Catalytic dom 100.0 2.3E-35 4.9E-40 307.2 26.0 253 498-771 5-259 (260)
170 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.7E-36 1.9E-40 318.3 23.3 261 498-775 17-302 (307)
171 cd06613 STKc_MAP4K3_like Catal 100.0 1.8E-35 3.8E-40 308.4 25.1 255 498-768 2-260 (262)
172 cd06624 STKc_ASK Catalytic dom 100.0 1.7E-35 3.6E-40 309.7 24.7 257 496-768 5-265 (268)
173 cd05095 PTKc_DDR2 Catalytic do 100.0 1.2E-35 2.6E-40 315.6 23.8 263 499-771 5-296 (296)
174 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-35 2.6E-40 316.8 23.9 263 497-776 13-300 (304)
175 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-35 4.3E-40 311.0 25.2 255 499-771 1-256 (279)
176 cd05055 PTKc_PDGFR Catalytic d 100.0 1.6E-35 3.5E-40 315.2 24.8 258 498-772 34-301 (302)
177 KOG0667 Dual-specificity tyros 100.0 3.4E-36 7.4E-41 323.6 19.4 260 500-771 187-505 (586)
178 cd08223 STKc_Nek4 Catalytic do 100.0 2.6E-35 5.6E-40 306.2 25.5 252 500-768 1-254 (257)
179 cd05032 PTKc_InsR_like Catalyt 100.0 1.3E-35 2.7E-40 312.2 23.4 257 498-771 5-277 (277)
180 cd05109 PTKc_HER2 Catalytic do 100.0 1.9E-35 4E-40 311.3 24.7 263 498-781 6-276 (279)
181 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-35 4.9E-40 306.6 25.1 246 507-772 3-255 (257)
182 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-35 3.1E-40 312.4 23.8 259 498-773 5-277 (280)
183 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-35 3.7E-40 307.4 24.0 252 500-768 1-253 (256)
184 cd06612 STKc_MST1_2 Catalytic 100.0 1E-35 2.2E-40 309.0 22.3 250 499-768 3-253 (256)
185 cd05085 PTKc_Fer Catalytic dom 100.0 2.5E-35 5.4E-40 305.0 25.0 247 505-770 1-249 (250)
186 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.7E-35 3.7E-40 312.5 24.2 263 499-772 4-283 (284)
187 cd05034 PTKc_Src_like Catalyti 100.0 2.4E-35 5.1E-40 307.3 24.9 255 497-771 4-260 (261)
188 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-35 3.8E-40 311.6 24.2 255 499-771 5-280 (280)
189 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-35 2.5E-40 316.6 22.9 258 498-773 6-281 (303)
190 cd05039 PTKc_Csk_like Catalyti 100.0 2.8E-35 6.1E-40 305.8 25.3 250 498-771 5-255 (256)
191 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-35 3.8E-40 312.2 23.9 260 501-772 6-281 (283)
192 KOG2052 Activin A type IB rece 100.0 4.2E-35 9E-40 298.8 25.5 264 496-773 208-504 (513)
193 cd07853 STKc_NLK Catalytic dom 100.0 9.4E-36 2E-40 326.7 22.5 262 500-769 1-289 (372)
194 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.6E-35 3.4E-40 317.3 23.7 267 498-781 11-302 (314)
195 KOG4279 Serine/threonine prote 100.0 1.1E-36 2.3E-41 323.0 14.3 248 506-769 582-833 (1226)
196 PTZ00036 glycogen synthase kin 100.0 9.6E-36 2.1E-40 332.1 22.8 255 498-769 65-352 (440)
197 cd05050 PTKc_Musk Catalytic do 100.0 2E-35 4.4E-40 312.5 24.0 257 498-771 4-288 (288)
198 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-35 3.2E-40 311.2 22.6 251 499-769 1-252 (274)
199 cd05082 PTKc_Csk Catalytic dom 100.0 2.8E-35 6.1E-40 305.8 24.3 248 499-771 6-255 (256)
200 cd06655 STKc_PAK2 Catalytic do 100.0 2E-35 4.3E-40 313.6 23.4 251 499-769 19-270 (296)
201 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-35 2.3E-40 314.4 21.1 264 489-769 8-284 (286)
202 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-35 3.6E-40 320.9 23.1 260 498-773 6-340 (343)
203 cd07874 STKc_JNK3 Catalytic do 100.0 8.1E-36 1.8E-40 325.3 20.8 262 497-769 15-312 (355)
204 cd06631 STKc_YSK4 Catalytic do 100.0 3.5E-35 7.5E-40 306.8 24.7 252 500-768 1-262 (265)
205 cd05112 PTKc_Itk Catalytic dom 100.0 3.2E-35 7E-40 305.3 24.2 251 499-770 4-256 (256)
206 KOG0596 Dual specificity; seri 100.0 3.1E-36 6.7E-41 314.0 16.3 256 498-770 360-629 (677)
207 cd05066 PTKc_EphR_A Catalytic 100.0 3.7E-35 7.9E-40 307.0 24.6 255 499-772 4-266 (267)
208 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-35 3.5E-40 313.0 22.0 257 499-770 1-264 (286)
209 KOG0986 G protein-coupled rece 100.0 7.2E-37 1.6E-41 311.4 11.1 258 497-768 183-446 (591)
210 KOG4717 Serine/threonine prote 100.0 5.5E-36 1.2E-40 308.2 17.6 252 499-770 18-272 (864)
211 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-35 3.8E-40 314.3 22.1 252 498-769 18-270 (297)
212 cd00192 PTKc Catalytic domain 100.0 4E-35 8.7E-40 305.3 24.4 249 505-770 1-262 (262)
213 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.6E-35 1.2E-39 305.7 25.6 255 499-772 5-267 (268)
214 cd07868 STKc_CDK8 Catalytic do 100.0 2.7E-35 5.9E-40 316.1 23.6 194 504-706 6-218 (317)
215 cd05060 PTKc_Syk_like Catalyti 100.0 5.4E-35 1.2E-39 303.8 25.0 247 505-772 1-255 (257)
216 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.1E-35 8.9E-40 306.4 24.2 257 499-768 1-264 (267)
217 cd06644 STKc_STK10_LOK Catalyt 100.0 4.4E-35 9.6E-40 310.6 24.7 254 499-770 12-271 (292)
218 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-35 8E-40 313.5 24.2 262 499-771 1-290 (308)
219 cd05073 PTKc_Hck Catalytic dom 100.0 3.8E-35 8.3E-40 305.5 23.8 254 497-771 4-259 (260)
220 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.9E-35 1.3E-39 305.4 25.2 251 500-768 1-264 (267)
221 cd06640 STKc_MST4 Catalytic do 100.0 3.7E-35 8E-40 308.7 23.8 255 499-774 4-259 (277)
222 cd05574 STKc_phototropin_like 100.0 4.7E-35 1E-39 314.2 25.0 255 499-768 1-289 (316)
223 PTZ00266 NIMA-related protein 100.0 1.6E-35 3.4E-40 342.9 22.7 259 496-768 10-295 (1021)
224 cd07875 STKc_JNK1 Catalytic do 100.0 3E-35 6.4E-40 321.9 23.5 262 497-769 22-319 (364)
225 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.9E-35 8.5E-40 310.0 23.6 258 499-768 1-283 (286)
226 cd06639 STKc_myosinIIIB Cataly 100.0 2.9E-35 6.3E-40 311.9 22.5 263 489-768 12-287 (291)
227 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-35 7.6E-40 309.7 23.1 252 501-770 7-264 (282)
228 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-35 3.9E-40 312.9 20.9 257 500-768 1-285 (288)
229 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5E-35 1.1E-39 306.3 24.0 252 506-770 2-268 (269)
230 cd05040 PTKc_Ack_like Catalyti 100.0 5.7E-35 1.2E-39 303.6 23.8 248 505-770 1-256 (257)
231 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-35 4.1E-40 310.9 20.4 250 500-770 5-255 (277)
232 cd06651 STKc_MEKK3 Catalytic d 100.0 8E-35 1.7E-39 304.2 24.9 251 500-768 3-261 (266)
233 PTZ00284 protein kinase; Provi 100.0 1.9E-35 4.2E-40 333.6 21.7 263 494-770 124-440 (467)
234 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-35 5.3E-40 310.6 21.1 255 498-770 4-264 (280)
235 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.6E-35 7.9E-40 312.7 22.6 259 499-770 6-288 (301)
236 PHA03211 serine/threonine kina 100.0 5E-35 1.1E-39 324.7 24.3 256 498-768 168-455 (461)
237 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.8E-35 1.5E-39 307.8 24.3 263 500-772 5-283 (284)
238 cd08217 STKc_Nek2 Catalytic do 100.0 7.8E-35 1.7E-39 303.8 24.2 253 500-768 1-262 (265)
239 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.9E-35 6.3E-40 310.7 21.0 259 499-769 5-267 (284)
240 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.5E-35 1.4E-39 315.4 24.1 260 498-774 11-295 (334)
241 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2E-35 4.3E-40 320.7 20.1 262 496-769 12-299 (343)
242 cd08528 STKc_Nek10 Catalytic d 100.0 1.1E-34 2.3E-39 303.8 24.6 256 500-770 1-268 (269)
243 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-34 2.4E-39 300.4 24.5 247 505-770 1-250 (251)
244 cd08227 PK_STRAD_alpha Pseudok 100.0 6.7E-35 1.4E-39 314.3 23.7 262 503-769 2-308 (327)
245 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.2E-35 1.1E-39 308.4 22.2 261 489-768 6-279 (282)
246 cd05065 PTKc_EphR_B Catalytic 100.0 1E-34 2.2E-39 304.0 24.1 255 499-772 4-268 (269)
247 cd05580 STKc_PKA Catalytic dom 100.0 8.8E-35 1.9E-39 308.0 23.8 248 499-768 1-254 (290)
248 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.1E-35 6.8E-40 310.8 20.0 258 499-768 1-283 (286)
249 cd06626 STKc_MEKK4 Catalytic d 100.0 1.2E-34 2.6E-39 302.5 24.1 253 500-768 1-261 (264)
250 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-34 2.5E-39 302.3 23.8 249 505-772 1-259 (262)
251 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-34 2.9E-39 303.2 24.4 250 505-772 1-268 (270)
252 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-34 2.6E-39 302.0 23.8 240 505-770 1-262 (262)
253 cd06658 STKc_PAK5 Catalytic do 100.0 3E-35 6.4E-40 311.6 19.2 249 500-768 23-272 (292)
254 PHA03207 serine/threonine kina 100.0 3.7E-35 8E-40 323.7 20.7 256 498-770 91-377 (392)
255 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-34 3.7E-39 299.8 24.5 251 500-768 1-253 (256)
256 KOG0584 Serine/threonine prote 100.0 5.9E-36 1.3E-40 318.3 13.5 248 503-769 44-297 (632)
257 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.3E-34 2.7E-39 305.8 23.7 264 499-772 4-283 (284)
258 KOG0577 Serine/threonine prote 100.0 4.7E-36 1E-40 313.3 12.4 253 501-774 28-284 (948)
259 cd06632 STKc_MEKK1_plant Catal 100.0 1.4E-34 3.1E-39 300.7 23.6 251 500-768 1-255 (258)
260 cd07867 STKc_CDC2L6 Catalytic 100.0 1.3E-34 2.7E-39 311.0 23.9 193 505-706 7-218 (317)
261 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-34 3.4E-39 306.2 24.2 258 499-768 5-288 (291)
262 cd06623 PKc_MAPKK_plant_like C 100.0 2.4E-34 5.1E-39 300.1 25.1 254 499-768 1-256 (264)
263 cd06605 PKc_MAPKK Catalytic do 100.0 3.4E-35 7.4E-40 306.8 18.8 255 499-768 1-257 (265)
264 cd07839 STKc_CDK5 Catalytic do 100.0 5E-35 1.1E-39 308.9 20.2 258 500-768 1-281 (284)
265 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-34 5.4E-39 300.3 25.1 252 499-768 2-261 (265)
266 cd05042 PTKc_Aatyk Catalytic d 100.0 1.5E-34 3.1E-39 302.8 23.2 250 506-769 2-267 (269)
267 cd06608 STKc_myosinIII_like Ca 100.0 7.8E-35 1.7E-39 305.7 20.8 255 497-768 4-272 (275)
268 cd05046 PTK_CCK4 Pseudokinase 100.0 2.1E-34 4.7E-39 302.6 24.1 256 499-770 5-274 (275)
269 KOG4278 Protein tyrosine kinas 100.0 1.3E-35 2.9E-40 311.0 14.7 257 498-774 266-525 (1157)
270 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-34 3.8E-39 299.5 23.1 247 499-771 6-253 (254)
271 cd05609 STKc_MAST Catalytic do 100.0 2.1E-34 4.5E-39 307.4 24.1 256 499-770 1-272 (305)
272 cd08225 STKc_Nek5 Catalytic do 100.0 1.3E-34 2.8E-39 300.9 21.9 252 500-768 1-254 (257)
273 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.9E-34 4.2E-39 302.4 23.3 255 500-768 2-269 (272)
274 cd06641 STKc_MST3 Catalytic do 100.0 3.8E-34 8.2E-39 301.0 25.6 249 500-769 5-254 (277)
275 cd06630 STKc_MEKK1 Catalytic d 100.0 1.4E-34 3E-39 302.7 22.0 255 500-768 1-264 (268)
276 cd05057 PTKc_EGFR_like Catalyt 100.0 3E-34 6.5E-39 302.1 24.6 256 499-774 7-270 (279)
277 cd06659 STKc_PAK6 Catalytic do 100.0 7.6E-35 1.7E-39 309.2 20.1 248 502-769 24-272 (297)
278 cd05056 PTKc_FAK Catalytic dom 100.0 3.3E-34 7.2E-39 300.2 24.6 255 499-773 6-266 (270)
279 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-35 5.4E-40 332.8 16.8 254 497-768 477-871 (1351)
280 cd07841 STKc_CDK7 Catalytic do 100.0 2.3E-34 5E-39 306.1 23.3 258 500-768 1-282 (298)
281 PHA03209 serine/threonine kina 100.0 1.5E-34 3.2E-39 314.9 22.3 192 497-704 64-256 (357)
282 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-34 2.6E-39 306.0 20.8 258 500-768 1-281 (284)
283 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.6E-34 1E-38 301.9 25.2 260 499-769 1-267 (287)
284 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.4E-34 5.1E-39 299.3 22.5 238 505-770 1-259 (259)
285 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-34 4.2E-39 302.4 22.0 239 506-770 2-274 (274)
286 cd05044 PTKc_c-ros Catalytic d 100.0 1.9E-34 4.2E-39 301.8 21.9 250 505-771 1-269 (269)
287 cd05110 PTKc_HER4 Catalytic do 100.0 2.6E-34 5.7E-39 306.2 23.0 255 499-773 7-269 (303)
288 smart00219 TyrKc Tyrosine kina 100.0 5.3E-34 1.2E-38 296.3 24.8 251 501-769 1-258 (258)
289 cd06647 STKc_PAK_I Catalytic d 100.0 2.2E-34 4.7E-39 305.2 21.8 250 499-768 19-269 (293)
290 cd06607 STKc_TAO Catalytic dom 100.0 6.7E-34 1.5E-38 303.7 25.8 254 498-772 14-271 (307)
291 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.1E-34 1.3E-38 298.8 24.9 256 501-772 1-272 (273)
292 cd06648 STKc_PAK_II Catalytic 100.0 4.2E-34 9.1E-39 301.8 23.6 250 500-769 20-270 (285)
293 cd05578 STKc_Yank1 Catalytic d 100.0 7.5E-35 1.6E-39 303.0 17.5 251 500-767 1-254 (258)
294 cd06917 STKc_NAK1_like Catalyt 100.0 3.6E-34 7.8E-39 301.2 22.8 251 500-770 2-257 (277)
295 cd07833 STKc_CDKL Catalytic do 100.0 2.2E-34 4.8E-39 304.6 21.3 258 499-768 1-285 (288)
296 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.5E-34 1.2E-38 302.1 24.4 260 497-768 3-288 (291)
297 KOG0690 Serine/threonine prote 100.0 1E-35 2.2E-40 290.5 9.7 253 497-768 166-424 (516)
298 cd05572 STKc_cGK_PKG Catalytic 100.0 4.3E-34 9.2E-39 298.0 22.7 246 507-768 1-252 (262)
299 cd07836 STKc_Pho85 Catalytic d 100.0 4.5E-34 9.7E-39 301.6 23.1 258 500-768 1-281 (284)
300 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.4E-34 3E-39 301.0 18.8 240 505-770 1-258 (258)
301 cd05577 STKc_GRK Catalytic dom 100.0 2.2E-34 4.9E-39 302.7 20.6 248 507-768 1-254 (277)
302 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.6E-34 1E-38 298.7 22.9 251 506-770 2-267 (268)
303 KOG0983 Mitogen-activated prot 100.0 5.4E-35 1.2E-39 279.5 14.2 252 502-770 95-351 (391)
304 cd07832 STKc_CCRK Catalytic do 100.0 4.9E-34 1.1E-38 301.6 23.3 257 500-768 1-282 (286)
305 cd06614 STKc_PAK Catalytic dom 100.0 5.4E-34 1.2E-38 301.4 23.2 255 497-770 17-272 (286)
306 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.3E-34 1.4E-38 300.3 23.5 255 499-769 1-262 (283)
307 cd07842 STKc_CDK8_like Catalyt 100.0 4.1E-34 8.8E-39 306.9 22.2 265 500-768 1-313 (316)
308 KOG0586 Serine/threonine prote 100.0 1.1E-34 2.4E-39 308.4 17.3 252 498-770 55-308 (596)
309 cd07835 STKc_CDK1_like Catalyt 100.0 2.9E-34 6.4E-39 302.9 20.3 257 501-768 1-280 (283)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 5.1E-34 1.1E-38 302.6 22.2 256 499-768 5-290 (293)
311 cd05122 PKc_STE Catalytic doma 100.0 1.2E-33 2.6E-38 292.3 24.0 250 500-768 1-251 (253)
312 cd06635 STKc_TAO1 Catalytic do 100.0 2.1E-33 4.5E-38 301.2 26.5 256 500-776 26-285 (317)
313 PLN00009 cyclin-dependent kina 100.0 7.9E-34 1.7E-38 301.3 23.0 259 499-768 2-284 (294)
314 KOG4257 Focal adhesion tyrosin 100.0 8.4E-35 1.8E-39 305.8 15.1 257 497-773 387-650 (974)
315 KOG1025 Epidermal growth facto 100.0 1.7E-34 3.7E-39 312.3 17.8 252 502-773 699-958 (1177)
316 cd07837 STKc_CdkB_plant Cataly 100.0 7.4E-34 1.6E-38 301.8 22.6 260 499-768 1-291 (295)
317 KOG4194 Membrane glycoprotein 100.0 3.6E-36 7.8E-41 314.4 3.9 306 99-405 127-440 (873)
318 cd06606 STKc_MAPKKK Catalytic 100.0 2.5E-33 5.4E-38 291.2 25.0 252 500-768 1-257 (260)
319 KOG0579 Ste20-like serine/thre 100.0 1.8E-35 3.9E-40 310.6 8.8 260 499-776 32-297 (1187)
320 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-33 2.3E-38 297.7 22.2 246 506-769 1-256 (279)
321 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-33 6E-38 290.2 24.8 250 500-768 1-251 (254)
322 KOG0199 ACK and related non-re 100.0 1.8E-34 3.8E-39 307.1 15.5 250 501-769 112-369 (1039)
323 cd08215 STKc_Nek Catalytic dom 100.0 3.2E-33 7E-38 290.2 24.6 253 500-768 1-255 (258)
324 cd06616 PKc_MKK4 Catalytic dom 100.0 9E-34 1.9E-38 300.0 20.6 257 500-770 5-269 (288)
325 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-33 3E-38 292.9 21.7 251 500-768 1-253 (256)
326 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-33 2.6E-38 299.2 21.1 245 504-768 25-270 (292)
327 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.3E-33 9.3E-38 290.8 24.9 252 499-768 2-261 (264)
328 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-34 2E-38 306.6 20.6 267 498-772 4-297 (337)
329 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-35 4.2E-40 335.1 7.1 257 497-771 1233-1497(1509)
330 cd07850 STKc_JNK Catalytic dom 100.0 2.6E-33 5.6E-38 305.2 23.5 262 497-769 14-312 (353)
331 cd05579 STKc_MAST_like Catalyt 100.0 1.4E-33 3.1E-38 294.3 20.5 247 507-770 1-256 (265)
332 cd07845 STKc_CDK10 Catalytic d 100.0 2.1E-33 4.5E-38 300.3 22.2 261 498-770 6-292 (309)
333 cd05611 STKc_Rim15_like Cataly 100.0 2.3E-33 5.1E-38 292.1 21.9 244 505-767 2-247 (260)
334 KOG4194 Membrane glycoprotein 100.0 1.2E-35 2.5E-40 310.6 4.2 311 71-382 124-438 (873)
335 PHA03390 pk1 serine/threonine- 100.0 3.6E-33 7.8E-38 291.6 22.9 251 491-768 6-262 (267)
336 cd07855 STKc_ERK5 Catalytic do 100.0 1E-33 2.3E-38 306.0 19.0 265 498-770 4-296 (334)
337 cd05581 STKc_PDK1 Catalytic do 100.0 1.6E-33 3.4E-38 296.7 19.8 251 499-768 1-277 (280)
338 KOG0607 MAP kinase-interacting 100.0 5.8E-34 1.3E-38 277.9 14.9 266 490-769 74-362 (463)
339 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-33 2.8E-38 305.5 19.4 261 498-768 4-292 (336)
340 cd05118 STKc_CMGC Catalytic do 100.0 3.9E-33 8.6E-38 294.2 22.2 256 501-768 1-280 (283)
341 cd07831 STKc_MOK Catalytic dom 100.0 5.9E-33 1.3E-37 292.7 23.4 253 501-768 1-279 (282)
342 cd07838 STKc_CDK4_6_like Catal 100.0 8.6E-33 1.9E-37 292.2 24.6 256 501-768 1-284 (287)
343 KOG0666 Cyclin C-dependent kin 100.0 2.5E-34 5.4E-39 279.7 11.7 267 498-769 23-338 (438)
344 cd06618 PKc_MKK7 Catalytic dom 100.0 4.7E-33 1E-37 295.6 22.7 256 498-770 14-275 (296)
345 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.9E-33 8.4E-38 300.2 21.9 262 495-768 6-288 (328)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 7.3E-33 1.6E-37 298.6 23.8 253 505-770 4-310 (328)
347 PHA03210 serine/threonine kina 100.0 2.1E-33 4.5E-38 318.0 20.1 266 497-769 146-455 (501)
348 cd06634 STKc_TAO2 Catalytic do 100.0 7.1E-33 1.5E-37 295.8 23.1 254 499-773 15-272 (308)
349 cd07865 STKc_CDK9 Catalytic do 100.0 6.5E-33 1.4E-37 296.7 22.9 259 498-768 11-307 (310)
350 PHA02882 putative serine/threo 100.0 7.3E-33 1.6E-37 293.6 23.0 260 498-769 11-293 (294)
351 cd07857 STKc_MPK1 Catalytic do 100.0 6.6E-33 1.4E-37 299.4 22.9 288 500-795 1-331 (332)
352 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-32 3.7E-37 293.5 25.8 248 501-769 23-274 (313)
353 cd07864 STKc_CDK12 Catalytic d 100.0 7E-33 1.5E-37 295.3 22.3 261 496-768 4-299 (302)
354 cd07840 STKc_CDK9_like Catalyt 100.0 8.4E-33 1.8E-37 292.2 22.7 256 501-768 1-284 (287)
355 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.7E-33 1.9E-37 299.8 23.0 267 491-769 9-301 (345)
356 cd05606 STKc_beta_ARK Catalyti 100.0 1E-32 2.2E-37 290.1 22.7 246 506-769 1-256 (278)
357 cd08216 PK_STRAD Pseudokinase 100.0 8.9E-33 1.9E-37 296.2 22.5 253 504-770 7-297 (314)
358 cd07852 STKc_MAPK15 Catalytic 100.0 2.9E-33 6.3E-38 302.9 18.7 263 497-768 5-295 (337)
359 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-32 3.1E-37 291.1 23.5 254 500-768 1-268 (290)
360 KOG0604 MAP kinase-activated p 100.0 7.3E-34 1.6E-38 275.3 12.0 257 497-771 59-325 (400)
361 KOG4250 TANK binding protein k 100.0 9.5E-34 2.1E-38 305.1 14.1 201 501-707 15-227 (732)
362 cd07834 STKc_MAPK Catalytic do 100.0 4.3E-33 9.3E-38 300.9 19.4 261 500-768 1-289 (330)
363 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-32 3.8E-37 290.1 22.6 257 500-771 1-266 (288)
364 cd05123 STKc_AGC Catalytic dom 100.0 1.5E-32 3.3E-37 284.1 21.5 239 507-764 1-240 (250)
365 cd08222 STKc_Nek11 Catalytic d 100.0 9.6E-33 2.1E-37 287.4 20.1 253 500-768 1-257 (260)
366 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-32 2.6E-37 298.5 21.3 258 498-773 14-304 (342)
367 PTZ00024 cyclin-dependent prot 100.0 1.5E-32 3.2E-37 297.2 21.8 261 498-770 7-315 (335)
368 cd07830 STKc_MAK_like Catalyti 100.0 1.5E-32 3.2E-37 289.9 21.1 260 501-768 1-280 (283)
369 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-32 3.2E-37 297.8 21.3 260 497-768 13-298 (343)
370 cd05610 STKc_MASTL Catalytic d 100.0 3E-32 6.6E-37 318.0 24.9 149 498-652 3-152 (669)
371 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-32 2.6E-37 294.8 19.7 259 498-768 7-308 (311)
372 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-32 2.7E-37 290.2 19.4 261 501-768 1-279 (282)
373 KOG1006 Mitogen-activated prot 100.0 1.6E-34 3.4E-39 275.4 3.3 253 504-769 69-328 (361)
374 KOG0612 Rho-associated, coiled 100.0 1.3E-33 2.7E-38 316.5 11.0 259 493-769 69-339 (1317)
375 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-32 2.8E-37 298.4 17.4 256 497-769 13-299 (343)
376 KOG0587 Traf2- and Nck-interac 100.0 4.5E-32 9.8E-37 297.5 19.4 263 490-770 10-284 (953)
377 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.8E-32 1E-36 293.8 19.3 260 498-768 4-300 (342)
378 KOG0696 Serine/threonine prote 100.0 8.4E-33 1.8E-37 277.8 12.2 243 499-760 349-593 (683)
379 KOG4236 Serine/threonine prote 100.0 4.2E-33 9.1E-38 287.6 10.2 248 504-769 569-820 (888)
380 KOG0200 Fibroblast/platelet-de 100.0 1.2E-31 2.6E-36 308.1 21.7 259 498-772 295-579 (609)
381 KOG0695 Serine/threonine prote 100.0 4.3E-32 9.2E-37 266.0 14.6 252 498-760 249-502 (593)
382 KOG1151 Tousled-like protein k 100.0 8.3E-33 1.8E-37 280.0 9.3 258 497-768 461-741 (775)
383 KOG0603 Ribosomal protein S6 k 100.0 3.9E-32 8.4E-37 290.7 14.9 244 497-771 320-566 (612)
384 cd05576 STKc_RPK118_like Catal 100.0 2.9E-31 6.3E-36 272.1 17.7 220 510-763 4-224 (237)
385 KOG0662 Cyclin-dependent kinas 100.0 1.8E-31 3.9E-36 239.8 13.7 197 500-703 3-201 (292)
386 KOG0671 LAMMER dual specificit 100.0 5.3E-32 1.1E-36 271.8 9.3 257 496-769 86-407 (415)
387 KOG0614 cGMP-dependent protein 100.0 4.7E-32 1E-36 279.3 7.5 255 499-771 420-680 (732)
388 KOG0669 Cyclin T-dependent kin 100.0 1.7E-32 3.6E-37 259.4 3.6 264 499-770 17-317 (376)
389 KOG1024 Receptor-like protein 100.0 7.2E-31 1.6E-35 262.8 14.1 265 491-772 276-555 (563)
390 PLN03224 probable serine/threo 100.0 5.1E-30 1.1E-34 283.9 20.2 268 497-770 143-502 (507)
391 smart00220 S_TKc Serine/Threon 100.0 8.9E-30 1.9E-34 261.5 20.6 240 511-768 1-241 (244)
392 PLN03225 Serine/threonine-prot 100.0 2.2E-30 4.8E-35 294.6 17.6 262 497-769 130-451 (566)
393 KOG0444 Cytoskeletal regulator 100.0 3.6E-33 7.8E-38 293.3 -5.2 293 72-372 32-328 (1255)
394 KOG1027 Serine/threonine prote 100.0 1.3E-30 2.7E-35 284.9 9.4 246 501-769 511-768 (903)
395 KOG0984 Mitogen-activated prot 100.0 5.8E-30 1.3E-34 235.7 11.3 201 499-705 46-253 (282)
396 KOG0608 Warts/lats-like serine 100.0 2.6E-29 5.6E-34 264.9 16.6 205 499-709 629-876 (1034)
397 KOG0668 Casein kinase II, alph 100.0 6E-30 1.3E-34 238.9 9.0 252 497-768 36-322 (338)
398 KOG0444 Cytoskeletal regulator 100.0 1.3E-31 2.7E-36 281.7 -2.8 312 73-393 56-374 (1255)
399 KOG0664 Nemo-like MAPK-related 100.0 1.5E-30 3.2E-35 248.7 3.1 263 500-770 54-345 (449)
400 KOG1152 Signal transduction se 100.0 3.7E-29 8E-34 262.0 10.0 201 497-705 559-770 (772)
401 KOG1290 Serine/threonine prote 100.0 7.9E-28 1.7E-32 248.0 19.0 133 498-638 77-222 (590)
402 KOG0665 Jun-N-terminal kinase 100.0 6.2E-29 1.3E-33 244.0 10.2 258 499-769 17-311 (369)
403 cd00180 PKc Catalytic domain o 100.0 4.1E-27 8.8E-32 235.9 21.6 212 507-769 1-215 (215)
404 KOG0576 Mitogen-activated prot 99.9 8.8E-29 1.9E-33 263.5 5.4 254 498-768 14-271 (829)
405 KOG1345 Serine/threonine kinas 99.9 1.3E-27 2.7E-32 229.0 7.9 253 498-769 23-288 (378)
406 KOG0670 U4/U6-associated splic 99.9 9.1E-28 2E-32 248.4 7.3 210 487-706 420-637 (752)
407 smart00221 STYKc Protein kinas 99.9 1.4E-25 3E-30 227.7 21.7 198 501-705 1-201 (225)
408 KOG0472 Leucine-rich repeat pr 99.9 8.5E-29 1.9E-33 248.9 -8.7 293 93-395 156-519 (565)
409 KOG1167 Serine/threonine prote 99.9 5.9E-26 1.3E-30 231.8 10.8 263 494-770 31-383 (418)
410 PLN00181 protein SPA1-RELATED; 99.9 1.3E-25 2.9E-30 269.0 9.3 197 554-770 28-267 (793)
411 smart00750 KIND kinase non-cat 99.9 2.6E-24 5.6E-29 209.7 15.9 168 583-773 1-170 (176)
412 KOG0472 Leucine-rich repeat pr 99.9 2.6E-27 5.7E-32 238.2 -8.0 263 99-373 47-310 (565)
413 KOG0195 Integrin-linked kinase 99.9 1.9E-24 4.1E-29 207.0 7.5 249 502-772 193-446 (448)
414 KOG4237 Extracellular matrix p 99.9 9E-26 2E-30 227.2 -2.4 295 75-373 49-359 (498)
415 PRK15387 E3 ubiquitin-protein 99.9 2.7E-23 5.8E-28 237.9 14.1 262 97-401 201-465 (788)
416 PLN03210 Resistant to P. syrin 99.9 1.4E-22 3E-27 250.2 21.0 318 72-400 532-864 (1153)
417 PRK15387 E3 ubiquitin-protein 99.9 7.1E-23 1.5E-27 234.5 15.2 265 74-383 203-468 (788)
418 KOG4237 Extracellular matrix p 99.9 4.1E-25 9E-30 222.4 -3.1 279 72-351 67-360 (498)
419 KOG0618 Serine/threonine phosp 99.9 2.1E-24 4.5E-29 238.6 1.2 268 97-372 219-488 (1081)
420 PRK09188 serine/threonine prot 99.9 1.5E-22 3.3E-27 215.1 14.9 169 495-679 14-195 (365)
421 KOG1164 Casein kinase (serine/ 99.9 2.7E-21 5.8E-26 206.8 19.4 274 500-789 19-314 (322)
422 COG0515 SPS1 Serine/threonine 99.9 1.4E-20 3E-25 202.8 23.5 258 501-768 2-275 (384)
423 KOG0618 Serine/threonine phosp 99.9 4.5E-24 9.8E-29 236.0 -3.8 288 93-392 195-487 (1081)
424 KOG0590 Checkpoint kinase and 99.9 1.8E-22 4E-27 228.7 7.8 255 503-768 322-585 (601)
425 PLN03210 Resistant to P. syrin 99.9 6.9E-21 1.5E-25 235.2 21.7 289 93-395 584-884 (1153)
426 PRK15370 E3 ubiquitin-protein 99.9 7.3E-22 1.6E-26 227.9 10.6 245 98-373 179-428 (754)
427 PRK15370 E3 ubiquitin-protein 99.9 1.6E-21 3.4E-26 225.2 12.6 269 67-374 174-446 (754)
428 KOG1163 Casein kinase (serine/ 99.9 8.1E-21 1.8E-25 179.5 14.6 278 497-790 13-302 (341)
429 KOG1240 Protein kinase contain 99.8 1.2E-21 2.7E-26 220.0 6.4 252 500-774 24-297 (1431)
430 PRK10359 lipopolysaccharide co 99.8 2.4E-20 5.1E-25 184.0 13.1 188 483-698 13-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 5.4E-20 1.2E-24 180.1 11.9 143 504-655 2-168 (190)
432 KOG1165 Casein kinase (serine/ 99.8 4.6E-19 9.9E-24 175.3 17.8 254 499-768 28-295 (449)
433 PF14531 Kinase-like: Kinase-l 99.8 1.3E-19 2.7E-24 184.3 13.8 236 500-759 13-288 (288)
434 PRK12274 serine/threonine prot 99.8 3E-19 6.5E-24 172.1 15.2 187 501-705 4-208 (218)
435 cd00116 LRR_RI Leucine-rich re 99.8 6.3E-22 1.4E-26 212.6 -5.5 208 165-372 77-319 (319)
436 cd05145 RIO1_like RIO kinase f 99.8 6.3E-19 1.4E-23 173.3 15.7 143 504-656 2-169 (190)
437 cd00116 LRR_RI Leucine-rich re 99.8 8.6E-22 1.9E-26 211.6 -5.3 274 76-349 2-319 (319)
438 KOG1023 Natriuretic peptide re 99.8 3.7E-19 8.1E-24 192.1 13.1 214 552-775 1-227 (484)
439 KOG0617 Ras suppressor protein 99.8 5.4E-21 1.2E-25 171.4 -3.0 163 117-308 29-191 (264)
440 KOG4158 BRPK/PTEN-induced prot 99.8 4.5E-19 9.8E-24 179.1 9.4 252 499-769 157-511 (598)
441 KOG0603 Ribosomal protein S6 k 99.8 3.9E-20 8.4E-25 199.0 1.1 236 507-772 2-243 (612)
442 KOG0617 Ras suppressor protein 99.8 4.2E-20 9.2E-25 165.7 -1.8 164 168-337 32-196 (264)
443 KOG1166 Mitotic checkpoint ser 99.7 6.4E-18 1.4E-22 194.9 13.0 250 494-773 693-954 (974)
444 PRK10345 hypothetical protein; 99.7 4.5E-17 9.8E-22 160.7 14.8 136 502-651 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 9.9E-17 2.1E-21 162.5 13.1 152 493-655 22-199 (237)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.3E-17 2.8E-22 176.3 4.9 177 571-768 329-512 (516)
447 cd05144 RIO2_C RIO kinase fami 99.7 2.3E-16 5E-21 156.5 12.4 148 492-655 8-176 (198)
448 PRK14879 serine/threonine prot 99.7 4.1E-16 8.9E-21 156.6 14.2 137 505-653 2-143 (211)
449 KOG0606 Microtubule-associated 99.7 1.1E-16 2.5E-21 180.6 7.6 207 498-760 82-304 (1205)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 1.1E-15 2.4E-20 152.0 13.6 133 506-653 1-138 (199)
451 PRK09605 bifunctional UGMP fam 99.6 9.4E-16 2E-20 175.4 13.9 142 497-654 331-477 (535)
452 cd05119 RIO RIO kinase family, 99.6 7.4E-15 1.6E-19 144.4 12.1 140 504-656 2-166 (187)
453 cd05120 APH_ChoK_like Aminogly 99.6 3.8E-14 8.2E-19 133.9 12.7 135 503-653 2-138 (155)
454 KOG0532 Leucine-rich repeat (L 99.5 1.6E-15 3.5E-20 160.3 1.2 194 144-371 74-271 (722)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.1E-13 2.3E-18 140.7 14.0 138 504-653 36-191 (239)
456 PLN03150 hypothetical protein; 99.5 3.1E-14 6.8E-19 164.5 11.1 108 99-206 420-528 (623)
457 KOG1266 Protein kinase [Signal 99.5 2E-14 4.4E-19 142.6 6.4 208 550-774 119-337 (458)
458 KOG0590 Checkpoint kinase and 99.5 1.6E-15 3.5E-20 172.3 -1.8 253 499-768 20-286 (601)
459 COG4886 Leucine-rich repeat (L 99.5 1.4E-13 2.9E-18 152.4 9.1 201 101-310 97-298 (394)
460 KOG0532 Leucine-rich repeat (L 99.4 3.3E-15 7.2E-20 158.0 -3.8 197 118-324 72-271 (722)
461 COG4886 Leucine-rich repeat (L 99.4 1.2E-13 2.7E-18 152.7 7.5 202 124-334 96-298 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.4 2.9E-12 6.2E-17 141.7 13.0 145 504-656 122-309 (437)
463 KOG1243 Protein kinase [Genera 99.4 1.3E-11 2.9E-16 134.8 17.1 169 519-702 33-201 (690)
464 PLN03150 hypothetical protein; 99.3 8E-13 1.7E-17 152.9 6.6 93 290-382 419-512 (623)
465 KOG3207 Beta-tubulin folding c 99.3 2.7E-13 5.8E-18 139.8 -1.7 227 101-328 97-341 (505)
466 KOG3207 Beta-tubulin folding c 99.3 1.1E-12 2.5E-17 135.1 1.8 210 142-352 118-341 (505)
467 KOG0601 Cyclin-dependent kinas 99.3 5.4E-12 1.2E-16 136.9 7.1 249 500-768 115-379 (524)
468 KOG0531 Protein phosphatase 1, 99.3 1E-12 2.2E-17 145.6 1.4 246 96-377 71-322 (414)
469 PRK04750 ubiB putative ubiquin 99.3 6E-12 1.3E-16 140.4 7.4 149 497-656 118-316 (537)
470 KOG0531 Protein phosphatase 1, 99.3 7.4E-13 1.6E-17 146.6 -0.5 246 118-398 69-322 (414)
471 PF14580 LRR_9: Leucine-rich r 99.2 8.3E-12 1.8E-16 118.4 4.0 80 98-182 20-101 (175)
472 KOG1259 Nischarin, modulator o 99.2 2E-12 4.3E-17 126.7 -0.4 129 121-255 284-413 (490)
473 PF14580 LRR_9: Leucine-rich r 99.2 2.1E-11 4.5E-16 115.7 6.2 128 116-248 14-147 (175)
474 cd05151 ChoK Choline Kinase (C 99.2 6.1E-11 1.3E-15 114.5 9.7 131 504-653 3-136 (170)
475 KOG1909 Ran GTPase-activating 99.2 1.8E-12 3.9E-17 130.4 -2.9 185 94-278 27-254 (382)
476 KOG1909 Ran GTPase-activating 99.1 1.1E-12 2.4E-17 131.9 -5.6 98 116-230 25-133 (382)
477 cd05146 RIO3_euk RIO kinase fa 99.1 6.7E-10 1.4E-14 107.7 13.6 139 505-655 3-175 (197)
478 KOG1259 Nischarin, modulator o 99.1 1.3E-11 2.8E-16 121.1 1.3 132 192-353 283-415 (490)
479 KOG0601 Cyclin-dependent kinas 99.1 5E-11 1.1E-15 129.5 3.9 250 496-771 262-517 (524)
480 KOG0606 Microtubule-associated 99.1 3E-11 6.6E-16 137.4 1.5 252 496-763 801-1084(1205)
481 COG3642 Mn2+-dependent serine/ 99.1 1.6E-09 3.4E-14 100.9 11.8 133 506-653 3-140 (204)
482 KOG4658 Apoptotic ATPase [Sign 99.0 1.5E-10 3.3E-15 136.6 5.4 273 96-375 522-809 (889)
483 cd05154 ACAD10_11_like Acyl-Co 99.0 1.9E-09 4E-14 109.1 11.9 143 505-653 4-206 (223)
484 KOG3087 Serine/threonine prote 99.0 5.9E-09 1.3E-13 96.4 13.2 146 503-653 11-165 (229)
485 KOG4658 Apoptotic ATPase [Sign 98.9 4.2E-10 9.2E-15 132.9 4.1 251 97-352 545-809 (889)
486 PF13855 LRR_8: Leucine rich r 98.9 9.8E-10 2.1E-14 85.7 3.5 61 97-157 1-61 (61)
487 PF13855 LRR_8: Leucine rich r 98.9 1.3E-09 2.9E-14 85.0 2.8 57 147-203 3-59 (61)
488 PF01163 RIO1: RIO1 family; I 98.8 4E-08 8.7E-13 95.0 12.4 129 514-655 1-157 (188)
489 PRK15123 lipopolysaccharide co 98.8 1.5E-07 3.3E-12 96.7 14.8 144 505-653 28-194 (268)
490 KOG2982 Uncharacterized conser 98.7 7E-10 1.5E-14 109.2 -2.4 84 120-203 70-156 (418)
491 KOG3741 Poly(A) ribonuclease s 98.7 3.1E-07 6.8E-12 97.8 16.3 169 512-703 289-475 (655)
492 COG4248 Uncharacterized protei 98.7 5.3E-07 1.2E-11 93.6 15.9 258 502-771 14-299 (637)
493 COG0478 RIO-like serine/threon 98.6 3.3E-07 7.2E-12 90.8 11.8 138 501-653 93-251 (304)
494 KOG1859 Leucine-rich repeat pr 98.6 6.9E-10 1.5E-14 121.2 -7.8 125 243-373 166-292 (1096)
495 KOG2137 Protein kinase [Signal 98.6 1.4E-08 3.1E-13 112.0 1.4 152 607-769 105-266 (700)
496 KOG1859 Leucine-rich repeat pr 98.6 1.3E-09 2.7E-14 119.2 -7.1 127 170-302 165-292 (1096)
497 KOG2982 Uncharacterized conser 98.5 2E-08 4.2E-13 99.2 0.3 62 144-205 70-133 (418)
498 PRK09902 hypothetical protein; 98.4 3.3E-06 7.2E-11 82.1 13.3 140 508-653 27-179 (216)
499 KOG4579 Leucine-rich repeat (L 98.4 1.9E-08 4.1E-13 88.1 -2.1 84 193-278 53-136 (177)
500 KOG4579 Leucine-rich repeat (L 98.4 2.4E-08 5.3E-13 87.4 -2.3 105 122-230 28-136 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-86 Score=812.65 Aligned_cols=720 Identities=32% Similarity=0.493 Sum_probs=425.4
Q ss_pred CCCchHHHhhcHHHHHHhhcCCccccCCCCCCCCCccCCceeeCCCCCeEEEeCCCCCccccccc---------------
Q 003780 26 ATTDDICVAAFELEREALVNSSWWSNLIDSNSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQ--------------- 90 (796)
Q Consensus 26 ~~~~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~--------------- 90 (796)
...|..++.+++... .+...+...| ..+.+||.|.||+|+..++|+.|+|+++++.|.++.
T Consensus 27 ~~~~~~~l~~~~~~~---~~~~~~~~~w-~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 27 HAEELELLLSFKSSI---NDPLKYLSNW-NSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CHHHHHHHHHHHHhC---CCCcccCCCC-CCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 345666777765543 2111111111 235689999999999878899998888776554432
Q ss_pred ---------cccCCC----------------------CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCC
Q 003780 91 ---------FNFSCF----------------------PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPP 139 (796)
Q Consensus 91 ---------~~~~~l----------------------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 139 (796)
..+..+ ++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|.
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCCh
Confidence 112122 3333333333444445566677777888888888887777777
Q ss_pred CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCc
Q 003780 140 ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNL 219 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 219 (796)
.|+++++|++|+|++|++.+.+|..++++++|+.|+|++|++++.+|..|+++++|++|+|++|++++.+|..++++++|
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 262 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCC
Confidence 77777777777777777776666666666666666666666666556555555555555555555555555444444444
Q ss_pred cccccCCccccccCCCccccc------------------------CccceEEecccccc---------------------
Q 003780 220 VALNVGGNKLMGPIPSTLFRL------------------------TNLTYLYLHSNHLN--------------------- 254 (796)
Q Consensus 220 ~~L~l~~N~l~~~~~~~l~~l------------------------~~L~~L~L~~N~l~--------------------- 254 (796)
++|++++|++++.+|..+.++ ++|+.|++++|.++
T Consensus 263 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 342 (968)
T PLN00113 263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342 (968)
T ss_pred CEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCC
Confidence 444444444443333333333 33333333333333
Q ss_pred ---ccCCccccCCcccceeecccccccccCccc------------------------cccccccccccccCccc------
Q 003780 255 ---GSIPPEIGNMTGILKVDMSMNNIEGTIPLE------------------------LTRLSQLLYLSISSNML------ 301 (796)
Q Consensus 255 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------------------------l~~l~~L~~L~l~~N~l------ 301 (796)
+.+|..++.+++|+.|+|++|++++.+|.. +..+++|+.|++++|.+
T Consensus 343 ~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~ 422 (968)
T PLN00113 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS 422 (968)
T ss_pred CCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECCh
Confidence 333333333333334444333333222211 11112222222222222
Q ss_pred -----------------------------------------------------------------cCccccccccccccc
Q 003780 302 -----------------------------------------------------------------SGQIPITIAGLISLK 316 (796)
Q Consensus 302 -----------------------------------------------------------------~~~~~~~~~~l~~L~ 316 (796)
++.+|..+.++++|+
T Consensus 423 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~ 502 (968)
T PLN00113 423 EFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELM 502 (968)
T ss_pred hHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccC
Confidence 222222233333444
Q ss_pred eecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc-ccccceEEecccccCCCCCccccc---cccccccCCC
Q 003780 317 GLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKLNGTIPPFLYH---RFPLDLSYND 392 (796)
Q Consensus 317 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~l~~N~l~~~~p~~~~~---~~~l~l~~N~ 392 (796)
.|+|++|++.+.+|..+..+++|+.|+|++|.+++.+|..+. +++|+.|+|++|+++|.+|..+.+ +..+++++|.
T Consensus 503 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 503 QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 444444444445555555555566666666666666655553 566777777777777767655433 4467777777
Q ss_pred CcccCCCCCCCC---CccccCCccccccCCCCCCCC-CCCCccchhHHHHHHHHhhHHHHHHHHHHhhheeeeecchhhh
Q 003780 393 LEGEIPDYFRDS---PFKVYGNQGICYFSACSTLHT-PTASKSKSLVLRVLNIILPITACVIFLTLAFIVFLLNKNEIAK 468 (796)
Q Consensus 393 l~~~~p~~~~~~---~~~~~~n~~~c~~~~~~~~~~-~~~~~~~~~~~~vl~ii~~v~~~~~~l~l~~~~~~~~~~~~~~ 468 (796)
+.|.+|..-... ...+.||+++|+......... ....+....+. ++++ ++++++++++++++++++++++..+
T Consensus 583 l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (968)
T PLN00113 583 LHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWF-YITC--TLGAFLVLALVAFGFVFIRGRNNLE 659 (968)
T ss_pred ceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeee-ehhH--HHHHHHHHHHHHHHHHHHHhhhccc
Confidence 777777532211 123468899997542111000 00111111111 1111 1111122222222222222222111
Q ss_pred ccCCCCCCCCc-eeeec--cCCcccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHH
Q 003780 469 LMTGPTKSGDV-FSIWN--YDGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNS 544 (796)
Q Consensus 469 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~ 544 (796)
........+.. ..... ....++++++ ...|...+.||+|+||.||+|+. .+++.||||++......
T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------- 729 (968)
T PLN00113 660 LKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------- 729 (968)
T ss_pred ccccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------
Confidence 11111111110 00000 0112344443 35677888999999999999976 57999999998654322
Q ss_pred HHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 003780 545 FQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS 624 (796)
Q Consensus 545 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 624 (796)
...|++.+++++|||||+++++|.+++..++||||+++|+|.++++. ++|..+.+++.|+|+||+|||+.+.++
T Consensus 730 ~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 730 PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 23468889999999999999999999999999999999999999963 789999999999999999999776779
Q ss_pred eEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 003780 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPG 704 (796)
Q Consensus 625 ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~ 704 (796)
|+||||||+||+++.++.+++. ||.+..... .....+++.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~ 878 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPA 878 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccccc----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCC
Confidence 9999999999999999988875 665543321 12235889999999999999999999999999999999999998
Q ss_pred cccccCCCCCchh------hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 705 ELLSSLSSPSSDQ------KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 705 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
+............ .......+++.+.... .....+..++.+++.+|++.||++||+|+||++.|++...
T Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 879 DAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CcccCCCCcHHHHHHHhcCccchhheeCccccCCC-CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 6322111000000 0011122233332221 1233455678899999999999999999999999987754
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-50 Score=427.31 Aligned_cols=283 Identities=39% Similarity=0.632 Sum_probs=236.6
Q ss_pred CCcccHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEe
Q 003780 486 DGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565 (796)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 565 (796)
...++++++..+|++|...+.||+|+||.||+|...+|+.||||++....... .++|.+|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 45689999999999999999999999999999999999999999887665432 346999999999999999999999
Q ss_pred EEEecc-eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 566 FCLHKK-CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 566 ~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
||.+.+ ..+||||||++|+|.++++..... .++|..|++|+.++|+||+|||+.+.|+||||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999998 599999999999999999976543 689999999999999999999999999999999999999999999999
Q ss_pred EeeeccccccCCCCCCcccc-ccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCC-------ch
Q 003780 645 VADFGTARLLDSDSSNRTIV-AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPS-------SD 716 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~-------~~ 716 (796)
|+|||+|+............ .||.+|+|||+...+..++|+|||||||+++|++||+.|.+......... ..
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999997654311222222 79999999999999999999999999999999999999877432111110 11
Q ss_pred hhhHHHHhhcCCCCC-ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 717 QKIMLIDVLDSRLSP-PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
....+.+++|+++.. .... ..++..+..++.+|++.+|++||+|.||++.|+....
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~--~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPD--EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCCh--HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 111456677777652 2221 1566679999999999999999999999999966543
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-46 Score=397.77 Aligned_cols=253 Identities=26% Similarity=0.414 Sum_probs=220.6
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+|...+.||+|||+.+|+++. ..|+.||+|++.+.........+.+.+|+++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4689999999999999999976 789999999999877666666778999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|+|++++|.+++++.+ .+++.++..+..||+.||.|||+. +|+|||||..|+|++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999998554 499999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.....+.+|||.|+|||++....++..+||||+|||+|-|+.|++||+.. .-+..+..+.......+.
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--------~vkety~~Ik~~~Y~~P~---- 239 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--------TVKETYNKIKLNEYSMPS---- 239 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------hHHHHHHHHHhcCccccc----
Confidence 77777889999999999999999999999999999999999999999831 223333333333222111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.-..+..++|.++|++||.+|||+++|+.+=.
T Consensus 240 -~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~F 271 (592)
T KOG0575|consen 240 -HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPF 271 (592)
T ss_pred -ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHh
Confidence 11223568999999999999999999998843
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=391.91 Aligned_cols=258 Identities=32% Similarity=0.530 Sum_probs=215.7
Q ss_pred CccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-eeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-CMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lV~e~ 579 (796)
....+.+|+|+||+||+|.++....||||++......... .++|.+|+.++.+++|||||+++|+|.++. ..++||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3445569999999999999975444999999887766554 679999999999999999999999999988 79999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCCCCeEecCCC-cEEEeeeccccccCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS-IVHRDISSNNILLNSKL-EAFVADFGTARLLDSD 657 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 657 (796)
|++|+|.+++++. ....+++..+++++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999875 345699999999999999999999999 7 99999999999999998 9999999999876543
Q ss_pred CCCccccccccCccCccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNRTIVAGTYGYIAPELAY--TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ......+.....++....
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--------~~~~~~v~~~~~Rp~~p~ 269 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--------VQVASAVVVGGLRPPIPK 269 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcCCCCCCCc
Confidence 33444467999999999999 56899999999999999999999999985332 223333443444444332
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
. ....+..++.+||+.||++||++.|++..|+.+..
T Consensus 270 ~---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 270 E---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred c---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 1 33347788999999999999999999999986543
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=376.89 Aligned_cols=257 Identities=27% Similarity=0.380 Sum_probs=211.5
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-eeeEEEe
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-CMFLIYK 578 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lV~e 578 (796)
.+..+.||+|..|+||+++++ +++.+|.|.++.... ....+++.+|++++++.+||+||+++|.|..++ ...++||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~--~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNID--PALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCC--HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 445678999999999999765 799999999954443 344689999999999999999999999999999 5999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++|+|++++...+ .+++....+|+.+|++||.|||+ + +||||||||+|||++..|++||||||.++.+...
T Consensus 159 YMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999998653 48999999999999999999996 5 9999999999999999999999999999887644
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......||..|||||.+.+..|+.++||||||+.++|+.+|+.|+.... .........+..+.+...+ .....
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~---~~~~~~~~Ll~~Iv~~ppP-~lP~~- 305 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN---PPYLDIFELLCAIVDEPPP-RLPEG- 305 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC---CCCCCHHHHHHHHhcCCCC-CCCcc-
Confidence 3445679999999999999999999999999999999999999987421 1111222233334443222 22111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
....+++.++..||++||.+||+++|+++|-.-.+
T Consensus 306 -~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 306 -EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred -cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 23456899999999999999999999999965443
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-47 Score=380.64 Aligned_cols=259 Identities=25% Similarity=0.322 Sum_probs=210.6
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhH----HHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETT----FFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
..+.|.+.+.+|+|+||.|-+|. .++|+.||||+++........ ....+.+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 34568888999999999999994 668999999999876654422 2234679999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC---CcEEEeee
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK---LEAFVADF 648 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Df 648 (796)
..|+||||++||.|.+.+-.... +.+..-..+++|++.|+.|||++ ||+||||||+|||++.+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999999876543 67777788999999999999999 99999999999999876 78999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCc---CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVV---TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
|+|+..+ ......+.||||.|.|||++.+..+ ..++|+||+||++|-+++|.+||... .......+.+
T Consensus 324 GlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~--------~~~~sl~eQI 394 (475)
T KOG0615|consen 324 GLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEE--------YTDPSLKEQI 394 (475)
T ss_pred chhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccc--------cCCccHHHHH
Confidence 9999876 4455677899999999999986543 34789999999999999999999732 1122122333
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.+...........+-..+..++|.+||..||++|||++|+++|-+
T Consensus 395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 333222222223344456889999999999999999999999854
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=363.22 Aligned_cols=201 Identities=28% Similarity=0.512 Sum_probs=181.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||.|+||+||+|+++ ++..||||.+....... +..+.+..|+++++.++|||||++++++..++..++|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~-k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNK-KLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCH-HHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 467888899999999999999765 68999999998876432 3356788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC------CcEEEeeecc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK------LEAFVADFGT 650 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~------~~~kl~Dfg~ 650 (796)
||||.||+|.+++++.+ .+++..+..++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999999765 489999999999999999999999 99999999999999875 4579999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
|+.+.+. ......+|++.|||||++...+|+.|+|+||+|+++|+|++|+.||+.
T Consensus 162 AR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9988743 344567899999999999999999999999999999999999999983
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=361.65 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=211.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.++||+|+||.||.++.+ +++.||+|++++....+....+...+|..++.+++||.||+++-.|++++..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 468999999999999999999654 6899999999998877766677899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+.||.|..++++... +++..+.-++..|+.||.|||+. +||||||||+|||+|.+|+++|+|||+++..-.
T Consensus 104 ld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999987643 88888888999999999999999 999999999999999999999999999996555
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
........+||+.|||||++.+..|+.++|+||+|+++|||++|..||... ....+...+...+..... ..
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--------~~~~~~~~I~~~k~~~~p-~~ 248 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--------DVKKMYDKILKGKLPLPP-GY 248 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--------cHHHHHHHHhcCcCCCCC-cc
Confidence 555566689999999999999999999999999999999999999999832 223444444444422211 11
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCC
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPT 761 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs 761 (796)
.. .+..+++.+.++.||++|-.
T Consensus 249 ls---~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 249 LS---EEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CC---HHHHHHHHHHhccCHHHhcC
Confidence 11 23668999999999999963
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-45 Score=349.45 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=211.6
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEe-EEEecc-eeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG-FCLHKK-CMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~-~~~~~~-~~~l 575 (796)
.+|++.+.||.|.||+||+++ ..+|..+|.|.++-... +....+....|+.++++++|||||++++ .+.++. ..++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 458888999999999999995 67899999999984443 4445678999999999999999999998 444444 4899
Q ss_pred EEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 576 IYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPS-IVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
|||++..|+|...++..+ ++..+++..+++++.|+++||.++|+..+.+ |+||||||.||+++.+|.+|++|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999987543 4466999999999999999999999943322 78999999999999999999999999999
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC-CCCc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR-LSPP 732 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 732 (796)
+..........+|||.||+||.+.+..|+.||||||+||++|||+.-+.||+..+ -..+...+... .++-
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n---------~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN---------LLSLCKKIEQGDYPPL 248 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc---------HHHHHHHHHcCCCCCC
Confidence 9877666667889999999999999999999999999999999999999998431 12222222222 2211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
... -....+.++|..|+.+||+.||+...+++.+..
T Consensus 249 p~~---~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 PDE---HYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cHH---HhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 112 223458889999999999999997666666654
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.2e-43 Score=341.89 Aligned_cols=263 Identities=24% Similarity=0.342 Sum_probs=206.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|+....+|+|+||+||+++.+ +|+.||||++.....+ ....+-..+|++++++++|||+|.++++|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd-~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD-PVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCcc-HHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 46778889999999999999876 5999999999876543 333456789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++..-|.+ +.+... .++...+.++++|+++|+.|+|++ ++|||||||+||+++.++.+|+||||+|+.+..+
T Consensus 81 E~~dhTvL~e-Le~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDHTVLHE-LERYPN--GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecchHHHHH-HHhccC--CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 9999855544 443322 378899999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC----------CCchhhhHH-HHhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS----------PSSDQKIML-IDVL 725 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~----------~~~~~~~~~-~~~~ 725 (796)
....+.++.|.+|+|||.+.+ .+|...+||||+||++.||++|.+-|...++++. -....+..+ ....
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 777778889999999999887 7899999999999999999999988764433210 000000000 0000
Q ss_pred cC--CCCCc-----cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 DS--RLSPP-----VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 ~~--~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
-. +++.. .++........+.++++.|++.||.+|++-+|++.|
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 00 01111 111111112247899999999999999999999876
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-43 Score=366.74 Aligned_cols=255 Identities=27% Similarity=0.472 Sum_probs=211.2
Q ss_pred CCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
.+...+.||+|.||.||.|.+.....||+|.++..... .+.|.+|+++|++++|++||+++++|..++..+|||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 45567889999999999999987789999999876544 24788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
|+.|+|.++++.. ....+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...++.+
T Consensus 283 m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred cccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 9999999999873 345688999999999999999999999 999999999999999999999999999996554433
Q ss_pred Ccc-ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 660 NRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 660 ~~~-~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
... ...-+..|.|||.+..+.++.|||||||||+||||+| |+.|+..+. ...+.+.+.+..+-+.+..
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms---------n~ev~~~le~GyRlp~P~~- 428 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS---------NEEVLELLERGYRLPRPEG- 428 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC---------HHHHHHHHhccCcCCCCCC-
Confidence 222 1223567999999999999999999999999999998 777765322 2234444555444333222
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.+..+.+++..||+.+|++|||++.+...++....
T Consensus 429 --CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 429 --CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred --CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 33447889999999999999999999888876643
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-42 Score=355.43 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=213.7
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
...+|.+.+.||+|+|++|++|+ .+.+++||||++.+.-...+.-.+-+..|-.+|.+| .||.|++++..|+++...|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 45689999999999999999996 457999999999876655544456788899999999 7999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
.|+||+++|+|.+++++.+. +++.....++.+|+.||+|||++ |||||||||+|||+|+||++||+|||.|+.+
T Consensus 151 FvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 99999999999999997643 89999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCC-------------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 655 DSDSSN-------------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 655 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
.+.... ....+||..|++||++.....++.+|+|+|||++|+|+.|++||...+. ...+
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--------yliF 296 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--------YLIF 296 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--------HHHH
Confidence 542111 1346799999999999999999999999999999999999999985332 2333
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..+++-....+. .....+.+|+.+.|..||.+|+|..||-+|..-.
T Consensus 297 qkI~~l~y~fp~-----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 297 QKIQALDYEFPE-----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred HHHHHhcccCCC-----CCCHHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 334333322111 1113467899999999999999997766664433
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=343.43 Aligned_cols=258 Identities=26% Similarity=0.409 Sum_probs=213.0
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||.|..++||+|+ .+.++.||||++.-++.... .+.+.+|+..|+.++||||++++..|..+...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4689999999999999999996 56789999999998877654 67899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|.||.+|++.++++...... +++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999998765543 89999999999999999999999 999999999999999999999999998776544
Q ss_pred CCCCc----cccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 657 DSSNR----TIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 657 ~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
..... ....||+.|||||++.. ..|+.|+||||||++..||.+|+.||..+.+. .++...+....+
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--------kvLl~tLqn~pp 250 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--------KVLLLTLQNDPP 250 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--------HHHHHHhcCCCC
Confidence 33222 33579999999999543 35889999999999999999999999854431 222222222221
Q ss_pred -----CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 731 -----PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 731 -----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....+........+.+++..||+.||.+|||+++++++=
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 111111222233688999999999999999999999873
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=357.68 Aligned_cols=252 Identities=24% Similarity=0.363 Sum_probs=213.5
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
..|.....||+|+.|.||.|. ..+++.||||++........ +-+.+|+.+|+..+|+|||++++.|...+..++||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k---eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK---ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch---hhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 457777889999999999995 56799999999987776543 46889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||++|+|.+.+.... +++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+...
T Consensus 350 Eym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred eecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999999999987543 89999999999999999999999 9999999999999999999999999999988877
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........|||.|||||+.....|.+|+||||||+++.||+.|.+||-....+ .....+...-.+.... .
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl---------rAlyLIa~ng~P~lk~-~ 492 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---------RALYLIATNGTPKLKN-P 492 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH---------HHHHHHhhcCCCCcCC-c
Confidence 66666778999999999999999999999999999999999999998643221 1111222222222221 2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
......+.+++.+||+.||++||++.|+|+|-.
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpF 525 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEHPF 525 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcChh
Confidence 223345889999999999999999999999843
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.3e-41 Score=319.38 Aligned_cols=258 Identities=26% Similarity=0.360 Sum_probs=207.9
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|...+.+|+|.||.||+|+ .++|+.||||+++.....+. ......+|++.++.++||||+.+++.|.+.+...+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 467888999999999999995 56899999999988765533 2356789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||+. +|+..++... ..++...+..++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99987 8999988643 4588999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh-----------
Q 003780 658 SSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL----------- 725 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 725 (796)
....+..+-|.+|+|||.+.|. .|+..+||||.||++.||+-|.+-|...+++ ++-..+...+
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-----dQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-----DQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-----HHHHHHHHHcCCCCcccCccc
Confidence 6666656789999999988764 6999999999999999999988766543321 1111111111
Q ss_pred -------cC--CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 -------DS--RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 -------~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.- ...+..............+++.+|+..||.+|+++.|++++
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00 01111111122223346899999999999999999999988
No 16
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2e-41 Score=352.43 Aligned_cols=250 Identities=27% Similarity=0.403 Sum_probs=215.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+....+++ .+.+.+|++++++++|||||.++++|+...+.++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~-l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKE-LKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHH-HHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 56888899999999999999766 6899999999887766544 678999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+.| +|..++..... ++++.+..++.++..||.|||+. +|.|||+||+||+++..+.+|+||||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99988 99999987654 99999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
....+...|||-|||||+..+..|+..+|.||+||++|||++|++||.... -...+..+......++
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~~d~v~~p----- 220 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSILKDPVKPP----- 220 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHhcCCCCCc-----
Confidence 776777889999999999999999999999999999999999999997321 1111222222222221
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+..++...+.+||.+|.+-.+++.|-
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 13344588999999999999999999999884
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-41 Score=343.12 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=205.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc--eeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK--CMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~l 575 (796)
.+|...+.||+|+||+||++... +|+..|||.+....... .+.+.+|+.++++++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~---~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT---SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh---HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 35677889999999999999765 49999999987763322 567899999999999999999999855544 6899
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeecccccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARLL 654 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~ 654 (796)
.|||+++|+|.+++.+... .+++..+..+..||++||+|||++ +||||||||+|||++. ++.+||+|||+++..
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999998754 499999999999999999999999 9999999999999999 799999999999876
Q ss_pred CCC---CCCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSD---SSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
... ........||+.|||||++..+. ...++||||+||++.||+||+.||... ......+..+......
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~ 241 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSL 241 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCC
Confidence 631 12233467999999999998543 335999999999999999999998742 1111122222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
|..... -.....+++.+|++.||++||||+++++|......
T Consensus 242 P~ip~~---ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 242 PEIPDS---LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred CCCCcc---cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 222222 22346789999999999999999999999876543
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=322.31 Aligned_cols=239 Identities=25% Similarity=0.364 Sum_probs=208.2
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||.|+||.|..++.+ +|..+|+|++.....-..+..+...+|..+++.+.||.++++++.+.+....++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 57888999999999999999765 68999999999888777666778899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||.+||-|.+++++.+. +++..+..++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999997654 89999999999999999999999 9999999999999999999999999999987643
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.-+.||||.|+|||.+....|..++|.|||||++|||+.|..||..... ...+..++......+.
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~---- 262 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPS---- 262 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCc----
Confidence 4457899999999999999999999999999999999999999984322 3445555555543221
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC
Q 003780 738 MQDIVLVTTVALACLHSKPKFR 759 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~R 759 (796)
-....+.+++...++.|-.+|
T Consensus 263 -~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 263 -YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -ccCHHHHHHHHHHHhhhhHhh
Confidence 111236689999999999999
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-41 Score=346.40 Aligned_cols=263 Identities=28% Similarity=0.372 Sum_probs=205.6
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 575 (796)
+.|+.++.||+|+||.||+|+ ..+|+.||+|++..+...+. ......+|+.+|++++||||+++.+...+. +..|+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 457777889999999999996 56899999999988765443 356788999999999999999999999877 78999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+|||+. +|.-++... ...+++.++..++.|+++||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++.
T Consensus 196 VFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999998 787777653 34589999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCC-ccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchhhh--HH
Q 003780 656 SDSSN-RTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQKI--ML 721 (796)
Q Consensus 656 ~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~~~--~~ 721 (796)
..... .+..+-|.+|+|||++.|. .|+.++|+||.|||+.||++|++.|.....+ ..+...... .+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 65443 5667789999999998865 6999999999999999999999998754331 001000000 00
Q ss_pred HHhhcCCCCCccchh----hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 722 IDVLDSRLSPPVDRM----VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....-.....+.+. .........+|+..+|..||.+|.|+.+++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000000000111110 11112346789999999999999999999876
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=352.55 Aligned_cols=256 Identities=22% Similarity=0.363 Sum_probs=210.1
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhh--HHHHHHHHHHHHHhhcC-CCceeeEEeEEEecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEET--TFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 572 (796)
..+.|.+.+.||+|+||+|+.|. ..+|+.||+|.+........ ...+.+.+|+.++++++ ||||+++++++..+..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45689999999999999999995 45789999997766522211 23456778999999999 9999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeeccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFGTA 651 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a 651 (796)
.++||||+.+|+|.+++.+.. .+.+.++.++++|++.|++|+|++ +|+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999998743 378899999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCCccccccccCccCccccccCC-cC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTMV-VT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
.............+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.. .......+.....
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcCCc
Confidence 98743344556688999999999999877 76 68999999999999999999998521 1222222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..+.. .. ..++..++.+|+..||.+|+++.|++.+-+
T Consensus 241 ~~p~~--~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 241 KIPSY--LL--SPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred cCCCC--cC--CHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 21111 10 334778999999999999999999997743
No 21
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-41 Score=368.65 Aligned_cols=260 Identities=26% Similarity=0.416 Sum_probs=214.7
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
..+....+.||+|+||.||+|+.. +...||||.++...... ..++|++|++++..++|||||+++|.|.+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~--~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ--ARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH--HHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 345566778999999999999643 45679999998877553 3579999999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc-----------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE-----------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
..++|+|||..|+|.++|....+ +..++..+.+.|+.|||.|++||-++ .+|||||..+|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999975431 23488899999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCcc--ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchh
Q 003780 641 LEAFVADFGTARLLDSDSSNRT--IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~ 717 (796)
..|||+|||+++.+-..++... ...-..+|||||.+..++++++||||||||+|||+++ |+.|++. ..+
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g--------lSn 711 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG--------LSN 711 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc--------cch
Confidence 9999999999997544333221 2234678999999999999999999999999999997 8899873 344
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
++.+..+-...+-+- +...+.++..|+..||+..|++||+++||-..|+....
T Consensus 712 ~EVIe~i~~g~lL~~----Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 712 QEVIECIRAGQLLSC----PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHHHHcCCcccC----CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 455555544444222 22344568899999999999999999999999977544
No 22
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=354.85 Aligned_cols=269 Identities=25% Similarity=0.411 Sum_probs=216.4
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL 568 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 568 (796)
.+.+++....+++.+.+.||+|.||+||+|++. ..||||+++....... ..+.|++|+.++++-+|.||+-+.|||.
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 344556666677888899999999999999985 3699999998877665 4789999999999999999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
.+.. .||+.+|+|.+|+.++|... ..++....+.|++|||+|+.|||.+ +|||||||..||++.++++|||+||
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred CCce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecc
Confidence 8888 99999999999999999754 3588899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCC--CCCCccccccccCccCcccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 649 GTARLLDS--DSSNRTIVAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 649 g~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|++..... .........|...|||||++.. .+|++.+||||||+|+|||+||..||.. .. .+..+..
T Consensus 533 GLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~-------~dqIifm 604 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QN-------RDQIIFM 604 (678)
T ss_pred cceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CC-------hhheEEE
Confidence 99975322 2222333457889999999874 4689999999999999999999999872 11 1111111
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
+-...+.+...........++.+|+..||..++++||.+.+|+..|+.+..
T Consensus 605 VGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 605 VGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 111212222222223334458899999999999999999999998877655
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=347.95 Aligned_cols=264 Identities=23% Similarity=0.337 Sum_probs=210.4
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecc-ee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKK-CM 573 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~-~~ 573 (796)
..++|.+.+.||.|+||.||+|+ ...|+.||||+++......++. .=.+|++.+++++ |||||++.+.+.+.+ ..
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 45689999999999999999996 4579999999998766553321 2368999999998 999999999999988 99
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|||||+. +|+++++.+ ...+++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 999999976 999999876 45699999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCC---chhhh
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPS---SDQKI 719 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~---~~~~~ 719 (796)
+... ...+.++.|.+|+|||++. .+.|+.+.|||++|||++|+.+-++-|...+..+ .+. .....
T Consensus 160 v~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 160 VRSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred cccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 7643 3345567899999999765 6789999999999999999999888876543321 000 00001
Q ss_pred HHHHhhcCCCCC----ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 720 MLIDVLDSRLSP----PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 720 ~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.+...+.-+++. ...........+..+++.+|+..||.+|||++|++++-
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 122222222221 11222223445688999999999999999999999985
No 24
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-40 Score=350.02 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=212.2
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+-|++.+.||.|+.|.|-.|++ .+|+.+|||++.+...-.......+.+|+.+|+-+.||||+++++.++.+.++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4577889999999999999964 579999999998874443344567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|-|++++-+.+. +++.++.+++.||..|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..-. +
T Consensus 92 Eyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 99999999999986654 89999999999999999999999 99999999999999999999999999998644 3
Q ss_pred CCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
+.-..+.||+|.|.|||++.|.+|. .++||||+|||||.|+||+.||++.+ -..+...+.... + .+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---------ir~LLlKV~~G~---f-~M 231 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---------IRVLLLKVQRGV---F-EM 231 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---------HHHHHHHHHcCc---c-cC
Confidence 4445667899999999999999887 58999999999999999999998422 112222222221 1 11
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
+..-..+.++|+.+|+..||++|.|++||++|..-
T Consensus 232 Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 232 PSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred CCcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 22333457899999999999999999999999653
No 25
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-40 Score=330.01 Aligned_cols=253 Identities=21% Similarity=0.386 Sum_probs=217.8
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|++.+.||+|.||.|-+|. .+.|+.||||.+++++..++...-.+.+|+++|+.++||||+.++++|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3478888999999999999995 578999999999999988877667889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||..+|.|++|+.+.+. +++.+...++.||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++-.+..
T Consensus 132 MEYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 999999999999997654 99999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. ....+++|+|.|.+||...+.+|. +.+|-||+||+||.|+.|..||+.. .....+.++-......+..
T Consensus 206 ~-kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--------Dhk~lvrQIs~GaYrEP~~- 275 (668)
T KOG0611|consen 206 K-KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--------DHKRLVRQISRGAYREPET- 275 (668)
T ss_pred c-cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--------hHHHHHHHhhcccccCCCC-
Confidence 3 445668999999999999998887 6899999999999999999999843 2233333333332222221
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
+.....+|.+||..+|++|-|+.+|..|..-
T Consensus 276 -----PSdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 276 -----PSDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred -----CchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 1124578999999999999999999999754
No 26
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3e-39 Score=350.03 Aligned_cols=261 Identities=26% Similarity=0.387 Sum_probs=203.2
Q ss_pred HhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 569 (796)
..++|++.+.||+|+||.||+|.. .+++.||+|++....... ..+.+.+|+.++.++ +||||+++++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATAS--EHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchH--HHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 356899999999999999999963 235789999987543322 245789999999999 89999999999876
Q ss_pred cc-eeeEEEeeccCCcHHHHHhhcCc------------------------------------------------------
Q 003780 570 KK-CMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------ 594 (796)
Q Consensus 570 ~~-~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------ 594 (796)
++ ..++||||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54 58899999999999999875321
Q ss_pred -----ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC--Cccccccc
Q 003780 595 -----AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS--NRTIVAGT 667 (796)
Q Consensus 595 -----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt 667 (796)
...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ......++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 12477888899999999999999999 999999999999999999999999999986543221 12223466
Q ss_pred cCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHH
Q 003780 668 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTT 746 (796)
Q Consensus 668 ~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 746 (796)
+.|+|||++.+..++.++|||||||++|||++ |..||..... .. .....+......... ......+.+
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-------~~-~~~~~~~~~~~~~~~---~~~~~~l~~ 308 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-------NE-EFCQRLKDGTRMRAP---ENATPEIYR 308 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-------cH-HHHHHHhcCCCCCCC---CCCCHHHHH
Confidence 78999999998899999999999999999997 9999874221 11 111111111111111 112234789
Q ss_pred HHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 747 VALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 747 li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
++.+||+.||++|||+.|+++.|++..
T Consensus 309 li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 309 IMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999999998653
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=337.24 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=204.3
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----cceeeEEEee
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----KKCMFLIYKY 579 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lV~e~ 579 (796)
...||+|++|.||+|.. +|+.||||++...........+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 689999999987665554556788999999999999999999999976 3468899999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++|+|.+++.+.. .+++....+++.+++.||.|||+.. +++||||||+||+++.++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 99999999998653 4889999999999999999999732 78899999999999999999999999998654322
Q ss_pred CccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 660 NRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..................
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~~~~~--- 244 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT--------TKEIYDLIINKNNSLKLP--- 244 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcCCCCCCC---
Confidence 22457889999999876 678999999999999999999999997421 112222222222222221
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
......+.+++.+||+.||++|||++|+++.|+..+.
T Consensus 245 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 245 LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1223458899999999999999999999999988654
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=346.09 Aligned_cols=246 Identities=28% Similarity=0.470 Sum_probs=203.5
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
...+.||.|+.|.||+|+++ ++.||||+++..+ ..+++-|++++||||+.+.|+|.....++||||||.
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence 34578999999999999986 7899999886443 236788999999999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 661 (796)
.|-|...|+... .+.......|..+||.|+.|||.+ +|||||||.-||||+.+..+||+|||-++....- ..+
T Consensus 196 ~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STk 268 (904)
T KOG4721|consen 196 QGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STK 268 (904)
T ss_pred cccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhh
Confidence 999999998654 377888899999999999999999 9999999999999999999999999999876543 334
Q ss_pred cccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH
Q 003780 662 TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 662 ~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
-.++||..|||||++...+.++|+||||||||||||+||..||.+.+.... +..+-...+.-+ .+...+
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI--------IwGVGsNsL~Lp---vPstcP 337 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI--------IWGVGSNSLHLP---VPSTCP 337 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee--------EEeccCCccccc---CcccCc
Confidence 457899999999999999999999999999999999999999885443211 111111111111 122333
Q ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 742 VLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
..+.-+++.||+-.|..||++.+++.||.-..++.
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 45777899999999999999999999998765543
No 29
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=337.73 Aligned_cols=254 Identities=25% Similarity=0.371 Sum_probs=208.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++...||+|+||.||.|+.+ +|..+|+|++++.........+-++.|-.+|...++|.||+++-.|++.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3578999999999999999999754 699999999999988777777889999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||++||++..+|.+.. .+++..+..++.+++-|++.+|.. |+|||||||+|+|||..|++||+|||++.-+.
T Consensus 219 iMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999998654 488888999999999999999999 99999999999999999999999999985321
Q ss_pred C----------------------CCCC-----c--------------------cccccccCccCccccccCCcCcchhHH
Q 003780 656 S----------------------DSSN-----R--------------------TIVAGTYGYIAPELAYTMVVTEKCDVY 688 (796)
Q Consensus 656 ~----------------------~~~~-----~--------------------~~~~gt~~y~aPE~~~~~~~~~~~DVw 688 (796)
. .... . ...+|||.|+|||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 0000 0 013599999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC--CCCccchhhHHHHHHHHHHHHHcCCCCCCCCC---CHH
Q 003780 689 SFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR--LSPPVDRMVMQDIVLVTTVALACLHSKPKFRP---TMQ 763 (796)
Q Consensus 689 SlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ 763 (796)
|+|||+|||+.|.+||.... .......++.-+ +..+...... .+..++|.+|+. ||++|- .++
T Consensus 373 SLG~ImyEmLvGyPPF~s~t--------p~~T~rkI~nwr~~l~fP~~~~~s---~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSET--------PQETYRKIVNWRETLKFPEEVDLS---DEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhhhccCCCcCccc---HHHHHHHHHHhc-CHHHhcCcccHH
Confidence 99999999999999998432 223333333322 2222111111 346789999999 999996 466
Q ss_pred HHHHH
Q 003780 764 RVCQE 768 (796)
Q Consensus 764 evl~~ 768 (796)
||-+|
T Consensus 441 EIK~H 445 (550)
T KOG0605|consen 441 EIKKH 445 (550)
T ss_pred HHhcC
Confidence 66655
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=339.31 Aligned_cols=251 Identities=30% Similarity=0.459 Sum_probs=214.7
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
..|+..+.||+|.||.||+|. .+.++.||+|++......+. ..++.+|+.++.+++++||.++++.+..+...+++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de--Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE--IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchh--hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 457777899999999999995 55799999999987766543 568999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+.+|++.+.++.... +++..+.-|++++..|+.|+|++ +.+|||||+.||++..+|.+|++|||.+..+...
T Consensus 91 ey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 99999999999986542 47777888999999999999999 9999999999999999999999999999988766
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........|||.|||||++.+..|+.|+||||||++++||.+|.+|+....+. .+.-.+.+..+|..+.
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm---------rvlflIpk~~PP~L~~-- 233 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM---------RVLFLIPKSAPPRLDG-- 233 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc---------eEEEeccCCCCCcccc--
Confidence 65556788999999999999889999999999999999999999998755432 1222333444444433
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++..||+.||+.||+++++++|=
T Consensus 234 -~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 234 -DFSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred -ccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 2334488999999999999999999999883
No 31
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.2e-39 Score=339.27 Aligned_cols=256 Identities=23% Similarity=0.245 Sum_probs=203.1
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||.||+|.. .+|+.||+|.+.............+.+|+.++++++|+||+++++++.+++..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377889999999999999975 5799999999876554333334567899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865322 3488999999999999999999999 99999999999999999999999999998754322
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .........+.... ... ..
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~-~~~---~~ 226 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER-----VKREEVDRRVKEDQ-EEY---SE 226 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc-----hhHHHHHHHhhccc-ccC---Cc
Confidence 223346899999999999999999999999999999999999999743211 11111111111111 111 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPT-----MQRVCQEF 769 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 769 (796)
.....+.+++.+||+.||++||+ +++++++-
T Consensus 227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 12234778999999999999997 78888753
No 32
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=331.84 Aligned_cols=263 Identities=23% Similarity=0.306 Sum_probs=209.5
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhh-----------HHHHHHHHHHHHHhhcCCCceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEET-----------TFFNSFQNEAHVLSKIAHRNIVKLY 564 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~l~ 564 (796)
..++|++.+.||+|.||.|-+|+. .+++.||||++.+...... ...+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 457899999999999999999975 4799999999976543221 1235889999999999999999999
Q ss_pred eEEEec--ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 565 GFCLHK--KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 565 ~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
++..++ +..|||+|||..|.+.+.-. ....++..++++++.++..||+|||.+ +||||||||+|+|++++|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 999765 58999999999998754322 222389999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCC-----CCCccccccccCccCccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccCCCC
Q 003780 643 AFVADFGTARLLDSD-----SSNRTIVAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP 713 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~ 713 (796)
+||+|||.+...... ........|||.|+|||...++. .+.+.||||+||+||+|+.|+.||-+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~------- 321 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD------- 321 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc-------
Confidence 999999999765222 11122356999999999988733 34578999999999999999999873
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
.........++...+..+... +..+.+.++|++||++||++|.+..+|..|........
T Consensus 322 -~~~~~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 322 -DFELELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred -chHHHHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 223344455555555443322 23345789999999999999999999999987766543
No 33
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.5e-40 Score=343.41 Aligned_cols=254 Identities=22% Similarity=0.369 Sum_probs=218.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce-eeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC-MFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~l 575 (796)
.++|...+.+|+|+||.++.++++ +++.|++|.+......+.. .+...+|+.++++++|||||.+.+.+.+++. .+|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 357889999999999999999765 6889999999888776654 3478899999999999999999999999998 999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||+|++||++.+.+.+.+ ...++++.+..++.|++.|+.|||+. +|+|||||+.|||++.+..|||+|||+|+.+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred EEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 999999999999998765 45689999999999999999999988 99999999999999999999999999999998
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.+......+.||+.|+.||.+.+.+|..|+||||+||++|||++-+.+|...+. ...+..+...... +.
T Consensus 158 ~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~-Pl-- 226 (426)
T KOG0589|consen 158 PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYS-PL-- 226 (426)
T ss_pred CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCC-CC--
Confidence 776566778899999999999999999999999999999999999999984322 1222223332222 22
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.....++..++..|++.+|+.||++.+++.+
T Consensus 227 -p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 -PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22334458899999999999999999999987
No 34
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.8e-39 Score=344.01 Aligned_cols=245 Identities=22% Similarity=0.280 Sum_probs=200.3
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
+.||+|+||.||+++. .+|+.||+|++.............+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999975 478999999998654433333457789999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccc
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 663 (796)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999987643 478999999999999999999999 9999999999999999999999999999764333333445
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHH
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (796)
..||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............+ ......
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~~~~~~~~~p-----~~~~~~ 221 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEEIRFP-----RTLSPE 221 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC--------HHHHHHHHHcCCCCCC-----CCCCHH
Confidence 679999999999999999999999999999999999999986321 1112222222221111 112234
Q ss_pred HHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 744 VTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 744 l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
+.+++.+||+.||++|| ++.++++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 77899999999999999 89999876
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.8e-39 Score=338.92 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=204.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|..+ +|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999765 68999999997654433334567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997653 378899999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.......+.
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~~~~~~---- 219 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN--------PFGIYEKILAGKLEFPR---- 219 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCcCCCc----
Confidence 223468999999999998889999999999999999999999987321 11122222222221111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPT-----MQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 769 (796)
.....+.+++.+|++.||.+||+ ++|+++|-
T Consensus 220 -~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 220 -HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred -cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 11234779999999999999995 88888764
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-39 Score=306.18 Aligned_cols=254 Identities=30% Similarity=0.405 Sum_probs=216.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|.||.||.|+. +++-.||+|++.+..........++.+|+++.+.++||||+++++|+.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46899999999999999999974 57889999999988766666667999999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||..+|.++..+..... ..+++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..|++|||.+..-.
T Consensus 101 lEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 999999999999985433 3478888899999999999999999 99999999999999999999999999986533
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.......+||..|.|||...+..++.++|+|++|++.||++.|..||+.. ...+.+..+...+...+.
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~--------~~~etYkrI~k~~~~~p~--- 243 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ--------SHSETYKRIRKVDLKFPS--- 243 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh--------hhHHHHHHHHHccccCCc---
Confidence 34455678999999999999999999999999999999999999999832 233344444443333221
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......++|.+|+..+|.+|.+..|++.+-.
T Consensus 244 --~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 244 --TISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred --ccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 11223678999999999999999999998854
No 37
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=345.34 Aligned_cols=265 Identities=25% Similarity=0.403 Sum_probs=211.6
Q ss_pred HHhcCCccceeeecccceeEEEEEcc--CC--cE-EEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP--NG--KV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g--~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
-..++....+.||+|+||.||+|+++ ++ .. ||||..+..........++|.+|+++|++++|||||+++|++..+
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE 233 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 34456666789999999999999754 23 23 899999864433444578999999999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++|||+|.||+|.+++++.+. .++..++..++.+.|+||+|||++ +++||||.++|+|++.++.+||+|||+
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccc
Confidence 999999999999999999998654 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
++.-..-........-+..|+|||.+..+.+++++|||||||++||+++ |..||.... .......+.....
T Consensus 309 s~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--------~~~v~~kI~~~~~ 380 (474)
T KOG0194|consen 309 SRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--------NYEVKAKIVKNGY 380 (474)
T ss_pred ccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--------HHHHHHHHHhcCc
Confidence 8754311111111224578999999999999999999999999999998 888987332 2222333323333
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
+..... ..+..+..++.+|+..||++||+|.++.+.++......
T Consensus 381 r~~~~~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 381 RMPIPS---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred cCCCCC---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 322222 22344778888999999999999999999998765443
No 38
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.5e-38 Score=336.36 Aligned_cols=263 Identities=23% Similarity=0.313 Sum_probs=200.7
Q ss_pred cCCccceeeecccceeEEEEEccC-----------------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCcee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-----------------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 561 (796)
++|.+.+.||+|+||.||+|..++ +..||+|.+...... ...+.+.+|++++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK--NARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCee
Confidence 578899999999999999997432 346999998765432 2246789999999999999999
Q ss_pred eEEeEEEecceeeEEEeeccCCcHHHHHhhcC----------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 003780 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDY----------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625 (796)
Q Consensus 562 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 625 (796)
++++++...+..++||||+++|+|.+++.... ....+++..+.+++.||+.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99999999999999999999999999986532 113467888999999999999999999 99
Q ss_pred EEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh--CC
Q 003780 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GR 701 (796)
Q Consensus 626 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt--g~ 701 (796)
+||||||+||+++.++.+||+|||+++........ .....++..|+|||++.+..++.++|||||||++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999865432211 122345788999999988889999999999999999987 55
Q ss_pred CCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 702 HPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 702 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.||..... .............................+.+++.+||+.||++|||+.||.+.|++
T Consensus 240 ~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTD-----EQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCH-----HHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 67653221 111111111111111000000011122357899999999999999999999998863
No 39
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=342.84 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=204.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57899999999999999999765 68999999997654433334567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999997643 378888999999999999999999 9999999999999999999999999999866432
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+ .
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~~~p--~-- 236 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT--------PFRIYEKILAGRLKFP--N-- 236 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC--------HHHHHHHHhcCCcCCC--C--
Confidence 223569999999999999889999999999999999999999986321 1112222222222111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPT-----MQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 768 (796)
.....+.+++.+||+.||.+||+ ++++++|
T Consensus 237 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 -WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11224678999999999999996 6777766
No 40
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-40 Score=311.24 Aligned_cols=260 Identities=24% Similarity=0.343 Sum_probs=210.3
Q ss_pred HhcCCccceeeecccceeEEEE-EccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.++.|++.+.||+|.|+.||++ ..++|+.+|+|.+........ ..+++.+|+.+.+.++||||+++.+.+.+.+..|+
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 3567888899999999999999 456899999999877665544 36789999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~ 652 (796)
|+|+|.|++|..-+-.. ...++..+-..++||+++|.|+|.+ +|||||+||+|+++.. ...+|++|||+|.
T Consensus 88 vFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 99999999987554432 3477888889999999999999999 9999999999999954 3458999999999
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
.+. +........|||+|||||+....+|+..+|||+.||+||-|+.|..||.+. .....+..++.....-+
T Consensus 162 ~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--------~~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 162 EVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYEQIKAGAYDYP 232 (355)
T ss_pred EeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--------cHHHHHHHHhccccCCC
Confidence 887 445555678999999999999999999999999999999999999998732 22223333332222111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.+......++..+++.+||..||.+|.|+.|.+.|-.-+.
T Consensus 233 -~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 233 -SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 1111122234678999999999999999999998865443
No 41
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7e-39 Score=314.77 Aligned_cols=256 Identities=24% Similarity=0.252 Sum_probs=204.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 575 (796)
+.|+..+.|++|+||.||+|+.+ +++.||+|+++.....+.- .-.-.+|+.++.+.+|||||.+-++... -+..|+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GF-PItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGF-PITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCC-cchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 45778899999999999999754 7899999999987744322 2245789999999999999999988754 467999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||++. +|.++++... +.+...++..++.|+++|++|||+. .|+|||||++|+|++..|.+||+|||+|+.++
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999988 8999998765 3588899999999999999999999 99999999999999999999999999999998
Q ss_pred CCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH-------hhcC
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID-------VLDS 727 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~ 727 (796)
.+....+..+-|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|...... .+-..+.. .+++
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-----dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-----DQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-----HHHHHHHHHhCCCccccCC
Confidence 887777778899999999998865 5999999999999999999999887643321 00000100 0001
Q ss_pred CC-------------------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 RL-------------------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 ~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.. ...+.... -...-.+++..++..||.+|-|+.|.++|
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~--lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALS--LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccc--cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00 00000000 01234578999999999999999999987
No 42
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.7e-38 Score=343.27 Aligned_cols=256 Identities=21% Similarity=0.269 Sum_probs=205.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36899999999999999999765 58999999998664433334567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997543 378899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC-Cccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS-PPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 736 (796)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... ..... +.....
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~-~~~~~~~~~~~~ 225 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-----NETWENLKYW-KETLQRPVYDDP 225 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH-----HHHHHHHHhc-cccccCCCCCcc
Confidence 22345699999999999998999999999999999999999999873221 0000011110 11111 111100
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+.+++.+|++.+|++||+++|++++-
T Consensus 226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 011233577899999999999999999999873
No 43
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.7e-38 Score=337.85 Aligned_cols=245 Identities=23% Similarity=0.284 Sum_probs=199.5
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
+.||+|+||.||+++. .+|+.||+|++.............+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999975 478999999998654333333557788999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccc
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 663 (796)
+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++............
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9998887543 488999999999999999999999 9999999999999999999999999998764333333344
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHH
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (796)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...............+ ......
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~~~~~~~~~p-----~~~~~~ 221 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEEIRFP-----RTLSPE 221 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCCCCCC-----CCCCHH
Confidence 569999999999999899999999999999999999999986321 1112222222222111 111234
Q ss_pred HHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 744 VTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 744 l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
+.+++.+||+.||++|| ++.+++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 77899999999999998 89998876
No 44
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.7e-38 Score=337.18 Aligned_cols=243 Identities=24% Similarity=0.307 Sum_probs=197.7
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||.||+|+.. +++.||+|++.............+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 6889999999765433333456788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 665 (796)
.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997643 388999999999999999999999 999999999999999999999999999986443333334467
Q ss_pred cccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHH
Q 003780 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745 (796)
Q Consensus 666 gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 745 (796)
||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............+ ......+.
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~~ 221 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--------VNEMYRKILQEPLRFP-----DGFDRDAK 221 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcCCCCCC-----CcCCHHHH
Confidence 9999999999999999999999999999999999999987321 1122222222222111 11223477
Q ss_pred HHHHHcCCCCCCCCCC---HHHHHHH
Q 003780 746 TVALACLHSKPKFRPT---MQRVCQE 768 (796)
Q Consensus 746 ~li~~cl~~dP~~RPs---~~evl~~ 768 (796)
+++.+||+.||++||+ +.|++.|
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 8999999999999975 6777765
No 45
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-39 Score=320.15 Aligned_cols=265 Identities=24% Similarity=0.315 Sum_probs=207.2
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-----c
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-----K 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~ 570 (796)
....|...+.||+|+||.|+.+.. .+|+.||||++........ ..++..+|+++++.++|+||+.+.+.+.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~-~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQI-DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchH-HHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 455677788999999999999964 5799999999986544432 35678899999999999999999998865 3
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...|+|+|+|+ .+|...++.... ++......+++|+++||.|+|+. +|+||||||+|++++.+...||+|||+
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 57899999994 489999986543 88999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC--CCCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchh
Q 003780 651 ARLLDSD--SSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQ 717 (796)
Q Consensus 651 a~~~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~ 717 (796)
|+..... ....+....|.+|+|||.+. ...|+.+.||||.||++.||++|+.-|...+.+ ..++...
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987642 23345667899999999875 457999999999999999999999888754332 1111111
Q ss_pred hh--------HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 KI--------MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. .+...+......++............+++.+||..||.+|+|++|.++|-
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 00 01111222222222222233344578999999999999999999999984
No 46
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=340.00 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=207.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 575 (796)
.++|...++||+|.||+|+.+..+ +++.+|||++++...-.....+..+.|.+++.... ||.+++++.+++.+++.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 468999999999999999999765 68899999999988776666788999999998885 9999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||..||++..+.+. ..+++..+.-++..|+.||.|||++ +||+||||.+|||+|.+|++||+|||+++..-
T Consensus 447 vmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999995544432 3489999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
......++.+|||.|+|||++.+..|+.++|.|||||++|||+.|..||.. ..+++....++......+.
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g--------ddEee~FdsI~~d~~~yP~-- 589 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG--------DDEEEVFDSIVNDEVRYPR-- 589 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHhcCCCCCCC--
Confidence 445566778999999999999999999999999999999999999999973 2334444444444332221
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTM 762 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 762 (796)
--..+...++.+++..+|++|--+
T Consensus 590 ---~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 ---FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---cccHHHHHHHHHHhccCcccccCC
Confidence 112346689999999999999755
No 47
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.3e-38 Score=338.02 Aligned_cols=245 Identities=22% Similarity=0.273 Sum_probs=199.5
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
+.||+|+||.||+++. .+|+.||+|++.............+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999975 468999999998654433334567889999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccc
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 663 (796)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 9998887543 488999999999999999999999 9999999999999999999999999998764333333344
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHH
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (796)
..||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ............... . ......
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~--------~~~~~~~~~~~~~~~--p---~~~~~~ 221 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEDIKF--P---RTLSAD 221 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC--------HHHHHHHhccCCccC--C---CCCCHH
Confidence 579999999999998899999999999999999999999986321 111111111111111 1 111234
Q ss_pred HHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 744 VTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 744 l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
+.+++.+||+.||++|| ++.|++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 77899999999999997 89999877
No 48
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=303.25 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=207.5
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|.+.+.+|+|||+-||.++ ..+++.||+|++......+ .+...+|++..++++||||++++++...+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~---~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQED---IEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHH---HHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4689999999999999999996 5679999999998877443 467899999999999999999999875443
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcc-cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEA-VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
..|++++|...|+|.+.+.+.... ..+++.+.++|+.+|++||++||+. .++.+||||||.||++++.+.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 589999999999999999865433 3689999999999999999999997 34699999999999999999999999999
Q ss_pred ccccCCCCCC---------ccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhh
Q 003780 651 ARLLDSDSSN---------RTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQK 718 (796)
Q Consensus 651 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~ 718 (796)
++...-.-.. .....+|..|+|||.+. +...++++|||||||++|+|+.|..||+..-.. ..+.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-GgSl--- 251 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-GGSL--- 251 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-CCeE---
Confidence 9865322111 12234789999999886 445778999999999999999999999843221 0000
Q ss_pred hHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 719 IMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
...+....+..+... ...+.+.+++++|+++||.+||++.+++..+...
T Consensus 252 --aLAv~n~q~s~P~~~---~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 252 --ALAVQNAQISIPNSS---RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --EEeeeccccccCCCC---CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111122222222211 1334588999999999999999999999988653
No 49
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.5e-38 Score=337.50 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=199.4
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999754 6889999999876544444456788899888877 799999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99998887543 488999999999999999999999 999999999999999999999999999976433333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH-hhcCCCCCccchhhHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID-VLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 741 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||................... ........+ ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p-----~~~~ 229 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-----RSLS 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC-----CCCC
Confidence 4679999999999999999999999999999999999999996432221111111111222 222222111 1122
Q ss_pred HHHHHHHHHcCCCCCCCCCC------HHHHHHH
Q 003780 742 VLVTTVALACLHSKPKFRPT------MQRVCQE 768 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs------~~evl~~ 768 (796)
..+.+++.+||+.||++||+ +.++++|
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 34778999999999999998 4677665
No 50
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-38 Score=339.82 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=204.1
Q ss_pred hcCCccceeeecccceeEEEEEcc--CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|..+ ++..||+|++...........+.+.+|+++++.++||||+++++++..++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 357999999999999999999754 346899999976544333345678899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999998653 388999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+ .
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~p--~ 249 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE--------PLLIYQKILEGIIYFP--K 249 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC--------HHHHHHHHhcCCCCCC--C
Confidence 32 234569999999999998889999999999999999999999987322 1122222222222111 1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.....+.+++.+|++.||++|+ +++|+++|
T Consensus 250 ---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 250 ---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1122367899999999999995 89998877
No 51
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.5e-38 Score=342.79 Aligned_cols=258 Identities=25% Similarity=0.370 Sum_probs=203.7
Q ss_pred hcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 570 (796)
.++|++.+.||+|+||.||+|.. .++..||||+++...... ..+.+.+|++++..+ +||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLT--EREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcH--HHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45789999999999999999953 246689999997554322 235788999999999 899999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCc--------------------------------------------------------
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYE-------------------------------------------------------- 594 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 594 (796)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999865321
Q ss_pred ----------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 595 ----------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 595 ----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
...+++..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 12478889999999999999999998 99999999999999999999999999998664332
Q ss_pred CC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 659 SN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 659 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .......+..........
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 340 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV--------DSKFYKMIKEGYRMLSPE 340 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--------hHHHHHHHHhCccCCCCC
Confidence 21 112335667999999999999999999999999999998 8888863211 111222222222211111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....++.+++.+|++.||++||+++||++.|++
T Consensus 341 ---~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 341 ---CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 112347899999999999999999999999985
No 52
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.9e-38 Score=337.00 Aligned_cols=253 Identities=21% Similarity=0.346 Sum_probs=200.6
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|+++..........+.+..|..++.++ +||||+++++++..+...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999754 6899999999876544444456788999999988 699999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99998887543 489999999999999999999999 999999999999999999999999999875333333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhh-HHHHhhcCCCCCccchhhHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKI-MLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
...||+.|+|||++.+..++.++||||+||++|+|++|+.||+.............. ............+ ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~ 229 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP-----RSLS 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC-----CCCC
Confidence 467999999999999999999999999999999999999999743322211111111 1222222222111 1112
Q ss_pred HHHHHHHHHcCCCCCCCCCC------HHHHHHH
Q 003780 742 VLVTTVALACLHSKPKFRPT------MQRVCQE 768 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs------~~evl~~ 768 (796)
..+.+++.+|++.||.+||+ ++++++|
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 34778999999999999997 6777765
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-37 Score=329.77 Aligned_cols=262 Identities=22% Similarity=0.274 Sum_probs=198.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|++....... ....+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC--cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 57999999999999999999754 68999999987543221 1346778999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++ +|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99985 8988886543 2478889999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchh------hhH
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQ------KIM 720 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~------~~~ 720 (796)
........+++.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.... ...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 333334568999999998865 568899999999999999999999986322100 000000 000
Q ss_pred HHHhhcCCCCC-ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 721 LIDVLDSRLSP-PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 721 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.... ..............+++.+|++.||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 0000001112347799999999999999999999876
No 54
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=343.04 Aligned_cols=267 Identities=30% Similarity=0.488 Sum_probs=217.4
Q ss_pred cCCcccHHHHHHHhcC---------CccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHH
Q 003780 485 YDGRIAFEDIIKATED---------FDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHV 551 (796)
Q Consensus 485 ~~~~~~~~~~~~~~~~---------~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~ 551 (796)
+.+..+|||-.++... ..+.++||.|.||.||+|+++ ....||||.++....+.. ..+|..|+.+
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekq--rrdFL~EAsI 683 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQ--RRDFLSEASI 683 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHH--Hhhhhhhhhh
Confidence 4455666655544433 456789999999999999865 245699999987765543 5789999999
Q ss_pred HhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCC
Q 003780 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDIS 631 (796)
Q Consensus 552 l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlk 631 (796)
|.++.||||+++.|+.......+||+|||++|+|+.+|+.+. ..+.+.+..-+.++||.|+.||-+. +.|||||.
T Consensus 684 MGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLA 758 (996)
T KOG0196|consen 684 MGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLA 758 (996)
T ss_pred cccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhh
Confidence 999999999999999999999999999999999999998764 3488999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeeeccccccCCCCCCc-ccccc--ccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccc
Q 003780 632 SNNILLNSKLEAFVADFGTARLLDSDSSNR-TIVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELL 707 (796)
Q Consensus 632 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~g--t~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~ 707 (796)
++|||++.+...||+|||+++.+.++.... +...| +..|.|||.+.-.+++.++|||||||++||.++ |.+||=++
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm 838 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 838 (996)
T ss_pred hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence 999999999999999999999887655322 22223 468999999999999999999999999999875 88886432
Q ss_pred ccCCCCCchhhhHHHHh-hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 708 SSLSSPSSDQKIMLIDV-LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 708 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.++..+..+ .+-+++++ ++.+..+.+|+..||++|-.+||.+.||+..|..
T Consensus 839 --------SNQdVIkaIe~gyRLPpP-----mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 839 --------SNQDVIKAIEQGYRLPPP-----MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred --------chHHHHHHHHhccCCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 222233222 22334433 3445568899999999999999999999999875
No 55
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=356.99 Aligned_cols=257 Identities=30% Similarity=0.488 Sum_probs=207.1
Q ss_pred cCCccceeeecccceeEEEEEcc--CCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP--NGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
...+..+.||+|+||.||+|... +|. .||||.+.+..... ...+|.+|..+|+.++|||||+++|.|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~--~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQ--EVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHH--HHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 44566788999999999999754 343 48999888765443 35799999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcC----cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
.++++|||++|+|..++++.. +...+...+.+.++.|||+|+.||+++ ++|||||.++|+|++....+||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999998762 245688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCc-ccc-ccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhh
Q 003780 649 GTARLLDSDSSNR-TIV-AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 649 g~a~~~~~~~~~~-~~~-~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
|+|+.+-...+.. ... .-...|||||.+..+.++.|+|||||||++||++| |..||...+ +.+....++
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~--------n~~v~~~~~ 918 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS--------NFEVLLDVL 918 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc--------hHHHHHHHH
Confidence 9999554333222 111 23468999999999999999999999999999998 778876322 223333222
Q ss_pred -cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 726 -DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 726 -~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..++.++. +. +..+.+++..||+.+|++||++..+++.+....
T Consensus 919 ~ggRL~~P~--~C---P~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 919 EGGRLDPPS--YC---PEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred hCCccCCCC--CC---ChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 23343322 12 234779999999999999999999999876543
No 56
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-37 Score=341.17 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=204.5
Q ss_pred HhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 569 (796)
..++|++.+.||+|+||.||+|.. .++..||+|++......+ ..+.+.+|+++++.+ +||||+++++++..
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD--EREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH--HHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 345799999999999999999863 234579999997654332 245788999999999 89999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCc-------------------------------------------------------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------- 594 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 594 (796)
.+..++||||+++|+|.++++....
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 9999999999999999999864311
Q ss_pred ------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--
Q 003780 595 ------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN-- 660 (796)
Q Consensus 595 ------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-- 660 (796)
...+++..+.+++.||++||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 12367888999999999999999999 9999999999999999999999999999865432211
Q ss_pred ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 661 RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 661 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ...................
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~--------~~~~~~~~~~~~~~~~~~~--- 339 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV--------NSKFYKMVKRGYQMSRPDF--- 339 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc--------cHHHHHHHHcccCccCCCC---
Confidence 112235567999999988899999999999999999997 9999874221 1112222222222111111
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
....+.+++.+||+.||++||++.++++.|++.
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 123578999999999999999999999999864
No 57
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=317.01 Aligned_cols=260 Identities=24% Similarity=0.314 Sum_probs=205.1
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCc-eeeEEeEEEecc-----
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN-IVKLYGFCLHKK----- 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~----- 571 (796)
..|+..+.||+|+||+||+|+. .+|+.||+|++.-....+ .......+|+.++++++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-G~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-GVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccccc-CCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4566677899999999999964 478999999998776542 23456789999999999999 999999998877
Q ss_pred -eeeEEEeeccCCcHHHHHhhcCcc-cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDYEA-VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
..++|+||++. +|..++...... ..++...+..++.|+++||+|||++ +|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 88999999977 899999876532 3467788999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC-
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS- 727 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 727 (796)
+|+...-+....+...+|.+|+|||++.+. .|++..||||+||+++||++++.-|...... .+-..+.+.+..
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-----~ql~~If~~lGtP 240 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-----DQLFRIFRLLGTP 240 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-----HHHHHHHHHcCCC
Confidence 999877555556667799999999998876 6899999999999999999998888743321 111111111000
Q ss_pred ----------------CCCCc-----cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 ----------------RLSPP-----VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 ----------------~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..... .............+++.+|++.+|.+|.|++.+++|
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000 000001111347789999999999999999999998
No 58
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.2e-37 Score=329.97 Aligned_cols=260 Identities=25% Similarity=0.321 Sum_probs=199.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +++.||+|++........ ...+.+|+.+++.++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT--PFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc--chhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 468999999999999999999765 689999999875543221 23577899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||++ ++|.+++.... ..++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 57877776542 3478888999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC--------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS-------- 727 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 727 (796)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .............
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI----QDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhCCCChhhccc
Confidence 3333344568999999998765 45788999999999999999999999743211 0000000000000
Q ss_pred -----CCCCc-c----chhhH------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 728 -----RLSPP-V----DRMVM------QDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 728 -----~~~~~-~----~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...+. . ..... .....+.+++.+|++.||++|||++|+++|-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~ 289 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE 289 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence 00000 0 00000 0112467899999999999999999999864
No 59
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=347.56 Aligned_cols=266 Identities=24% Similarity=0.344 Sum_probs=211.0
Q ss_pred hcCCccceeeecccceeEEEEEccCC-cEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeE-EEe-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNG-KVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGF-CLH----- 569 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~-~~~----- 569 (796)
..++++.+.|.+|||+.||.|+...+ ..||+|++.... +...+.+.+|+++|++|+ |||||.+++. ...
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d---e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND---EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC---HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34677889999999999999986655 999999987663 344678999999999997 9999999993 321
Q ss_pred -cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 570 -KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 570 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
..+++|.||||++|.|-+++..+.... +++.++++|+.|+++|+++||.. .|+|||||||-+|||++.+++.|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 236889999999999999998765544 99999999999999999999985 778999999999999999999999999
Q ss_pred ccccccCCCCCC-cc--------ccccccCccCcccc---ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCch
Q 003780 649 GTARLLDSDSSN-RT--------IVAGTYGYIAPELA---YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSD 716 (796)
Q Consensus 649 g~a~~~~~~~~~-~~--------~~~gt~~y~aPE~~---~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~ 716 (796)
|.|.-....... .. ...-|+.|+|||++ .+..+++|+|||++||+||.|+....||+....+
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------ 264 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------ 264 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------
Confidence 999754332211 11 12368999999976 4778999999999999999999999999953322
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCcccccc
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEIS 784 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~ 784 (796)
.++......+.. ......+.+||..||++||++||++.+|+.++.++... ..+..++.
T Consensus 265 ------aIlng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~-~~~~~~~~ 322 (738)
T KOG1989|consen 265 ------AILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK-PCPIPDIY 322 (738)
T ss_pred ------eEEeccccCCCC---ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC-CCCccccc
Confidence 233333332221 23344588999999999999999999999999776532 23444444
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.2e-37 Score=332.72 Aligned_cols=263 Identities=24% Similarity=0.308 Sum_probs=205.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+++.+ +|..||+|.+...... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999765 6889999998765322 2346799999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999997643 3788999999999999999999852 699999999999999999999999999976543
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC------C-----C-----------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS------P-----S----------- 714 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~------~-----~----------- 714 (796)
. ......|++.|+|||++.+..++.++|||||||++|||++|+.||........ . .
T Consensus 157 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred c--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 2 22334689999999999998999999999999999999999999863211000 0 0
Q ss_pred ---------------chhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 715 ---------------SDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 715 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
........+.+.....+... .......+.+++.+||+.||++|||++|++++..-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP--NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCC--CccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 00000000000000011100 00123358899999999999999999999998643
No 61
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.9e-37 Score=321.90 Aligned_cols=263 Identities=20% Similarity=0.282 Sum_probs=211.2
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||||.+......+......+.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999754 78999999887654444444567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998886432 223478889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........+.....++..
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-- 229 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLFSLCQKIEQCDYPPLP-- 229 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-------cHHHHHHHHhcCCCCCCC--
Confidence 33323334588899999999888889999999999999999999999863211 111122222221111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.......+.+++.+||+.+|++||++.+|++.+++.+
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1122345889999999999999999999999998764
No 62
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.1e-38 Score=386.12 Aligned_cols=318 Identities=34% Similarity=0.509 Sum_probs=223.6
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEe
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNL 152 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 152 (796)
++..|+++++.+.+.++. .+..+++|++|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..+.++++|+.|+|
T Consensus 261 ~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPP-SIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCEEECcCCeeeccCch-hHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 455566666666555443 2455556666666666665555555555555666665555555555555555555555555
Q ss_pred cCCCCCCCCchhhhccCccceeeccccccCCC------------------------CCccccCCCCccEEEcccccccCc
Q 003780 153 KGNNLNGAIPSSLCQLTKLITMALSRNGLHGP------------------------IPSAIGDLNNLLILSLDSNKLSGM 208 (796)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------------------~p~~~~~l~~L~~L~L~~N~l~~~ 208 (796)
++|++++.+|..++.+++|+.|+|++|++++. +|..+..+++|+.|+|++|++++.
T Consensus 340 ~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~ 419 (968)
T PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE 419 (968)
T ss_pred cCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeE
Confidence 55555555555555555555555555555544 444455555555555555555555
Q ss_pred chhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccc
Q 003780 209 LHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRL 288 (796)
Q Consensus 209 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 288 (796)
.|..+.++++|+.|++++|.+++.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|+|++|++++.+|..+.++
T Consensus 420 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l 498 (968)
T PLN00113 420 LPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSL 498 (968)
T ss_pred CChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhh
Confidence 55555555566666666666665555555566666666666666666666544 34678888888899999999999999
Q ss_pred cccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEe
Q 003780 289 SQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDL 367 (796)
Q Consensus 289 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l 367 (796)
++|++|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+ .+..|+.|++
T Consensus 499 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 578 (968)
T PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578 (968)
T ss_pred hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999887 4789999999
Q ss_pred cccccCCCCCcc--ccccccccccCCC
Q 003780 368 SHNKLNGTIPPF--LYHRFPLDLSYND 392 (796)
Q Consensus 368 ~~N~l~~~~p~~--~~~~~~l~l~~N~ 392 (796)
++|+++|.+|.. +.......+.+|.
T Consensus 579 s~N~l~~~~p~~~~~~~~~~~~~~~n~ 605 (968)
T PLN00113 579 SHNHLHGSLPSTGAFLAINASAVAGNI 605 (968)
T ss_pred cCCcceeeCCCcchhcccChhhhcCCc
Confidence 999999999964 2222334455664
No 63
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.5e-37 Score=328.62 Aligned_cols=258 Identities=25% Similarity=0.325 Sum_probs=200.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|++....... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36899999999999999999765 68899999997654332 22457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999998776554322 2488899999999999999999999 9999999999999999999999999999876432
Q ss_pred CC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh-----------
Q 003780 658 SS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL----------- 725 (796)
Q Consensus 658 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 725 (796)
.. ......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ..........
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-----DQLFTIQKVLGPLPAEQMKLF 228 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhhCCCCHHHHHhh
Confidence 22 223356899999999999888999999999999999999999999743210 0000000000
Q ss_pred --cCC---CC-Ccc-c------hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 --DSR---LS-PPV-D------RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 --~~~---~~-~~~-~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.. .. +.. . .........+.+++.+||+.||++|||++|+++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 229 YSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00 000 0 0000112358899999999999999999999875
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.2e-38 Score=341.05 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=206.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+.. +|+.||+|++...........+.+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46899999999999999999765 79999999998655433334567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999865 3488999999999999999999998 9999999999999999999999999999866543
Q ss_pred C-----------------------------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 658 S-----------------------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 658 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 12233568999999999999999999999999999999999999987322
Q ss_pred cCCCCCchhhhHHHHhhc--CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLD--SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT-MQRVCQEF 769 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L 769 (796)
.......+.. .....+... .....+.+++.+|++ ||.+||+ ++|++++.
T Consensus 235 --------~~~~~~~i~~~~~~~~~p~~~---~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 235 --------LQETYNKIINWKESLRFPPDP---PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred --------HHHHHHHHhccCCcccCCCCC---CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 1112222222 111111111 023347789999997 9999999 99999874
No 65
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.3e-37 Score=333.83 Aligned_cols=245 Identities=22% Similarity=0.353 Sum_probs=197.2
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 6899999999765433333345677888888876 699999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999887653 388999999999999999999999 999999999999999999999999999876443333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+ . ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~~~--~---~~~~ 221 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDEVVYP--T---WLSQ 221 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhcCCCCCC--C---CCCH
Confidence 4679999999999998899999999999999999999999997322 1122222222222111 1 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCH------HHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTM------QRVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~------~evl~~ 768 (796)
.+.+++.+|++.||++||++ +++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 47789999999999999998 666655
No 66
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.9e-37 Score=325.88 Aligned_cols=256 Identities=23% Similarity=0.254 Sum_probs=201.2
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||.||+++.+ +|+.||+|++...........+.+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999754 6999999999764433322234566799999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 665 (796)
.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 98886543 23488999999999999999999999 99999999999999999999999999998664322 223346
Q ss_pred cccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHH
Q 003780 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745 (796)
Q Consensus 666 gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 745 (796)
|+..|+|||++.+..++.++||||+||++|||++|+.||..... ..................... .....+.
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 227 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE----KVAKEELKRRTLEDEVKFEHQ----NFTEESK 227 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc----hhhHHHHHHHhhccccccccc----cCCHHHH
Confidence 89999999999988899999999999999999999999863221 011111122222222211111 1223478
Q ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 746 TVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 746 ~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
+++.+||+.||++||+++|+++++..+.+.
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred HHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 999999999999999998888777766544
No 67
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-37 Score=327.75 Aligned_cols=250 Identities=24% Similarity=0.293 Sum_probs=199.0
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||+||++..+ +|+.||+|.+...........+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999754 7899999999765544433456778899999999999999999999999999999999999999
Q ss_pred HHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcccc
Q 003780 586 FCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIV 664 (796)
Q Consensus 586 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 664 (796)
.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||.+.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 98875432 234589999999999999999999999 99999999999999999999999999998765443333445
Q ss_pred ccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHH
Q 003780 665 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLV 744 (796)
Q Consensus 665 ~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 744 (796)
.|++.|+|||++.+..++.++|||||||++|||++|+.||...... ................ . .......+
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~--~---~~~~~~~~ 228 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRILNDSVT--Y---PDKFSPAS 228 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc----hhHHHHHHhhcccCCC--C---cccCCHHH
Confidence 6899999999999999999999999999999999999998742211 1111111111111111 1 11123347
Q ss_pred HHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 745 TTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 745 ~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.+++.+|++.||++|| +++++++|
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 7899999999999999 66777765
No 68
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.2e-37 Score=338.25 Aligned_cols=253 Identities=25% Similarity=0.323 Sum_probs=197.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+.+ +++.||+|++.............+.+|+.++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47899999999999999999654 68999999997654443344567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997643 488999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 003780 658 SS-----------------------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702 (796)
Q Consensus 658 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~ 702 (796)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0123469999999999999899999999999999999999999
Q ss_pred CCcccccCCCCCchhhhHHHHhhcC--CCCCccchhhHHHHHHHHHHHHHcCC--CCCCCCCCHHHHHHH
Q 003780 703 PGELLSSLSSPSSDQKIMLIDVLDS--RLSPPVDRMVMQDIVLVTTVALACLH--SKPKFRPTMQRVCQE 768 (796)
Q Consensus 703 p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~ 768 (796)
||.... .......+... ....+... .......+++.+|+. .++..||+++|+++|
T Consensus 235 Pf~~~~--------~~~~~~~i~~~~~~~~~p~~~---~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 235 PFCSET--------PQETYKKVMNWKETLIFPPEV---PISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCC--------HHHHHHHHHcCcCcccCCCcC---CCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 997321 11122222211 11111000 011235566666443 233456999999987
No 69
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.3e-37 Score=332.85 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=197.0
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHH---hhcCCCceeeEEeEEEecceeeEE
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVL---SKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
|++.+.||+|+||.||+|..+ +|+.||||++...........+.+..|++++ +.++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999754 6899999999765433323345566666554 567899999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|..++++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888643 489999999999999999999999 999999999999999999999999999875433
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||.... .......+.......+ .
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~~~~~p--~- 222 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD--------EEEVFDSIVNDEVRYP--R- 222 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCC--C-
Confidence 3333445679999999999999899999999999999999999999987321 1112222222221111 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.....+.+++.+||+.||.+|| ++.+++++
T Consensus 223 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 223 --FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred --CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1123467899999999999999 56777665
No 70
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-37 Score=333.03 Aligned_cols=246 Identities=24% Similarity=0.345 Sum_probs=198.4
Q ss_pred eeeecccceeEEEEEc----cCCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 505 YCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
+.||+|+||.||+++. .+++.||+|++....... ......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999964 358899999997654321 22234678899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++|+|.+++.+.. .+.+..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999987643 377888889999999999999999 999999999999999999999999999875443333
Q ss_pred CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
......|++.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~--------~~~~~~~~~~~~~~~~~-----~ 222 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN--------RKKTIDKILKGKLNLPP-----Y 222 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCC-----C
Confidence 3334569999999999998889999999999999999999999987321 12222333332221111 1
Q ss_pred HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 740 DIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
....+.+++.+|++.||++|| ++.+++++-
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 123477999999999999999 788888763
No 71
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.3e-38 Score=336.11 Aligned_cols=245 Identities=22% Similarity=0.279 Sum_probs=198.7
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
+.||+|+||.||++.. .+|+.||+|++.............+..|++++..++||||+++.+++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999965 478999999998654433333457788999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
+|..++.+.. .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 9998887543 48899999999999999999997 6 999999999999999999999999999875433333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+ .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~--------~~~~~~~i~~~~~~~p-----~~~~~ 221 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEEIRFP-----RTLSP 221 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC--------HHHHHHHHhcCCCCCC-----CCCCH
Confidence 4569999999999999899999999999999999999999986321 1111122222211111 11123
Q ss_pred HHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 743 LVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.+.+++.+|++.||++|+ +++++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 477899999999999996 89999877
No 72
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.5e-37 Score=318.64 Aligned_cols=250 Identities=26% Similarity=0.433 Sum_probs=202.0
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
++|++.+.||+|+||.||+++.+++..+|+|.+...... .+++.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 468888999999999999999888889999988754432 2468889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999999875432 478999999999999999999999 99999999999999999999999999998654322
Q ss_pred CC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 659 SN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 659 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. .....++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+... .......
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--------~~~~~~~i~~~-~~~~~~~- 224 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--------NYEVVEMISRG-FRLYRPK- 224 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHCC-CCCCCCC-
Confidence 21 112235568999999988889999999999999999999 899986321 11112222111 1111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++||+++|+++.|
T Consensus 225 --~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 --LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1123478999999999999999999999876
No 73
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.7e-37 Score=320.40 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=202.6
Q ss_pred cCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||.||+|..+ .+..||+|.++...... ..+.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK--QRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH--HHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 46889999999999999999643 46789999998654332 2457889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999997643 2488999999999999999999999 9999999999999999999999999987653
Q ss_pred CCCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 655 DSDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 655 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||..... ...... +......+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--------~~~~~~-~~~~~~~~ 228 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--------QDVIKA-VEDGFRLP 228 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHH-HHCCCCCC
Confidence 322111 111234678999999999999999999999999999775 9999864221 111111 12211111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.. ......+.+++.+||+.+|++||+++|+.+.|.+.
T Consensus 229 ~~---~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 229 AP---RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC---CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 11233578899999999999999999999988653
No 74
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.6e-38 Score=340.29 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=194.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+++++.++|+||+++++++..++..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHED--TVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcH--HHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 34667788999999999999754 7899999998654322 23467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+.. ...+..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 152 EFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred ecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999986432 246677889999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
........||..|+|||++.. ...+.++|||||||++|||++|+.||..... .. .......... .....
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~----~~-~~~~~~~~~~-~~~~~ 295 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ----GD-WASLMCAICM-SQPPE 295 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----cc-HHHHHHHHhc-cCCCC
Confidence 333334569999999998743 2345689999999999999999999872211 11 1111111111 11111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. ......+.+++.+||+.||++||+++|+++|-
T Consensus 296 ~~---~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 296 AP---ATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred CC---CccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 11 11223478999999999999999999999984
No 75
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.7e-37 Score=322.87 Aligned_cols=249 Identities=33% Similarity=0.541 Sum_probs=192.7
Q ss_pred cceeeecccceeEEEEEcc-----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 503 IKYCIGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.+.||.|.||.||+|.+. .+..|+||.+......+ ..+.+.+|++.+++++||||++++|++...+..++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE--EEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH--HHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc--cceeeeecccccccccccccccccccccccccccccc
Confidence 4678999999999999765 36789999996543322 2578999999999999999999999999888899999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.++++.. ....+++..+.+|+.|||+||+|||+. +++|+||+++||+++.++.+||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 999999999999876 223489999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 658 SSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... .....+...|+|||.+.+..++.++||||||+++|||++ |+.||... ......... .........
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--------~~~~~~~~~-~~~~~~~~~ 227 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--------DNEEIIEKL-KQGQRLPIP 227 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--------CHHHHHHHH-HTTEETTSB
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-cccccceec
Confidence 211 223346778999999998889999999999999999999 67887632 112222222 222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .....+.+++..||+.||++||++.++++.|
T Consensus 228 ~---~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 D---NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp T---TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c---chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 1223477999999999999999999999876
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-37 Score=340.54 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=202.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+.. +|+.||||++.............+.+|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999764 68999999997654333334567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997643 388999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC--------------------------------------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh
Q 003780 658 SS--------------------------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699 (796)
Q Consensus 658 ~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt 699 (796)
.. ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999998899999999999999999999
Q ss_pred CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH
Q 003780 700 GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEF 769 (796)
Q Consensus 700 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~L 769 (796)
|+.||..... ......+........... .......+.+++.+|+. +|.+|++ ++|++++-
T Consensus 235 G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 235 GYPPFCSDNP--------QETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred CCCCCCCCCH--------HHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 9999973221 112222222111111000 00112346788999996 8999997 99998863
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-37 Score=331.25 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=199.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC-CceeeEEeEEEecceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-RNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lV~ 577 (796)
+|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+..|.+++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4888999999999999999755 578999999986543333335678889999999976 56889999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999987543 378899999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........||+.|+|||++.+..++.++||||+||++|||+||+.||.... .......+.......+ .
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~~~~~~~--~-- 222 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--------EDELFQSIMEHNVSYP--K-- 222 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCCC--C--
Confidence 333444569999999999999899999999999999999999999987321 1222222222222111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTM-----QRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 768 (796)
.....+.+++.+|++.||.+||+. +++.++
T Consensus 223 -~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 223 -SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112347789999999999999986 455544
No 78
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=300.79 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=208.3
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchh-----hHHHHHHHHHHHHHhhcC-CCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEE-----TTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~ 570 (796)
-+.|...+.+|.|..++|-++. .++|.++|+|++....... ....+.-.+|+.+++++. ||+|+++.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 4567778899999999999885 4578999999987543322 223456688999999995 99999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++|+|.|+.|.|++++... ..++++...+|+.|+.+|++|||.. .||||||||+|||++++.++||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999854 4589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
|+.+.+. ......+|||+|+|||.+.. ..|+..+|+|++||++|.++.|..||-.. .+..++..+
T Consensus 170 a~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR~I 240 (411)
T KOG0599|consen 170 ACQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLRMI 240 (411)
T ss_pred eeccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHHHH
Confidence 9988754 34556889999999998753 34777899999999999999999998632 222333334
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+....... .....+......++|.+|++.||.+|.|++|+++|-
T Consensus 241 meGkyqF~-speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 241 MEGKYQFR-SPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HhcccccC-CcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 33333211 111223334577999999999999999999999884
No 79
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.7e-37 Score=323.02 Aligned_cols=256 Identities=26% Similarity=0.434 Sum_probs=205.6
Q ss_pred cCCccceeeecccceeEEEEEccC------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
++|++.+.||+|+||.||+|.... .+.||+|.+...... .....+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEP--KVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCH--HHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468889999999999999997532 267999998755432 234578999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcc-------------cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEA-------------VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
.+++|||+++|+|.+++.+.... ..+++..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 99999999999999999764221 3478889999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-------- 231 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-------- 231 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 99999999999986543221 1223346788999999988889999999999999999998 999987321
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.. .....+........ .......+.+++.+||+.||.+||+++||+++|+.
T Consensus 232 ~~-~~~~~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 232 NQ-EVIEMIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH-HHHHHHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 12222222222221 11223458899999999999999999999999975
No 80
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-37 Score=340.31 Aligned_cols=257 Identities=24% Similarity=0.308 Sum_probs=204.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+++.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++..+...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467999999999999999999754 689999999976443333334567889999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.+. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999998753 277888889999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccCccCccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 656 SDSS-NRTIVAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 656 ~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .......+......
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~~ 265 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMDHKNS 265 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcCCCc
Confidence 3322 22345699999999988643 47889999999999999999999987422 11222333322211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEF 769 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 769 (796)
..... .......+.+++.+|++.+|++ ||+++|+++|-
T Consensus 266 ~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 266 LTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 11111 1112235778999999999998 99999998874
No 81
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.7e-37 Score=327.30 Aligned_cols=258 Identities=27% Similarity=0.381 Sum_probs=194.8
Q ss_pred cCCccceeeecccceeEEEEEc-c-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc---CCCceeeEEeEEEe----
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-P-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI---AHRNIVKLYGFCLH---- 569 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~---- 569 (796)
++|++.+.||+|+||.||+|+. + +++.||+|++......+.. ...+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM-PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc-hHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 3689999999999999999975 3 4788999998765433221 23456677776665 69999999999852
Q ss_pred -cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 570 -KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 570 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456899999997 589988875432 3478999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh---
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL--- 725 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 725 (796)
|+++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.+..
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-----~~~~~i~~~~~~~ 228 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----DQLGKILDVIGLP 228 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-----HHHHHHHHHhCCC
Confidence 999876533 2233456899999999998888999999999999999999999998743211 0000000000
Q ss_pred ----------------cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 ----------------DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..................+.+++.+|++.||++|||+.|+++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000000001011122346799999999999999999999975
No 82
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=326.28 Aligned_cols=264 Identities=25% Similarity=0.332 Sum_probs=211.8
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+...+.+.||+|-||.|..+....+..||||+++....... .++|.+|+++|.+++||||++++|.|..++..++++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~--r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA--RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhH--HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 345567789999999999999998889999999998876543 479999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||++|+|.+++.++.... .+...-.+|+.|||.|++||.+. ++||||+.++|+|++.++++||+|||+++-+-..
T Consensus 615 EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999999998774322 45566678999999999999998 9999999999999999999999999999965433
Q ss_pred CCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 658 SSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 658 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
++. .....-+..|||||.+.-+++++++|||+||+++||+++ ...||....+ ..-.+......+..-....
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-----e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-----EQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-----HHHHHhhhhhcCCCCccee
Confidence 332 223345678999999999999999999999999999875 6788774322 1111122223332222222
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
...+.-...++.+++.+||..|-++||+++++..+|++.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 222223334577999999999999999999999998764
No 83
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.5e-37 Score=330.00 Aligned_cols=245 Identities=23% Similarity=0.335 Sum_probs=193.8
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.. +++.||+|+++..........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999754 5889999999865433333344556677777654 799999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999987643 388899999999999999999999 999999999999999999999999999986543333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... .... ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~--~~~~---~~~~ 221 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--------EDELFDSILNDRP--HFPR---WISK 221 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCC--CCCC---CCCH
Confidence 5679999999999999899999999999999999999999987321 1112222221111 1111 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCHH-HHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQ-RVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~-evl~~ 768 (796)
.+.+++.+||+.||++||++. +++++
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 467899999999999999875 55553
No 84
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.7e-37 Score=321.96 Aligned_cols=256 Identities=27% Similarity=0.469 Sum_probs=209.7
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
...+|++.+.||+|+||.||+|..++++.+|+|.+....... ...+..|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK---QQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhh---HHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 445788999999999999999998889999999987654422 35788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999998643 23478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.........++..|+|||...+..++.++||||||+++|+|++ |+.||.... ......... ........
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~~- 226 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQIT-AGYRMPCP- 226 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHH-hCCcCCCC-
Confidence 3332233346678999999988889999999999999999998 899986322 111222222 22222111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.||++|||++++++.|+.
T Consensus 227 --~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 227 --AKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1223457899999999999999999999999975
No 85
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.7e-37 Score=319.17 Aligned_cols=263 Identities=22% Similarity=0.303 Sum_probs=212.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|... +|+.||+|.++.....+....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999765 79999999987654443344568899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++|+|.+++.+.. ....+++..+..++.++++||+|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999987532 234578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.+.....++..
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-- 229 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-------NLYSLCKKIEKCDYPPLP-- 229 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-------cHHHHHhhhhcCCCCCCC--
Confidence 43333445688899999999888899999999999999999999999863211 111111111111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.......+.+++.+|++.+|++||++.+|++.+++..
T Consensus 230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1122345789999999999999999999999998753
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.2e-37 Score=332.83 Aligned_cols=243 Identities=24% Similarity=0.301 Sum_probs=192.6
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHH-HHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAH-VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||+||+|+.+ +|+.||+|++...........+.+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999764 79999999997654333222345555554 56789999999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99999987643 478889999999999999999999 999999999999999999999999999875433333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... ................ . ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~~-~----~~~~ 221 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------TAEMYDNILNKPLRLK-P----NISV 221 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--------HHHHHHHHHcCCCCCC-C----CCCH
Confidence 4569999999999999999999999999999999999999987321 1122222222222111 1 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVC 766 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl 766 (796)
.+.+++.+|++.||.+||++.+.+
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~ 245 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAKDDF 245 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCCCCH
Confidence 477899999999999999985333
No 87
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.3e-37 Score=339.03 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=198.7
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 588899999999999999964 4689999999976554444445678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987643 378888899999999999999999 99999999999999999999999999975431100
Q ss_pred -----------------------------------------------CCccccccccCccCccccccCCcCcchhHHHHH
Q 003780 659 -----------------------------------------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFG 691 (796)
Q Consensus 659 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlG 691 (796)
.......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 001124699999999999988899999999999
Q ss_pred HHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc--CCCCCccchhhHHHHHHHHHHHHH--cCCCCCCCCCCHHHHHH
Q 003780 692 VVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD--SRLSPPVDRMVMQDIVLVTTVALA--CLHSKPKFRPTMQRVCQ 767 (796)
Q Consensus 692 v~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl~ 767 (796)
|++|||++|+.||..... ......+.. .....+... ....++.+++.+ |+..+|..||+++|+++
T Consensus 236 ~il~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTP--------TETQLKVINWENTLHIPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCH--------HHHHHHHHccccccCCCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999999973221 111111221 111111100 112236677777 55666667999999998
Q ss_pred HH
Q 003780 768 EF 769 (796)
Q Consensus 768 ~L 769 (796)
|-
T Consensus 305 hp 306 (381)
T cd05626 305 HP 306 (381)
T ss_pred Cc
Confidence 74
No 88
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.9e-37 Score=330.92 Aligned_cols=250 Identities=21% Similarity=0.300 Sum_probs=200.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999755 6789999999865433333345667788888777 5899999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999887543 378899999999999999999999 9999999999999999999999999999764433
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--------~~~~~~~i~~~~~~~p~---- 222 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHNVAYPK---- 222 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCC----
Confidence 333445679999999999999999999999999999999999999997321 12222223332222111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTM-----QRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 768 (796)
.....+.+++.+|++.||++|++. .++.++
T Consensus 223 -~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 223 -SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 122347789999999999999985 555544
No 89
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.9e-37 Score=325.91 Aligned_cols=255 Identities=24% Similarity=0.271 Sum_probs=203.5
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|++.+.||+|+||+||++.. .+++.||+|++.............+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999975 4689999999976544333334567889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999998886542 23488999999999999999999999 99999999999999999999999999998754322
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...+..... .. ..
T Consensus 157 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~-~~---~~ 226 (285)
T cd05605 157 T-IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE-----KVKREEVERRVKEDQE-EY---SE 226 (285)
T ss_pred c-cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch-----hhHHHHHHHHhhhccc-cc---Cc
Confidence 2 2234689999999999988899999999999999999999999974221 1111112222221111 11 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.....+.+++.+|++.||++|| ++++++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 1233477999999999999999 88888776
No 90
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-37 Score=334.96 Aligned_cols=262 Identities=25% Similarity=0.328 Sum_probs=196.5
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----cee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----KCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 573 (796)
+|++.+.||+|+||.||+|.. .+|+.||||++....... .....+.+|++++++++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 588899999999999999975 478999999987543222 2235688999999999999999999988643 247
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+. ++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999996 68988887543 388999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC---CccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchhh
Q 003780 654 LDSDSS---NRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQK 718 (796)
Q Consensus 654 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~~ 718 (796)
...... ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.....
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 432211 1233568999999999865 578899999999999999999999986422100 0000000
Q ss_pred --------hHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 719 --------IMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 719 --------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+..................+.+++.+|++.||++|||++|++++-
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000011111111111110111223477999999999999999999999883
No 91
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.1e-37 Score=317.96 Aligned_cols=254 Identities=24% Similarity=0.416 Sum_probs=205.7
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|++|.||+|...+++.||+|.+...... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh----HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 4578999999999999999999888889999998754332 357899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999997643 23478889999999999999999998 9999999999999999999999999999876432
Q ss_pred CCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
... .....++..|+|||+..+..++.++|||||||++|+|++ |+.||.... ..... ..+......+...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--------~~~~~-~~~~~~~~~~~~~ 227 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--------NSDVM-SALQRGYRMPRME 227 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--------HHHHH-HHHHcCCCCCCCC
Confidence 211 122335678999999988889999999999999999998 999986321 11111 1111111111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 228 ---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 ---NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 122347899999999999999999999999875
No 92
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-37 Score=338.02 Aligned_cols=257 Identities=24% Similarity=0.316 Sum_probs=202.6
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+++.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++..++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4578999999999999999999765 688999999875443333334567899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999998753 278888999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccCccCccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 656 SDSS-NRTIVAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 656 ~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... .......+......
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~--------~~~~~~~i~~~~~~ 265 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS--------LVGTYSKIMDHKNS 265 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCcc
Confidence 3322 22345699999999998653 37789999999999999999999997322 12222333332211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEF 769 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 769 (796)
..... .......+.+++..|++.+|.+ ||+++|+++|-
T Consensus 266 ~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 266 LNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred cCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 11111 0111234668889999866654 89999999984
No 93
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-37 Score=331.60 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=198.3
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999765 5889999999765433333345677888888866 799999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99999887543 378899999999999999999999 999999999999999999999999999876443333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~--------~~~~~~~i~~~~~~~p~-----~~~~ 221 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN--------EDDLFESILHDDVLYPV-----WLSK 221 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCC-----CCCH
Confidence 4569999999999998899999999999999999999999997322 12222222222221111 1123
Q ss_pred HHHHHHHHcCCCCCCCCC-------CHHHHHHHH
Q 003780 743 LVTTVALACLHSKPKFRP-------TMQRVCQEF 769 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RP-------s~~evl~~L 769 (796)
.+.+++.+|++.||++|| ++++++++-
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 477899999999999999 788887663
No 94
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-37 Score=321.99 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=203.6
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|++.+.||+|+||.||+|..+ .++.||+|++...... ....++.+|+.+++.++||||+++++++..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4678999999999999999998643 3577999998654322 2245788999999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCc-------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcE
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYE-------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
...++||||+++|+|.+++++... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999875432 13367888999999999999999998 99999999999999999999
Q ss_pred EEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 644 FVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
+|+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |..||.... ....
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--------~~~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--------NEQV 230 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHH
Confidence 99999998765432211 112345778999999998889999999999999999999 688876321 1122
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.............. .....+.+++.+|++.||++|||+.|+++.+++
T Consensus 231 ~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 22222222211111 122357899999999999999999999999863
No 95
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=328.26 Aligned_cols=257 Identities=24% Similarity=0.326 Sum_probs=216.8
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 574 (796)
..+.|++.+.||.|.||.||+++.+ +|+.+|+|.+.+...........+.+|+++|+++. |||||.+.+.++.....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3567888899999999999999766 49999999998877655444568999999999998 999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC----CcEEEeeecc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGT 650 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~ 650 (796)
+|||++.||.|.+.+... .+++..+..++.|++.++.|||+. ||+|||+||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999866 289999999999999999999998 99999999999999643 4799999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
+..... .......+||+.|+|||++.+..|+..+||||+||++|.|++|..||.... .......+......
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~--------~~~~~~~i~~~~~~ 256 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET--------EFEIFLAILRGDFD 256 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC--------hhHHHHHHHcCCCC
Confidence 998876 555667889999999999999999999999999999999999999998432 22233344444332
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..... .........+++..|+..||.+|+|++++++|.+
T Consensus 257 f~~~~-w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 257 FTSEP-WDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred CCCCC-ccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 21111 1222345778999999999999999999999854
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.4e-37 Score=329.19 Aligned_cols=245 Identities=22% Similarity=0.310 Sum_probs=193.5
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +|+.||+|.+...........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999765 6899999999765432222244567788887754 899999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99999987643 378899999999999999999999 999999999999999999999999999875433333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.... +.... ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--------~~~~~~~~~~~~--~~~~~---~~~~ 221 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--------EDELFESIRVDT--PHYPR---WITK 221 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC--CCCCC---CCCH
Confidence 5679999999999999999999999999999999999999987321 111111111111 11111 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCHH-HHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQ-RVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~-evl~~ 768 (796)
.+.+++.+|++.||++||++. ++.+|
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 467899999999999999984 66544
No 97
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.2e-37 Score=340.21 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=199.8
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688999999999999999965 478999999987654433344567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999997543 378888999999999999999999 9999999999999999999999999998633210
Q ss_pred CC-----------------------------------------------CccccccccCccCccccccCCcCcchhHHHH
Q 003780 658 SS-----------------------------------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSF 690 (796)
Q Consensus 658 ~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSl 690 (796)
.. ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012458999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHH
Q 003780 691 GVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFR---PTMQRVCQ 767 (796)
Q Consensus 691 Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 767 (796)
||++|||++|+.||..... ......+........... .......+.+++.+|++ +|.+| +++.|+++
T Consensus 235 Gvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS--------HETYRKIINWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred chhhhhhhcCCCCCCCCCH--------HHHHHHHHccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 9999999999999973221 111222221111111110 00112347789999998 66665 69999998
Q ss_pred HH
Q 003780 768 EF 769 (796)
Q Consensus 768 ~L 769 (796)
+-
T Consensus 305 hp 306 (377)
T cd05629 305 HP 306 (377)
T ss_pred CC
Confidence 84
No 98
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.5e-36 Score=316.38 Aligned_cols=254 Identities=25% Similarity=0.428 Sum_probs=206.2
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|++|.||+|...+++.||+|.++..... .+++.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 4678999999999999999998877889999998765432 357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999997653 23478999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCc-cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNR-TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.... .....+..|+|||++.+..++.++||||||+++|||++ |+.||.... ... ....+.........
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~-~~~~~~~~~~~~~~- 226 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--------NAE-VLQQVDQGYRMPCP- 226 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--------HHH-HHHHHHcCCCCCCC-
Confidence 2211 11123457999999998889999999999999999999 999986321 111 11222222211111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++||++.++.+.|++
T Consensus 227 --~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 --PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1223458899999999999999999999999975
No 99
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-36 Score=334.05 Aligned_cols=257 Identities=24% Similarity=0.274 Sum_probs=197.0
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|++.+.||+|+||.||+|.. .+++.||+|.... +.+.+|++++++++||||+++++++..+...++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 35799999999999999999965 5789999996431 3467899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+|++. ++|..++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 162 ~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred EecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 99986 68888886543 378999999999999999999999 999999999999999999999999999975432
Q ss_pred CC-CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC--Cchhh---------------
Q 003780 657 DS-SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP--SSDQK--------------- 718 (796)
Q Consensus 657 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~--~~~~~--------------- 718 (796)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.|+......... .....
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 21 2223356999999999999989999999999999999999999886432211100 00000
Q ss_pred ----hHHHH----hhcCCC-CCc---cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 719 ----IMLID----VLDSRL-SPP---VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 719 ----~~~~~----~~~~~~-~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..... ...... .+. ...........+.+++.+||+.||++|||++|++++-.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 00000 000000 000 00001122346889999999999999999999998743
No 100
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=317.44 Aligned_cols=268 Identities=25% Similarity=0.408 Sum_probs=205.8
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc--CCCceeeEEeEEEecc----e
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI--AHRNIVKLYGFCLHKK----C 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~~----~ 572 (796)
...+..+.||+|.||.||||++. ++.||||++.... .+.|.+|.++.+.. +|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 34556778999999999999986 5999999996443 45788888888764 7999999999887655 8
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC------CCCeEEecCCCCCeEecCCCcEEEe
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC------MPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
++||+||.+.|+|.++|+.+ .++|....+|+..+++||+|||+.. .|+|+|||||++|||+..|++..|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 99999999999999999875 3899999999999999999999863 4689999999999999999999999
Q ss_pred eeccccccCCCCCC--ccccccccCccCccccccCC-cC-----cchhHHHHHHHHHHHHhCCCCCcc--cccCCC----
Q 003780 647 DFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMV-VT-----EKCDVYSFGVVALEVLMGRHPGEL--LSSLSS---- 712 (796)
Q Consensus 647 Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~-----~~~DVwSlGv~l~elltg~~p~~~--~~~~~~---- 712 (796)
|||+|..+...... ....+||.+|||||++.+.. .. .+.||||+|.|+|||+++-.-++. ......
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999887654322 12256999999999987643 11 368999999999999986544321 111000
Q ss_pred ---CCchhhhHHHHhhcCCCCCccchhh--HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcccc
Q 003780 713 ---PSSDQKIMLIDVLDSRLSPPVDRMV--MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALV 777 (796)
Q Consensus 713 ---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 777 (796)
....-..+...++.++.+|...+.. ...+..+.+.+..||+.||+.|-|+.=|.+.+.++.....
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0011122233344444444433321 2445678999999999999999999999999887765543
No 101
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.8e-37 Score=318.85 Aligned_cols=262 Identities=19% Similarity=0.283 Sum_probs=210.9
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+++. .+++.+|||.+......+....+++.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999974 579999999887655444444568899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999887432 234588999999999999999999999 999999999999999999999999999887654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........++..|+|||+..+..++.++||||||+++|+|++|..||..... ...............+...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~-- 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCDYPPLPS-- 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc------hHHHHhhhhhcCCCCCCCc--
Confidence 43333345688999999999888899999999999999999999999863211 0111111111111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
......+.+++.+|++.||++||||.+|++.+++.
T Consensus 231 -~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 231 -DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred -ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 12234588999999999999999999999998875
No 102
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1e-36 Score=321.02 Aligned_cols=256 Identities=26% Similarity=0.423 Sum_probs=205.4
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|.+.+.||+|+||.||+|... +++.||+|.+......+ ..+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASND--ARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHH--HHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 356888899999999999999753 35789999987654432 2468999999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc-----------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE-----------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
..++||||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC
Confidence 99999999999999999976421 24478889999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchh
Q 003780 641 LEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~ 717 (796)
+.++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--------~ 230 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--------N 230 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--------H
Confidence 9999999999976533221 1223346788999999999999999999999999999998 999986321 1
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
................. .....+.+++.+||+.||++||++.|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 231 EEVIECITQGRLLQRPR----TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11222222222211111 12335789999999999999999999999886
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=343.38 Aligned_cols=251 Identities=23% Similarity=0.247 Sum_probs=202.1
Q ss_pred CCccceeeecccceeEEEEEcc-C-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-N-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.|.+.+.||+|++|.||+|... + ++.||+|.+..... .....+.+|+.+++.++||||+++++++..++..++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE---RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4889999999999999999643 4 67888887754432 22346788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++|+|.++++.. .....+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999988653 2234578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..............+...
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~--------~~~~~~~~~~~~~~~~~~ 293 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS--------QREIMQQVLYGKYDPFPC 293 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCCc
Confidence 321 1334569999999999999899999999999999999999999986321 122222222222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+||+.||++||++++++.+
T Consensus 294 ----~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 294 ----PVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ----cCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 122347889999999999999999999765
No 104
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-36 Score=315.84 Aligned_cols=251 Identities=25% Similarity=0.421 Sum_probs=202.8
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
++|++.+.||+|+||+||+|+..++..+|+|.+...... .+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 468888999999999999998877778999998755432 3468899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++..... .+++..++.++.||+.||+|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999999976432 489999999999999999999999 99999999999999999999999999988654332
Q ss_pred CCc-cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 659 SNR-TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 659 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
... ....++..|+|||+..+..++.++|||||||++|+|++ |+.||.... ........... .......
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~-~~~~~~~- 224 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--------NSETVEKVSQG-LRLYRPH- 224 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHhcC-CCCCCCC-
Confidence 211 12235677999999988889999999999999999998 999986322 11112222221 1111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.+++.+||+.+|++||++.++++.++
T Consensus 225 --~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 --LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 12345789999999999999999999998874
No 105
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4e-37 Score=331.17 Aligned_cols=250 Identities=23% Similarity=0.268 Sum_probs=195.6
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHH-HHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAH-VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++.............+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999765 67889999997654332222334444444 56788999999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.... .+.+..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999987643 377888888999999999999999 999999999999999999999999999976443333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... ................ .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~~~-----~~~~~ 221 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKPLQLK-----PNITN 221 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCCcCCC-----CCCCH
Confidence 5679999999999999999999999999999999999999987321 1122222222222111 11123
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.+.+++.+|++.||.+||++.+.+.++.+..
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 4778999999999999999886665555544
No 106
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-36 Score=334.38 Aligned_cols=261 Identities=22% Similarity=0.347 Sum_probs=205.4
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~ 569 (796)
..++|.+.+.||+|+||.||+|... .+..||||++...... ...+.+.+|+++++++. ||||+++++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS--SEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3568999999999999999999642 2457999999765432 22457899999999996 9999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCc-------------------------------------------------------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------- 594 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 594 (796)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999998865311
Q ss_pred --------------------------------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 003780 595 --------------------------------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNIL 636 (796)
Q Consensus 595 --------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIl 636 (796)
...+++..+.+++.|+++||+|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 12367888899999999999999998 9999999999999
Q ss_pred ecCCCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCC
Q 003780 637 LNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSP 713 (796)
Q Consensus 637 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~ 713 (796)
++.++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~---- 345 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV---- 345 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch----
Confidence 99999999999999986543221 1222346788999999998889999999999999999997 9999863211
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.......+.......... .....+.+++.+||+.||++||++.+|.+.|++..
T Consensus 346 ----~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 346 ----DSTFYNKIKSGYRMAKPD---HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ----hHHHHHHHhcCCCCCCCc---cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111111222222111111 12335789999999999999999999999998754
No 107
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.9e-37 Score=332.21 Aligned_cols=249 Identities=24% Similarity=0.286 Sum_probs=196.2
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHH-HHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAH-VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+. .+|+.||+|++...........+.+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3689999999999975 478999999997654333233345555655 46778999999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99998887543 488999999999999999999999 999999999999999999999999999875433333344
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... ................. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~~~~~~~~~~~-----~~~~ 221 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--------VAEMYDNILHKPLVLRP-----GASL 221 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--------HHHHHHHHHcCCccCCC-----CCCH
Confidence 5679999999999999999999999999999999999999987321 11222222222221111 1223
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.+++.+|++.+|.+||++.+.++++..+
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 467899999999999999987555555444
No 108
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.3e-37 Score=328.48 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=198.3
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||+||+|+.+ +++.||+|++...........+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 5889999999865433333345677888988887 699999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99999887653 389999999999999999999999 999999999999999999999999999875433333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...|++.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.......+ .....
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~--------~~~~~~~i~~~~~~~~-----~~~~~ 221 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD--------EDELFQSILEDEVRYP-----RWLSK 221 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC--------HHHHHHHHHcCCCCCC-----CcCCH
Confidence 4568999999999999999999999999999999999999987322 1112222222222111 11123
Q ss_pred HHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTM-----QRVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~-----~evl~~ 768 (796)
.+.+++.+||+.||++||++ .+++++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 47799999999999999999 888776
No 109
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.9e-37 Score=327.12 Aligned_cols=245 Identities=23% Similarity=0.328 Sum_probs=193.1
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999765 5789999999865432222234566778887764 899999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99999987543 378899999999999999999999 999999999999999999999999999875433223334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+..... .... ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~~~--~~~~---~~~~ 221 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--------EEELFQSIRMDNP--CYPR---WLTR 221 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC--CCCc---cCCH
Confidence 4568999999999998899999999999999999999999987321 1111111111111 1111 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCHH-HHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQ-RVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~-evl~~ 768 (796)
.+.+++.+|++.||++||++. ++.++
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 467899999999999999997 66553
No 110
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-36 Score=326.72 Aligned_cols=262 Identities=23% Similarity=0.308 Sum_probs=202.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||++..+ +++.+|+|.+...... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 468999999999999999999765 6889999988765322 2245789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.|++.||.|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999997643 3788899999999999999999742 799999999999999999999999999976533
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC----------CCc-----------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS----------PSS----------- 715 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~----------~~~----------- 715 (796)
. ......|+..|+|||++.+..++.++|||||||++|+|++|+.||........ ...
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 2 12234689999999999988899999999999999999999999863211000 000
Q ss_pred --------------hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 716 --------------DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 716 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.........+.....+.... .....++.+++.+||+.||++|||++|++++-.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS--GVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCC--CCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 00000000000000000000 011234789999999999999999999998843
No 111
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-36 Score=314.33 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=206.9
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||+|..+ +++.|++|.+....... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR-REREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH-HHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4778899999999999999754 68999999987554332 234678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.++++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999998652 24588999999999999999999998 99999999999999999999999999998765543
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......|++.|+|||+..+..++.++|||||||++|+|++|+.||.... .............. ....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~-~~~~--- 223 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILKIIRGVFP-PVSQ--- 223 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCC-CCcc---
Confidence 33344568899999999998889999999999999999999999987322 12222222222221 1111
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 223357899999999999999999999876
No 112
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.9e-37 Score=319.59 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=202.0
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++..++..++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~---~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD---FSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccch---HHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 35799999999999999999975 578999999987543322 34678899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+++++|.+++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999987543 378999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
.........|++.|+|||.+. ...++.++||||+||++|||++|+.||...... ............+..
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 230 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM--------RALFLMSKSNFQPPK 230 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--------hhheeeecCCCCCCC
Confidence 333233456888999999874 345778999999999999999999998633211 001111111111111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..........+.+++.+||+.+|++||+++++++++
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000111234578999999999999999999999875
No 113
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.5e-37 Score=329.58 Aligned_cols=240 Identities=25% Similarity=0.331 Sum_probs=190.8
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHH-HHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAH-VLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +|+.||+|++...........+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 68999999997654333333345555554 67889999999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99998887543 378888899999999999999998 999999999999999999999999999875433333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+.......+ .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~~~-----~~~~~ 221 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------VSQMYDNILHKPLQLP-----GGKTV 221 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--------HHHHHHHHhcCCCCCC-----CCCCH
Confidence 4568999999999998889999999999999999999999987321 1122222222222111 11223
Q ss_pred HHHHHHHHcCCCCCCCCCCHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQ 763 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~ 763 (796)
.+.+++.+|++.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 477899999999999999765
No 114
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-37 Score=309.50 Aligned_cols=255 Identities=23% Similarity=0.292 Sum_probs=216.8
Q ss_pred cCCccceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||.|.-|+||.++.++ +..+|+|++.+..........+...|.+||+.++||.+..+++.++.++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 457778899999999999998764 5899999999888776666778899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC-
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS- 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 656 (796)
|||+||+|..+.+++.. ..+++..+..++..|+-||+|||.. |||.|||||+|||+.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999987644 5589999999999999999999999 999999999999999999999999999754311
Q ss_pred --------------------------------CCCC-----------------------ccccccccCccCccccccCCc
Q 003780 657 --------------------------------DSSN-----------------------RTIVAGTYGYIAPELAYTMVV 681 (796)
Q Consensus 657 --------------------------------~~~~-----------------------~~~~~gt~~y~aPE~~~~~~~ 681 (796)
.... ....+||-.|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0000 011458999999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC
Q 003780 682 TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT 761 (796)
Q Consensus 682 ~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 761 (796)
+.++|+|+|||++|||+.|.-||.. ......+..++...+..+... .......+||++.|.+||.+|-.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG--------~~~~~Tl~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKG--------SNNKETLRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCC--------CCchhhHHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhhhc
Confidence 9999999999999999999999973 445667777877776654433 33345789999999999999998
Q ss_pred ----HHHHHHH
Q 003780 762 ----MQRVCQE 768 (796)
Q Consensus 762 ----~~evl~~ 768 (796)
+.||-+|
T Consensus 382 ~~rGA~eIK~H 392 (459)
T KOG0610|consen 382 SKRGAAEIKRH 392 (459)
T ss_pred cccchHHhhcC
Confidence 7777666
No 115
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.4e-37 Score=344.14 Aligned_cols=256 Identities=24% Similarity=0.276 Sum_probs=204.9
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK---- 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 571 (796)
..++|.+.+.||+|+||+||+|+. .+|+.||||++........ ....+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEA-DKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHH-HHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 457999999999999999999964 5799999999976544332 2457889999999999999999988775432
Q ss_pred ----eeeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 572 ----CMFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 572 ----~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999987542 234588999999999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCC--CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 647 DFGTARLLDSDS--SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 647 Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~--------~~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN--------MEEVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHH
Confidence 999998764321 12234569999999999999999999999999999999999999987321 11222222
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.. ......+.+++.+||+.||++||++.+++++
T Consensus 258 ~~~~~~~~~----~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRYDPLP----PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCCCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222221111 1122347899999999999999999999876
No 116
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5e-37 Score=338.09 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=197.2
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999975 4688999999976544334445678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987643 378888899999999999999999 99999999999999999999999999975321000
Q ss_pred -----------------------------------------------CCccccccccCccCccccccCCcCcchhHHHHH
Q 003780 659 -----------------------------------------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFG 691 (796)
Q Consensus 659 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlG 691 (796)
.......||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999998999999999999
Q ss_pred HHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc--CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHH
Q 003780 692 VVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD--SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVC 766 (796)
Q Consensus 692 v~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 766 (796)
|++|||++|+.||..... ......+.. .....+... .......+++.+|+ .+|++|++ +.|++
T Consensus 236 vil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~p~~~---~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 236 VILYEMLVGQPPFLAQTP--------LETQMKVINWQTSLHIPPQA---KLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHHHHhCCCCCCCCCH--------HHHHHHHHccCCCcCCCCcc---cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 999999999999973221 111112221 111111111 11223567777776 49999987 88888
Q ss_pred HH
Q 003780 767 QE 768 (796)
Q Consensus 767 ~~ 768 (796)
+|
T Consensus 304 ~h 305 (382)
T cd05625 304 AH 305 (382)
T ss_pred cC
Confidence 76
No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.3e-37 Score=334.00 Aligned_cols=255 Identities=24% Similarity=0.320 Sum_probs=203.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+++.+ +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999754 78999999998765433344567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999997652 2488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ccccccccCccCccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 658 SSN-RTIVAGTYGYIAPELAY------TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~------~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+......
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~ 227 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS--------AKTYNNIMNFQRF 227 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--------HHHHHHHHcCCCc
Confidence 222 23346899999999986 45677899999999999999999999873211 1122222221111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..... .......+.+++..|++ +|.+||+++++++|
T Consensus 228 ~~~~~-~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 228 LKFPE-DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred cCCCC-CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 01110 01122347789999998 99999999999876
No 118
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.8e-36 Score=315.22 Aligned_cols=255 Identities=29% Similarity=0.426 Sum_probs=204.4
Q ss_pred cCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||+||+|..+ +...||+|.+....... ....+.+|+.++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK--QRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChH--HHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 57889999999999999999764 24579999887654332 2457889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++++|.+++..... .+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++|+|||++...
T Consensus 82 iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999999976432 588999999999999999999998 9999999999999999999999999999877
Q ss_pred CCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 655 DSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 655 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
...... .....++..|+|||...+..++.++||||||+++|+|++ |..||.... ..............+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--------NQDVIKAVEDGYRLP 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--------HHHHHHHHHcCCCCC
Confidence 522211 112234678999999998889999999999999999998 999985321 111112221111111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.. ......+.+++.+|++.+|++||++.|++++|++.
T Consensus 229 ~~----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 PP----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 12234578999999999999999999999999764
No 119
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.9e-37 Score=329.70 Aligned_cols=255 Identities=25% Similarity=0.316 Sum_probs=199.6
Q ss_pred CCccceeeecccceeEEEEEc----cCCcEEEEEEeccccch-hhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEeccee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETE-ETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 573 (796)
+|++.+.||+|+||.||+++. .+++.||+|++...... .....+.+..|+.++++++ ||||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999864 35889999999764322 1223456788999999995 99999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987543 388999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 654 LDSDSS-NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 654 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .............. +
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~~~~~--~ 228 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRILKCD--P 228 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHHhcCC--C
Confidence 543322 22345699999999998765 4788999999999999999999999633211 11111111111111 1
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
.... .....+.+++.+|++.||++|| ++++++++-
T Consensus 229 ~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 229 PFPS---FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 1111 1123467899999999999999 777888763
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-36 Score=315.58 Aligned_cols=254 Identities=27% Similarity=0.418 Sum_probs=204.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+|++.+.||+|++|.||+|..+ .++.||+|.+...... .+++.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchH----HHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 45888899999999999999754 5889999998754322 357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+......
T Consensus 82 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999987543 23478999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCCc-cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNR-TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.... .......+..........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~ 228 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID---------LSQVYELLEKGYRMERPE 228 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC---------HHHHHHHHHCCCCCCCCC
Confidence 2211 11224568999999998899999999999999999998 889976321 111122222222222111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.....+.+++.+|++.||++||++.++++.|+..
T Consensus 229 ---~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 229 ---GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1234588999999999999999999999999764
No 121
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=9.1e-37 Score=329.38 Aligned_cols=259 Identities=25% Similarity=0.387 Sum_probs=202.9
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 570 (796)
.++|++.+.||+|+||.||+|... +++.||+|++...... ...+.+..|+.++.++ +||||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA--SEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH--HHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 457999999999999999999532 3578999999755432 2245778899999999 799999999988754
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCc-------------------------------------------------------
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------- 594 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 594 (796)
...++++||+++|+|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 567899999999999999864321
Q ss_pred ---ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccC
Q 003780 595 ---AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYG 669 (796)
Q Consensus 595 ---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~ 669 (796)
...+++..+.+++.||+.||+|||+. +|+||||||+||+++.++.++|+|||+++.+...... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12578999999999999999999999 9999999999999999999999999999876433221 222345678
Q ss_pred ccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHH
Q 003780 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVA 748 (796)
Q Consensus 670 y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 748 (796)
|+|||++.+..++.++|||||||++|||++ |..||..... .......+.......... .....+.+++
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 309 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI--------DEEFCRRLKEGTRMRAPE---YATPEIYSIM 309 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc--------cHHHHHHHhccCCCCCCc---cCCHHHHHHH
Confidence 999999999999999999999999999998 9999863211 011112222221111111 1223578999
Q ss_pred HHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 749 LACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 749 ~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+|++.+|++||++.|++++|++.
T Consensus 310 ~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 310 LDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999864
No 122
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-36 Score=326.77 Aligned_cols=252 Identities=22% Similarity=0.341 Sum_probs=198.9
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999754 6889999999876554444456788999999888 599999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|..++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99998887543 389999999999999999999999 999999999999999999999999999975433333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ................+ . ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~p--~---~~~~ 228 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKPIRIP--R---FLSV 228 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCCCCCC--C---CCCH
Confidence 5679999999999999999999999999999999999999996432211111 11111112222211111 1 1123
Q ss_pred HHHHHHHHcCCCCCCCCCCH------HHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTM------QRVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~------~evl~~ 768 (796)
.+.+++.+||+.||++||++ .++.+|
T Consensus 229 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 46789999999999999985 566655
No 123
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.4e-37 Score=338.79 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=197.7
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 689999999999999999975 4689999999976543333334678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997643 378888899999999999999999 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CCccccccccCccCccccccCCcCcchhHHHHHHHHH
Q 003780 659 -------------------------------------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVAL 695 (796)
Q Consensus 659 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ 695 (796)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0011246999999999999999999999999999999
Q ss_pred HHHhCCCCCcccccCCCCCchhhhHHHHhhcC--CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHH
Q 003780 696 EVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS--RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRP---TMQRVCQE 768 (796)
Q Consensus 696 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~ 768 (796)
||++|+.||..... ......+... ....+.. ......+.+++.+|+ .+|.+|+ ++.|+++|
T Consensus 236 ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~~---~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTP--------AETQLKVINWETTLHIPSQ---AKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCH--------HHHHHHHhccCccccCCCC---CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999974221 1111111111 1111110 011223567777776 5999999 89999988
No 124
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=312.45 Aligned_cols=252 Identities=26% Similarity=0.346 Sum_probs=193.9
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----ee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-----CM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 573 (796)
.|...+++|.|+||.||+|... +++.||||++..+.... .+|+++|+.++|||||++.-+|.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4667899999999999999754 57999999998766432 45899999999999999999886532 34
Q ss_pred eEEEeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeeccc
Q 003780 574 FLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFGTA 651 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a 651 (796)
.+|||||+. +|.+.++.. .....++...+.-+..||.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 589999987 898888742 1223477777888999999999999998 99999999999999987 88999999999
Q ss_pred cccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh-----
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL----- 725 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 725 (796)
+.+.....+ ..+.+|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|...+.. .+-..+.+++
T Consensus 174 K~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-----dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 174 KVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-----DQLVEIIKVLGTPTR 247 (364)
T ss_pred eeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-----HHHHHHHHHhCCCCH
Confidence 988766555 445678889999988765 6999999999999999999999888743221 1111111110
Q ss_pred --------------cCCCCCc-cch-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 --------------DSRLSPP-VDR-MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 --------------~~~~~~~-~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+.+... ... .......+..+++.++++.+|.+|.++.|++.|
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0111110 000 111223457899999999999999999999987
No 125
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-36 Score=318.44 Aligned_cols=256 Identities=23% Similarity=0.399 Sum_probs=203.3
Q ss_pred cCCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
++|++.+.||+|+||.||+|.. .+++.||+|.+...... .....+.+|++++++++||||+++++++..+...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP--QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4688889999999999999963 35688999999754332 2246788999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCc--------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 574 FLIYKYMKRGSLFCFLRNDYE--------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
++||||+++++|.+++..... ...+++.....++.|++.||+|||+. +++||||||+||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 999999999999999864321 23478889999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-------- 231 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-------- 231 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 99999999999986543221 1222345678999999988889999999999999999998 888986321
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.....+.+......... ......+.+++.+|++.||++||++.++.++|+.
T Consensus 232 -~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 232 -NQEVIEMVRKRQLLPCS---EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11222222222211111 1122347889999999999999999999999864
No 126
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-37 Score=330.63 Aligned_cols=240 Identities=25% Similarity=0.324 Sum_probs=194.4
Q ss_pred eeeecccceeEEEEEc----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 505 YCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.||+|+||.||+++. .+|+.||+|++........ ....+..|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVR-DRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhh-hHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999864 3689999999976543322 2346778999999999999999999999999999999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 660 (796)
++|+|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 9999999987543 489999999999999999999999 9999999999999999999999999999865444333
Q ss_pred ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHH
Q 003780 661 RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQD 740 (796)
Q Consensus 661 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (796)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||.... .......+.......+ ...
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--------~~~~~~~i~~~~~~~p-----~~~ 221 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD--------RKETMTMILKAKLGMP-----QFL 221 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC--------HHHHHHHHHcCCCCCC-----CCC
Confidence 344568999999999998888999999999999999999999987321 1222222222222111 111
Q ss_pred HHHHHHHHHHcCCCCCCCCCCHHH
Q 003780 741 IVLVTTVALACLHSKPKFRPTMQR 764 (796)
Q Consensus 741 ~~~l~~li~~cl~~dP~~RPs~~e 764 (796)
...+.+++.+||+.||++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 234678999999999999999554
No 127
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-36 Score=326.39 Aligned_cols=245 Identities=20% Similarity=0.306 Sum_probs=197.0
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~ 577 (796)
+|+..+.||+|+||.||+|+.+ +|+.||+|++...........+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999754 68999999998654333333456778888888886 578889999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999987543 388999999999999999999999 9999999999999999999999999998764433
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~~~~~~p~---- 222 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED--------EDELFQSIMEHNVSYPK---- 222 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCc----
Confidence 333344569999999999998889999999999999999999999987321 12222233322222111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQ 763 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~ 763 (796)
.....+.+++.+|++.+|.+|++..
T Consensus 223 -~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 223 -SLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred -cCCHHHHHHHHHHcccCHhhCCCCC
Confidence 1123467899999999999999853
No 128
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.9e-37 Score=333.24 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=203.9
Q ss_pred HHHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 492 EDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 492 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
.++....++|++.+.||+|+||.||+++.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++..+
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344445689999999999999999999765 6889999998754433333345678899999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
+..++||||+++|+|.+++... .++...+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999998753 278888899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CccccccccCccCccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 651 ARLLDSDSS-NRTIVAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 651 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--------HHHHHHHH
Confidence 987653322 22345699999999998653 378899999999999999999999973221 11222222
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEF 769 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 769 (796)
.......... .......+.+++.+|++.+|.+ ||+++|++++.
T Consensus 261 ~~~~~~~~~~-~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 261 NHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCCCcccCCC-cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 2111111110 0112234678999999854443 78999999885
No 129
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.5e-36 Score=348.34 Aligned_cols=261 Identities=26% Similarity=0.411 Sum_probs=203.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999754 68999999997654444444567999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCc--------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 578 KYMKRGSLFCFLRNDYE--------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
||+++|+|.+++..... ....++..+.+++.||++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999875311 12356778899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCC------------------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC
Q 003780 650 TARLLDSDS------------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS 711 (796)
Q Consensus 650 ~a~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~ 711 (796)
+++...... .......||+.|+|||++.+..++.++||||+||++|||+||+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 998652110 011124689999999999999999999999999999999999999874211
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhhc
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRP-TMQRVCQEFLTC 772 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~ 772 (796)
........+..... ... .......+.+++.+|++.||++|| +++++.+.|+..
T Consensus 237 -----~ki~~~~~i~~P~~--~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 237 -----RKISYRDVILSPIE--VAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred -----hhhhhhhhccChhh--ccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01111111111000 000 011223477899999999999995 667777777654
No 130
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3e-36 Score=319.34 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=207.2
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.+|.+.+.||+|+||.||+|+.. ++..+++|.+...... ..+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH---HHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45888899999999999999632 3567899988655432 23578899999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
.++||||+++++|.+++..... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999975431 23478999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.++|+|||++........ ......++..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------- 231 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------- 231 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------
Confidence 99999999999976543221 1223446788999999998899999999999999999999 9999863211
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
.. ..+.+......... ......+.+++.+|++.||++||++++|++.|++.....
T Consensus 232 -~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 232 -TE-VIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred -HH-HHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11 11112222111111 112335789999999999999999999999999886643
No 131
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.3e-36 Score=324.09 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=201.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.+|+..+.||+|+||.||+|.+. +++ .||+|++...... ...+++.+|+.+++.++||||+++++++... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46899999999999999999753 343 4899998754322 2346788999999999999999999999764 56
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 79999999999999998643 2478889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||+.... ......+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~---------~~~~~~~~~~~~ 229 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA---------SEISSILEKGER 229 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHHHhCCCC
Confidence 65432221 11234668999999999999999999999999999998 9999873211 111222222221
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
..... .....+.+++.+|++.+|.+||++.+++.++.....
T Consensus 230 ~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 230 LPQPP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 11111 122347789999999999999999999999876543
No 132
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.6e-36 Score=313.60 Aligned_cols=249 Identities=27% Similarity=0.454 Sum_probs=200.7
Q ss_pred CCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
+|++.+.||+|+||.||+|..++++.+|+|.+...... ...+.+|++++++++||||+++++++...+..++|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 57888999999999999998887889999998654332 24678899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 81 MANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999976432 488999999999999999999999 999999999999999999999999999976543211
Q ss_pred C-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 660 N-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 660 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
. .....++..|+|||...+..++.++||||||+++|+|++ |+.||..... . .....+..........
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~-~~~~~~~~~~~~~~~~-- 224 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--------S-EVVESVSAGYRLYRPK-- 224 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--------H-HHHHHHHcCCcCCCCC--
Confidence 1 111223457999999998889999999999999999999 8999863211 1 1111122222111111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++|||+.|+++.|
T Consensus 225 -~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 225 -LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1234588999999999999999999999986
No 133
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.7e-36 Score=318.16 Aligned_cols=259 Identities=27% Similarity=0.435 Sum_probs=206.0
Q ss_pred cCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
++|.+.+.||+|+||.||++.. .++..+|+|.+...... ..+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN---ARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHH---HHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 5688899999999999999964 23566899988754322 24578999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcC----------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY----------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
.++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999997543 123489999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhh
Q 003780 643 AFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (796)
++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||.... ...
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--------~~~ 230 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNE 230 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHH
Confidence 99999999986543221 1122335778999999998889999999999999999998 899986321 111
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
....+....... ... .....+.+++.+|++.||.+|||+.|+.+.|+.....
T Consensus 231 ~~~~i~~~~~~~-~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 231 VIECITQGRVLQ-RPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHcCCcCC-CCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 222222222111 111 1223488999999999999999999999999887643
No 134
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.4e-36 Score=313.45 Aligned_cols=254 Identities=25% Similarity=0.429 Sum_probs=205.0
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..++++.||+|.+...... .+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 34678999999999999999999888999999998765543 347889999999999999999999874 5678999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 79 TEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999876432 3588999999999999999999998 999999999999999999999999999976653
Q ss_pred CCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .. ....+......+..
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~-~~~~~~~~~~~~~~ 225 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--------PE-VIQNLERGYRMPRP 225 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--------HH-HHHHHHcCCCCCCC
Confidence 221 1222345678999999988889999999999999999999 9999863221 11 11112222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
. .....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 226 ~---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 D---NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred C---CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1 122358899999999999999999999999875
No 135
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.3e-36 Score=319.21 Aligned_cols=264 Identities=22% Similarity=0.270 Sum_probs=199.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||+|..+ +++.||+|++....... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4788899999999999999764 68999999987543322 224578889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|++ ++|.+++........+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 998 58888887654445689999999999999999999999 99999999999999999999999999998654433
Q ss_pred CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCC------chhhhHH
Q 003780 659 SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPS------SDQKIML 721 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~------~~~~~~~ 721 (796)
.......+++.|+|||.+.+. .++.++|||||||++|+|+||+.||....... ... .......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 333334578899999987654 47889999999999999999999987422100 000 0000000
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....................++.+++.+|++.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000000000000001112346789999999999999999999875
No 136
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.3e-36 Score=316.36 Aligned_cols=255 Identities=29% Similarity=0.477 Sum_probs=204.5
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|++.+.||+|+||+||+++.+ +++.||+|++......... .....+|+.++++++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 677899999999999999765 5778999999888665433 23445699999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++++|.+++... ..+++..+..++.|+++||++||+. +|+|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999833 3489999999999999999999999 999999999999999999999999999976533333
Q ss_pred CccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 660 NRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
......++..|+|||++. +..++.++||||+|+++|+|++|..||.... ...................... ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~ 227 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN-----SDDQLEIIEKILKRPLPSSSQQ-SR 227 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS-----HHHHHHHHHHHHHTHHHHHTTS-HT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-----chhhhhhhhhcccccccccccc-cc
Confidence 444566899999999998 8889999999999999999999999987431 1112222222222111111100 01
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+||+.||++||++.+++++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112568899999999999999999999875
No 137
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.4e-36 Score=311.44 Aligned_cols=254 Identities=23% Similarity=0.352 Sum_probs=204.6
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh--hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE--TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
++|++.+.||+|++|.||+|.. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999975 468999999987554322 2234578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+||+++++|.+++.... .+++..+.+++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987643 378888999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCc---cccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 656 SDSSNR---TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 656 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||.... ................
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~ 227 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE--------AMAAIFKIATQPTNPQ 227 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc--------hHHHHHHHhccCCCCC
Confidence 322111 23457889999999999889999999999999999999999986321 1111222222222222
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... .....+.+++.+|++.+|++||++.|++++.
T Consensus 228 ~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 228 LPS---HVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred CCc---cCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 211 2233477899999999999999999999864
No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5e-36 Score=311.22 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=204.0
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||+++.+ +++.+|+|.+...... ...+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4788999999999999999754 6899999998654432 234678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.... ...++......++.|++.||.|||+. +|+|+||||+||+++.++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999999887542 23478899999999999999999999 99999999999999999999999999998765443
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ..............+...
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~---- 222 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS--------WKNLILKVCQGSYKPLPS---- 222 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC--------HHHHHHHHhcCCCCCCCc----
Confidence 33344568899999999998889999999999999999999999987321 111122222222211111
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+||+.||++||++.|++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 122347789999999999999999999864
No 139
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-36 Score=310.58 Aligned_cols=248 Identities=25% Similarity=0.406 Sum_probs=196.8
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
+.||+|+||.||+|..+ +++.||+|.+...... .....+.+|++++++++||||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPP--DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999764 7899999988654332 22457899999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--c
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--R 661 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~ 661 (796)
+|.+++.+.. ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+......... .
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999997543 2478999999999999999999999 9999999999999999999999999998765432111 1
Q ss_pred cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHH
Q 003780 662 TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQD 740 (796)
Q Consensus 662 ~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (796)
....++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+.......... ..
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~---------~~~~~~~~~~~~~~~~~---~~ 221 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN---------QQTREAIEQGVRLPCPE---LC 221 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH---------HHHHHHHHcCCCCCCcc---cC
Confidence 11223457999999998889999999999999999998 8888863211 11112222222212111 12
Q ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 741 IVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 741 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
...+.+++.+|++.+|++||++.|+++.|++
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 3357899999999999999999999998863
No 140
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.8e-36 Score=325.19 Aligned_cols=258 Identities=25% Similarity=0.295 Sum_probs=198.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+++.+ +++.||+|++...........+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999754 68999999997644333333456889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997532 2478889999999999999999999 9999999999999999999999999998765443
Q ss_pred CCC-ccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 658 SSN-RTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~ 227 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKEHF 227 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCcc
Confidence 222 223469999999999863 4577899999999999999999999873211 11111222111111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEF 769 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 769 (796)
............+.+++.+|+..++++ ||++++++++-
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 228 QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 111101112234677888877654443 88999999883
No 141
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-36 Score=332.61 Aligned_cols=254 Identities=23% Similarity=0.318 Sum_probs=198.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||+|+||.||+++.+ +++.||+|++...........+.+..|+.++.+++||||+++++++..++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999754 68999999997654433344567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997643 388999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 003780 658 SS-----------------------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRH 702 (796)
Q Consensus 658 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~ 702 (796)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0112469999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH
Q 003780 703 PGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQE 768 (796)
Q Consensus 703 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 768 (796)
||..... ......+........... .......+.+++.+|+. ||++|++ +.|+++|
T Consensus 235 Pf~~~~~--------~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 235 PFCSETP--------QETYRKVMNWKETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCH--------HHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 9973221 112222221111100000 00112236677888764 9999985 6777776
No 142
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.3e-36 Score=310.94 Aligned_cols=253 Identities=26% Similarity=0.450 Sum_probs=203.7
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|+||.||+|..+++..+|+|.+...... .+.+.+|+.++++++|||++++++++. ....++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence 4578899999999999999998888889999998765443 246889999999999999999999885 45678999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.++++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..+...
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 80 EYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999976432 3478999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCCc-cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNR-TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.... ....++..|+|||+..+..++.++||||||+++|+|++ |+.||.... .. .....+......+..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~-~~~~~~~~~~~~~~~- 225 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--------NR-EVLEQVERGYRMPCP- 225 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--------HH-HHHHHHHcCCCCCCC-
Confidence 2211 12235668999999988889999999999999999999 888986321 11 111222222221111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++|||++++.+.|+.
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 --QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1223458899999999999999999999998874
No 143
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.7e-36 Score=314.84 Aligned_cols=258 Identities=26% Similarity=0.357 Sum_probs=202.6
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|.+.+.||+|++|.||+|... .+..||+|.+....... ....+.+|+.++++++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ--DESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3467899999999999999999764 35778999886544322 235688999999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCc----ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cE
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYE----AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EA 643 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~ 643 (796)
+..++||||+++++|.+++++... ...+++..+.+++.||+.||+|||+. +++||||||+||+++.++ .+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcce
Confidence 999999999999999999976532 13588999999999999999999999 999999999999998764 58
Q ss_pred EEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 644 FVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
||+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||..... . .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~-~ 229 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------Q-E 229 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------H-H
Confidence 99999999876332211 111223567999999998899999999999999999997 9999873211 1 1
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....+......... ......+.+++.+|++.+|++||++.+|+++|+.
T Consensus 230 ~~~~~~~~~~~~~~---~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 230 VMEFVTGGGRLDPP---KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 12222222111111 1123457899999999999999999999999863
No 144
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.1e-36 Score=317.19 Aligned_cols=255 Identities=22% Similarity=0.237 Sum_probs=200.7
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||+||+|.. .+++.||+|.+...........+.+.+|++++++++|+||+++.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 366778999999999999965 4789999999976554433334567889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred eccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999988875432 3489999999999999999999999 99999999999999999999999999997654322
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
......|+..|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.... ... ..
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~-----~~~~~~~~~~~~~~~-~~~---~~ 226 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE-----KVKREEVDRRVLETE-EVY---SA 226 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhhhccc-ccc---Cc
Confidence 22334689999999999888899999999999999999999999873211 000111111111111 011 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPT-----MQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 768 (796)
.....+.+++..|++.||++||+ +++++.+
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 12234678999999999999999 6666665
No 145
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=306.64 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=215.0
Q ss_pred CccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|.+...+|+|+||.||+|.+ ..|..+|||.+..... .+++..|+.+|.+.+.|++|+++|.|......++||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 66788999999999999954 4799999999875542 56899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
|-.|+..+.++-+. ..+.+.++..+++..+.||+|||.. .-+|||||+-|||++.+|.+|++|||.|..+.+.-.
T Consensus 110 CGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 110 CGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred cCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 99999999997643 3589999999999999999999998 889999999999999999999999999987765444
Q ss_pred CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
....+.|||.|||||++..-.|..++||||+|+...||..|++||.+..+... -++-+..+++.-..+..
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA----------IFMIPT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA----------IFMIPTKPPPTFKKPEE 254 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce----------eEeccCCCCCCCCChHh
Confidence 45568899999999999999999999999999999999999999986554311 11222233333333334
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
-..++.+++++||-..|++|-|+-++++|-.-.+.
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 44568899999999999999999999999765544
No 146
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.4e-36 Score=314.23 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=200.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
++|++.+.||+|+||+||+|... +++ .+++|.+..... .....++..|+..+++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG--RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc--hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 46888899999999999999753 454 477787754322 2234678888889999999999999998864 457
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++++||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 78999999999999997643 2488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
...... ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ....+.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---------~~~~~~~~~~~~ 229 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP---------HEVPDLLEKGER 229 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHHHHCCCc
Confidence 543322 1223457778999999998899999999999999999998 9999863211 112222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
...... ....+.+++.+|++.||++|||+.|+++.|.....
T Consensus 230 ~~~~~~---~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 230 LAQPQI---CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111111 12346789999999999999999999999987543
No 147
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.8e-36 Score=318.36 Aligned_cols=256 Identities=23% Similarity=0.267 Sum_probs=202.5
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||.||++..+ +++.||+|.+...........+.+.+|+.++++++|++++++++.+...+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999654 789999999876554433334567889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999998865432 3488999999999999999999998 99999999999999999999999999987654322
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
......|+..|+|||++.+..++.++||||+||++|+|++|+.||..... ............. ...... .
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~-----~~~~~~~~~~~~~-~~~~~~---~ 226 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK-----KIKREEVERLVKE-VQEEYS---E 226 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCc-----cchHHHHHhhhhh-hhhhcC---c
Confidence 22234689999999999988899999999999999999999999974221 0011111111111 111111 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPT-----MQRVCQEF 769 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 769 (796)
.....+.+++.+||+.||++||| ++|+++|-
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~ 262 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP 262 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence 12234778999999999999999 88988763
No 148
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.3e-36 Score=310.47 Aligned_cols=254 Identities=27% Similarity=0.428 Sum_probs=203.0
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|+||.||+|+..++..||+|++...... .+.+.+|++++++++||||+++++++. .+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 3579999999999999999998777778999999754432 246889999999999999999999875 45678999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+... ..+++..+..++.|+++||+|+|+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999976432 3478999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCc-cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNR-TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.... ....++..|+|||+..+..++.++|||||||++|||+| |+.||.... ........ ........
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~--------~~~~~~~~-~~~~~~~~-- 224 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQV-ERGYRMPC-- 224 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------hHHHHHHH-hcCCCCCC--
Confidence 2221 22346678999999988889999999999999999999 888876321 11111111 11111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.......+.+++.+|++.||++||+++++++.|+..
T Consensus 225 -~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 225 -PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 112334578999999999999999999999998764
No 149
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.4e-36 Score=309.90 Aligned_cols=247 Identities=23% Similarity=0.362 Sum_probs=196.7
Q ss_pred eeecccceeEEEEEc---cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 506 CIGTGGYGSVYKAQL---PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.||+|+||.||+|.+ ++++.+|+|++...... ....+++.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-PALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-HHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999954 36789999998755432 234568899999999999999999999885 4567899999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN-- 660 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-- 660 (796)
|+|.+++.... .+++..+..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999997543 488999999999999999999998 9999999999999999999999999999876443221
Q ss_pred -ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 661 -RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 661 -~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.....++..|+|||.+....++.++|||||||++|||++ |+.||..... ....+.+..........
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---------~~~~~~i~~~~~~~~~~--- 221 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---------NEVTQMIESGERMECPQ--- 221 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHCCCCCCCCC---
Confidence 112234578999999988888999999999999999998 9999873211 11222222222222111
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.....+.+++.+|++.||++||++++|.+.|+..
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1234578999999999999999999999999865
No 150
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.4e-36 Score=315.44 Aligned_cols=260 Identities=23% Similarity=0.324 Sum_probs=204.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|++.+.||+|+||.||+|..+ .+..||+|.+....... ....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR--ERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH--HHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4678999999999999999999643 25689999887554322 234678899999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCc-------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcE
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYE-------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
...++||||+++|+|.+++.+... ....++..+.+++.|++.||.|||++ +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 23356778899999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 644 FVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
+++|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||.... ....
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--------~~~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--------NEQV 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHH
Confidence 99999999865432211 122235678999999998889999999999999999998 788876321 1112
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
............. ......+.+++.+|++.||++|||+.++++.++...
T Consensus 231 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGYLDQP----DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 2222222211111 112245889999999999999999999999998753
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-36 Score=314.81 Aligned_cols=253 Identities=28% Similarity=0.394 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++..++..++|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4788889999999999999965 46899999998755332 2346788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999987543 488999999999999999999999 9999999999999999999999999998766543
Q ss_pred CCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 658 SSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
........|++.|+|||++. ...++.++||||+||++|+|++|+.||..... .............+...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 231 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP--------MRALFLMTKSNFQPPKL 231 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc--------hhhHHhhhccCCCCCcc
Confidence 33334456899999999874 45578899999999999999999999863221 01111111111111110
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.........+.+++.+|++.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0001112347789999999999999999999875
No 152
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.4e-35 Score=308.11 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=207.5
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|+..+.||+|+||.||.++. .+++.+++|.+........ ..+++.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK-ERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchh-HHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 488899999999999999964 4689999999876543332 24678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++|+|.+++.+.. ...+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999998653 23578999999999999999999998 99999999999999999999999999998765444
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......+++.|+|||+..+..++.++||||||+++|||++|+.||.... ..............+.. .
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~----~ 223 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN--------PLNLVVKIVQGNYTPVV----S 223 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCCc----c
Confidence 33344568999999999988888999999999999999999999986321 11222222222222221 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++||+++|+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 2233477899999999999999999999874
No 153
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.8e-36 Score=318.23 Aligned_cols=259 Identities=25% Similarity=0.393 Sum_probs=205.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 569 (796)
..++|++.+.||+|+||.||++... ....+|+|.+....... ....+.+|++++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK--DLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH--HHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 4467899999999999999999753 24689999987654322 245788999999999 79999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcC-------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDY-------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNIL 636 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIl 636 (796)
++..++||||+++|+|.+++++.. ....+++..+++++.|++.||+|||+. +|+||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 999999999999999999997531 234588999999999999999999998 9999999999999
Q ss_pred ecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCC
Q 003780 637 LNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSP 713 (796)
Q Consensus 637 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~ 713 (796)
++.++.+||+|||.++.+...... .....++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 240 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---- 240 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----
Confidence 999999999999999876543211 112234578999999988889999999999999999997 8898763211
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
......+......... ......+.+++.+|++.||++|||++|++++|+..
T Consensus 241 -----~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 241 -----EELFKLLKEGYRMEKP---QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred -----HHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1111222222211111 12233578999999999999999999999999764
No 154
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.8e-36 Score=325.21 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=200.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+++.+ +++.||+|.+...........+.+.+|..++..++|+||+++++++..++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999755 68899999997644333333456888999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997632 2478889999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 658 SSN-RTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+.......
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~ 227 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHEERF 227 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC--------HHHHHHHHHcCCCcc
Confidence 222 223569999999998875 467889999999999999999999987321 111222222221111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQE 768 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 768 (796)
............+.+++.+|+..++++ |++++++++|
T Consensus 228 ~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 111111112345778999999876654 4688888876
No 155
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.6e-36 Score=324.65 Aligned_cols=257 Identities=25% Similarity=0.303 Sum_probs=199.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+++.+ +++.||+|++...........+.+..|+.++..++|++|+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999765 57889999987544333333456888999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976322 478889999999999999999999 9999999999999999999999999998765433
Q ss_pred CCC-ccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 658 SSN-RTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+.......
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~ 227 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHKERF 227 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC--------HHHHHHHHhCCCccc
Confidence 222 23356999999999886 3457889999999999999999999987321 112222222221111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQE 768 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 768 (796)
............+.+++.+|+..+|++ |++++|+++|
T Consensus 228 ~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 111111112334778888988665544 6899999988
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.7e-36 Score=316.80 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=203.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|++.+.||+|++|.||+|.. .+++.||+|.+....... .+.+.+|+.+++.++||||+++++++..+...++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 35788999999999999999974 478999999987655432 35688999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++++. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999998653 378889999999999999999999 999999999999999999999999999886554
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ............ +... .
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-~~~~-~ 238 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGT-PELQ-N 238 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH--------HHhHHHHhcCCC-CCCC-C
Confidence 33333345688999999999888889999999999999999999999864221 011111111111 1100 0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.......+.+++.+|++.||++||++.|++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 11222447789999999999999999999987
No 157
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.4e-36 Score=320.27 Aligned_cols=259 Identities=20% Similarity=0.266 Sum_probs=199.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|.+.+.||+|+||.||+|+.+ +++.||+|++........ ...+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc--chhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 57899999999999999999754 688999999875543221 245778999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99985 8888876543 2478888999999999999999999 9999999999999999999999999999765443
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc----------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD---------- 726 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 726 (796)
........+++.|+|||.+.+ ..++.++||||+||++|+|+||+.||...... .........+.
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhh
Confidence 333334467899999998765 45788999999999999999999998643210 00000000000
Q ss_pred --------CCCCCc----cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 727 --------SRLSPP----VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 727 --------~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
...... ..........++.+++.+|++.||++|||++|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 000000 00000112234779999999999999999999998743
No 158
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1e-35 Score=315.15 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=203.7
Q ss_pred CCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
+|++.+.||+|+||.||+|... ....+++|.+...... ...+.+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999642 2367899988755433 2246789999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcC---------------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 003780 574 FLIYKYMKRGSLFCFLRNDY---------------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISS 632 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 632 (796)
++|+||+.+|+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999986431 113478899999999999999999998 999999999
Q ss_pred CCeEecCCCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 003780 633 NNILLNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSS 709 (796)
Q Consensus 633 ~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~ 709 (796)
+||++++++.+||+|||+++....... ......++..|+|||...+..++.++||||||+++|||++ |..||....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~- 234 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA- 234 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-
Confidence 999999999999999999986533221 1122345678999999988889999999999999999998 999986321
Q ss_pred CCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 710 LSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...+.+............ .....+.+++.+|++.+|++||+++|+++.|++..
T Consensus 235 --------~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 235 --------PERLFNLLKTGYRMERPE---NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred --------HHHHHHHHhCCCCCCCCC---CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 112222333322222111 12235789999999999999999999999998753
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.4e-36 Score=316.12 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=202.4
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.+|.+.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.+++.++||||+++++++..++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG--PLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 35777889999999999999753 3578999999755432 224578899999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcC-------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY-------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
.++++||+++++|.+++.... ....+++..+.+++.|+++||+|+|+. +|+||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence 999999999999999986321 123478888999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+||++|||++ |..||....
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-------- 231 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------- 231 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 999999999998865432211 122345778999999988889999999999999999998 888876321
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.......+......+ .. ......+.+++.+|++.+|++||+++||++.|+.
T Consensus 232 ~~~~~~~i~~~~~~~-~~---~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 232 NQDVIEMIRNRQVLP-CP---DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHHcCCcCC-CC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 122222222222211 11 1223447899999999999999999999999864
No 160
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.1e-36 Score=316.98 Aligned_cols=264 Identities=23% Similarity=0.314 Sum_probs=203.6
Q ss_pred hcCCccceeeecccceeEEEEEccC-----------------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN-----------------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 560 (796)
.++|++.+.||+|+||.||+|...+ +..||+|.+...... ...+.+.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCCE
Confidence 4578999999999999999986532 356899998766443 235688999999999999999
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHHHHhhcCc--------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE--------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISS 632 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 632 (796)
+++++++..++..++|+||+++++|.+++.+... ...+++..+..++.|++.||+|||+. +|+||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 9999999999999999999999999999976531 12588999999999999999999998 999999999
Q ss_pred CCeEecCCCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccc
Q 003780 633 NNILLNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GRHPGELLS 708 (796)
Q Consensus 633 ~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt--g~~p~~~~~ 708 (796)
+||+++.++.++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999976543221 1223446778999999988889999999999999999998 667775321
Q ss_pred cCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 709 SLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
. ............................++.+++.+|++.||++|||+.|+++.|++
T Consensus 239 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 D-----QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred h-----HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1 000001111100000000000011122458899999999999999999999998863
No 161
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.5e-35 Score=310.79 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=201.2
Q ss_pred CccceeeecccceeEEEEEccC----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce----
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC---- 572 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 572 (796)
|.+.+.||+|+||.||+|.... +..||+|+++...... ...+.+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY-SEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5678899999999999997542 4789999987654332 234678999999999999999999999876554
Q ss_pred --eeEEEeeccCCcHHHHHhhcC---cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 573 --MFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 573 --~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
.++|+||+++|+|..++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 789999999999999986432 224588999999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHh
Q 003780 648 FGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 648 fg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
||.++.+...... .....++..|+|||++.+..++.++|||||||++|||++ |..||.... ........
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--------~~~~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--------NHEIYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH
Confidence 9999876433221 112235678999999988889999999999999999999 888886322 11122222
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.... .... +......+.+++.+|++.||++||++.|++++|++.
T Consensus 229 ~~~~-~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 RHGN-RLKQ---PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HcCC-CCCC---CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221 1111 112334588999999999999999999999999764
No 162
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.4e-36 Score=317.50 Aligned_cols=263 Identities=24% Similarity=0.311 Sum_probs=200.0
Q ss_pred cCCccceeeecccceeEEEEEccC---------------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN---------------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKL 563 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 563 (796)
++|++.+.||+|+||.||+++.++ ...||+|.++..... .....+.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK--TARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH--HHHHHHHHHHHHHHhCCCCCcCeE
Confidence 578999999999999999986532 235899998765332 224578999999999999999999
Q ss_pred EeEEEecceeeEEEeeccCCcHHHHHhhcCc---------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE---------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 564 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
++++...+..++||||+++++|.+++..... ...+++..+.+++.|+++||+|||+. +++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999865321 12368889999999999999999999 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccC
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GRHPGELLSSL 710 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt--g~~p~~~~~~~ 710 (796)
|+++.++.+||+|||++......... .....++..|+|||+..+..++.++|||||||++|+|++ |..||.....
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~- 238 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD- 238 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-
Confidence 99999999999999999765432211 122335678999999988889999999999999999998 5667663211
Q ss_pred CCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 711 SSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.............................+.+++.+|++.||++||++++|++.|++
T Consensus 239 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 ----EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ----HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 000001111111110000000011122358899999999999999999999998863
No 163
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.6e-36 Score=316.42 Aligned_cols=258 Identities=27% Similarity=0.405 Sum_probs=200.9
Q ss_pred cCCccceeeecccceeEEEEEccC-Cc--EEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-GK--VVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||.||+|..++ +. .+++|.++..... ...+.+.+|+++++++ +||||+++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE--NDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH--HHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 578899999999999999997653 33 4788887643322 2245789999999999 7999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC
Q 003780 575 LIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL 641 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 641 (796)
+|+||+++|+|.+++++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 99999999999999975421 13478899999999999999999998 999999999999999999
Q ss_pred cEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 642 EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 642 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |+.||..... ..
T Consensus 157 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~~- 226 (297)
T cd05089 157 ASKIADFGLSRGEEVY-VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------AE- 226 (297)
T ss_pred eEEECCcCCCccccce-eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HH-
Confidence 9999999998643211 11111223557999999988889999999999999999997 9999863211 11
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
............... .....+.+++.+|++.+|.+||+++++++.|+....
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 227 LYEKLPQGYRMEKPR---NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 112222222221111 122347899999999999999999999999876543
No 164
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.2e-36 Score=328.33 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=189.4
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc---CCCceeeEEeEEEecceeeEEEeeccC
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI---AHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
||+|+||+||+|+.+ +++.||+|++.............+..|..++... +||||+++++++..+...++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999754 6899999999764433322234555677776655 699999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99999887543 388999999999999999999999 999999999999999999999999999976433333334
Q ss_pred ccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH
Q 003780 663 IVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
...||+.|+|||++.+. .++.++||||+||++|+|++|+.||.... .......+........... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~~~----~~ 222 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED--------TQQMYRNIAFGKVRFPKNV----LS 222 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--------HHHHHHHHHcCCCCCCCcc----CC
Confidence 56799999999998754 47899999999999999999999986321 1112222222221111111 12
Q ss_pred HHHHHHHHHcCCCCCCCCCC----HHHHHHH
Q 003780 742 VLVTTVALACLHSKPKFRPT----MQRVCQE 768 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs----~~evl~~ 768 (796)
..+.+++.+||+.||++||+ +.|+++|
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 34678999999999999984 5666554
No 165
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5e-36 Score=327.38 Aligned_cols=263 Identities=23% Similarity=0.254 Sum_probs=197.7
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK---- 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 571 (796)
..++|++.+.||+|+||.||++.. .+|+.||+|++....... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch-hHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 457899999999999999999975 468999999997653322 22457789999999999999999999986543
Q ss_pred --eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 572 --CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 572 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
..++||||+++ ++.+.++. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 57999999976 56665543 277888899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchhh-
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQK- 718 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~~- 718 (796)
+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+... .+.....
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 99764332 22233468999999999999999999999999999999999999997432110 0000000
Q ss_pred ---hHHHHhhcCCCCCc---------------cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 719 ---IMLIDVLDSRLSPP---------------VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 719 ---~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.............. ...........+.+++.+||+.||++|||++|+++|-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000110000000 00000011234789999999999999999999999853
No 166
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.1e-36 Score=313.77 Aligned_cols=254 Identities=26% Similarity=0.400 Sum_probs=200.0
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec---
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK--- 570 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~--- 570 (796)
.+++.|++.+.||+|+||.||+|..+ +++.||+|++...... ...+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 35677889999999999999999754 6889999998755322 24678899999998 699999999998753
Q ss_pred ---ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 571 ---KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 571 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
...++||||+++|+|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 46899999999999999987643 23478999999999999999999999 999999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
||++..............|++.|+|||++. +..++.++||||+||++|||++|+.||..... . ....
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-----~---~~~~ 226 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----M---RALF 226 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-----H---HHHH
Confidence 999987654333344466899999999886 34578899999999999999999999863221 1 1111
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
............. .....+.+++.+||+.||.+|||++|++++
T Consensus 227 ~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 227 LIPRNPAPRLKSK---KWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHhcCCCCCCCCC---CcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 1111111111111 112347899999999999999999999875
No 167
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-35 Score=310.08 Aligned_cols=256 Identities=27% Similarity=0.403 Sum_probs=197.2
Q ss_pred CccceeeecccceeEEEEEccC-Cc--EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------c
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPN-GK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------K 571 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 571 (796)
|.+.+.||+|+||.||+|+..+ ++ .||+|.+....... ...+.+..|+++++.++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR-SEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3467889999999999997654 32 68999887653322 2256788999999999999999999987532 2
Q ss_pred eeeEEEeeccCCcHHHHHhhcC---cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
..++|+||+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 4689999999999998874321 223478999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhh
Q 003780 649 GTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 649 g~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
|+++.+...... .....+++.|+|||+..+..++.++|||||||++|||++ |+.||.... ... ..+.+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~-~~~~~ 227 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--------NSE-IYDYL 227 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHH-HHHHH
Confidence 999876433221 122346778999999998889999999999999999999 788886321 111 11112
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.......... .....+.+++.+||+.||++|||+.|+++.|++.
T Consensus 228 ~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 RQGNRLKQPP---DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HcCCCCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 2111111111 1223478999999999999999999999999763
No 168
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.9e-36 Score=326.99 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=205.1
Q ss_pred HhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~ 569 (796)
..++|.+.+.||+|+||.||+|+++ .++.||+|++....... ..+.+.+|++++.++. ||||+++++++..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS--EKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh--HHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 4457888899999999999999743 35689999997654332 2357889999999997 9999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCc-------------------------------------------------------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------- 594 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 594 (796)
++..++|+||+++|+|.+++++...
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 9999999999999999999975421
Q ss_pred ----------------------------------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 595 ----------------------------------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 595 ----------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
...+++....+++.|++.||+|||+. +|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcce
Confidence 12367778889999999999999998 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCC
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLS 711 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~ 711 (796)
|++++++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~--- 346 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP--- 346 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC---
Confidence 9999999999999999986533211 1222346788999999998889999999999999999998 888976321
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
........+.......... .....+.+++.+||+.+|++||+++||++.|+..
T Consensus 347 -----~~~~~~~~~~~~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 347 -----MNEQFYNAIKRGYRMAKPA---HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -----chHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111222222222221111 1234588999999999999999999999999864
No 169
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.3e-35 Score=307.24 Aligned_cols=253 Identities=25% Similarity=0.422 Sum_probs=202.3
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|.+.+.||+|++|.||+|..+++..+|+|.+...... .+.+.+|++++++++|||++++++++. .+..++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM----PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc----HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 3568899999999999999998877778999988654432 346888999999999999999999885 45678999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.++++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 80 EFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 9999999999997643 23478999999999999999999998 9999999999999999999999999999866433
Q ss_pred CCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
... .....++..|+|||+..+..++.++||||||+++|||++ |+.||.... ...... .+.........
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~-~~~~~~~~~~~- 225 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--------NREVLE-QVERGYRMPCP- 225 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHH-HHHcCCCCCCC-
Confidence 221 122335678999999988889999999999999999999 899986321 111111 12222211111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|+..||++||+++++.+.|++
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 --QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1223458899999999999999999999999875
No 170
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.7e-36 Score=318.34 Aligned_cols=261 Identities=25% Similarity=0.364 Sum_probs=205.2
Q ss_pred hcCCccceeeecccceeEEEEEcc--------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++|.+.+.||+|+||.||+++.. ++..+|+|.+...... ....++..|+++++++ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 467999999999999999999642 2357999999765322 2245788899999999 7999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
..+..++||||+++|+|.+++..... ...+++..+.+++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999976432 13478999999999999999999998 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||.++......... ....+++.|+|||...+..++.++|||||||++|||++ |+.||....
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~---- 247 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---- 247 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC----
Confidence 99999999999999997654322111 11224568999999988889999999999999999998 888875211
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
.......+......+.. ......+.+++.+|++.+|++||++.|+++.|++....
T Consensus 248 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 -----VEELFKLLKEGHRMDKP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -----HHHHHHHHHcCCCCCCC---CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 11122222222221111 12233577899999999999999999999999886543
No 171
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.8e-35 Score=308.35 Aligned_cols=255 Identities=29% Similarity=0.427 Sum_probs=205.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|... +++.+|+|.+...... ..+.+.+|++++++++||||+++++++...+..+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 357899999999999999999754 6788999999765433 246889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999987642 2488999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
.........++..|+|||.+.+. .++.++||||||+++|+|++|+.||..... .............+..
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~--------~~~~~~~~~~~~~~~~ 225 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP--------MRALFLISKSNFPPPK 225 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhccCCCcc
Confidence 33233345688899999998776 788999999999999999999999863221 1111111111111111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..........+.+++.+|++.+|.+||++.+++.+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11122334568899999999999999999999864
No 172
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.7e-35 Score=309.72 Aligned_cols=257 Identities=24% Similarity=0.369 Sum_probs=200.2
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
.+++.+.....||+|+||.||+|... +++.||+|.+....... .+.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY---VQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH---HHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 35566667789999999999999754 67889999887654332 457899999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeeccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARL 653 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~ 653 (796)
+|+||+++++|.+++.........++..+..++.|+++||+|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998643322237888889999999999999998 9999999999999986 67899999999976
Q ss_pred cCCCCCCccccccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
............|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ..............+
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 231 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE-------PQAAMFKVGMFKIHP 231 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC-------hhhhHhhhhhhccCC
Confidence 644333333345889999999986543 77899999999999999999999863211 000111110001111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
... ......+.+++.+|++.+|++|||+.|++++
T Consensus 232 ~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIP---ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCC---cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 111 1122347789999999999999999999876
No 173
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.2e-35 Score=315.61 Aligned_cols=263 Identities=23% Similarity=0.330 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEcc-----------------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCcee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-----------------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV 561 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 561 (796)
++|++.+.||+|+||.||+++.. ++..||+|++...... ...+.+.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK--NARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcc
Confidence 56899999999999999998532 2456899998755322 2245789999999999999999
Q ss_pred eEEeEEEecceeeEEEeeccCCcHHHHHhhcCc--------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 003780 562 KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE--------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSN 633 (796)
Q Consensus 562 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~ 633 (796)
++++++..++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 999999999999999999999999999876431 13477888999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh--CCCCCccccc
Q 003780 634 NILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GRHPGELLSS 709 (796)
Q Consensus 634 NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt--g~~p~~~~~~ 709 (796)
||+++.++.++|+|||+++.+...... .....+++.|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999999865432211 122334678999999888889999999999999999998 7788763221
Q ss_pred CCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 710 LSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
. ............................+.+++.+|++.||++||++.||.+.|++
T Consensus 240 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 E-----QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred H-----HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 00000111111100000000011122457899999999999999999999998863
No 174
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-35 Score=316.80 Aligned_cols=263 Identities=24% Similarity=0.383 Sum_probs=206.7
Q ss_pred HhcCCccceeeecccceeEEEEEc--------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL--------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFC 567 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 567 (796)
..++|.+.+.||+|+||.||+|+. .++..||+|.+...... ...+.+.+|+.+++.+ +||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch--HHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 356788999999999999999963 13457999988754322 2246789999999999 799999999999
Q ss_pred EecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 568 LHKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 568 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
......++||||+++|+|.+++.+... ...+++..+..++.||++||+|||+. +++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999976421 23478889999999999999999999 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCC
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLS 711 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~ 711 (796)
|+++.++.+||+|||.++........ .....+++.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--- 244 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--- 244 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC---
Confidence 99999999999999999876543222 122335678999999988889999999999999999998 788875321
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
.. .....+......... ......+.+++.+||+.+|++||++.|+++.|++.....
T Consensus 245 -----~~-~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 245 -----VE-ELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred -----HH-HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 11 111222222211111 122345788999999999999999999999998765433
No 175
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-35 Score=311.02 Aligned_cols=255 Identities=24% Similarity=0.345 Sum_probs=200.1
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV--ELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh--HHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 3678889999999999999964 57899999998755322 22457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 79 EFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred ecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999996542 267888899999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||.......... ............. .+... .
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~--~ 222 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDED-PPVLP--V 222 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhccC-CCCCC--C
Confidence 2233568999999999998889999999999999999999999987432211100 0011111111111 11110 0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++||+++|++++-.-
T Consensus 223 ~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 223 GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence 1122347899999999999999999999988543
No 176
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.6e-35 Score=315.17 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=205.1
Q ss_pred hcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 570 (796)
.++|.+.+.||+|+||.||++.. ..+..||+|++...... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS--SEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh--HHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 35789999999999999999963 23568999998765432 2245789999999999 799999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
+..++||||+++|+|.+++++... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999975432 2379999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 651 ARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 651 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
++....... ......++..|+|||.+.+..++.++||||+||++|||++ |+.||..... ..........
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~--------~~~~~~~~~~ 259 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV--------DSKFYKLIKE 259 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc--------hHHHHHHHHc
Confidence 986543321 1122335678999999998889999999999999999998 9999863221 1112222222
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
........ .....+.+++.+|++.+|++||++.|+++.|++.
T Consensus 260 ~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 260 GYRMAQPE---HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCcCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 22211111 1123588999999999999999999999999763
No 177
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=323.62 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=204.9
Q ss_pred CCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-C-----CceeeEEeEEEecce
Q 003780 500 DFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-H-----RNIVKLYGFCLHKKC 572 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----pniv~l~~~~~~~~~ 572 (796)
+|++.+.||+|+||.|-+|. .++++.||||+++.... +.++...|+.+|..++ | -|+|++++||...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 89999999999999999995 56799999999987654 3567888999999997 4 399999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC--CcEEEeeecc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK--LEAFVADFGT 650 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~ 650 (796)
.|||+|.++. +|+++++.+.- ..++...+..++.||+.||..||.. +|||+||||+|||+.+. ..+||+|||.
T Consensus 263 lciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999999866 99999997754 3489999999999999999999999 99999999999999754 4799999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC--------------------
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL-------------------- 710 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~-------------------- 710 (796)
|++....-. .+..+..|+|||++.|.+|+.+.||||||||++||++|.+-|...+..
T Consensus 338 Sc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 338 SCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred ccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 997654332 456788899999999999999999999999999999997666432210
Q ss_pred --------CC-CC------c----------hhhhHHHHhhcCCCCC-c---cc-hhhHHHHHHHHHHHHHcCCCCCCCCC
Q 003780 711 --------SS-PS------S----------DQKIMLIDVLDSRLSP-P---VD-RMVMQDIVLVTTVALACLHSKPKFRP 760 (796)
Q Consensus 711 --------~~-~~------~----------~~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~l~~li~~cl~~dP~~RP 760 (796)
.. .. . ..........+....+ . .. .....+...+.+++++|++.||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 00 00 0 0000011111111111 1 11 11213455689999999999999999
Q ss_pred CHHHHHHHHhh
Q 003780 761 TMQRVCQEFLT 771 (796)
Q Consensus 761 s~~evl~~L~~ 771 (796)
|+.|.++|-.-
T Consensus 495 tp~qal~Hpfl 505 (586)
T KOG0667|consen 495 TPAQALNHPFL 505 (586)
T ss_pred CHHHHhcCccc
Confidence 99999999643
No 178
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.6e-35 Score=306.20 Aligned_cols=252 Identities=23% Similarity=0.381 Sum_probs=202.8
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-cceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-KKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lV~ 577 (796)
+|++.+.||+|++|.||++..+ +++.||+|++....... ...+.+.+|++++++++|||++++++.+.. +...++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4888999999999999999754 57899999987544332 224578899999999999999999998764 44678999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999997642 23478999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........+++.|+|||+..+..++.++||||+|+++|+|++|+.||.... ............... ..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--------~~~~~~~~~~~~~~~-~~--- 223 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--------MNSLVYRIIEGKLPP-MP--- 223 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcCCCC-Cc---
Confidence 333344568899999999999889999999999999999999999986321 111112222222211 11
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|++.||++||++.+++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1223457899999999999999999999876
No 179
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.3e-35 Score=312.25 Aligned_cols=257 Identities=24% Similarity=0.346 Sum_probs=204.1
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|++.+.||+|+||.||+|..+ .+..||+|.+....... ....+.+|+.++..++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR--ERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH--HHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 457889999999999999999654 24789999986554322 2357889999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc-------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE-------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 99999999999999999875432 22468889999999999999999998 999999999999999999999
Q ss_pred EeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHH
Q 003780 645 VADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (796)
|+|||+++.+..... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.... .....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~~~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--------NEEVL 231 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--------HHHHH
Confidence 999999986543321 1223446788999999988889999999999999999998 888986321 11111
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....... ...... .....+.+++.+|++.+|++|||+.++++.|++
T Consensus 232 ~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 232 KFVIDGG-HLDLPE---NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhcCC-CCCCCC---CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1122211 111111 123458899999999999999999999998863
No 180
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.9e-35 Score=311.33 Aligned_cols=263 Identities=25% Similarity=0.404 Sum_probs=204.9
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.++|++.+.||+|+||+||+|.+ .+|+ .||+|++....... ..+.+.+|+.++..++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK--ANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH--HHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 35788899999999999999974 3454 48999987554332 246788999999999999999999999754 5
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++++||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 679999999999999997643 2488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 653 LLDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 653 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
......... ....+++.|+|||...+..++.++|||||||++|||++ |..||+... .......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---------~~~~~~~~~~~~ 228 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP---------AREIPDLLEKGE 228 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC---------HHHHHHHHHCCC
Confidence 765332211 11234678999999988889999999999999999998 889986321 111222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFE 781 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 781 (796)
..+... .....+.+++.+|++.||++||++.|+++.+++..... .+|.
T Consensus 229 ~~~~~~---~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~-~~~~ 276 (279)
T cd05109 229 RLPQPP---ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP-SRFV 276 (279)
T ss_pred cCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC-cCeE
Confidence 211111 12335778999999999999999999999998775433 3443
No 181
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-35 Score=306.55 Aligned_cols=246 Identities=22% Similarity=0.357 Sum_probs=194.5
Q ss_pred eecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 507 IGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
||+|+||.||+|..+ .+..||+|++..... ....+.+.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 899999999999653 456799999876533 223467899999999999999999999885 45788999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc--
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR-- 661 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-- 661 (796)
+|.+++.... ..+++..+.+++.|+++||+|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999987532 3488999999999999999999998 99999999999999999999999999998654332211
Q ss_pred -cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 662 -TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 662 -~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
....+++.|+|||.+....++.++|||||||++|||++ |+.||..... ......+.......... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~---~ 222 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG---------PEVMSFIEQGKRLDCPA---E 222 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH---------HHHHHHHHCCCCCCCCC---C
Confidence 11223568999999988889999999999999999996 9999874221 11222222222222111 2
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
....+.+++.+||+.||++||++.+|.+.|+..
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 234577899999999999999999999999865
No 182
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-35 Score=312.42 Aligned_cols=259 Identities=20% Similarity=0.321 Sum_probs=206.3
Q ss_pred hcCCccceeeecccceeEEEEEccC-----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-cc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN-----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-KK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 571 (796)
.++|++.+.||+|+||.||+|...+ +..|++|++...... ...+.+.+|+.++++++||||+++++++.. +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASE--IQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678899999999999999998665 788999988754322 234678899999999999999999998876 56
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcc-----cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEA-----VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
..++++||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999999765322 4588999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHH
Q 003780 647 DFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 647 Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|||+++.+...... .....++..|+|||++.+..++.++|||||||++||+++ |+.||..... .....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~ 230 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---------FEMAA 230 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---------HHHHH
Confidence 99999865433221 112335678999999988889999999999999999999 9999873221 11222
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.+.......... .....+.+++.+|++.||++|||+.|+++.|+...
T Consensus 231 ~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 231 YLKDGYRLAQPI---NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred HHHcCCCCCCCC---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 222222211111 12234789999999999999999999999998754
No 183
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.7e-35 Score=307.37 Aligned_cols=252 Identities=22% Similarity=0.339 Sum_probs=205.2
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.+|++.. .+|+.||+|++........ ..+++.+|+.++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPK-EREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChH-HHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 488899999999999999964 4789999999876543322 24678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999999875432 3478899999999999999999998 99999999999999999999999999998665433
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......|++.|+|||+..+..++.++|||||||++|+|++|+.||... .........+........ .
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~----~ 223 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG--------NMKNLVLKIIRGSYPPVS----S 223 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC--------CHHHHHHHHhcCCCCCCc----c
Confidence 3333455888999999998888999999999999999999999998631 112222222222222111 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++||++.||+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 223347899999999999999999999986
No 184
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-35 Score=309.04 Aligned_cols=250 Identities=29% Similarity=0.437 Sum_probs=204.2
Q ss_pred cCCccceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|..++ ++.|++|.+..... .+++.+|++++++++||||+++++++..+...++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578899999999999999998664 89999999865432 468999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999987543 3489999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........++..|+|||++.+..++.++||||||+++|+|++|+.||...... ..... .......... ..
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--------~~~~~-~~~~~~~~~~-~~ 222 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--------RAIFM-IPNKPPPTLS-DP 222 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--------hhhhh-hccCCCCCCC-ch
Confidence 33334455888999999998888999999999999999999999998732211 11111 1111111111 01
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|++.||++|||+.|++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1122357889999999999999999999875
No 185
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.5e-35 Score=304.98 Aligned_cols=247 Identities=24% Similarity=0.380 Sum_probs=198.0
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCc
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGS 584 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gs 584 (796)
+.||+|+||.||+|..++++.+|+|.+....... ....+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE--LKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH--HHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 3689999999999998889999999987654332 23468899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC-ccc
Q 003780 585 LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN-RTI 663 (796)
Q Consensus 585 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 663 (796)
|.+++.... ..+++..+..++.|++.||.|+|+. +++||||||+||+++.++.+|++|||++......... ...
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999987543 2478999999999999999999998 9999999999999999999999999998754432211 112
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
..+++.|+|||+..+..++.++||||||+++|+|++ |..||..... .... ..+......... .....
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--------~~~~-~~~~~~~~~~~~---~~~~~ 221 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--------QQAR-EQVEKGYRMSCP---QKCPD 221 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--------HHHH-HHHHcCCCCCCC---CCCCH
Confidence 234678999999998889999999999999999998 9999863211 1111 111111111111 11234
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.+.+++.+|++.+|++||++.|++++|.
T Consensus 222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 5889999999999999999999999875
No 186
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.7e-35 Score=312.48 Aligned_cols=263 Identities=25% Similarity=0.372 Sum_probs=200.5
Q ss_pred cCCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--c
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--K 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~ 571 (796)
.+|++.+.||+|+||.||++.. .+++.||+|++...... ..+.+.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4788899999999999999964 35889999998765432 246789999999999999999999987543 4
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|+||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 6889999999999999997543 2478999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCc---cccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC-----CC--chhhhHH
Q 003780 652 RLLDSDSSNR---TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS-----PS--SDQKIML 721 (796)
Q Consensus 652 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~-----~~--~~~~~~~ 721 (796)
+......... ....++..|+|||+..+..++.++|||||||++|||++|..|+........ .. .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764332211 111234469999999888899999999999999999998877542211000 00 0000111
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.+......+.. ......+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 236 ~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAP---PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1222222111111 11223488999999999999999999999999865
No 187
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.4e-35 Score=307.28 Aligned_cols=255 Identities=27% Similarity=0.463 Sum_probs=206.3
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..++++.||+|.+...... .+++.+|+.++++++||||+++++++......++|
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 34689999999999999999998888889999998765433 35788999999999999999999999998999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+.....
T Consensus 80 ~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 999999999999976432 3488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....++..|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ....... +.........
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~-~~~~~~~~~~ 226 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------NREVLEQ-VERGYRMPRP 226 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHH-HHcCCCCCCC
Confidence 2111 112224568999999998889999999999999999998 999985321 1112222 2222111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
. .....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~---~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 P---NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred C---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1 113358899999999999999999999998874
No 188
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.8e-35 Score=311.58 Aligned_cols=255 Identities=26% Similarity=0.425 Sum_probs=201.6
Q ss_pred cCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.+|...+.||+|+||.||++.. .++..+|+|.+...... ..+.+.+|+++++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHH---HHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 4677789999999999999953 24668999987754432 24578999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCc------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYE------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
.++|+||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999976432 13478899999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchh
Q 003780 641 LEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~ 717 (796)
+.+||+|||++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~ 230 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS--------N 230 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC--------H
Confidence 9999999999976543221 1122335678999999998899999999999999999998 899986321 1
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....... .......... .....+.+++.+||+.||++||+++||.+.|+.
T Consensus 231 ~~~~~~~-~~~~~~~~~~---~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 231 TEAIECI-TQGRELERPR---TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHH-HcCccCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1112112 1111111111 122347799999999999999999999998863
No 189
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-35 Score=316.60 Aligned_cols=258 Identities=27% Similarity=0.407 Sum_probs=200.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCc--EEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.+...... ...+.+.+|++++.++ +||||+++++++...+..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCH--HHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 357889999999999999999754 454 4577776543322 2346788999999999 899999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 574 FLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
++|+||+++|+|.+++++... ...+++..+..++.|+++|++|||+. +++||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999975421 23578999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhh
Q 003780 641 LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (796)
+.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||..... .
T Consensus 161 ~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~- 230 (303)
T cd05088 161 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------A- 230 (303)
T ss_pred CcEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--------H-
Confidence 99999999998643211 11112234667999999988889999999999999999998 9999863221 1
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...+.+......... ......+.+++.+|++.+|++||+++++++.+++..
T Consensus 231 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 231 ELYEKLPQGYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred HHHHHHhcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111122222111111 112234789999999999999999999999987653
No 190
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.8e-35 Score=305.77 Aligned_cols=250 Identities=26% Similarity=0.421 Sum_probs=204.7
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 357888999999999999999875 88999999976654 2467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999976532 3489999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. ....+..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.........
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~-- 221 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---------LKDVVPHVEKGYRMEAP-- 221 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC---------HHHHHHHHhcCCCCCCc--
Confidence 11 2235667999999988889999999999999999997 999986321 11112222222111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|+..+|++||+++|++++|+.
T Consensus 222 -~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 -EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1123457899999999999999999999999975
No 191
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-35 Score=312.22 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=200.1
Q ss_pred CccceeeecccceeEEEEE-----ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--cee
Q 003780 501 FDIKYCIGTGGYGSVYKAQ-----LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCM 573 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~-----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 573 (796)
|+..+.||+|+||+||++. ..+++.||+|.+...... ...+.+.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ--QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 3888999999999998864 236889999998765332 2245788999999999999999999998754 467
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999999754 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC-----C-CCchhhhHHHHh
Q 003780 654 LDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS-----S-PSSDQKIMLIDV 724 (796)
Q Consensus 654 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~-----~-~~~~~~~~~~~~ 724 (796)
....... .....++..|+|||...+..++.++||||||+++|||+||..|+....... . ..........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6533221 112235667999999988889999999999999999999999976322100 0 000001111112
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.....+.. ......+.+++.+|++.+|++|||++++++.|+..
T Consensus 237 ~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCP---KNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCC---CCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 2222211111 11234588999999999999999999999999875
No 192
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=298.77 Aligned_cols=264 Identities=23% Similarity=0.375 Sum_probs=205.2
Q ss_pred HHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh--cCCCceeeEEeEEEecc--
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK--IAHRNIVKLYGFCLHKK-- 571 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~-- 571 (796)
....+..+.+.||+|.||.||+|+++ |+.||||++..... +.+.+|.++.+. ++|+||+.+++.-..+.
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE------~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE------RSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc-CCceEEEEecccch------hhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 34567888999999999999999996 89999999975542 356778888775 49999999999876443
Q ss_pred --eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc-----CCCCeEEecCCCCCeEecCCCcEE
Q 003780 572 --CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD-----CMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 572 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
+.+||++|.+.|||+|+|.+. .++....++++..+|.||++||.. ..|.|.|||||+.|||+..++...
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 689999999999999999874 388999999999999999999974 467899999999999999999999
Q ss_pred EeeeccccccCCCCC----CccccccccCccCccccccCCc------CcchhHHHHHHHHHHHHhC----------CCCC
Q 003780 645 VADFGTARLLDSDSS----NRTIVAGTYGYIAPELAYTMVV------TEKCDVYSFGVVALEVLMG----------RHPG 704 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~------~~~~DVwSlGv~l~elltg----------~~p~ 704 (796)
|+|+|+|........ .....+||.+|||||++...-- -..+||||||.|+||+.-. +.||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 999999987655422 2344679999999999865421 1368999999999999762 4677
Q ss_pred cccccCCCCCchhhhHHHHhhcCCCCCccc--hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 705 ELLSSLSSPSSDQKIMLIDVLDSRLSPPVD--RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
++.-+. +...+++..-+-..+++|..+ ....+.+..+.++++.||..+|..|-|+-.+-+.|.+..
T Consensus 437 yd~Vp~---DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 437 YDVVPS---DPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred ccCCCC---CCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 643322 122222322233333333322 223456677899999999999999999999988887764
No 193
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.4e-36 Score=326.72 Aligned_cols=262 Identities=24% Similarity=0.278 Sum_probs=197.3
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----ee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-----CM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 573 (796)
+|++.+.||+|+||.||++.. .+|+.||+|++....... ...+.+.+|+++++.++||||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-VSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-HHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999975 479999999986543222 22467889999999999999999999998776 78
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+. ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 47877776432 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC-CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchhhh--
Q 003780 654 LDSDS-SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQKI-- 719 (796)
Q Consensus 654 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~~~-- 719 (796)
..... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||....... ........
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 54322 122334578899999998764 47889999999999999999999997432110 00000000
Q ss_pred --HHHH-hhcCCCCCcc-c---hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 720 --MLID-VLDSRLSPPV-D---RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 720 --~~~~-~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... .......+.. . .........+.+++.+|++.||++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0000 0011111100 0 00011133577999999999999999999999873
No 194
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-35 Score=317.31 Aligned_cols=267 Identities=24% Similarity=0.379 Sum_probs=207.7
Q ss_pred hcCCccceeeecccceeEEEEEcc--------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++|.+.+.||+|+||.||+|+.. ....+|+|.+...... .....+..|+++++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD--KDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh--HHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 457889999999999999999632 3457999988754332 2245788999999999 6999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
..+..++|+||+++|+|.+++..... ...+++..+.+++.|++.||.|||++ +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 99999999999999999999976421 23488899999999999999999998 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||.++......... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--- 242 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--- 242 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---
Confidence 99999999999999998664322211 11224467999999988889999999999999999999 8888763211
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFE 781 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 781 (796)
. .....+......... ......+.+++.+|++.+|++||++.|+++.|++........|.
T Consensus 243 -----~-~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 302 (314)
T cd05099 243 -----E-ELFKLLREGHRMDKP---SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYL 302 (314)
T ss_pred -----H-HHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCce
Confidence 1 111122221111111 11223477899999999999999999999999887655544443
No 195
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=322.96 Aligned_cols=248 Identities=27% Similarity=0.402 Sum_probs=203.9
Q ss_pred eeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCc
Q 003780 506 CIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGS 584 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gs 584 (796)
++|+|.||+||.|+..+ ...+|||-+...... ..+.+..|+...++++|.|||+++|.+.+++..-+.||.++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr---~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR---EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccch---hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 69999999999998664 567899988655433 24578999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-CCCcEEEeeeccccccCCCCCCccc
Q 003780 585 LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKLEAFVADFGTARLLDSDSSNRTI 663 (796)
Q Consensus 585 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~ 663 (796)
|.++++.......-.+...-.+.+||++||.|||+. .|||||||-+||+++ ..|.+||+|||-++.+..-+.-...
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 999999877655557888888999999999999999 999999999999996 4688999999999988766555666
Q ss_pred cccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH
Q 003780 664 VAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
..||..|||||++..++ |..++|||||||++.||.||++||..... .+..++.--+-+. .|+ .+.+-.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs------pqAAMFkVGmyKv-HP~---iPeels 805 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS------PQAAMFKVGMYKV-HPP---IPEELS 805 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC------hhHhhhhhcceec-CCC---CcHHHH
Confidence 78999999999998664 88899999999999999999999974332 1111221111111 122 223334
Q ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 742 VLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.+...+|.+|+.+||.+||+++++++.-
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 5577899999999999999999999874
No 196
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.6e-36 Score=332.06 Aligned_cols=255 Identities=21% Similarity=0.304 Sum_probs=190.9
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------ 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 570 (796)
..+|++.+.||+|+||.||+|.. .+++.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-------YKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 45799999999999999999975 4689999998864321 345799999999999999999987432
Q ss_pred --ceeeEEEeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEe
Q 003780 571 --KCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVA 646 (796)
Q Consensus 571 --~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~ 646 (796)
...++||||+++ ++.+++... .....+++..+..++.||++||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246789999986 676666432 2234588999999999999999999999 999999999999999765 69999
Q ss_pred eeccccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 647 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
|||+|+.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+...+
T Consensus 214 DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-----~~~~~i~~~~ 287 (440)
T PTZ00036 214 DFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-----DQLVRIIQVL 287 (440)
T ss_pred ccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHh
Confidence 9999987654322 2235689999999988654 6899999999999999999999999743211 0000111100
Q ss_pred c-----------C-----CCCCc----cch-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 726 D-----------S-----RLSPP----VDR-MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 726 ~-----------~-----~~~~~----~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. + ..+.. ... .+.....++.+++.+||+.||.+|||+.|+++|-
T Consensus 288 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp 352 (440)
T PTZ00036 288 GTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP 352 (440)
T ss_pred CCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence 0 0 00000 000 0001224578999999999999999999999884
No 197
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2e-35 Score=312.55 Aligned_cols=257 Identities=28% Similarity=0.421 Sum_probs=203.9
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|++.+.||+|+||.||+|..+ +++.||+|++...... ...+++.+|+.++++++||||+++++++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCH--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 457889999999999999999753 4788999998755432 22467899999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc-------------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE-------------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISS 632 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 632 (796)
..++|+||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 99999999999999999974321 13477888999999999999999998 999999999
Q ss_pred CCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 003780 633 NNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSS 709 (796)
Q Consensus 633 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~ 709 (796)
+||+++.++.++|+|||.+..+...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~- 237 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA- 237 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999998765432211 122335667999999988889999999999999999997 888875321
Q ss_pred CCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 710 LSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.........+....+.. ......+.+++.+|++.||++|||+.|+++.|++
T Consensus 238 -------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 -------HEEVIYYVRDGNVLSCP----DNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -------HHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11222222222221111 1123458899999999999999999999999864
No 198
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-35 Score=311.17 Aligned_cols=251 Identities=31% Similarity=0.455 Sum_probs=205.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||.|++|.||+|... +++.||+|.+...... .....+.+|+++++.++||||+++++++..+...++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE--DEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc--hHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 36888899999999999999754 6899999998765422 22457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.++.....
T Consensus 79 e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred EeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999998754 488999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........+++.|+|||++.+..++.++||||||+++|+|+||+.||..... .... ..+.....+.....
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--------~~~~-~~~~~~~~~~~~~~- 221 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--------MRVL-FLIPKNNPPSLEGN- 221 (274)
T ss_pred ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--------HHHH-HHhhhcCCCCCccc-
Confidence 3333445688899999999988899999999999999999999999873221 1111 11112222221111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|+..||++||++++++++-
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~ 252 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKHK 252 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence 0233478899999999999999999999874
No 199
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.8e-35 Score=305.78 Aligned_cols=248 Identities=26% Similarity=0.407 Sum_probs=199.2
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE-ecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL-HKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||++..+ |+.||+|.+..... .+.+.+|+.++++++|+|++++++++. .+...++|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch-----HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 47889999999999999999765 78899998864432 357889999999999999999999765 456789999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++++... ..+++..+.+++.|++.||+|||++ +++||||||+||++++++.+|++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999876432 3478999999999999999999998 9999999999999999999999999998764332
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.........
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~-- 221 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---------LKDVVPRVEKGYKMDAP-- 221 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC---------HHHHHHHHhcCCCCCCC--
Confidence 2 22335668999999988889999999999999999997 999986321 11111112222111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++|||++++++.|++
T Consensus 222 -~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 -DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1223457899999999999999999999999875
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-35 Score=313.57 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=203.6
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+|++.+.||.|++|.||+|.. .+++.||+|.+....... .+.+.+|+++++.++|||++++++++...+..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK---KELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch---HHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4689999999999999999964 578999999987554332 357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.+. .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999988653 378999999999999999999999 9999999999999999999999999998866544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ............ +... ..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--------~~~~~~~~~~~~-~~~~-~~ 238 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------LRALYLIATNGT-PELQ-NP 238 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCC-cccC-Cc
Confidence 3333345688899999999888899999999999999999999999874221 111111111111 1100 01
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.+++.+||..||++||++.+++++=
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 11223477899999999999999999999873
No 201
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-35 Score=314.38 Aligned_cols=264 Identities=25% Similarity=0.391 Sum_probs=204.7
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeE
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGF 566 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 566 (796)
+.++++..+.++|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++++ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch----HHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 45566667889999999999999999999965 46889999987653322 24678899999999 69999999998
Q ss_pred EE-----ecceeeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 567 CL-----HKKCMFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 567 ~~-----~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
+. .++..++||||+++++|.++++... ....+++..+..++.|+++||.|||+. +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 84 3456899999999999999876432 224578889999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc
Q 003780 641 LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS 715 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~ 715 (796)
+.++|+|||++..............|++.|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----- 235 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----- 235 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-----
Confidence 99999999999876543333334568999999998753 44788999999999999999999998743211
Q ss_pred hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 716 DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....... ....+.... .......+.+++.+|++.||++||++.|++++.
T Consensus 236 ---~~~~~~~-~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 236 ---RALFKIP-RNPPPTLHQ-PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ---HHHhhcc-ccCCCcccC-CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111111 111111000 011123478899999999999999999999875
No 202
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.7e-35 Score=320.88 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=201.1
Q ss_pred hcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 570 (796)
.++|++.+.||+|+||.||+|.. .+++.||||+++..... ...+.+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 45799999999999999999963 35789999999765432 2245788999999999 689999999988654
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCc-------------------------------------------------------
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYE------------------------------------------------------- 594 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 594 (796)
...++||||+++|+|.++++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 467899999999999999865321
Q ss_pred ---------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC--Cccc
Q 003780 595 ---------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS--NRTI 663 (796)
Q Consensus 595 ---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~ 663 (796)
...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12367888899999999999999999 999999999999999999999999999986533221 1122
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
..+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... .......+........... ...
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~ 309 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--------DEEFCRRLKEGTRMRAPDY---TTP 309 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc--------cHHHHHHHhccCCCCCCCC---CCH
Confidence 335678999999988889999999999999999997 8899863211 0111122222111111111 123
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.+.+++..|++.||++||++.|++++|+...
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 4778999999999999999999999998753
No 203
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.1e-36 Score=325.29 Aligned_cols=262 Identities=21% Similarity=0.243 Sum_probs=197.6
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK----- 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 570 (796)
..++|++.+.||+|+||.||++... .++.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-HHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4578999999999999999999654 68999999997654332 2245778899999999999999999988643
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999976 56666643 278888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC----------CCchh--
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS----------PSSDQ-- 717 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~----------~~~~~-- 717 (796)
+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .....
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865432 222335689999999999998899999999999999999999999874321000 00000
Q ss_pred --hhHHHHhhcCCC---------------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 --KIMLIDVLDSRL---------------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 --~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............ .+............+.+++.+|++.||++|||+.|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 000000100000 0000000011123578999999999999999999999983
No 204
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.5e-35 Score=306.78 Aligned_cols=252 Identities=23% Similarity=0.384 Sum_probs=201.8
Q ss_pred CCccceeeecccceeEEEEEccCCcEEEEEEeccccch---hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETE---ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
+|.+.+.||+|+||.||+|...+|+.+|+|.+...... .....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47788999999999999998888999999988754321 122345789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +|+|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997643 378899999999999999999998 999999999999999999999999999876532
Q ss_pred CC------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC-CC
Q 003780 657 DS------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS-RL 729 (796)
Q Consensus 657 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 729 (796)
.. .......|+..|+|||++.+..++.++||||+||++|+|++|+.||..... .......... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~ 226 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR--------LAAMFYIGAHRGL 226 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh--------HHHHHHhhhccCC
Confidence 11 111234588899999999988899999999999999999999999863221 1111111111 11
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+... ......+.+++.+|++.+|++||++.|++++
T Consensus 227 ~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 227 MPRLP---DSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCC---CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11111 1123347789999999999999999999874
No 205
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.2e-35 Score=305.32 Aligned_cols=251 Identities=24% Similarity=0.431 Sum_probs=201.6
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.+|++.+.||+|+||.||++...+++.+|+|.+...... ..++.+|++++++++|||++++++++......++|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 468888999999999999998877889999998755433 2468899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999999987543 2478899999999999999999999 99999999999999999999999999987654322
Q ss_pred CC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 659 SN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 659 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. .....++.+|+|||+..+..++.++||||||+++|||++ |+.||.... ..... +.+...........
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~-~~~~~~~~~~~~~~ 225 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS--------NSEVV-ETINAGFRLYKPRL 225 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHH-HHHhCCCCCCCCCC
Confidence 11 112235678999999998889999999999999999998 999986321 11111 11111111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
....+.+++.+|++.+|++||++.|++++|.
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1234889999999999999999999999873
No 206
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-36 Score=314.01 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=209.4
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV 576 (796)
...|++.+.||.||.+.||++...+.+.||+|++.....+. .....|.+|+..|.+++ |.+||++++|-..++..|+|
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~-qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADN-QTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCH-HHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 35688999999999999999999889999999887666544 34678999999999996 99999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||-+- +|..++.+.... ...| .+..++.|++.|+.++|.+ ||||.||||.|+++-. |.+||+|||+|..+..
T Consensus 439 mE~Gd~-DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECGDI-DLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eecccc-cHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 998654 899999876432 2334 7788999999999999999 9999999999999876 6899999999998876
Q ss_pred CCCC--ccccccccCccCccccccCC-----------cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 657 DSSN--RTIVAGTYGYIAPELAYTMV-----------VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 657 ~~~~--~~~~~gt~~y~aPE~~~~~~-----------~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
+... ....+||+.||+||.+.... +++++||||+||+||+|+.|+.||..... ....+..
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~a 584 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLHA 584 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHHh
Confidence 6443 34567999999999886432 55789999999999999999999984321 2334555
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
+.++.-..++....... +++++++.||..||++||+..|++++-.
T Consensus 585 I~~P~~~Iefp~~~~~~--~li~~mK~CL~rdPkkR~si~eLLqhpF 629 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPEND--ELIDVMKCCLARDPKKRWSIPELLQHPF 629 (677)
T ss_pred hcCCCccccccCCCCch--HHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence 66665544544433222 2889999999999999999999999843
No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.7e-35 Score=306.96 Aligned_cols=255 Identities=28% Similarity=0.418 Sum_probs=202.6
Q ss_pred cCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||.||+|+.. .+..+|+|.+...... ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56888999999999999999753 2347999998754432 22467899999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++++|.+++.+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999997643 3478999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCc---cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDSSNR---TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
....... ....++..|+|||++.+..++.++||||||+++||+++ |+.||..... ........ ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--------~~~~~~~~-~~~~ 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--------QDVIKAIE-EGYR 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--------HHHHHHHh-CCCc
Confidence 5432211 11123567999999998889999999999999999886 9999863221 11111111 1111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.. ......+.+++.+|++.+|++||++.++++.|++.
T Consensus 228 ~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 LPAP---MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCC---CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 1111 11233578999999999999999999999998763
No 208
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-35 Score=312.98 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||++..+ +|+.||+|.+...... ...+.+.+|++++++++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDE--SKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 36888999999999999999765 7899999988754322 22467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++........+++..+..++.|+++||.|||+.+ +|+||||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999999876433345899999999999999999999632 8999999999999999999999999998765332
Q ss_pred CCCccccccccCccCccccccCC------cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
......+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||..... ............... +
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~-~ 228 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY-----ANIFAQLSAIVDGDP-P 228 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch-----hhHHHHHHHHhhcCC-C
Confidence 222345788999999886543 47899999999999999999999863211 111111111222111 1
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. .......+.+++.+|++.+|++||++++++.+-.
T Consensus 229 ~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 229 TL---PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred CC---CcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 11 1123345778999999999999999999998743
No 209
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-37 Score=311.39 Aligned_cols=258 Identities=24% Similarity=0.283 Sum_probs=213.0
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..+.|..-++||+|+||.||-++.+ +|+.||.|++.+.+...........+|..++.+++.+.||.+--.|+.++..++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3467888899999999999999754 699999999988777666656678899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+..|.||+|.-++.+... ..+++..+..++.+|+.||++||.. +||.||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999887754 4589999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
...... ..+||.+|||||++....|+...|.||+||++|||+.|+.||.... .....+.++.+.......
T Consensus 339 ~g~~~~-~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K---------eKvk~eEvdrr~~~~~~e 408 (591)
T KOG0986|consen 339 EGKPIR-GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK---------EKVKREEVDRRTLEDPEE 408 (591)
T ss_pred CCCccc-cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh---------hhhhHHHHHHHHhcchhh
Confidence 544433 3479999999999999999999999999999999999999997332 122222333333222222
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
++.....+...+....|+.||++|- .+++|-+|
T Consensus 409 y~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 409 YSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred cccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 2233334466788889999999996 55666655
No 210
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=308.17 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=213.5
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+-|.+.+.||+|.|++|-.|+ .-.|+.||||++.+.+.++.. ...+.+|++.|+-++|||||+++++.......|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 457778899999999999996 457999999999998876543 457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-cCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL-NSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~Dfg~a~~~~~ 656 (796)
|.-++|+|++++.++.. .+.+....+++.||..|+.|+|.. .+|||||||+||.+ ..-|-+|+.|||++-.+.+
T Consensus 97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999987654 388999999999999999999999 99999999999876 4568999999999987765
Q ss_pred CCCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. ......+|+..|-|||.+.+..|+ +++||||+||+||-|++|+.||+..++ .+.+..++|-....+
T Consensus 172 G-~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND--------SETLTmImDCKYtvP--- 239 (864)
T KOG4717|consen 172 G-KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND--------SETLTMIMDCKYTVP--- 239 (864)
T ss_pred c-chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc--------hhhhhhhhcccccCc---
Confidence 3 445567899999999999998888 578999999999999999999984432 334555555554322
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.-...++.++|..||..||++|.+.+||...-+
T Consensus 240 --shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 240 --SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred --hhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 222345889999999999999999999987743
No 211
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=314.28 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=204.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|++.+.||+|++|.||++.. .+++.||+|.+....... .+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 36799999999999999999975 579999999987654332 35678999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.+. .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999998653 378889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........+++.|+|||...+..++.++|||||||++|+|++|+.||....... ......... .+... .
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~--------~~~~~~~~~-~~~~~-~ 237 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNG-TPELQ-N 237 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch--------heeeeccCC-CCCCC-C
Confidence 4433344568899999999998889999999999999999999999986422110 000001001 11100 0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+.+++.+|++.+|++||++++++++-
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 112223477899999999999999999999973
No 212
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4e-35 Score=305.34 Aligned_cols=249 Identities=29% Similarity=0.458 Sum_probs=202.6
Q ss_pred eeeecccceeEEEEEccC----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 505 YCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.||+|+||.||+|.... +..|++|.+....... ..+.+.+|+++++.++|+||+++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 468999999999997653 8899999998766543 3568899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhhcCc------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 581 KRGSLFCFLRNDYE------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 581 ~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
++++|.+++..... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999987521 24589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCC--CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 655 DSDS--SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 655 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.... .......+++.|+|||.+.+..++.++||||+|+++|||++ |..||.... .......... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~-~~~~ 226 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--------NEEVLEYLRK-GYRL 226 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHc-CCCC
Confidence 5432 12233457889999999988889999999999999999999 699987431 1111112211 1111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... ......+.+++.+|++.+|++||++.|++++|+
T Consensus 227 ~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PKP---EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCC---ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111 112345889999999999999999999999874
No 213
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.6e-35 Score=305.74 Aligned_cols=255 Identities=29% Similarity=0.435 Sum_probs=202.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CC---cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NG---KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|+..+.||+|+||.||+|..+ ++ ..+|+|.+...... ...+.+..|++++++++|||++++.+++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE--KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 46888899999999999999764 23 37999988655322 22467889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999997543 3488999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCCcc---ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDSSNRT---IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
........ ....++.|+|||++.+..++.++|||||||++|||++ |+.||.... ... ....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--------~~~-~~~~i~~~~~ 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--------NHE-VMKAINDGFR 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--------HHH-HHHHHhcCCC
Confidence 43222111 1123457999999988889999999999999999997 999986321 111 1122222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.. ......+.+++.+|++.+|++||++.+|++.|++.
T Consensus 229 ~~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 LPAP---MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 11234578999999999999999999999999764
No 214
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.7e-35 Score=316.10 Aligned_cols=194 Identities=27% Similarity=0.426 Sum_probs=159.9
Q ss_pred ceeeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceeeEEEe
Q 003780 504 KYCIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYK 578 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lV~e 578 (796)
.+.||+|+||+||+|+.+ +++.||+|.+...... ..+.+|++++++++||||+++++++.. +...++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc-----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999754 5688999998754322 356789999999999999999998854 456889999
Q ss_pred eccCCcHHHHHhhcC------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----cCCCcEEEeee
Q 003780 579 YMKRGSLFCFLRNDY------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADF 648 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Df 648 (796)
|+.+ +|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9865 7888775321 123588899999999999999999999 99999999999999 45678999999
Q ss_pred ccccccCCCCC---CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 649 GTARLLDSDSS---NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 649 g~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
|+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987653321 1234568999999999876 4588999999999999999999999863
No 215
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.4e-35 Score=303.84 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=196.1
Q ss_pred eeeecccceeEEEEEcc--C--CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 505 YCIGTGGYGSVYKAQLP--N--GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~--~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.||+|+||.||+|... + +..+|+|.+...... ...+++.+|+++++++.||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 36899999999999643 2 378999999866553 23467899999999999999999999876 45679999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 660 (796)
++|+|.+++.+.. .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999998654 488999999999999999999998 9999999999999999999999999999876443222
Q ss_pred cc---ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 661 RT---IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 661 ~~---~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. ...++..|+|||...+..++.++|||||||++|+|++ |+.||..... . .....+......+..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~-~~~~~~~~~~~~~~~-- 220 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------A-EVIAMLESGERLPRP-- 220 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------H-HHHHHHHcCCcCCCC--
Confidence 11 1123467999999998899999999999999999998 9999863211 1 111122222111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
......+.+++.+|++.+|++||++.++++.|+..
T Consensus 221 -~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 -EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11223578999999999999999999999999875
No 216
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.1e-35 Score=306.44 Aligned_cols=257 Identities=26% Similarity=0.433 Sum_probs=206.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||.|+||+||+|... ++..+|+|++....... ..+.+.+|++.++.++|+||+++++.+..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 46899999999999999999754 68899999987654433 3568999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|++++++|.++++.......+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999998654434589999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCC----ccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 658 SSN----RTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 658 ~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
... .....|+..|+|||++... .++.++|||||||++|+|++|+.||...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~ 227 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--------KVLMLTLQNDPPSL 227 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--------hhHHHHhcCCCCCc
Confidence 222 2334588999999998776 7889999999999999999999998743221 11212222111110
Q ss_pred cchh-hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 733 VDRM-VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 733 ~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .......+.+++.+|++.||++||+++|++++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000 01223457899999999999999999999986
No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.4e-35 Score=310.60 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=201.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|++.+.||+|+||.||+|+.. +++.||+|.+...... ..+.+.+|+++++.++||||+++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE---ELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56889999999999999999765 5899999998754322 2467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|..++.+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 89 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 89 EFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred ecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999988876532 2488999999999999999999998 9999999999999999999999999998765433
Q ss_pred CCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 658 SSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
........+++.|+|||++. ...++.++|||||||++|||++|+.||..... ............. .
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~~~-~ 234 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEPP-T 234 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HHHHHHHhcCCCc-c
Confidence 33334456888999999884 34567899999999999999999999863221 1111122111111 1
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. ........+.+++.+|++.||++||+++|++++-.
T Consensus 235 ~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 235 LS-QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred CC-CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00 01112234778999999999999999999998743
No 218
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-35 Score=313.48 Aligned_cols=262 Identities=24% Similarity=0.301 Sum_probs=202.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||++... ++..+|+|.+...... ...+++.+|++++++++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP--AIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36889999999999999999754 6888999988754322 23457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++++.. .+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999997653 3788999999999999999999732 8999999999999999999999999998765332
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC------C---c-------------
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP------S---S------------- 715 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~------~---~------------- 715 (796)
......|+..|+|||...+..++.++|||||||++|+|++|+.||......... . .
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 123346889999999998888999999999999999999999998532110000 0 0
Q ss_pred -----hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 716 -----DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 716 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.......+.+.....+.... ......+.+++.+|++.||++||+++|++++..-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPS--GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcC--cccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00000000000000000000 0122347899999999999999999999998643
No 219
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.8e-35 Score=305.51 Aligned_cols=254 Identities=25% Similarity=0.430 Sum_probs=203.8
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||++...++..+|+|.+..... ..+.+.+|++++++++|+||+++++++.. ...++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 4568999999999999999999877788899998875432 23578899999999999999999999987 778999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 79 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 99999999999997643 23478889999999999999999998 999999999999999999999999999976543
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....++..|+|||++.+..++.++|||||||++|++++ |+.||..... . .....+......+..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~-~~~~~~~~~~~~~~~ 225 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------P-EVIRALERGYRMPRP 225 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--------H-HHHHHHhCCCCCCCc
Confidence 2211 122335677999999998889999999999999999999 8999863211 1 111111222111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++||++.++.+.|+.
T Consensus 226 ---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ---ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1223458899999999999999999999999875
No 220
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.9e-35 Score=305.38 Aligned_cols=251 Identities=25% Similarity=0.431 Sum_probs=201.4
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh------hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE------TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~------~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
+|.+...||+|++|.||+|.. .+++.||+|.+....... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 467788999999999999975 468899999887654322 1234578899999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++|+||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997653 378888999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc
Q 003780 653 LLDSDSS------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD 726 (796)
Q Consensus 653 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (796)
....... ......|+..|+|||.+.+..++.++||||+||++|+|++|+.||..... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~ 226 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--------LQAIFKIGE 226 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--------HHHHHHHhc
Confidence 7653211 11223578899999999988899999999999999999999999873211 111111111
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...+... ......+.+++.+||+.||++||++.|++++
T Consensus 227 -~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 -NASPEIP---SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -cCCCcCC---cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111111 1223457789999999999999999999874
No 221
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.7e-35 Score=308.68 Aligned_cols=255 Identities=28% Similarity=0.439 Sum_probs=206.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
..|+..+.||+|+||.||+|..+ +++.||+|.+...... ...+.+.+|++++++++||||+++++++..+...++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35777889999999999999764 6889999998754332 22467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++... .+++..+..++.|++.||+|+|+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999998643 378888999999999999999998 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+.....+.. .
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---------~~~~~~~~~~~~~~---~ 222 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---------RVLFLIPKNNPPTL---T 222 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---------hHhhhhhcCCCCCC---c
Confidence 33334456888999999998888999999999999999999999998732211 11111111111111 2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
......+.+++.+|++.+|++||++++++++-.-.+.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 2334558899999999999999999999998554433
No 222
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.7e-35 Score=314.16 Aligned_cols=255 Identities=24% Similarity=0.323 Sum_probs=205.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||+|++|.||+|... +++.||+|.+...........+.+..|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999765 58999999998765544344567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+.+++|.+++.+.. ...+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987542 24588999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 658 SS-----------------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 658 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 0112357889999999998889999999999999999999999986322
Q ss_pred cCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT----MQRVCQE 768 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~ 768 (796)
................... .....+.+++.+|++.||++||+ ++|++.+
T Consensus 237 --------~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 237 --------RDETFSNILKKEVTFPGSP---PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred --------hHHHHHHHhcCCccCCCcc---ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1222233333332222111 12345889999999999999999 6666554
No 223
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=342.94 Aligned_cols=259 Identities=21% Similarity=0.328 Sum_probs=200.4
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cce
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKC 572 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~ 572 (796)
...++|.+.+.||+|+||+||+|... +++.||+|.+....... .....+..|+.++++++|||||++++++.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-REKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 34578999999999999999999754 57889999887654332 234678999999999999999999998854 457
Q ss_pred eeEEEeeccCCcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCC----CCeEEecCCCCCeEecC--------
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCM----PSIVHRDISSNNILLNS-------- 639 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~ivH~dlkp~NIll~~-------- 639 (796)
+++||||+++|+|.+++..... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 8999999999999999976422 2358999999999999999999998521 25999999999999964
Q ss_pred ---------CCcEEEeeeccccccCCCCCCccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 640 ---------KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 640 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM-AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc-ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 23489999999987643322 234569999999999854 457899999999999999999999997322
Q ss_pred cCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
. ...+...+......+.. .....+.+++..||+.+|++||++.|++++
T Consensus 248 ~--------~~qli~~lk~~p~lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 248 N--------FSQLISELKRGPDLPIK----GKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred c--------HHHHHHHHhcCCCCCcC----CCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 1 11112222221111111 112347899999999999999999999965
No 224
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3e-35 Score=321.90 Aligned_cols=262 Identities=21% Similarity=0.236 Sum_probs=197.2
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK----- 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 570 (796)
..++|++.+.||+|+||.||++.. ..++.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-hhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 457899999999999999999975 468899999997654322 2245778899999999999999999987543
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
...++||||+++ +|.+.+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 67666643 277888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchhhh
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQKI 719 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~~~ 719 (796)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .+......
T Consensus 172 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 172 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred CccccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 998654322 2233468999999999999999999999999999999999999997432110 00000000
Q ss_pred ----HHHHhhcCCCC---------------CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 720 ----MLIDVLDSRLS---------------PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 720 ----~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
........+.. +............+.+++.+|++.||++|||+.|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00000000000 000000001123578999999999999999999999983
No 225
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.9e-35 Score=310.00 Aligned_cols=258 Identities=25% Similarity=0.345 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|..+ +|+.||+|++....... ...+.+.+|++++++++|||++++++++..+...++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 46888999999999999999765 68999999987554222 22356789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++++.|..+..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999998888765432 389999999999999999999998 9999999999999999999999999999876554
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc----------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD---------- 726 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 726 (796)
........++..|+|||++.+ ..++.++||||||+++|+|++|+.||...... ...........
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-----DQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCChHHhhhc
Confidence 333334457889999999875 45788999999999999999999998643211 00000000000
Q ss_pred -------CCCCCccc------hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 -------SRLSPPVD------RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 -------~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
....+... .........+.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000 0001123457899999999999999999999875
No 226
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.9e-35 Score=311.88 Aligned_cols=263 Identities=26% Similarity=0.387 Sum_probs=204.8
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeE
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGF 566 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 566 (796)
+++.++..+.++|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV----DEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH----HHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 44556666788999999999999999999975 46899999998654322 34677899999998 79999999999
Q ss_pred EEec-----ceeeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 567 CLHK-----KCMFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 567 ~~~~-----~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
+... +..++|+||+++|+|.++++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8754 35899999999999999886432 223578999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCccccccccCccCccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc
Q 003780 641 LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS 715 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~ 715 (796)
+.+||+|||.+..............|+..|+|||.+... .++.++|||||||++|||++|+.||.....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~------ 238 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP------ 238 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH------
Confidence 999999999998765433333345688999999987543 367899999999999999999999863221
Q ss_pred hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 716 DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.......... ..+.... .......+.+++.+|++.+|++||++.|++++
T Consensus 239 --~~~~~~~~~~-~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 239 --VKTLFKIPRN-PPPTLLH-PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred --HHHHHHHhcC-CCCCCCc-ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1111111111 1111100 11122357899999999999999999999986
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.5e-35 Score=309.74 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=199.5
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|++.+.||+|+||.||+|... ++..+++|.+...... ..+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEE---ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHH---HHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 677888999999999999765 5788899988654322 245788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++++|..++.+.. ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 84 CAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999998876532 3488999999999999999999999 999999999999999999999999999876543333
Q ss_pred CccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 660 NRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
......+++.|+|||++. +..++.++|||||||++|||++|+.||..... .................
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 230 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEPPTLAQ 230 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--------HHHHHHHhhcCCCCCCC
Confidence 333456889999999874 34577899999999999999999999874221 11111111111110000
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+.+++.+||+.||++||++.+++++-.
T Consensus 231 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 231 --PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred --ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 1112235789999999999999999999998754
No 228
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-35 Score=312.94 Aligned_cols=257 Identities=28% Similarity=0.367 Sum_probs=193.0
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc---CCCceeeEEeEEEe-----c
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI---AHRNIVKLYGFCLH-----K 570 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~-----~ 570 (796)
+|++.+.||+|+||+||+|+.+ +++.||+|.+........ ....+.+|+++++++ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG-LPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC-CchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4888999999999999999755 689999999876432221 123455677766655 69999999998864 3
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++|+||+++ +|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 457899999985 88888875432 3488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc----
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD---- 726 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 726 (796)
++...... ......|+..|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.....
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 155 ARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKIFDLIGLPPE 228 (288)
T ss_pred cccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-----HHHHHHHHHHhCCCCh
Confidence 98764322 22334588999999999988899999999999999999999999863211 000001111100
Q ss_pred ---------------CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 ---------------SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ---------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.................+.+++.+|++.||++|||+.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000001111123347799999999999999999999875
No 229
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5e-35 Score=306.26 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=189.5
Q ss_pred eeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 506 CIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.||+|+||.||+|... .+..+|+|.+....... ....+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ--EQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH--HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 5899999999999754 34679999887654332 234788899999999999999999999999999999999999
Q ss_pred CcHHHHHhhcCc--ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC-
Q 003780 583 GSLFCFLRNDYE--AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS- 659 (796)
Q Consensus 583 gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 659 (796)
|+|.++++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999975432 23456778889999999999999999 999999999999999999999999999975433221
Q ss_pred -CccccccccCccCccccccC-------CcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 660 -NRTIVAGTYGYIAPELAYTM-------VVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 660 -~~~~~~gt~~y~aPE~~~~~-------~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||..... .+............
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 229 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD-------EQVLTYTVREQQLK 229 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh-------HHHHHHHhhcccCC
Confidence 11234577889999987642 35789999999999999996 9999863211 11111111111111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.............+.+++..|+ .+|++|||++||.+.|.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111101112234677889998 58999999999998864
No 230
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.7e-35 Score=303.64 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=198.5
Q ss_pred eeeecccceeEEEEEccC--C--cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 505 YCIGTGGYGSVYKAQLPN--G--KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+.+|+.++++++||||+++++++.. ...++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999997543 3 36999999876654 345789999999999999999999999988 8899999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 660 (796)
++|+|.+++.+... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999987543 4589999999999999999999999 9999999999999999999999999999876542211
Q ss_pred ---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 661 ---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 661 ---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ................
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~--- 222 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--------SQILKKIDKEGERLER--- 222 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhcCCcCCC---
Confidence 112346788999999998889999999999999999998 9999863211 1111111111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+.+++.+|++.+|++||+++|+++.|.
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1122345889999999999999999999999875
No 231
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.9e-35 Score=310.91 Aligned_cols=250 Identities=29% Similarity=0.459 Sum_probs=202.3
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||.||+|.. .+++.||+|.+....... ..+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH--HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 466678899999999999965 468899999887554322 24678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++... .+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 83 YLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred ccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999988642 378899999999999999999998 99999999999999999999999999998765433
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......++..|+|||++.+..++.++|||||||++|||++|+.|+...... .....+.....+.. ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---------~~~~~~~~~~~~~~---~~ 223 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM---------RVLFLIPKNSPPTL---EG 223 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh---------hHHhhhhcCCCCCC---Cc
Confidence 3333345888999999999888999999999999999999999998632211 11111111111111 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.+++.+|++.+|++||++.+++++-.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 22345789999999999999999999999754
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8e-35 Score=304.23 Aligned_cols=251 Identities=23% Similarity=0.376 Sum_probs=196.6
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccch--hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETE--ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMF 574 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~ 574 (796)
+|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 688899999999999999975 46899999988654321 22234578899999999999999999999875 35788
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+++||+++++|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++..
T Consensus 83 l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999999997643 378888999999999999999998 9999999999999999999999999999765
Q ss_pred CCCC---CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 655 DSDS---SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 655 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.... .......++..|+|||++.+..++.++||||+||++|||++|+.||..... .............+
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 228 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--------MAAIFKIATQPTNP 228 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--------HHHHHHHhcCCCCC
Confidence 4321 112234588899999999988899999999999999999999999873211 11122222211122
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .....+..++ +|+..+|++||+++||++|
T Consensus 229 ~~~~---~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 229 QLPS---HISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCch---hcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 2111 1122355566 6888999999999999876
No 233
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.9e-35 Score=333.55 Aligned_cols=263 Identities=19% Similarity=0.242 Sum_probs=192.1
Q ss_pred HHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC------CceeeEEeE
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH------RNIVKLYGF 566 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~l~~~ 566 (796)
+....++|++.+.||+|+||+||+|.. ..++.||||+++.... ..+.+..|+++++.++| +++++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 334568899999999999999999975 4688999999964322 12345667777777654 458899998
Q ss_pred EEec-ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCC---
Q 003780 567 CLHK-KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKL--- 641 (796)
Q Consensus 567 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~--- 641 (796)
+..+ +..++|||++ +++|.+++.+.. .+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 8764 5788999987 668888887543 48899999999999999999997 5 999999999999998765
Q ss_pred -------------cEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 642 -------------EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 642 -------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999886432 22334679999999999999999999999999999999999999997432
Q ss_pred cCC----------CCCchh-----hhHHHHhhcC--CCCCccch------------hhHHHHHHHHHHHHHcCCCCCCCC
Q 003780 709 SLS----------SPSSDQ-----KIMLIDVLDS--RLSPPVDR------------MVMQDIVLVTTVALACLHSKPKFR 759 (796)
Q Consensus 709 ~~~----------~~~~~~-----~~~~~~~~~~--~~~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~R 759 (796)
... ...... .......... .+.+.... ...-....+.+|+.+||+.||++|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 110 000000 0000000000 00000000 000112347799999999999999
Q ss_pred CCHHHHHHHHh
Q 003780 760 PTMQRVCQEFL 770 (796)
Q Consensus 760 Ps~~evl~~L~ 770 (796)
||++|+++|-.
T Consensus 430 ~ta~e~L~Hp~ 440 (467)
T PTZ00284 430 LNARQMTTHPY 440 (467)
T ss_pred CCHHHHhcCcc
Confidence 99999999743
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.4e-35 Score=310.62 Aligned_cols=255 Identities=25% Similarity=0.375 Sum_probs=203.3
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||++... +++.||+|.+..... ...+.+..|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE---EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH---HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 356889999999999999999764 689999999865432 2246788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.+.. ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999987643 2488999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 657 DSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.........+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ............ +
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-~ 226 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP--------MRVLLKILKSEP-P 226 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--------HHHHHHHhcCCC-C
Confidence 333334456899999999874 34467799999999999999999999874221 111112211111 1
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.... .......+.+++.+|++.+|++||++.+++++-.
T Consensus 227 ~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 227 TLDQ-PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred CcCC-cccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 1100 1112234778999999999999999999998743
No 235
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.6e-35 Score=312.66 Aligned_cols=259 Identities=20% Similarity=0.266 Sum_probs=198.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|.+........ ...+.+|+.++++++||||+++++++..++..++|+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc--hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 57899999999999999999754 688999999875543221 245778999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++ ++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9997 58988887543 2478889999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC--------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR-------- 728 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 728 (796)
........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||..... ..........+...
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCChhhchhh
Confidence 333333457889999998765 3478899999999999999999999874221 00000000000000
Q ss_pred --------CC-Ccc-----chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 --------LS-PPV-----DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 --------~~-~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. +.. ..........+.+++.+|++.||.+|||++|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00 000 0000111234778999999999999999999998743
No 236
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-35 Score=324.71 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=194.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++||||+++++++..++..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 457999999999999999999765 58889999532 22456899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||++. ++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68888876532 2489999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCC--chhhhHHHHhhcC---CC
Q 003780 657 DSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPS--SDQKIMLIDVLDS---RL 729 (796)
Q Consensus 657 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~---~~ 729 (796)
.... .....||+.|+|||++.+..++.++|||||||++|||++|..|+.......... ......+...... ..
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 3221 223569999999999999999999999999999999999887643221110000 0000011110000 00
Q ss_pred --------------------CCccchh----hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 730 --------------------SPPVDRM----VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 730 --------------------~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+..... .......+.+++.+||+.||.+|||+.|++++
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 00111247789999999999999999999987
No 237
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.8e-35 Score=307.85 Aligned_cols=263 Identities=23% Similarity=0.337 Sum_probs=201.9
Q ss_pred CCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ce
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KC 572 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 572 (796)
.|++.+.||+|+||.||.++. .+++.||+|.+...... ...+.+.+|++++++++||||+++.+++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH--HHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 467889999999999999963 35889999998755432 2346799999999999999999999999875 56
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++++|.+++.+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 889999999999999987543 2478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC------CCCchhhhHHHH
Q 003780 653 LLDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS------SPSSDQKIMLID 723 (796)
Q Consensus 653 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~------~~~~~~~~~~~~ 723 (796)
........ .....++..|+|||+..+..++.++|||||||++|||++++.|+....... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76433221 122446778999999988889999999999999999999887643211100 000000011111
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+......+.. ......+.+++.+|++.+|++||+++++++.+++.
T Consensus 238 ~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKRLPRP---PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCccCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111111111 11234588999999999999999999999999864
No 238
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.8e-35 Score=303.80 Aligned_cols=253 Identities=24% Similarity=0.388 Sum_probs=203.8
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lV 576 (796)
+|++.+.||.|+||.||++.. .+++.||+|.+....... ...+.+..|++++++++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE-KEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 478889999999999999964 478899999987654332 224678899999999999999999998764 4567899
Q ss_pred EeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHh-----hcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 577 YKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLH-----HDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH-----~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
|||+++++|.+++.+.. ....+++..+..++.|++.||+||| +. +++|+||+|+||+++.++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 99999999999987642 2345899999999999999999999 66 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
+..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .....+.+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~ 227 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---------QLQLASKIKEGKF 227 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---------HHHHHHHHhcCCC
Confidence 9877654432344568999999999998889999999999999999999999987321 1112222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.. .......+.+++.+|++.+|++||++++|+++
T Consensus 228 ~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 RRI---PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCC---ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 211 11223457899999999999999999999986
No 239
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.9e-35 Score=310.69 Aligned_cols=259 Identities=25% Similarity=0.341 Sum_probs=203.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||++... +|+.||+|++..... ....+.+.+|+++++.++||||+++++++......++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 56888899999999999999754 689999998875432 223468899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.+.. .+++..+..++.+++.||.|||+.+ +++||||||+||+++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999999987643 3789999999999999999999732 8999999999999999999999999998754322
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc---hhhhHHHHhhcCCCCCccc
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS---DQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 734 (796)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||........... ............... ...
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 234 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP-RLP 234 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC-CCC
Confidence 1 2234689999999999888899999999999999999999999974322100000 001111122211111 110
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+.+++.+|++.||++||+++|++++.
T Consensus 235 --~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 235 --SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 011234578999999999999999999999874
No 240
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.5e-35 Score=315.37 Aligned_cols=260 Identities=24% Similarity=0.380 Sum_probs=204.2
Q ss_pred hcCCccceeeecccceeEEEEEcc--------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
..+|++.+.||+|+||.||+|+.. .+..||+|.+...... ...+++.+|+++++++ +||||+++++++.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH--HHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 357899999999999999999642 1246899988754322 2246889999999999 7999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcC-------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDY-------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
.++..++|+||+++|+|.+++.+.. ....+++..+..++.|+++||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999997532 123578899999999999999999998 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---- 241 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP---- 241 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC----
Confidence 99999999999999998654322111 11224567999999999889999999999999999998 888876321
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.. .....+......... ......+.+++.+|++.+|++||++.|+++.|+....
T Consensus 242 ----~~-~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 242 ----VE-ELFKLLKEGHRMDKP---ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred ----HH-HHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 11 111222222211111 1122357899999999999999999999999987763
No 241
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2e-35 Score=320.68 Aligned_cols=262 Identities=23% Similarity=0.280 Sum_probs=196.1
Q ss_pred HHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec----
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK---- 570 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---- 570 (796)
...++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh-HHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 4567899999999999999999964 578899999987653322 2245677899999999999999999987543
Q ss_pred --ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 571 --KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 571 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
...++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999987 67898877542 388999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchh
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQ 717 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~ 717 (796)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ......
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999865432 233468999999999876 568899999999999999999999986422100 000000
Q ss_pred hh-----HHHHhhcC--CCCC-ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 KI-----MLIDVLDS--RLSP-PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 ~~-----~~~~~~~~--~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. ........ .... ............+.+++.+|++.||++|||+.|+++|-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 00 00000000 0000 00000001122467899999999999999999999883
No 242
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.1e-34 Score=303.79 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=202.5
Q ss_pred CCccceeeecccceeEEEEEccC--CcEEEEEEeccccc-------hhhHHHHHHHHHHHHHhh-cCCCceeeEEeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPN--GKVVALKKLHRAET-------EETTFFNSFQNEAHVLSK-IAHRNIVKLYGFCLH 569 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~ 569 (796)
+|++.+.||+|+||.||+|..+. ++.+|+|.+..... .......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999998654 78899998864321 112234567788888875 789999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
++..++||||+++++|.+++... .....+++..+++++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988542 123458889999999999999999996 5 899999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.... ...........
T Consensus 158 fg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~--------~~~~~~~~~~~ 228 (269)
T cd08528 158 FGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN--------MLSLATKIVEA 228 (269)
T ss_pred ccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC--------HHHHHHHHhhc
Confidence 99998765433 3334568899999999998889999999999999999999999986321 11112222222
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
...+.... .....+.+++.+|++.||++||++.|+..+++
T Consensus 229 ~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VYEPLPEG---MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCcCCcc---cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 22221111 12235789999999999999999999999875
No 243
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-34 Score=300.36 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=198.3
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCc
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGS 584 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gs 584 (796)
+.||+|+||.||++...+++.||+|.+...... .....+.+|++++++++||||+++++++......++|+||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 368999999999998777999999998766543 234678999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC--cc
Q 003780 585 LFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN--RT 662 (796)
Q Consensus 585 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~ 662 (796)
|.+++.+... .+++..+..++.+++.|++|||++ +++||||||+||+++.++.++|+|||.+......... ..
T Consensus 79 l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9999976432 478889999999999999999999 9999999999999999999999999999765422111 11
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
...++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+......... ....
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~---------~~~~~~~~~~~~~~~~---~~~~ 221 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN---------QQTRERIESGYRMPAP---QLCP 221 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH---------HHHHHHHhcCCCCCCC---ccCC
Confidence 2234567999999988889999999999999999999 7888763211 1111222222111111 1123
Q ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 742 VLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..+.+++.+|++.+|++||++.|+++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 45889999999999999999999999885
No 244
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.7e-35 Score=314.29 Aligned_cols=262 Identities=19% Similarity=0.275 Sum_probs=194.0
Q ss_pred cceeeecc--cceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 503 IKYCIGTG--GYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 503 ~~~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
+.++||+| +|++||++.. .+|+.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH-HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45789999 7889999965 579999999997654332 2245778899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++|+|.+++..... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999975432 2378999999999999999999998 999999999999999999999999986543321111
Q ss_pred -------CccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh-----
Q 003780 660 -------NRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL----- 725 (796)
Q Consensus 660 -------~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 725 (796)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112346778999999876 45889999999999999999999999743210000000000000000
Q ss_pred --------------cCC---------CCC-----ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 726 --------------DSR---------LSP-----PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 726 --------------~~~---------~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+.. ..+ ............+.+++.+|++.||++|||++|++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p 308 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 308 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence 000 000 00000111234588999999999999999999999874
No 245
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.2e-35 Score=308.44 Aligned_cols=261 Identities=24% Similarity=0.377 Sum_probs=203.7
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeE
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGF 566 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 566 (796)
.++.++....+.|++.+.||+|+||.||+|.. .+++.+|+|.+...... ...+..|+.++.++ +||||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE----EEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH----HHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 34555666778999999999999999999975 46899999988654322 34678899999998 69999999999
Q ss_pred EEe------cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 567 CLH------KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 567 ~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
+.. ....++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.+
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 853 457899999999999999987543 23477888899999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc
Q 003780 641 LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS 715 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~ 715 (796)
+.++|+|||++..............|++.|+|||.+. ...++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~------ 231 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP------ 231 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH------
Confidence 9999999999876543333333456899999999875 34578899999999999999999999864221
Q ss_pred hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 716 DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
................ .......+.+++.+||+.||.+||++.|++++
T Consensus 232 --~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 232 --MRALFLIPRNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred --HhhhhhHhhCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 1111111111111111 11123458899999999999999999999865
No 246
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1e-34 Score=303.96 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=200.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CC---cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NG---KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
.+|++.+.||+|+||.||+|..+ ++ ..||+|.+...... ...+.+..|+.++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 35788999999999999999764 23 36999998765322 23468999999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999987643 3478999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCCcc---ccc--cccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 655 DSDSSNRT---IVA--GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 655 ~~~~~~~~---~~~--gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
........ ... .+..|+|||++.+..++.++||||+||++|||++ |..||..... . .....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~-~~~~~i~~~ 227 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------Q-DVINAIEQD 227 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------H-HHHHHHHcC
Confidence 43222111 111 2357999999998899999999999999999886 9999863211 1 111111111
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
...+.. ...+..+.+++.+|++.+|.+||+++++++.|+..
T Consensus 228 ~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPP---MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCc---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111 11234578999999999999999999999998753
No 247
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.8e-35 Score=307.95 Aligned_cols=248 Identities=26% Similarity=0.354 Sum_probs=203.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||++... +++.||+|++...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36889999999999999999754 68999999997665444444567899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999997653 488999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ...............+ .
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~--~-- 219 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--------PIQIYEKILEGKVRFP--S-- 219 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCCccCC--c--
Confidence 233468899999999988888899999999999999999999986322 1112222222221111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.....+.+++.+||+.||.+|| +++|++++
T Consensus 220 -~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 220 -FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred -cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 1123477899999999999998 67777655
No 248
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.1e-35 Score=310.80 Aligned_cols=258 Identities=26% Similarity=0.359 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|..+ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 46888999999999999999765 58999999987654332 23457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.++..... .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999988766432 388999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH-------------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID------------- 723 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------------- 723 (796)
........++..|+|||+..+ ..++.++||||||+++|||++|+.||...... ........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-----DQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-----HHHHHHHHHhCCCchhhHHHh
Confidence 333334558889999998875 44778999999999999999999998632210 00000000
Q ss_pred ----hhcCCCCCccc------hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 ----VLDSRLSPPVD------RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 ----~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.......+... .........+.+++.+|++.+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000000 0001123458899999999999999999999875
No 249
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.2e-34 Score=302.47 Aligned_cols=253 Identities=29% Similarity=0.452 Sum_probs=202.8
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||+|.. .+++.||+|.+...... ....+.+..|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 578889999999999999975 47899999998766543 3346789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999997643 378889999999999999999999 99999999999999999999999999998765433
Q ss_pred CCcc----ccccccCccCccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 659 SNRT----IVAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 659 ~~~~----~~~gt~~y~aPE~~~~~~---~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.... ...++..|+|||++.+.. ++.++||||||+++|+|++|+.||..... ......... ....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~~~ 225 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-------EFQIMFHVG-AGHKP 225 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-------hHHHHHHHh-cCCCC
Confidence 2211 245788999999988766 88899999999999999999999873211 111111111 11111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .......+.+++.+|++.+|++||++.|++.+
T Consensus 226 ~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 226 PIPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1111 11113346789999999999999999999864
No 250
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-34 Score=302.31 Aligned_cols=249 Identities=27% Similarity=0.374 Sum_probs=191.0
Q ss_pred eeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE-ecceeeEEEee
Q 003780 505 YCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL-HKKCMFLIYKY 579 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lV~e~ 579 (796)
+.||+|+||.||+|... ++..||+|++...... ...+.+.+|+.+++.++||||+++++++. .++..++|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDL--EEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCH--HHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 36899999999999743 2467999988643322 22467889999999999999999999876 45568899999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+.+|+|.+++.+... ..++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999976432 357778889999999999999998 999999999999999999999999999976543211
Q ss_pred ----CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCC-CCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 660 ----NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGR-HPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 660 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
......+++.|+|||...+..++.++|||||||++|||++|+ .||.... ..... ..+.........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~ 224 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--------SFDIT-VYLLQGRRLLQP 224 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH-HHHhcCCCCCCC
Confidence 112234677899999998888999999999999999999964 5554211 11111 112111111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
. .....+.+++.+||+.+|++||++.|+++.+++.
T Consensus 225 ~---~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 225 E---YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred C---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 1123477999999999999999999999999865
No 251
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-34 Score=303.16 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=194.0
Q ss_pred eeeecccceeEEEEEccC-Cc--EEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEEeec
Q 003780 505 YCIGTGGYGSVYKAQLPN-GK--VVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.||+|+||.||+|..++ +. .+++|.+...... ...+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH--HHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999997653 43 4688888744322 2245788999999999 7999999999999999999999999
Q ss_pred cCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 581 KRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 581 ~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
++|+|.++++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 99999999975421 12478899999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhc
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLD 726 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (796)
||++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... . .....+.
T Consensus 156 fgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~-~~~~~~~ 225 (270)
T cd05047 156 FGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------A-ELYEKLP 225 (270)
T ss_pred CCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------H-HHHHHHh
Confidence 9998632211 11112234567999999988889999999999999999997 9999863211 1 1111222
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 727 SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 727 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.....+... .....+.+++.+|++.+|.+|||+.|+++.|++.
T Consensus 226 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 226 QGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCCCCCCCC---cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 221111111 1223477999999999999999999999999764
No 252
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.2e-34 Score=301.97 Aligned_cols=240 Identities=22% Similarity=0.326 Sum_probs=186.8
Q ss_pred eeeecccceeEEEEEccC-------------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 505 YCIGTGGYGSVYKAQLPN-------------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
+.||+|+||.||+|...+ ...|++|.+..... .....+.+|+.+++.++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999997432 23588888765432 22457888999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc-------EE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE-------AF 644 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~-------~k 644 (796)
..++||||+++|+|..++++.. ..+++..+.+++.||++||+|||+. +|+||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999998887543 2488999999999999999999999 9999999999999987654 89
Q ss_pred EeeeccccccCCCCCCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHH-hCCCCCcccccCCCCCchhhhHHH
Q 003780 645 VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVL-MGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+..... .. ..
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~---~~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL------AE---KE 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch------hH---HH
Confidence 9999998754322 2245788899999886 466889999999999999998 58888753211 11 11
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......... ......+.+++.+||+.||++||++.+++++++
T Consensus 220 ~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLV-----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCC-----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1111111110 111234789999999999999999999998863
No 253
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3e-35 Score=311.60 Aligned_cols=249 Identities=25% Similarity=0.352 Sum_probs=199.1
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|.....||+|+||.||++.. .+++.||||.+...... ..+.+.+|+.++++++||||+++++.+..++..++|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHH---HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 344456799999999999975 46899999998654322 24578899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 100 FLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999999988543 378899999999999999999999 99999999999999999999999999997654433
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......|+..|+|||...+..++.++||||||+++|||++|+.||..... ................. ..
T Consensus 173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~-----~~ 242 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-----LQAMRRIRDNLPPRVKD-----SH 242 (292)
T ss_pred ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcCCCcccc-----cc
Confidence 333445688999999999888899999999999999999999999863211 11111111111111111 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|+..||.+|||++|++++
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 122347789999999999999999999987
No 254
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.7e-35 Score=323.73 Aligned_cols=256 Identities=25% Similarity=0.309 Sum_probs=197.4
Q ss_pred hcCCccceeeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
..+|.+.+.||+|+||.||++... .++.||+|.+.... ...+|++++++++||||+++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 457999999999999999999643 46789999876432 3467999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+|||++. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++..
T Consensus 163 lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999986 5888888433 3489999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH---------
Q 003780 655 DSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID--------- 723 (796)
Q Consensus 655 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 723 (796)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...-..+..
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS--SSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc--HHHHHHHHHHhccCcccc
Confidence 543221 2235699999999999998999999999999999999999999864322100 000000000
Q ss_pred -------------hhcCCCCCccc--hh--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 724 -------------VLDSRLSPPVD--RM--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 724 -------------~~~~~~~~~~~--~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+... .. .......+.+++.+|++.||++||++.|++.+-.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 00001111000 00 0011234778999999999999999999999843
No 255
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-34 Score=299.83 Aligned_cols=251 Identities=24% Similarity=0.409 Sum_probs=202.6
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|+..+.||+|++|.||++.. .+++.+|+|.+........ ..+.+.+|++++++++||||+++++.+..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKD-ERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccH-HHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 478899999999999999965 4688999999976543332 35688999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 657 (796)
|+++++|.+++.... ...+++..+.+++.++++|++|||++ +++|+||+|+||+++.++ .++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999997643 23478999999999999999999999 999999999999998654 5799999999876543
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+.... .............+...
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (256)
T cd08220 156 SK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--------PALVLKIMSGTFAPISD--- 223 (256)
T ss_pred cc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--------HHHHHHHHhcCCCCCCC---
Confidence 22 2234588899999999988889999999999999999999999863211 11222222222211111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++|||+.|++++
T Consensus 224 -~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 224 -RYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 122347799999999999999999999976
No 256
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-36 Score=318.33 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=198.7
Q ss_pred cceeeecccceeEEEEEcc-CCcEEEEEEecccc-chhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce--eeEEEe
Q 003780 503 IKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAE-TEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC--MFLIYK 578 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lV~e 578 (796)
...+||+|+|-+||+|... +|-.||=-.++... .......+.|..|+++++.|+||||+++++++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3567999999999999653 56666532222111 1122235789999999999999999999999987654 778999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~ 657 (796)
.+..|+|..|.++.+. .+.....+|++||++||.|||++ .|+|+|||||.+||||+.+ |.|||+|+|+|+.+...
T Consensus 124 L~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999998754 78889999999999999999997 6799999999999999875 89999999999987543
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc-cchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP-VDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 736 (796)
+...+.|||.|||||+.. ..|++.+||||||+.++||+|+.+||. .......+...+.+.+.|. +..
T Consensus 200 --~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs--------EC~n~AQIYKKV~SGiKP~sl~k- 267 (632)
T KOG0584|consen 200 --HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS--------ECTNPAQIYKKVTSGIKPAALSK- 267 (632)
T ss_pred --ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh--------hhCCHHHHHHHHHcCCCHHHhhc-
Confidence 333478999999999876 779999999999999999999999975 2333444444445554433 222
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
-..+++.++|.+|+.. ..+|||+.|++.+-
T Consensus 268 --V~dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 268 --VKDPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred --cCCHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 2245688999999999 99999999999873
No 257
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.3e-34 Score=305.75 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=206.1
Q ss_pred cCCccceeeecccceeEEEEEcc-----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cc
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KK 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~ 571 (796)
++|++.+.||+|+||.||+|... +++.||||.+...... ...+.+.+|++++++++||||+++++++.. +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 46778899999999999999743 4789999999866543 235689999999999999999999999987 55
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 78999999999999999986532 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC------CchhhhHHH
Q 003780 652 RLLDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP------SSDQKIMLI 722 (796)
Q Consensus 652 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~------~~~~~~~~~ 722 (796)
......... .....++..|+|||...+..++.++||||||+++|||++|+.|+......... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 876532211 11123456799999998888999999999999999999999997642211000 000111122
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
+.+......... ......+.+++.+|++.+|++||+|.||+++|+..
T Consensus 237 ~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRP---PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCC---ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 222222221111 11224588999999999999999999999999865
No 258
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=313.34 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=203.6
Q ss_pred CccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|+-.+.||.|+||.||-|+ .++.+.||||++.-.......-++++..|+..+++++|||++.+-|+|..+...++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445779999999999996 457899999999876655555578999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
|-| +-.+++.-.+ .++.+.++..|+.+.++||+|||+. +.||||||+-|||+++.|.||++|||.|..+.+..
T Consensus 108 ClG-SAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn- 180 (948)
T KOG0577|consen 108 CLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN- 180 (948)
T ss_pred Hhc-cHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh-
Confidence 975 6666665433 2488889999999999999999999 99999999999999999999999999998776532
Q ss_pred CccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 660 NRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.++|||.|||||++. .+.|+-|+||||+|++..||...++|.-.++. .-.+..+.... +|....
T Consensus 181 ---sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--------MSALYHIAQNe-sPtLqs- 247 (948)
T KOG0577|consen 181 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNE-SPTLQS- 247 (948)
T ss_pred ---cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--------HHHHHHHHhcC-CCCCCC-
Confidence 367999999999876 57899999999999999999999999542221 11122222111 111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.+-...++.++..||+.-|.+|||.+++++|-.....
T Consensus 248 -~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 248 -NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred -chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 1112348899999999999999999999999665543
No 259
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.4e-34 Score=300.69 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=201.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccch--hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETE--ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
+|+..+.||+|++|.||+|..+ +++.|++|.+...... .....+.+.+|++++++++||||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999765 7999999998654322 123356889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+++++|.+++.+.. .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997653 378899999999999999999999 999999999999999999999999999886543
Q ss_pred CCCCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.... ..............+...
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~- 224 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE--------GVAAVFKIGRSKELPPIP- 224 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc--------HHHHHHHHHhcccCCCcC-
Confidence 32 223456888999999987766 8899999999999999999999987322 111111111101111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|++.+|++||++.+++++
T Consensus 225 --~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 225 --DHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred --CCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1122347789999999999999999999875
No 260
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.3e-34 Score=311.03 Aligned_cols=193 Identities=27% Similarity=0.426 Sum_probs=158.7
Q ss_pred eeeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceeeEEEee
Q 003780 505 YCIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMFLIYKY 579 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lV~e~ 579 (796)
..||+|+||.||+|+.+ +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++|+||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 57999999999999754 457899999875432 2357789999999999999999999854 5678999999
Q ss_pred ccCCcHHHHHhhc------CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----cCCCcEEEeeec
Q 003780 580 MKRGSLFCFLRND------YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFG 649 (796)
Q Consensus 580 ~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg 649 (796)
+++ +|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 875 777776532 1223578899999999999999999999 99999999999999 566789999999
Q ss_pred cccccCCCCC---CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 650 TARLLDSDSS---NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 650 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
+++....... ......||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9987654322 1223468999999999876 4578999999999999999999999863
No 261
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.6e-34 Score=306.25 Aligned_cols=258 Identities=24% Similarity=0.334 Sum_probs=196.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|..+ +++.||+|.+........ ...+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA--PFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC--chhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 57899999999999999999765 689999999876543221 235678999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++ +|.+++.+... .+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 83 EYLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred ecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99985 89998876432 478999999999999999999999 9999999999999999999999999998754332
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC--------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR-------- 728 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 728 (796)
........++..|+|||++.+ ..++.++||||+|+++|+|++|+.||...... ........+.+...
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV----EDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHhcCCCChhhhhhh
Confidence 222223346788999998865 45788999999999999999999998643210 00000000000000
Q ss_pred ----------CC----Cccchh--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 729 ----------LS----PPVDRM--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 729 ----------~~----~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.. ...... .......+.+++.+|++.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 000000 00011456789999999999999999999865
No 262
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.4e-34 Score=300.14 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=208.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|+.+ +++.|++|++...... ...+.+.+|++++.+++|||++++++++..++..++|+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 36888999999999999999765 5999999998766542 23568999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 79 EYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999765 348999999999999999999999 8 999999999999999999999999999987655
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........++..|+|||...+..++.++||||||+++|+|++|+.||..... ............... +.....
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~ 226 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGPP-PSLPAE 226 (264)
T ss_pred CCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCCC-CCCCcc
Confidence 44333345688899999999988899999999999999999999999874332 011112222222221 111110
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++||++.|++++
T Consensus 227 --~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 227 --EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 023458899999999999999999999986
No 263
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.4e-35 Score=306.76 Aligned_cols=255 Identities=25% Similarity=0.355 Sum_probs=204.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|+..+.||+|++|.||++..+ +++.+|+|++...... ...+++.+|++++++++||||+++++++..+...++|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36778889999999999999765 6899999998766433 23467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
||+++++|.+++.... ..+++..+.+++.|+++|++|+|+ . +++|+||||+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 79 EYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 9999999999998653 347889999999999999999999 7 999999999999999999999999999876543
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.... ...++..|+|||...+..++.++||||+|+++|+|++|+.||...... ............... .+....
T Consensus 154 ~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~- 226 (265)
T cd06605 154 SLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEP-PPRLPS- 226 (265)
T ss_pred HHhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcCC-CCCCCh-
Confidence 2211 156888999999999889999999999999999999999998743211 011111111122111 111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|+..||++|||+.|++.+
T Consensus 227 -~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 227 -GKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred -hhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0123447899999999999999999999876
No 264
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5e-35 Score=308.91 Aligned_cols=258 Identities=23% Similarity=0.315 Sum_probs=196.2
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||+|+.+ +|+.||+|++....... .....+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc-cCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4788899999999999999764 68999999987543222 223467789999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++ +|.+++.... ..+++..+..++.||++||.|||+. +|+||||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCDQ-DLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 9975 7877776532 2489999999999999999999999 99999999999999999999999999998665433
Q ss_pred CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH--------------
Q 003780 659 SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID-------------- 723 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-------------- 723 (796)
.......+++.|+|||++.+. .++.++||||+||++|+|+||+.|+...... ......+..
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH----HHHHHHHHHHhCCCChHHhHHhh
Confidence 333334578899999988764 4688999999999999999999996421110 000000000
Q ss_pred -hhcCCCCCccch------hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 -VLDSRLSPPVDR------MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 -~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..+....+.... ........+.+++.+||+.||.+|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000000000000 001112357789999999999999999999875
No 265
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.5e-34 Score=300.29 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=198.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccch--hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--cee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETE--ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 573 (796)
.+|++.+.||+|+||.||+|..+ +|+.||+|.+...... .....+.+.+|+.++++++||||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46889999999999999999754 6899999988643221 122346788999999999999999999998764 467
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++++|.+++.+.. .+++....+++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 378888899999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDS---SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
..... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~ 227 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE--------AMAAIFKIATQPTN 227 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc--------hHHHHHHHhcCCCC
Confidence 54211 11223458889999999988888999999999999999999999986321 11112222211111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.. +......+.+++.+|+. +|++||+++|++++
T Consensus 228 ~~~---~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 228 PVL---PPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCC---chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111 12223457788899985 89999999999876
No 266
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.5e-34 Score=302.79 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=186.2
Q ss_pred eeecccceeEEEEEccC---CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 506 CIGTGGYGSVYKAQLPN---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.||+|+||.||+|...+ ...+|+|.+...... .....+.+|++.++.++||||+++++++......++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATP--DEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCCh--HHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996433 457888887654322 2245788999999999999999999999999999999999999
Q ss_pred CcHHHHHhhcCcc--cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC-
Q 003780 583 GSLFCFLRNDYEA--VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS- 659 (796)
Q Consensus 583 gsL~~~l~~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 659 (796)
|+|.+++...... ...++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 9999999765321 2346778889999999999999999 999999999999999999999999999875432211
Q ss_pred -CccccccccCccCccccc-------cCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCC-C
Q 003780 660 -NRTIVAGTYGYIAPELAY-------TMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSR-L 729 (796)
Q Consensus 660 -~~~~~~gt~~y~aPE~~~-------~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 729 (796)
......+++.|+|||+.. ...++.++|||||||++|||++ |..||.... ............ .
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~~~~ 228 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS--------DEQVLKQVVREQDI 228 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC--------HHHHHHHHhhccCc
Confidence 112234567899999864 3356789999999999999999 778876321 111111111111 1
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..............+.+++..|+ .||++||+++||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11111111122234567888888 5999999999999886
No 267
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.8e-35 Score=305.69 Aligned_cols=255 Identities=28% Similarity=0.426 Sum_probs=201.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecc---
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKK--- 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~--- 571 (796)
.+++|++.+.||+|++|.||+|..+ +++.+++|++...... .+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE----EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchh----HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4678999999999999999999764 6889999998765432 35789999999999 6999999999997644
Q ss_pred ---eeeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 572 ---CMFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 572 ---~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
..++||||+++++|.+++.... ....+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999987532 234588999999999999999999999 999999999999999999999999
Q ss_pred eccccccCCCCCCccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
||.+..............|+..|+|||++.. ..++.++|||||||++|+|++|+.||..... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~ 228 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP--------MRALF 228 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch--------HHHHH
Confidence 9999766543333344568899999998753 3467889999999999999999999863211 11111
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..... ..+.... .......+.+++.+|+..||++|||+.|++++
T Consensus 229 ~~~~~-~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 229 KIPRN-PPPTLKS-PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred Hhhcc-CCCCCCc-hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22111 1111111 11123357899999999999999999999875
No 268
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.1e-34 Score=302.55 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=203.0
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
++|+..+.||+|+||.||+|+.+ +.+.|++|.+...... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE--NLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch--HHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 57888999999999999999754 3567999988654432 234678999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcc------cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEA------VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
.++||||+++|+|.++++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 2589999999999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCC-CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHh
Q 003780 647 DFGTARLLDSDS-SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 647 Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--------~~~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--------EEVLNRL 231 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--------HHHHHHH
Confidence 999987543221 11223346778999999988888999999999999999998 7888863211 1122222
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
........... .....+.+++.+|++.+|++||++.|+++.|.
T Consensus 232 ~~~~~~~~~~~---~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGKLELPVPE---GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCCcCCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 21222111111 12235889999999999999999999999885
No 269
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=310.98 Aligned_cols=257 Identities=27% Similarity=0.403 Sum_probs=212.5
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+....+.||-|.||.||.|.++ ..-.||||.++.+... ..+|..|+.+|+.++|||+|+++|+|..+..+|||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh----HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 445677889999999999999876 4678999999877654 57899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+|||.+|+|.+|+++.. +..++....++++.||+.|++||..+ ++|||||.++|+|+.++..+||+|||+++++..
T Consensus 342 TEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred EecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 99999999999998764 34577778899999999999999999 999999999999999999999999999999987
Q ss_pred CCCCccc-cccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSNRTI-VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
+.+.... ..-...|.|||-+.-..++.|+|||+|||+|||+.| |-.||...+ .-.+.+.+.+..+-...
T Consensus 418 DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid---------lSqVY~LLEkgyRM~~P 488 (1157)
T KOG4278|consen 418 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID---------LSQVYGLLEKGYRMDGP 488 (1157)
T ss_pred CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc---------HHHHHHHHhccccccCC
Confidence 6543211 113567999999988889999999999999999997 556654221 22334444454443322
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
...+..+.+++..||+..|.+||+++|+-+.++....
T Consensus 489 ---eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 489 ---EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ---CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 2334558899999999999999999999999987643
No 270
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-34 Score=299.47 Aligned_cols=247 Identities=27% Similarity=0.435 Sum_probs=198.5
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
++|++.+.||+|+||.||++.. +++.||+|.+..... .+.+.+|+.++++++|||++++++++..+ ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT-----AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch-----HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 4688999999999999999975 578899999865432 24788999999999999999999998765 4789999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 999999999997643 23478999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||..... ......+.........
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~--- 219 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL---------KEVKECVEKGYRMEPP--- 219 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH---------HHHHHHHhCCCCCCCC---
Confidence 112234567999999988889999999999999999997 9999863211 1112222222222211
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......+.+++.+|++.+|++||+++++++.|+.
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1223457899999999999999999999998864
No 271
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-34 Score=307.40 Aligned_cols=256 Identities=22% Similarity=0.264 Sum_probs=199.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||++..+ .++.||+|.+...........+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999754 57899999987664433333567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997643 378899999999999999999998 9999999999999999999999999998642110
Q ss_pred C---------------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 658 S---------------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 658 ~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
. .......++..|+|||.+.+..++.++|||||||++|||++|+.||.... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~--------~~~~~~ 226 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT--------PEELFG 226 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence 0 01112357889999999988889999999999999999999999986321 112222
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
............. ......+.+++.+|++.||++||++.++.+.++
T Consensus 227 ~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 227 QVISDDIEWPEGD--EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHhcccCCCCcc--ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 2222211111110 012234789999999999999998655544443
No 272
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.3e-34 Score=300.90 Aligned_cols=252 Identities=22% Similarity=0.357 Sum_probs=203.4
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||++..+ +|..+|+|.+........ ..+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK-EKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccch-hhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4788899999999999999765 688999999876533222 24578899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 657 (796)
|+++++|.+++.+... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++ .++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999999976432 3478999999999999999999998 999999999999999886 4699999999876544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........|++.|+|||+..+..++.++||||||+++|||++|+.||.... ..............+...
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~--- 224 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKICQGYFAPISP--- 224 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcccCCCCCC---
Confidence 333334568899999999988889999999999999999999999986321 112222222222221111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++|||+.|++++
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 225 -NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 122347899999999999999999999876
No 273
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.9e-34 Score=302.36 Aligned_cols=255 Identities=25% Similarity=0.422 Sum_probs=199.5
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccch-------hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETE-------ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
+|...+.||+|+||.||+|.. .+|+.||+|.+...... .....+.+..|+.++++++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999965 46899999988643221 1112456888999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|+||+++++|.+++.+.. .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999997653 488899999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCC--CccccccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 652 RLLDSDSS--NRTIVAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 652 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
+....... ......|+..|+|||.+.... ++.++||||+|+++|+|++|+.||..... .....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~ 227 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--------IAAMFKLGNK 227 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--------HHHHHHhhcc
Confidence 76543211 122345788999999987654 78899999999999999999999863211 1111111111
Q ss_pred CCCCcc-chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 RLSPPV-DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 ~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...... ..........+.+++.+|++.||++||++++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111111 11111223458889999999999999999999986
No 274
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.8e-34 Score=300.98 Aligned_cols=249 Identities=30% Similarity=0.456 Sum_probs=202.5
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
-|+..+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|+..+++++||||+++++++..++..++|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 477888999999999999965 47899999988654332 234678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 83 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999998643 378999999999999999999998 99999999999999999999999999987665433
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......++..|+|||...+..++.++|||||||++|+|++|..||..... .... ..+.....+... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~-~~~~~~~~~~~~---~ 223 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVL-FLIPKNNPPTLE---G 223 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHH-HHHhcCCCCCCC---c
Confidence 333345688899999999888889999999999999999999999863211 1111 111111111111 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++||++++++++-
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 2234477899999999999999999999973
No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.4e-34 Score=302.68 Aligned_cols=255 Identities=23% Similarity=0.423 Sum_probs=202.3
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh---hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE---TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
+|+..+.||+|++|.||++.. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999964 578999999987544221 2235688999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeecccccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTARLL 654 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~ 654 (796)
|+||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997643 478899999999999999999999 999999999999998776 5899999999776
Q ss_pred CCCCC----CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDSS----NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~ 229 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH-----SNHLALIFKIASATTA 229 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----cchHHHHHHHhccCCC
Confidence 53311 12234578899999999888899999999999999999999999863221 1111111111111111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+... ......+.+++.+|++.+|++||++.|++++
T Consensus 230 ~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 230 PSIP---EHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCc---hhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 2211 1223457889999999999999999999865
No 276
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3e-34 Score=302.13 Aligned_cols=256 Identities=27% Similarity=0.437 Sum_probs=202.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.+|++.+.||+|+||.||+|..+ +|+ .+|+|.+...... .....+.+|+.++++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP--KANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 56888999999999999999754 333 5899988766432 224578899999999999999999999987 788
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+++|+|.+++.+... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999999986433 388999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCcc--ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSSNRT--IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
......... ...++..|+|||.+....++.++||||||+++||+++ |+.||+.... . .....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~-~~~~~~~~~~~ 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------V-EIPDLLEKGER 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------H-HHHHHHhCCCC
Confidence 653322111 1223567999999988889999999999999999998 9999873211 1 11222222211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
..... .....+.+++.+||..||.+||++.++++.|++...
T Consensus 230 ~~~~~---~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 LPQPP---ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11111 122347789999999999999999999999988643
No 277
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.6e-35 Score=309.24 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=198.7
Q ss_pred ccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 502 DIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+....||+|+||.||+|... +++.||+|.+....... .+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR---RELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch---HHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 33457999999999999754 68999999986543322 356889999999999999999999999999999999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN 660 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 660 (796)
++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.........
T Consensus 101 ~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 101 QGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred CCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence 999999887542 378999999999999999999999 9999999999999999999999999999765544333
Q ss_pred ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHH
Q 003780 661 RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQD 740 (796)
Q Consensus 661 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (796)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+.....+.... ....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~-~~~~~~~~~~~~~-~~~~ 243 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--------VQAM-KRLRDSPPPKLKN-AHKI 243 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHH-HHHhccCCCCccc-cCCC
Confidence 3445689999999999988899999999999999999999999863211 1111 1111111111110 1112
Q ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 741 IVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 741 ~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...+.+++.+|++.+|++||++++++++-
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 23477899999999999999999999974
No 278
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.3e-34 Score=300.25 Aligned_cols=255 Identities=25% Similarity=0.375 Sum_probs=200.3
Q ss_pred cCCccceeeecccceeEEEEEccC----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|.+.+.||+|+||.||+|...+ ...||+|........ ...+.+.+|+.++++++||||+++++++.. +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP--SVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 468888999999999999997543 346899988755432 224678999999999999999999999875 4578
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999999976432 479999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 655 DSDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 655 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... .....++..|+|||.+....++.++||||||+++|||++ |+.||..... ....... .......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~-~~~~~~~ 228 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--------NDVIGRI-ENGERLP 228 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHH-HcCCcCC
Confidence 443221 122234568999999988889999999999999999996 9999863221 1111111 1111111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.. ......+.+++.+|+..+|++|||+.++++.|+...
T Consensus 229 ~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 229 MP---PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 112235889999999999999999999999998754
No 279
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-35 Score=332.76 Aligned_cols=254 Identities=25% Similarity=0.427 Sum_probs=198.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe------
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------ 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------ 569 (796)
...+|+..+.||+||||.||+++.+ ||+.||||++.... . ....+.+.+|+..+++++|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s-~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S-DKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-H-HHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 4567888899999999999999877 89999999998876 2 3346789999999999999999999763210
Q ss_pred --------------------------------------------------------------------------------
Q 003780 570 -------------------------------------------------------------------------------- 569 (796)
Q Consensus 570 -------------------------------------------------------------------------------- 569 (796)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------c--------ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHH
Q 003780 570 -------------------------K--------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY 616 (796)
Q Consensus 570 -------------------------~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~ 616 (796)
+ -..||-||||+...+.++++++.-.. .....++++++|++||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 0 12467799999988888887654211 466788999999999999
Q ss_pred HhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC------------------CCCCCccccccccCccCcccccc
Q 003780 617 LHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD------------------SDSSNRTIVAGTYGYIAPELAYT 678 (796)
Q Consensus 617 LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~ 678 (796)
+|++ |||||||||.||+++++..|||+|||+|+... .+....+..+||..|+|||++.+
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9999 99999999999999999999999999998721 01123455679999999999876
Q ss_pred CC---cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCC
Q 003780 679 MV---VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSK 755 (796)
Q Consensus 679 ~~---~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 755 (796)
.. |+.|+|+||+|||++||+. ||.. ..++...+...-+..++.+ .+...+....-.++|.+|++.|
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T-------sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGT-------SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCc-------hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCC
Confidence 54 9999999999999999995 5541 2333334444444444433 3333344444568999999999
Q ss_pred CCCCCCHHHHHHH
Q 003780 756 PKFRPTMQRVCQE 768 (796)
Q Consensus 756 P~~RPs~~evl~~ 768 (796)
|.+|||+.|++..
T Consensus 859 P~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 859 PSKRPTATELLNS 871 (1351)
T ss_pred CccCCCHHHHhhc
Confidence 9999999999875
No 280
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.3e-34 Score=306.09 Aligned_cols=258 Identities=26% Similarity=0.330 Sum_probs=200.3
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccch--hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETE--ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
+|++.+.||+|++|.||+|..+ +|+.||+|.+...... .......+..|++++++++||||+++++++..++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999754 6899999999766543 122234677899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+ +|+|.+++.+.. ..+++..+..++.||++||+|||+. +|+|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997643 2589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc---------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD--------- 726 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 726 (796)
.........+++.|+|||.+.+ ..++.++|||||||++|||++|..||...... ...........
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-----DQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-----HHHHHHHHHcCCCchhhhhh
Confidence 4333333456788999998854 45788999999999999999998777632211 00000000000
Q ss_pred ---------CCCCC--ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 ---------SRLSP--PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ---------~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
....+ ............+.+++.+|++.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 0000011123457899999999999999999999997
No 281
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-34 Score=314.94 Aligned_cols=192 Identities=23% Similarity=0.330 Sum_probs=164.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
...+|++.+.||+|+||.||+|..+ +++.||+|..... ....|+.++++++||||+++++++...+..++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 3457999999999999999999765 5788999974322 23468999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+|++. ++|.+++.... ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 135 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999995 58888886533 3488999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPG 704 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~ 704 (796)
.. .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 22 2223356899999999999999999999999999999999866554
No 282
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-34 Score=305.99 Aligned_cols=258 Identities=24% Similarity=0.321 Sum_probs=197.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|+..+.||.|++|.||+|+.+ +|+.||||++....... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788999999999999999754 68999999987554322 123578899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+. ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 58988887543 24588999999999999999999998 99999999999999999999999999988665433
Q ss_pred CCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc-----------
Q 003780 659 SNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD----------- 726 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 726 (796)
.......+++.|+|||+..+.. ++.++|||||||++|||+||+.||...... ...........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-----DQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHHhCCCChhhhhhhh
Confidence 3333345788999999877644 578999999999999999999998632110 00000000000
Q ss_pred ----------CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 ----------SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.................+.+++.+|++.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000001112346789999999999999999999875
No 283
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-34 Score=301.94 Aligned_cols=260 Identities=26% Similarity=0.302 Sum_probs=201.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 575 (796)
++|+..+.||.|++|.||++..+ +++.+|+|.+...... ....++.+|++++++++||||+++++++... +..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 36888899999999999999764 6899999998755432 2346789999999999999999999998653 47899
Q ss_pred EEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 576 IYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
||||+++++|.+++.... ....++...+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999998876432 234478889999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....++..|+|||...+..++.++||||+||++|+|++|+.||+..... ................ +...
T Consensus 156 ~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~-~~~~ 229 (287)
T cd06621 156 VNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP---PLGPIELLSYIVNMPN-PELK 229 (287)
T ss_pred cccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC---CCChHHHHHHHhcCCc-hhhc
Confidence 4322 12345788999999999888999999999999999999999998744221 0111111111111111 1110
Q ss_pred hh---hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RM---VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. .......+.+++.+|++.+|++|||+.|++++-
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 230 DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 00 011234578999999999999999999999974
No 284
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.4e-34 Score=299.30 Aligned_cols=238 Identities=27% Similarity=0.417 Sum_probs=188.2
Q ss_pred eeeecccceeEEEEEccCCc-----------EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 505 YCIGTGGYGSVYKAQLPNGK-----------VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
+.||+|+||.||+|..++.. .+++|.+...... ...+.+|+.++++++||||+++++++.. +..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999775432 5777876544322 4578899999999999999999999988 778
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-------cEEEe
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-------EAFVA 646 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-------~~kl~ 646 (796)
++|+||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999999986542 488999999999999999999998 999999999999999887 79999
Q ss_pred eeccccccCCCCCCccccccccCccCccccccC--CcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHH
Q 003780 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 647 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|||++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..|+..... ........
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~------~~~~~~~~ 220 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS------SEKERFYQ 220 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc------hhHHHHHh
Confidence 9999986543 2223467789999998876 78899999999999999999 5777653221 01111111
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.. ....+.+++.+|++.+|.+||++.|+++.|.
T Consensus 221 --~~~~~~~~------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 --DQHRLPMP------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --cCCCCCCC------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111111 1145789999999999999999999999873
No 285
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-34 Score=302.42 Aligned_cols=239 Identities=22% Similarity=0.334 Sum_probs=185.0
Q ss_pred eeecccceeEEEEEccC-------------------------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCce
Q 003780 506 CIGTGGYGSVYKAQLPN-------------------------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 560 (796)
.||+|+||.||+|.... ...||+|++..... .....+.+|+.++++++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 58999999999996421 23588898865432 224578889999999999999
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
+++++++..+...++||||+++|+|..++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++..
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999999987532 2478899999999999999999998 99999999999999764
Q ss_pred C-------cEEEeeeccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHH-hCCCCCcccccCC
Q 003780 641 L-------EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVL-MGRHPGELLSSLS 711 (796)
Q Consensus 641 ~-------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~ell-tg~~p~~~~~~~~ 711 (796)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-- 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-- 227 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--
Confidence 3 3799999988644321 12347788999998865 56789999999999999995 78999863221
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. ...........+. .....+.+++.+||+.+|++||++++++++|.
T Consensus 228 ----~~---~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 ----SE---KERFYEKKHRLPE-----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----HH---HHHHHHhccCCCC-----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 1111111111111 01124778999999999999999999999873
No 286
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.9e-34 Score=301.81 Aligned_cols=250 Identities=27% Similarity=0.421 Sum_probs=195.7
Q ss_pred eeeecccceeEEEEEccC-------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 505 YCIGTGGYGSVYKAQLPN-------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.||+|+||.||+|+.++ ++.+|+|.+...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD--QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch--hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 358999999999997542 357999988654322 22457889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcC----cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-----cEEEeee
Q 003780 578 KYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-----EAFVADF 648 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-----~~kl~Df 648 (796)
||+++++|.+++.+.. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999997542 223478899999999999999999998 999999999999999887 8999999
Q ss_pred ccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhh
Q 003780 649 GTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 649 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
|+++....... ......++..|+|||++.++.++.++|||||||++|||++ |+.||..... . .....+
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--------~-~~~~~~ 226 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--------Q-EVLQHV 226 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--------H-HHHHHH
Confidence 99976543221 1122345678999999999999999999999999999998 9999863211 1 111111
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
......... ......+.+++.+||+.+|++||+++++++.|++
T Consensus 227 ~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 227 TAGGRLQKP---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred hcCCccCCc---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 211111111 1123457899999999999999999999998863
No 287
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.6e-34 Score=306.23 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=199.4
Q ss_pred cCCccceeeecccceeEEEEEcc-CCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
++|+..+.||+|+||.||+|... +|+ .||+|.+...... ....++.+|+.++++++||||+++++++..+ ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 56788899999999999999753 444 5788888654432 2234688999999999999999999999754 46
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 79999999999999987643 2478889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.... .....+.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~---------~~~~~~~~~~~~~ 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP---------TREIPDLLEKGER 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC---------HHHHHHHHHCCCC
Confidence 6433221 122335678999999998889999999999999999997 899986321 1111122222211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..... .....+.+++.+|+..+|++||+++++++.+++..
T Consensus 230 ~~~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 230 LPQPP---ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 12234778999999999999999999999998754
No 288
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.3e-34 Score=296.32 Aligned_cols=251 Identities=27% Similarity=0.449 Sum_probs=200.0
Q ss_pred CccceeeecccceeEEEEEccC-----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPN-----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
+++.+.||.|+||.||+++..+ +..||+|++....... ..+.+..|++++++++||||+++++++...+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ--QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH--HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 3567889999999999997653 4889999997664432 34688999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
+|||+++++|.+++...... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999999764321 279999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcc-ccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 656 SDSSNRT-IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 656 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
....... ...+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ............. ...
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~-~~~ 225 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--------NEEVLEYLKKGYR-LPK 225 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHhcCCC-CCC
Confidence 4322111 1236789999999988889999999999999999998 788876311 1111112211111 111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. .....+.+++.+|++.||++|||+.|+++.|
T Consensus 226 ~~---~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 PE---NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CC---cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11 1233578899999999999999999998764
No 289
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.2e-34 Score=305.24 Aligned_cols=250 Identities=25% Similarity=0.375 Sum_probs=202.5
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|.+.+.||+|+||.||++.. .+++.||+|.+....... .+.+.+|+.++++++||||+++++++...+..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK---KELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH---HHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5789999999999999999964 468899999986443322 357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.+. .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999998753 378889999999999999999999 9999999999999999999999999998766544
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........+++.|+|||......++.++||||||+++|++++|+.||....... ......... .+.... .
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~--------~~~~~~~~~-~~~~~~-~ 238 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNG-TPELQN-P 238 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh--------heeehhcCC-CCCCCC-c
Confidence 433444568889999999988888999999999999999999999997432210 000010011 111110 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+||+.+|++||++.+++.+
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122347789999999999999999999988
No 290
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.7e-34 Score=303.74 Aligned_cols=254 Identities=25% Similarity=0.355 Sum_probs=200.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
...|+..+.||+|+||.||+|... +++.||+|.+...........+.+.+|+++++.++||||+++.+++..++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 346888899999999999999754 6899999998755443333456788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||++ |++.+.+.... ..+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99997 47777665432 2488999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
. ....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ............ +..
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~--------~~~~~~~~~~~~-~~~ 234 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNDS-PTL 234 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH--------HHHHHHHhcCCC-CCC
Confidence 2 2345788999999874 45678899999999999999999999863221 111111111111 111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
. .......+.+++.+||+.||++||++.+++++..-.
T Consensus 235 ~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 271 (307)
T cd06607 235 S--SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271 (307)
T ss_pred C--chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 1 111223578999999999999999999999875433
No 291
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.1e-34 Score=298.75 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=197.9
Q ss_pred CccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
|.+.+.||+|+||.||+|..+ +++.||+|++........ ..+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSS-DIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChH-HHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 567789999999999999643 468899999976544332 2567889999999999999999999886542
Q ss_pred -eeeEEEeeccCCcHHHHHhhcC---cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEee
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVAD 647 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 647 (796)
..++++||+++|+|.+++.... ....+++....+++.|++.||+|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 2478899999999998875332 223478889999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHh
Q 003780 648 FGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 648 fg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
||.++....... ......+++.|++||...+..++.++|||||||++|||++ |+.||..... .......
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHH
Confidence 999986543221 1122335678999999988889999999999999999999 8888763211 1111111
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
....... .. ......+.+++.+|++.+|++||++.|+++.|+..
T Consensus 229 ~~~~~~~-~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 229 IKGNRLK-QP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HcCCcCC-CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111 10 11223588999999999999999999999999864
No 292
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.2e-34 Score=301.82 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=200.3
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|...+.||+|++|.||++.. .+++.+++|++...... ..+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 355567999999999999975 47899999988644322 23568899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999998762 378899999999999999999999 99999999999999999999999999887654433
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......|++.|+|||...+..++.++|||||||++|+|++|+.||..... ..... .+.....+.... ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~-~~~~~~~~~~~~-~~ 239 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMK-RIRDNLPPKLKN-LH 239 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHH-HHHhcCCCCCcc-cc
Confidence 333345689999999999888899999999999999999999999863211 11111 111111111111 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++||++.+++++-
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 270 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNHP 270 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHccCc
Confidence 1234588999999999999999999999863
No 293
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.5e-35 Score=302.97 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=203.6
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|+||.||+|..+ +++.||+|.+...........+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4888999999999999999765 689999999987654443446789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999765 2488999999999999999999998 99999999999999999999999999988654432
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ........... ...... .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~-~~~~~~---~ 223 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQET-ADVLYP---A 223 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhcc-ccccCc---c
Confidence 223455888999999998888999999999999999999999998743210 11111122221 111111 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTM--QRVCQ 767 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~--~evl~ 767 (796)
.....+.+++.+|++.||.+||++ +|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 122457899999999999999999 55543
No 294
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.6e-34 Score=301.18 Aligned_cols=251 Identities=28% Similarity=0.466 Sum_probs=201.1
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC---CCceeeEEeEEEecceeeE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA---HRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~l 575 (796)
.|+..+.||+|+||.||+|.. .+++.||+|.+....... ..+++.+|+.++++++ |||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD--DVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCch--hHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 477788999999999999975 578999999987543322 2457888999999987 9999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++... .+++.....++.|+++||.|||+. +|+|+||+|+||+++.++.++++|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999998653 488999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
..........|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... .... .......+...
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~-~~~~~~~~~~~ 223 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMM-LIPKSKPPRLE 223 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhh-ccccCCCCCCC
Confidence 544334445688999999988654 4688999999999999999999998743211 1111 11111111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
. ......+.+++.+|++.||++||++.|++++-.
T Consensus 224 ~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 224 D--NGYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred c--ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 1 012345789999999999999999999988643
No 295
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.2e-34 Score=304.58 Aligned_cols=258 Identities=28% Similarity=0.356 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|..+ +++.||+|+++...... ...+.+.+|++++++++||||+++++++..++..++|+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-DVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-cchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36889999999999999999765 58899999887654322 23467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++++.+..+..+. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999987777665543 2378999999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh----------
Q 003780 658 SS-NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL---------- 725 (796)
Q Consensus 658 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 725 (796)
.. ......++..|+|||++.+. .++.++||||||+++|+|++|+.||...... ..........
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-----DQLYLIQKCLGPLPPSHQEL 228 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCHHHhhh
Confidence 32 23345678899999999888 7889999999999999999999998632210 0000000000
Q ss_pred ---cC-----CCCCccch------hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 ---DS-----RLSPPVDR------MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 ---~~-----~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+. ........ ........+.+++.+||+.+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00 00000000 000113458899999999999999999999864
No 296
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.5e-34 Score=302.08 Aligned_cols=260 Identities=24% Similarity=0.262 Sum_probs=196.1
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
++++|.+.+.||+|+||.||+|.. .+|+.||+|++........ ...+.+|+.+++.++|+||+++.+++..++..++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV--PFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC--cHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 356899999999999999999965 4689999999875543221 2356789999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+||+. +++.+++.... ..+.+..+..++.|+++||+|||+. +|+|+||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 67776665432 2367888889999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc--------
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD-------- 726 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 726 (796)
..........+++.|+|||++.+. .++.++|||||||++|+|++|+.||+..... ............
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV----FEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH----HHHHHHHHHHcCCCChhhhh
Confidence 333333334578899999998753 4788999999999999999999999743210 000000000000
Q ss_pred ----------CCC----CCccch--hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 ----------SRL----SPPVDR--MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ----------~~~----~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
... ...... ........+.+++.+|++.||.+|||++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000 000000 000113457789999999999999999999865
No 297
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=290.48 Aligned_cols=253 Identities=25% Similarity=0.308 Sum_probs=208.9
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|+..+++|+|.||.|..++-+ .|+.||+|++++..........--..|-+++...+||.+..+--.++..+..+.
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3568999999999999999999754 799999999998876655545556788899999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||..||.|+.++.+.. .+++.....+-..|..||.|||++ +||.||+|.+|.|+|.+|++||+|||+++.--
T Consensus 246 VMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999998887643 478887888889999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.........+|||.|+|||++....|..++|.|.+||++|||++|+.||... .......-++...+..+..
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~--------dh~kLFeLIl~ed~kFPr~- 390 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK--------DHEKLFELILMEDLKFPRT- 390 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc--------chhHHHHHHHhhhccCCcc-
Confidence 5555667789999999999999999999999999999999999999999832 2222333333333322211
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
.. .+...++...+..||.+|- .++||.++
T Consensus 391 -ls---~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 391 -LS---PEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred -CC---HHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 11 1245688899999999995 56777666
No 298
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.3e-34 Score=298.01 Aligned_cols=246 Identities=27% Similarity=0.390 Sum_probs=199.5
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||.|++|.||+++.. +++.||+|++...........+.+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999765 5899999999876554444457899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 665 (796)
.+++.+.. .+++..+..++.|+++||+|+|+. +++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99998653 378899999999999999999998 99999999999999999999999999998765432 223346
Q ss_pred cccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHH
Q 003780 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745 (796)
Q Consensus 666 gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 745 (796)
+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||..... ...................... ...+.
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 224 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKLEFPNYI---DKAAK 224 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCCCCCccc---CHHHH
Confidence 88899999999888899999999999999999999999874321 1122222333211122221111 34588
Q ss_pred HHHHHcCCCCCCCCCC-----HHHHHHH
Q 003780 746 TVALACLHSKPKFRPT-----MQRVCQE 768 (796)
Q Consensus 746 ~li~~cl~~dP~~RPs-----~~evl~~ 768 (796)
+++.+||+.+|++||+ ++|++++
T Consensus 225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 225 DLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred HHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 9999999999999999 6777764
No 299
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.5e-34 Score=301.63 Aligned_cols=258 Identities=22% Similarity=0.353 Sum_probs=199.4
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||+|+.+ +|+.||+|++....... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG--TPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc--chHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788999999999999999865 68999999987654322 13567789999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++ +|.+++........+++..+..++.|+++||+|||+. +++||||||+||++++++.++++|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 8888887654445689999999999999999999998 99999999999999999999999999997654432
Q ss_pred CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc-----------
Q 003780 659 SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD----------- 726 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 726 (796)
.......++..|+|||++.+. .++.++||||+||++|+|++|+.||...... .......+...
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-----DQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHHHhCCCChhhHHHHh
Confidence 222334578899999987654 5688999999999999999999998743210 00000000000
Q ss_pred --CCCCCccc--------hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 --SRLSPPVD--------RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 --~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
........ .........+.+++.+|++.||.+||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 0001123457799999999999999999999865
No 300
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.4e-34 Score=300.96 Aligned_cols=240 Identities=22% Similarity=0.434 Sum_probs=187.1
Q ss_pred eeeecccceeEEEEEccC--------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 505 YCIGTGGYGSVYKAQLPN--------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
+.||+|+||.||+|..+. ...||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR---NYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhH---HHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999996532 23488887754332 2345788899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc--------EEEeee
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE--------AFVADF 648 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--------~kl~Df 648 (796)
|||+++|+|.++++.... .+++..+.+++.||+.||+|||+. +|+||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999999999976533 478899999999999999999999 9999999999999987765 589999
Q ss_pred ccccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCC-CCCcccccCCCCCchhhhHHHHhhc
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGR-HPGELLSSLSSPSSDQKIMLIDVLD 726 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (796)
|.+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .|+..... . .......
T Consensus 153 g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--------~-~~~~~~~ 219 (258)
T cd05078 153 GISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS--------Q-KKLQFYE 219 (258)
T ss_pred ccccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH--------H-HHHHHHH
Confidence 98865432 2234578899999998864 5788999999999999999995 55542111 1 1111112
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 727 SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 727 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+. .....+.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPA-----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCC-----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111 11234789999999999999999999999874
No 301
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.2e-34 Score=302.72 Aligned_cols=248 Identities=25% Similarity=0.269 Sum_probs=194.1
Q ss_pred eecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||+||++.. .+|+.||+|.+...........+.+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999964 46899999998765433333345677899999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 665 (796)
.+++.+... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999976543 3488999999999999999999999 9999999999999999999999999998765432 2222345
Q ss_pred cccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHH
Q 003780 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745 (796)
Q Consensus 666 gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 745 (796)
++..|+|||+..+..++.++||||+||++|+|++|+.||...... .....+....... .... .......+.
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~-~~~~---~~~~~~~~~ 226 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-----VEKEELKRRTLEM-AVEY---PDKFSPEAK 226 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-----ccHHHHHhccccc-cccC---CccCCHHHH
Confidence 788999999998888999999999999999999999998743221 0111111111111 1111 111233578
Q ss_pred HHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 746 TVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 746 ~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
+++.+||+.||++|| ++.+++++
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHhC
Confidence 999999999999999 55555543
No 302
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.6e-34 Score=298.73 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=184.8
Q ss_pred eeecccceeEEEEEccCC---cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 506 CIGTGGYGSVYKAQLPNG---KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.||+|+||.||+|+..++ ..+++|.+...... ...+.+.+|+..++.++||||+++++++......++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS--KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh--HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 589999999999975433 34566766544322 2246889999999999999999999999999999999999999
Q ss_pred CcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC--C
Q 003780 583 GSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS--S 659 (796)
Q Consensus 583 gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--~ 659 (796)
|+|.+++++... ....++..+..++.||++||+|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999986432 23456777889999999999999998 99999999999999999999999999986432211 1
Q ss_pred CccccccccCccCcccccc-------CCcCcchhHHHHHHHHHHHHhC-CCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 660 NRTIVAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLMG-RHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwSlGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
......++..|+|||+... ..++.++|||||||++|||+++ ..||.... ........+......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~~~~~ 228 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS--------DREVLNHVIKDQQVK 228 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHhhcccc
Confidence 1233457889999998743 2356799999999999999974 66765321 111111111111100
Q ss_pred -ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 -PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
............+.+++..|+ .+|++||+++||++.|.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 000001112234677888999 67999999999998873
No 303
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=279.48 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=200.1
Q ss_pred ccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEee
Q 003780 502 DIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
+....+|.|+.|.||+++.+ .|...|||.+.+....++ .+++...+.++..-+ +|+||+.+|||..+...++.||.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee--~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE--NKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH--HHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 34456999999999999765 689999999988765543 467778888777665 89999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
|.. .++.++++.+. ++++...-++...+..||.||.+++ +|+|||+||+|||+|+.|++|+||||++.++-+ ..
T Consensus 173 Ms~-C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd-Sk 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD-SK 246 (391)
T ss_pred HHH-HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec-cc
Confidence 864 56666665433 3788888899999999999999886 999999999999999999999999999987754 34
Q ss_pred CccccccccCccCccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 660 NRTIVAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~---~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
..+..+|.+.|||||.+.-. .|+.++||||||+.++||.||+.||..-. .+...+..+++... +....
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-------tdFe~ltkvln~eP-P~L~~- 317 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK-------TDFEVLTKVLNEEP-PLLPG- 317 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC-------ccHHHHHHHHhcCC-CCCCc-
Confidence 44556799999999988643 58889999999999999999999987421 22334444444322 22221
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+++++..||+.|+.+||...++++|-.
T Consensus 318 ~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F 351 (391)
T KOG0983|consen 318 HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF 351 (391)
T ss_pred ccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence 1123455889999999999999999999998854
No 304
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.9e-34 Score=301.61 Aligned_cols=257 Identities=25% Similarity=0.330 Sum_probs=200.4
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||+|... +|+.||+|++....... ...+.+.+|+.++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 4788999999999999999754 78999999987655322 224678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+ +++|.+++.... ..+++..+..++.||++||+|||+. +++|+||||+||+++.++.++++|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999987643 3489999999999999999999999 99999999999999999999999999998765432
Q ss_pred C-CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC--------
Q 003780 659 S-NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR-------- 728 (796)
Q Consensus 659 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 728 (796)
. ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... .........+...
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-----EQLAIVFRTLGTPNEETWPGL 228 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-----HHHHHHHHHcCCCChHHHhhc
Confidence 1 12334588899999988654 4688999999999999999998877532110 0000000000000
Q ss_pred --------C------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 729 --------L------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 729 --------~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
. ..............+.+++.+|++.+|++||+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000000011223568899999999999999999999986
No 305
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.4e-34 Score=301.35 Aligned_cols=255 Identities=28% Similarity=0.397 Sum_probs=206.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.++.|+..+.||+|++|.||+|..+ +++.|++|++..... ..+.+.+|++++++++|+|++++++++..++..++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4567888899999999999999765 689999999976544 24578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998754 3589999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
..........++..|+|||.+.+..++.++|||||||++|+|++|+.||..... .............. ...
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~-~~~ 238 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP--------LRALFLITTKGIPP-LKN 238 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCCCC-Ccc
Confidence 433333344578899999999888899999999999999999999999863221 11111111111111 111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+.+++.+|++.+|.+||++.+++++-.
T Consensus 239 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 239 -PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred -hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 1112345789999999999999999999998643
No 306
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.3e-34 Score=300.32 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=194.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHH-HhhcCCCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHV-LSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
++|++.+.||+|+||.||+++.+ +|+.||+|++........ ..++..|+.. ++..+||||+++++++..++..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 46889999999999999999764 699999999876543222 2345556664 5667899999999999999999999
Q ss_pred EeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||++ |+|.+++.... ....+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+|||.+....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 58888776532 2245899999999999999999999853 89999999999999999999999999998654
Q ss_pred CCCCCccccccccCccCcccccc----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYT----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.. .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ............. +
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~-~ 226 (283)
T cd06617 156 DS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-------PFQQLKQVVEEPS-P 226 (283)
T ss_pred cc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-------CHHHHHHHHhcCC-C
Confidence 32 12233458889999998865 4467899999999999999999999863211 1111222221111 1
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... ......+.+++.+|+..+|++||++++++++-
T Consensus 227 ~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 227 QLPA--EKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred CCCc--cccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1110 01123478999999999999999999999863
No 307
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.1e-34 Score=306.91 Aligned_cols=265 Identities=25% Similarity=0.346 Sum_probs=197.5
Q ss_pred CCccceeeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMF 574 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 574 (796)
+|++.+.||+|++|.||+|..+ +++.||+|.+...........+.+.+|+.++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999764 4799999999875432233345678899999999999999999999988 8899
Q ss_pred EEEeeccCCcHHHHHhhcCc--ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC----CCcEEEeee
Q 003780 575 LIYKYMKRGSLFCFLRNDYE--AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS----KLEAFVADF 648 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~----~~~~kl~Df 648 (796)
+||||+++ ++.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 66666653322 23588999999999999999999999 9999999999999999 899999999
Q ss_pred ccccccCCCCC---CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC-CchhhhH---
Q 003780 649 GTARLLDSDSS---NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP-SSDQKIM--- 720 (796)
Q Consensus 649 g~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~-~~~~~~~--- 720 (796)
|++........ ......+++.|+|||++.+. .++.++|||||||++|+|++|+.||......... .......
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987644322 12234578899999987664 5788999999999999999999998743321100 0000000
Q ss_pred HHHhhc---------------------CCCCCccc--hhhH------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 721 LIDVLD---------------------SRLSPPVD--RMVM------QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 721 ~~~~~~---------------------~~~~~~~~--~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+...+. ........ .... .....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 00000000 0000 123457899999999999999999999876
No 308
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=308.42 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=210.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
...|.+...||+|.|+.|..|++ .+|..||+|.+.+....... .+.+.+|+++|..++|||||+++.+...+...|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 45788899999999999999965 46999999999888766544 34589999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||..+|.+++++.++.. ..+..+..++.|+.+|++|||++ .|||||||++||+++.++++||+|||++.++..
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999997754 45578888999999999999999 999999999999999999999999999998874
Q ss_pred CCCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. ......+|++.|.|||++.+..|. +.+|+||+|+++|-|+.|..||+.-.. ...-...+....+.++.-
T Consensus 208 ~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------k~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 208 G-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------KELRPRVLRGKYRIPFYM 278 (596)
T ss_pred c-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------ccccchheeeeeccccee
Confidence 3 334557899999999999988765 689999999999999999999984221 111122233333322211
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..++.+++++++-.+|.+|++++++.++-.
T Consensus 279 -----s~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 279 -----SCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred -----echhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 123568999999999999999999998854
No 309
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.9e-34 Score=302.87 Aligned_cols=257 Identities=23% Similarity=0.299 Sum_probs=197.5
Q ss_pred CccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|++.+.||.|++|.||+|.. .+|+.||+|++....... ...+.+.+|++++++++|||++++++++..++..++||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 67788999999999999975 479999999987654322 2235688899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
++ ++|.+++..... ..+++..+.+++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 689998876542 3489999999999999999999998 999999999999999999999999999976543332
Q ss_pred CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH---------------
Q 003780 660 NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID--------------- 723 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--------------- 723 (796)
......+++.|+|||++.+. .++.++||||||+++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-----DQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCChHHhhhhhh
Confidence 22333568899999987654 5688999999999999999999998632210 00000000
Q ss_pred ------hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 ------VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 ------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
....................+.+++.+|++.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000000011112357799999999999999999999865
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.1e-34 Score=302.64 Aligned_cols=256 Identities=24% Similarity=0.303 Sum_probs=198.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 575 (796)
++|++.+.||+|+||.||+|..+ +++.+|+|.+....... .....+.+|+.++++++||||+++++++... +..++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-GFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-cchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 47888999999999999999765 68999999997654332 2234677899999999999999999999877 89999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|+||+++ +|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+....
T Consensus 84 v~e~~~~-~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcCc-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999985 89888876432 589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc--------
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD-------- 726 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 726 (796)
..........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-----DQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCchHHHH
Confidence 543333344578899999988754 4688999999999999999999998743210 00000000000
Q ss_pred ------------------CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 ------------------SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..+....... .....+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPAL--SLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred Hhhccchhcccccccccchhhhcccccc--CCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000000 013347789999999999999999999875
No 311
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-33 Score=292.30 Aligned_cols=250 Identities=31% Similarity=0.457 Sum_probs=204.0
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|+..+.||+|++|.||++..+ +++.+++|++..... ...+.+.+|++++++++|||++++++++..+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4778899999999999999765 789999999977654 224688999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++.... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999987653 3489999999999999999999998 99999999999999999999999999998765443
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......... ...+.... ..
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~~~~-~~ 221 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP--------MKALFKIAT-NGPPGLRN-PE 221 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch--------HHHHHHHHh-cCCCCcCc-cc
Confidence 2 3345688999999999888889999999999999999999999873211 111111111 11111111 11
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 113357899999999999999999999875
No 312
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.1e-33 Score=301.24 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=202.3
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|+..+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++++++|||++++++++..+...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 367788999999999999975 4689999999876544333445678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+.+ ++.+.+.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 9975 7777775432 3488999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 659 SNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
....|++.|+|||++. +..++.++|||||||++|||++|+.||.... ..................
T Consensus 179 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~- 246 (317)
T cd06635 179 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPTLQS- 246 (317)
T ss_pred ---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhccCCCCCC-
Confidence 2345888999999874 4568889999999999999999999986321 111222222222211111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
......+.+++.+|++.+|++||++.+++++........
T Consensus 247 --~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 247 --NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred --ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 112234789999999999999999999999876655433
No 313
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.9e-34 Score=301.34 Aligned_cols=259 Identities=22% Similarity=0.316 Sum_probs=195.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|++|.||+|..+ +|+.||+|.+....... ...+.+.+|++++++++||||+++++++......++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 47889999999999999999765 68999999986553322 22357888999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeeccccccCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARLLDS 656 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 656 (796)
||++ +++.+++..... ...++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred eccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 9996 478877765432 2357888889999999999999999 9999999999999985 55789999999976543
Q ss_pred CCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc---------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD--------- 726 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 726 (796)
.........+++.|+|||++.+ ..++.++||||+||++|+|+||+.||...... ...........
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-----DELFKIFRILGTPNEETWPG 230 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCChhhccc
Confidence 3222233457889999998765 45788999999999999999999998632210 00000000000
Q ss_pred -----------CCCCCc-cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 -----------SRLSPP-VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 -----------~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...... ...........+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000011123347889999999999999999999986
No 314
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=305.80 Aligned_cols=257 Identities=26% Similarity=0.391 Sum_probs=206.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc---CCc--EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP---NGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
..+..+..+.||+|-||.||+|... .|+ .||||..+.+...+. .+.|..|..+|+.++||||++++|.|.+.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~--tekflqEa~iMrnfdHphIikLIGv~~e~- 463 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD--TEKFLQEASIMRNFDHPHIIKLIGVCVEQ- 463 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh--HHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence 3445566678999999999999643 233 488898877655443 56899999999999999999999999754
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|||.++-|-|.++++.++. .++......++.||..||+|||+. ++|||||..+|||+....-+|++|||++
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred ceeEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchh
Confidence 56899999999999999997654 488888899999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccc-cccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 652 RLLDSDSSNRTI-VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 652 ~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
+.+..+...... ..-+..|||||.+.-..++.++|||.|||.+||++. |..||......+. ...+...-
T Consensus 539 R~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV---------I~~iEnGe 609 (974)
T KOG4257|consen 539 RYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV---------IGHIENGE 609 (974)
T ss_pred hhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce---------EEEecCCC
Confidence 998877654433 223567999999999999999999999999999875 9999985432211 11111211
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
+.+. +...++.+..+..+||.+||.+||.+.|+...|....
T Consensus 610 RlP~---P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 610 RLPC---PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CCCC---CCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 1111 2234445778999999999999999999988886553
No 315
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=312.33 Aligned_cols=252 Identities=25% Similarity=0.418 Sum_probs=203.6
Q ss_pred ccceeeecccceeEEEEE-ccCCc----EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 502 DIKYCIGTGGYGSVYKAQ-LPNGK----VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~-~~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
...++||+|+||+||+|. .++|+ +||+|++........ ..++..|+-.|.+++|||+++++++|.... ..||
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~--s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKA--SIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchh--hHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 346789999999999995 44444 588888876554432 468999999999999999999999998766 7899
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
++||+.|+|.++++.++. .+-.+..+.|..|||+||.|||.+ ++|||||.++|||+.....+||.|||+++....
T Consensus 776 tq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 999999999999988654 477888999999999999999999 999999999999999999999999999998877
Q ss_pred CCCCccccc--cccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DSSNRTIVA--GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
+........ -.+.|||=|.+.-..|+.++|||||||++||++| |..|++... ...+.+.+...-+-+.
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~---------~~eI~dlle~geRLsq 921 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP---------AEEIPDLLEKGERLSQ 921 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC---------HHHhhHHHhccccCCC
Confidence 655443333 3567999999999999999999999999999997 889987432 2233333333322111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
+.-....+..++.+||..|++.||+++++..++.+..
T Consensus 922 ---PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 ---PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred ---CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 1122334677889999999999999999999987643
No 316
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.4e-34 Score=301.75 Aligned_cols=260 Identities=23% Similarity=0.277 Sum_probs=196.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecce----
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKC---- 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~---- 572 (796)
++|++.+.||+|+||.||+|... +++.||+|++....... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46889999999999999999754 68999999887654322 22356788999999995 6999999999987665
Q ss_pred -eeEEEeeccCCcHHHHHhhcCc--ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeee
Q 003780 573 -MFLIYKYMKRGSLFCFLRNDYE--AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADF 648 (796)
Q Consensus 573 -~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Df 648 (796)
.++||||+++ +|.+++..... ...+++..+..++.||++||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999986 78888765432 24579999999999999999999999 9999999999999998 889999999
Q ss_pred ccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
|.+..............+++.|+|||++.+ ..++.++||||||+++|+|++|..||...... .....+...+..
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~ 230 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL-----QQLLHIFKLLGT 230 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHHHhCC
Confidence 999865433222233457888999998765 45789999999999999999999998632211 000000000000
Q ss_pred -------------------CCCC-ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 -------------------RLSP-PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 -------------------~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...+ ............+.+++.+|+++||.+||+++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0000001123457889999999999999999999876
No 317
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=314.36 Aligned_cols=306 Identities=26% Similarity=0.287 Sum_probs=222.9
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
|+.|+|.+|.|+.+-.+++..++.|+.||||.|.|+.+.-+.|..=.++++|+|++|+|+..-.+.|..+.+|..|.|++
T Consensus 127 l~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsr 206 (873)
T KOG4194|consen 127 LEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSR 206 (873)
T ss_pred eeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeeccc
Confidence 55555555555555555555556666666666666644444555556666666666666666666666666777777777
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
|+|+...+..|.+|+.|+.|+|..|+|.-.---.|.++++|+.|.|..|.++....+.|..+.++++|+|+.|+++..-.
T Consensus 207 NrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~ 286 (873)
T KOG4194|consen 207 NRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNE 286 (873)
T ss_pred CcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhc
Confidence 77766666666667777777777777665545566677777777777777776666777778888888888888877667
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSE 338 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 338 (796)
.++.+++.|+.|+||+|.|..+.++++.-.++|+.|+|++|+|+...+.+|..+..|++|+|++|.+...-...|..+++
T Consensus 287 g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lss 366 (873)
T KOG4194|consen 287 GWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSS 366 (873)
T ss_pred ccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhh
Confidence 77888888888888888888888888888888888888888888878888888888888888888887766777888888
Q ss_pred CcEEEeecccccCCCCccc----cccccceEEecccccCCCCCc----cccccccccccCCCCcccCCCCCCCCC
Q 003780 339 LRNITLRNNNLSGSIPPEI----GLMKLEYLDLSHNKLNGTIPP----FLYHRFPLDLSYNDLEGEIPDYFRDSP 405 (796)
Q Consensus 339 L~~L~L~~N~l~~~~~~~~----~~~~L~~L~l~~N~l~~~~p~----~~~~~~~l~l~~N~l~~~~p~~~~~~~ 405 (796)
|+.|+|++|.|+..+.+.. ++++|+.|++.+|+|. .||+ .+..+..|||.+|.+-...|+.|....
T Consensus 367 L~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~ 440 (873)
T KOG4194|consen 367 LHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPME 440 (873)
T ss_pred hhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeecccccccch
Confidence 8888888888887665542 5788888888888887 5664 234556788888888888888776653
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.5e-33 Score=291.23 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=206.5
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lV 576 (796)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++++++++||||+++++.+... ...++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4777899999999999999765 7999999998766543 23356889999999999999999999999988 899999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+++++|.+++.+.. .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999998654 589999999999999999999998 999999999999999999999999999987665
Q ss_pred CCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......++..|+|||...+...+.++||||||+++|+|++|+.||.... ...............+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~ 226 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-------NPMAALYKIGSSGEPPEIP 226 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHHHhccccCCCcCCC
Confidence 432 1334568889999999988889999999999999999999999987432 1111112222111111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|++.||++||++.|++++
T Consensus 227 ---~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 227 ---EHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---cccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 1223458899999999999999999999876
No 319
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=310.56 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=205.4
Q ss_pred cCCccceeeecccceeEEEEEccCCcE-EEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKV-VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|+++..||.|+||.||+|..++... .|.|++.-... .....+.-|++++...+||+||++++.|..++..+++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse---EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE---EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch---hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 346667789999999999998775444 45566643332 23678999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||.||-.+.++-.-. ..+.+.++..+++|++.||.|||++ +|||||||+.|||++-+|.++++|||.+......
T Consensus 109 EFC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred eecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH
Confidence 9999999988876543 3489999999999999999999999 9999999999999999999999999998754433
Q ss_pred CCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 658 SSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
......+.|||.|||||+.. ..+|+.++||||||++|.||..+.+|....+. ...+..+..+.. |.
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--------MRVllKiaKSeP-PT 254 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEP-PT 254 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--------HHHHHHHhhcCC-Cc
Confidence 33445678999999999864 56799999999999999999999999663322 122222222222 21
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
.-. +..-...+.+++.+||..||+.||+++++++|-.--..+.
T Consensus 255 Llq-PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 255 LLQ-PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred ccC-cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 111 2222345889999999999999999999999976554433
No 320
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-33 Score=297.71 Aligned_cols=246 Identities=22% Similarity=0.232 Sum_probs=187.8
Q ss_pred eeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHh---hcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 506 CIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLS---KIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~---~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
.||+|+||.||++... +++.+|+|.+.............+.+|..+++ ..+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999754 68999999987654332221223344444333 3479999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 661 (796)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999999887543 489999999999999999999999 9999999999999999999999999998755432 22
Q ss_pred cccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHH
Q 003780 662 TIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQD 740 (796)
Q Consensus 662 ~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (796)
....|++.|+|||... +..++.++||||+||++|+|++|+.||...... ........ ......... ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~-~~~~~~~~~---~~~ 222 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK------DKHEIDRM-TLTVNVELP---DSF 222 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc------CHHHHHHH-hhcCCcCCc---ccc
Confidence 2346899999999886 456789999999999999999999998743210 11111111 111111111 112
Q ss_pred HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 741 IVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 741 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
...+.+++.+|++.||++|| +++|+++|.
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 23577899999999999999 599888874
No 321
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.8e-33 Score=290.21 Aligned_cols=250 Identities=27% Similarity=0.446 Sum_probs=205.1
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||++..+ +++.|++|.+....... ...+.+.+|++++++++|||++++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH-HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4788899999999999999654 68899999998775432 335689999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++++|.+++.+. ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999998765 3489999999999999999999999 99999999999999999999999999998776544
Q ss_pred CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhH
Q 003780 659 SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVM 738 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (796)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ............ +... .
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-~~~~---~ 221 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP--------MAALFRIVQDDH-PPLP---E 221 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHhccCC-CCCC---C
Confidence 433445688999999998888888999999999999999999999863221 111111111111 1111 1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 739 QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 739 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.+|++||++.+++.+
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 123347799999999999999999999864
No 322
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=307.12 Aligned_cols=250 Identities=24% Similarity=0.402 Sum_probs=201.4
Q ss_pred CccceeeecccceeEEEEEcc--CCc--EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP--NGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
....+.||+|.||+|++|.++ +|+ .||||.+....... ...+|.+|+.+|.+++|||+++++|...+ ....+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 344578999999999999765 344 58999998877654 46799999999999999999999999987 677899
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+|.++.|+|.+.|++. ....+.......++.|||.||.||.++ +.|||||..+|+++-..-.+||+|||+++-++.
T Consensus 189 ~ELaplGSLldrLrka-~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKA-KKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhhcccchHHHHHhhc-cccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999999983 345578888899999999999999999 999999999999999999999999999998876
Q ss_pred CCCCccc---cccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 657 DSSNRTI---VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 657 ~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
......+ ..-.+.|+|||.+.-..++.++|||+|||++|||+| |..||-... ...+.+.+|.+-.-+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~---------g~qIL~~iD~~erLp 335 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR---------GIQILKNIDAGERLP 335 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC---------HHHHHHhccccccCC
Confidence 5433322 123567999999999999999999999999999998 567765221 122333333222211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. ......+.++++.||..+|.+|||+..+.+.+
T Consensus 336 RP---k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 336 RP---KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CC---CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 11 22334588999999999999999999998554
No 323
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.2e-33 Score=290.25 Aligned_cols=253 Identities=27% Similarity=0.409 Sum_probs=206.8
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||.|++|.||++... +++.||+|++....... ...+.+.+|++++++++|||++++.+.+...+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh-HHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4788899999999999999754 68999999997765432 234678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|+++++|.+++.+.. ....+++..+..++.++++||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999997642 124589999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
........|++.|+|||...+..++.++||||+|+++++|++|+.||.... ..............+ ...
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~-~~~-- 225 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--------LLELALKILKGQYPP-IPS-- 225 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--------HHHHHHHHhcCCCCC-CCC--
Confidence 323334568889999999988889999999999999999999999986322 111222222222211 111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|+..+|++||++.|++++
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 -QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222347889999999999999999999875
No 324
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9e-34 Score=299.98 Aligned_cols=257 Identities=24% Similarity=0.295 Sum_probs=194.8
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~ 577 (796)
+|+..+.||+|+||.||++.. .+++.||+|.+...... .....+.+|+.++.++. ||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 455667899999999999965 46899999998765433 22457889999999996 999999999999999999999
Q ss_pred eeccCCcHHHHH---hhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 578 KYMKRGSLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 578 e~~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
||+.. ++.++. ... ....+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.++|+|||+++..
T Consensus 83 e~~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99875 554433 221 2245889999999999999999999742 8999999999999999999999999999765
Q ss_pred CCCCCCccccccccCccCccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.... ......|+..|+|||++.+. .++.++||||+||++|+|++|+.||.... ................
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~ 230 (288)
T cd06616 159 VDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKGDPPI 230 (288)
T ss_pred ccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCCCCCc
Confidence 4322 12233588899999998766 68899999999999999999999986321 1111112221111111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
............+.+++.+|++.||++|||++||+++-.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 111111123345889999999999999999999998744
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-33 Score=292.91 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=204.6
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|++.+.||+|++|.||++.. .+++.+|+|.+........ ...++.+|++++++++||||+++.+++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK-EREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHH-HHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 478889999999999999964 4788999999876554332 24577889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|+++++|.+++.+.. ....+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+|++|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999987632 224588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... . ...........+...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~-~~~~~~~~~~~~~~~--- 222 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--------Q-DLRYKVQRGKYPPIP--- 222 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------H-HHHHHHhcCCCCCCc---
Confidence 22234588899999999998899999999999999999999999873221 1 111112222212111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......+.+++.+|++.+|++||++.|++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1233458899999999999999999999986
No 326
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-33 Score=299.23 Aligned_cols=245 Identities=23% Similarity=0.360 Sum_probs=196.7
Q ss_pred ceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 504 KYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
...||+|+||.||++.. .+++.||+|++...... ..+.+.+|+.++++++|||++++++++..++..++||||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh---HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 35799999999999976 47899999988543322 245788999999999999999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+...........
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 9999987543 378899999999999999999999 999999999999999999999999999876654333334
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...|++.|+|||...+..++.++||||+|+++|+|++|+.||..... . .....+.......... ......
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~-----~----~~~~~~~~~~~~~~~~-~~~~~~ 244 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----L----KAMKMIRDNLPPKLKN-LHKVSP 244 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----H----HHHHHHHhhCCcccCC-cccCCH
Confidence 45688999999999888889999999999999999999999863211 1 1111111111111111 111223
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+.+++.+|++.+|.+||++.+++++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 47789999999999999999999997
No 327
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.3e-33 Score=290.80 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=199.1
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccc--hhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--cee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAET--EETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 573 (796)
.+|++.+.||+|+||.||+|.. .+++.||+|.+..... ......+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688999999999999999975 4689999998754321 1223356889999999999999999999998764 468
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+++++|.+++.+.. .+++.....++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987543 378888999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSD---SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
.... ........++..|+|||++.+..++.++|||||||++|+|++|+.||.... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~ 227 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE--------AMAAIFKIATQPTK 227 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC--------HHHHHHHHHcCCCC
Confidence 5321 111223458899999999988888999999999999999999999987321 11222222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.... .....+.+++.+|++ +|.+||++.+++.|
T Consensus 228 ~~~p~---~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 PMLPD---GVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCc---ccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 22211 222347889999999 57999999998875
No 328
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.4e-34 Score=306.60 Aligned_cols=267 Identities=23% Similarity=0.278 Sum_probs=199.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 571 (796)
.++|.+.+.||+|+||+||+|+. .+++.||||.+........ ....+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI-DAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccc-hhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 45799999999999999999965 4689999999875432222 235677899999999999999999988654 3
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|+||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 4799999996 68888887543 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCch----
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSD---- 716 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~---- 716 (796)
..............++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876543333334557889999998764 46889999999999999999999998642210 000000
Q ss_pred ----hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--Hhhc
Q 003780 717 ----QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE--FLTC 772 (796)
Q Consensus 717 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 772 (796)
...........................+.+++.+|++.+|++|||++|++++ ++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000000000000111111111223457899999999999999999999999 5443
No 329
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=335.07 Aligned_cols=257 Identities=28% Similarity=0.431 Sum_probs=205.9
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.+-+++....||.|.||.||.|. ..+|+..|+|-++-.... ....+.+.+|..++..++|||+|+++|+-.+.+..+|
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 45567778899999999999996 557999999988776655 4456789999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
.||||++|+|.+.+.... ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+.
T Consensus 1312 FMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEec
Confidence 999999999999997653 256666677889999999999999 99999999999999999999999999999876
Q ss_pred CCCCC----ccccccccCccCccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 656 SDSSN----RTIVAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 656 ~~~~~----~~~~~gt~~y~aPE~~~~~~---~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
.+... .....||+.|||||++.+.. ...++||||+|||+.||+||+.||...+. ..+.++ .+-...
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn------e~aIMy-~V~~gh 1458 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN------EWAIMY-HVAAGH 1458 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc------hhHHHh-HHhccC
Confidence 54322 12356999999999998654 44689999999999999999999874322 122222 222222
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.+...+. -..+=.+++..|++.||++|.++.|++++=..
T Consensus 1459 ~Pq~P~~----ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1459 KPQIPER----LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred CCCCchh----hhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 2222222 12234589999999999999999998887543
No 330
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.6e-33 Score=305.19 Aligned_cols=262 Identities=23% Similarity=0.284 Sum_probs=197.9
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK----- 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 570 (796)
..++|++.+.||+|+||.||+|.. .+|+.||+|.+....... ...+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-THAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-hHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 457899999999999999999975 479999999986543222 2245677899999999999999999988643
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
...++||||+.+ +|.+.+... ++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999965 888777542 78888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchhhh
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQKI 719 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~~~ 719 (796)
+++....... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||...+.. ..+......
T Consensus 164 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 164 LARTAGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred cceeCCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9987644322 22345788999999999999999999999999999999999998643210 000000000
Q ss_pred ----HHHHhhcCCCC---------------Ccc-chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 720 ----MLIDVLDSRLS---------------PPV-DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 720 ----~~~~~~~~~~~---------------~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
........+.. +.. ..........+.+++.+|++.||++|||+.|++++-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 00000110000 000 000011234578999999999999999999999884
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.4e-33 Score=294.30 Aligned_cols=247 Identities=26% Similarity=0.369 Sum_probs=198.6
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||.||++... +|+.+++|.+...........+.+.+|++++++++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999866 5999999999766554444567889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC------
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS------ 659 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------ 659 (796)
.+++.+.. .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998654 489999999999999999999999 999999999999999999999999999876443311
Q ss_pred --CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 660 --NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 660 --~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......++..|+|||...+..++.++||||||+++|+|++|+.||.... ...............+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~-- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--------PEEIFQNILNGKIEWPEDV-- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCCcCCCccc--
Confidence 2233457889999999988888999999999999999999999987322 1222222222222211110
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.+++.+|++.+|++|||+.++.+.++
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 225 -EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 01345789999999999999999955555544
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.1e-33 Score=300.30 Aligned_cols=261 Identities=27% Similarity=0.327 Sum_probs=197.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 574 (796)
.++|++.+.||+|+||.||+|..+ +|+.||+|++....... .....+.+|+.++++++|+||+++++++... +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 467999999999999999999754 69999999987554322 1123566899999999999999999998765 5689
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999975 7888877542 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC------
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS------ 727 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 727 (796)
...........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-----EQLDLIIQLLGTPNESIW 233 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCChhhc
Confidence 543333333346788999998865 45788999999999999999999998732211 000001110000
Q ss_pred ----------C--CCCc-cc---hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 ----------R--LSPP-VD---RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ----------~--~~~~-~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
. .... .. .........+.+++.+|++.||++|||+.|++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0 0000 00 000011334678999999999999999999998743
No 333
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.3e-33 Score=292.07 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=188.0
Q ss_pred eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHH-hhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVL-SKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|.. .+|+.||+|.+.............+..|..++ ...+|||++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999975 46899999998765433222233445555544 455899999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999997643 378899999999999999999998 999999999999999999999999999875432 22
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHH
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIV 742 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (796)
...+++.|+|||...+..++.++||||+|+++|+|++|..||.... .................. .......
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~ 222 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET--------PDAVFDNILSRRINWPEE-VKEFCSP 222 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcccCCCCc-ccccCCH
Confidence 3458889999999988888999999999999999999999986321 111122222211111110 0111234
Q ss_pred HHHHHHHHcCCCCCCCCCCHHHHHH
Q 003780 743 LVTTVALACLHSKPKFRPTMQRVCQ 767 (796)
Q Consensus 743 ~l~~li~~cl~~dP~~RPs~~evl~ 767 (796)
.+.+++.+|++.+|++||++.++.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHH
Confidence 5789999999999999997754433
No 334
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=310.58 Aligned_cols=311 Identities=26% Similarity=0.267 Sum_probs=284.9
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEE
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVL 150 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 150 (796)
.++++.|+|.+|.+.. +....++.++.|+.||||.|.|+.+.-..|..-.++++|+|++|.|+....+.|.+|.+|..|
T Consensus 124 sghl~~L~L~~N~I~s-v~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tl 202 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISS-VTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTL 202 (873)
T ss_pred ccceeEEeeecccccc-ccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheee
Confidence 4688999998887764 455568999999999999999998888889888999999999999999999999999999999
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
.|+.|+++...+..|.+|++|+.|+|..|+|.-..--.|.+|++|+.|.|..|.++......|-.+.++++|+|..|+++
T Consensus 203 kLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 203 KLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred ecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 99999999888899999999999999999999666789999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
..-.+++.+|++|+.|+|+.|.|..+-++.+.-..+|+.|+||+|+|+...+.+|..+..|+.|+|++|.++......|.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 88889999999999999999999988889888899999999999999999999999999999999999999988888999
Q ss_pred cccccceecccccccccCCCc---ccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccccc
Q 003780 311 GLISLKGLDLSNNKLSGPIPP---EIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFLYH 382 (796)
Q Consensus 311 ~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~ 382 (796)
++.+|+.|||++|.|+..+.+ .|..+++|+.|.|.+|+|....-..+ ++..|++|||.+|.|...-|..+.+
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~ 438 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEP 438 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccccccc
Confidence 999999999999999876654 57889999999999999995444444 7999999999999998766765543
No 335
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.6e-33 Score=291.64 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=193.7
Q ss_pred HHHHHHHhcCCccceee--ecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeE
Q 003780 491 FEDIIKATEDFDIKYCI--GTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGF 566 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 566 (796)
..+.....+.|++.+.+ |+|+||.||+++. .+++.+|+|.+....... . |+.....+ +||||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEEE
Confidence 34555566778887776 9999999999975 468899999987543221 1 22222222 69999999999
Q ss_pred EEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEE
Q 003780 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFV 645 (796)
Q Consensus 567 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl 645 (796)
+..++..++||||+++++|.+++.+.. .+++..+..++.|+++||.|||+. +++||||||+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999997653 489999999999999999999999 999999999999999998 9999
Q ss_pred eeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 646 ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
+|||.++...... ...++..|+|||++.+..++.++||||+|+++|||++|+.||...... ...........
T Consensus 152 ~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~ 223 (267)
T PHA03390 152 CDYGLCKIIGTPS----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE----ELDLESLLKRQ 223 (267)
T ss_pred ecCccceecCCCc----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc----hhhHHHHHHhh
Confidence 9999987654322 235889999999999888999999999999999999999998732211 00011111111
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT-MQRVCQE 768 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 768 (796)
..... . .......+.+++.+|++.+|++||+ ++|++++
T Consensus 224 ~~~~~--~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 QKKLP--F---IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCC--c---ccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 11111 1 1123345789999999999999996 6998865
No 336
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1e-33 Score=305.96 Aligned_cols=265 Identities=25% Similarity=0.295 Sum_probs=199.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----cce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----KKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~ 572 (796)
.++|++.+.||+|++|.||+|.. .+|+.||+|++....... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-TLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-cchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 46899999999999999999975 469999999987653322 224567889999999999999999998763 346
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++|+||+. |+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 899999996 58988886543 389999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCCC----ccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCc--
Q 003780 653 LLDSDSSN----RTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSS-- 715 (796)
Q Consensus 653 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~-- 715 (796)
........ .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 65432211 123468889999998765 458899999999999999999999996432110 0000
Q ss_pred ---hhhhHHHH---hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 716 ---DQKIMLID---VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 716 ---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
........ ....................+.+++.+|++.+|++||++++++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 00000000 01111111111111223456889999999999999999999999753
No 337
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.6e-33 Score=296.66 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=203.5
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV 576 (796)
++|.+.+.||+|++|.||+|..+ +|+.||+|++...........+.+..|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999754 79999999997654433333567889999999998 99999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.+.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998653 489999999999999999999998 999999999999999999999999999986544
Q ss_pred CCC--------------------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCch
Q 003780 657 DSS--------------------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSD 716 (796)
Q Consensus 657 ~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~ 716 (796)
... ......++..|+|||...+..++.++||||+|++++++++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------- 226 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-------- 226 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--------
Confidence 321 1122357889999999988888999999999999999999999987332
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTM----QRVCQE 768 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~ 768 (796)
...............+ ......+.+++.+|++.+|++||++ ++++++
T Consensus 227 ~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 227 EYLTFQKILKLEYSFP-----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHHHHhcCCCCC-----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1122222222111111 1112347799999999999999999 676654
No 338
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-34 Score=277.89 Aligned_cols=266 Identities=22% Similarity=0.313 Sum_probs=203.3
Q ss_pred cHHHHHHHhcCCccceeeecccceeEEEE-EccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEE
Q 003780 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFC 567 (796)
Q Consensus 490 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~ 567 (796)
+|+|+.+.++ +.||+|+|+.|-.+ .+.+|.+||||++.+...- ..+.+.+|++++.+.+ |+||++++++|
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gH---sR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGH---SRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCch---HHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 3677766665 57999999999988 4778999999999877432 3468899999999996 99999999999
Q ss_pred EecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cEE
Q 003780 568 LHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EAF 644 (796)
Q Consensus 568 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~k 644 (796)
+++..+|+|||.|.||+|.++++++.. +++.++.++.++||.||.+||.+ ||.|||+||+|||..... -+|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 999999999999999999999987643 89999999999999999999999 999999999999997654 479
Q ss_pred EeeeccccccCCCC-------CCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccc--C
Q 003780 645 VADFGTARLLDSDS-------SNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSS--L 710 (796)
Q Consensus 645 l~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~--~ 710 (796)
||||.++..+.... ......+|+..|||||+.. ...|+.+.|.||+|||+|-|+.|..||...-. .
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99999876543211 1123467889999999753 34588899999999999999999999974321 1
Q ss_pred CCCC----chhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 711 SSPS----SDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 711 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.+.. ..-+..+.+.+........+........+..+++...+..||.+|-++.+++.+-
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 1111 1112223333333322111111122223466788899999999999999999853
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.3e-33 Score=305.47 Aligned_cols=261 Identities=23% Similarity=0.351 Sum_probs=194.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH--QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999964 4789999999864322 223456788999999999999999999876543
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|+||+++ ++.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 57999999975 787777543 388999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC---ccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchh
Q 003780 652 RLLDSDSSN---RTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQ 717 (796)
Q Consensus 652 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~ 717 (796)
......... .....|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||...... ..+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 765432211 123468899999998654 56888999999999999999999998642210 0000000
Q ss_pred hhHH-----HHhh---cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 718 KIML-----IDVL---DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 718 ~~~~-----~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .... ......+...........+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0000 0000000000011123457899999999999999999999998
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.9e-33 Score=294.17 Aligned_cols=256 Identities=26% Similarity=0.363 Sum_probs=200.1
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|++.+.||+|++|.||+|... +++.+++|++....... .....+..|++++++++||||+++++++..+...++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 567789999999999999764 78999999987654432 2346788899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+++ ++.+++.... ..+++..+..++.|+++||.|||+. +|+|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 976 8888876542 3489999999999999999999999 999999999999999999999999999987655432
Q ss_pred CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC-----------
Q 003780 660 NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS----------- 727 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 727 (796)
......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... .........+..
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-----DQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHcCCCchHhcccchh
Confidence 23334578889999998776 7889999999999999999999998642211 000000000000
Q ss_pred -----------CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 -----------RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 -----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
................+.+++.+|+++||.+||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000111111234568899999999999999999999875
No 341
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.9e-33 Score=292.73 Aligned_cols=253 Identities=23% Similarity=0.269 Sum_probs=191.7
Q ss_pred CccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEec--ceeeEE
Q 003780 501 FDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHK--KCMFLI 576 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~lV 576 (796)
|++.+.||+|+||.||+|.. .+++.||+|+++........ ....+|+.++.++. |||++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~--~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ--VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh--hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 66788999999999999975 46899999998765332221 23457888898885 99999999999987 899999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.+.....
T Consensus 79 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMDM-NLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCCc-cHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999974 7877776532 3489999999999999999999999 9999999999999999 9999999999987643
Q ss_pred CCCCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH-----------h
Q 003780 657 DSSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID-----------V 724 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~ 724 (796)
... .....++..|+|||+.. +..++.++||||+||++|||++|+.||...+.. .......+ .
T Consensus 152 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 152 KPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-----DQIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred CCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-----HHHHHHHHHcCCCCHHHHHh
Confidence 322 22345788999999764 455788999999999999999999998643211 00000000 0
Q ss_pred hcCC------CCCc----cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSR------LSPP----VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~------~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .... ...........+.+++.+|++++|++||++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000 0000 000011224568899999999999999999999876
No 342
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.6e-33 Score=292.23 Aligned_cols=256 Identities=27% Similarity=0.337 Sum_probs=196.2
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc---CCCceeeEEeEEEecce----
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI---AHRNIVKLYGFCLHKKC---- 572 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~---- 572 (796)
|++.+.||+|+||.||+|+.+ +++.||+|++......+ .....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 667889999999999999876 58999999997654432 2234566788777666 59999999999988776
Q ss_pred -eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 573 -MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 573 -~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
.+++|||+.+ +|.+++..... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 9999999975 79888876432 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh-------
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV------- 724 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------- 724 (796)
........ .....++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+.+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 155 RIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-----DQLDKIFDVIGLPSEE 228 (287)
T ss_pred eeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-----HHHHHHHHHcCCCChH
Confidence 87643322 22334788999999999988999999999999999999999998743210 000001000
Q ss_pred ------------hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 ------------LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...................+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00011111111111223457789999999999999999999865
No 343
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.5e-34 Score=279.66 Aligned_cols=267 Identities=24% Similarity=0.298 Sum_probs=199.0
Q ss_pred hcCCccceeeecccceeEEEEEcc---C--CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-cc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP---N--GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-KK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~---~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 571 (796)
...|+....||+|+||.||+|..+ + .+.+|+|+++..+.... .-....+|+..++.++||||+.+..++.+ +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 357889999999999999999533 2 33799999987755432 23467789999999999999999998877 78
Q ss_pred eeeEEEeeccCCcHHHHHhhc--CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC----CcEEE
Q 003780 572 CMFLIYKYMKRGSLFCFLRND--YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFV 645 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl 645 (796)
..++++||.+. +|++.++-+ .....++...+..|+.||+.|+.|||++ -|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 99999999988 888888643 3345789999999999999999999999 89999999999999887 89999
Q ss_pred eeeccccccCCCCC---CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccC----CCCCchh
Q 003780 646 ADFGTARLLDSDSS---NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSL----SSPSSDQ 717 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----~~~~~~~ 717 (796)
+|+|+++.+...-. ....++-|.+|+|||.+.|. .|+.+.|||+.||++.||+|-.+-|.....- ......+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 99999998765422 23446689999999998876 4888999999999999999977665422110 0001111
Q ss_pred hhHHHHhhcCCCC---------Cccchhh--------------------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 718 KIMLIDVLDSRLS---------PPVDRMV--------------------MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 718 ~~~~~~~~~~~~~---------~~~~~~~--------------------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...+.+++...-. ++..... ......-.+++.++|+.||.+|.|+++.+++
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 1112111111100 0000000 0001125678999999999999999999998
Q ss_pred H
Q 003780 769 F 769 (796)
Q Consensus 769 L 769 (796)
.
T Consensus 338 ~ 338 (438)
T KOG0666|consen 338 P 338 (438)
T ss_pred c
Confidence 5
No 344
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.7e-33 Score=295.61 Aligned_cols=256 Identities=24% Similarity=0.343 Sum_probs=196.4
Q ss_pred hcCCccceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|++|.||+|..++ ++.||||++........ ...+..|+.++.+.. ||||+++++++......++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE--NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH--HHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 3578889999999999999998764 89999999976543322 345666777676665 9999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+.+ ++.++..... ..+++..+.+++.|+++||+|||+.+ +|+||||+|+||+++.++.+||+|||++..+.
T Consensus 92 v~e~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 92 CMELMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EeeccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9999854 6777665432 25889999999999999999999732 89999999999999999999999999997654
Q ss_pred CCCCCccccccccCccCccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.... .........+......
T Consensus 167 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~ 238 (296)
T cd06618 167 DSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-------TEFEVLTKILQEEPPS 238 (296)
T ss_pred CCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch-------hHHHHHHHHhcCCCCC
Confidence 3222 22234788999999987553 7889999999999999999999986311 1112222222222111
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... .......+.+++.+|++.||++||++.+++++-.
T Consensus 239 -~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 239 -LPP-NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred -CCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 110 0112345789999999999999999999998853
No 345
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.9e-33 Score=300.24 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=196.6
Q ss_pred HHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-cce
Q 003780 495 IKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-KKC 572 (796)
Q Consensus 495 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 572 (796)
..++++|++.+.||+|+||.||+|..+ +++.||+|++....... ...+.+..|++++++++||||+++.+++.. ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-VLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 346788999999999999999999644 79999999886543222 224577889999999999999999999876 457
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++|+||+ +++|.++++.. .+++.....++.|+++||+|||+. +|+||||+|+||+++.++.++|+|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 88999998 45888887643 367888889999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCch-----
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSD----- 716 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~----- 716 (796)
..... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... .....
T Consensus 157 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 157 IQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred ccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 54322 122357888999998765 568899999999999999999999986322100 00000
Q ss_pred ---hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 ---QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...............+...........+.+++.+|++.+|++||++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000001111011123458899999999999999999999988
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.3e-33 Score=298.55 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=192.4
Q ss_pred eeeecc--cceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 505 YCIGTG--GYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 505 ~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
..||+| +||+||++.. .+|+.||+|++....... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 9999999975 479999999987654433 235788999999999999999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 661 (796)
+|++.+++.+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999886532 2478899999999999999999998 99999999999999999999999998654332211111
Q ss_pred -------cccccccCccCccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC----
Q 003780 662 -------TIVAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR---- 728 (796)
Q Consensus 662 -------~~~~gt~~y~aPE~~~~~--~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 728 (796)
....++..|+|||++.+. .++.++||||+||++|||++|+.||...... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~ 230 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--------QMLLQKLKGPPYSP 230 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--------HHHHHHhcCCCCCC
Confidence 112345679999998763 4788999999999999999999998743210 0000000000
Q ss_pred ------------------------------------CC-Cc-cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 ------------------------------------LS-PP-VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 ------------------------------------~~-~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. .. ...........+.+++.+||+.||++|||++|++++-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 00 00 00001123446889999999999999999999998753
No 347
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-33 Score=318.02 Aligned_cols=266 Identities=20% Similarity=0.231 Sum_probs=187.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc--CCcEEEEEEe--------------ccccchhhHHHHHHHHHHHHHhhcCCCce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP--NGKVVALKKL--------------HRAETEETTFFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~--------------~~~~~~~~~~~~~~~~E~~~l~~l~hpni 560 (796)
..++|++.+.||+|+||+||++..+ .+..++.|.+ .+...........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998643 2222222211 11111112234568899999999999999
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHHHHhhcCc--ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYE--AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 638 (796)
+++++++..++..++|+|++.+ ++.+++..... ...........++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999864 67776654321 11234566778999999999999999 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCC-CcccccCCCCCch
Q 003780 639 SKLEAFVADFGTARLLDSDSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP-GELLSSLSSPSSD 716 (796)
Q Consensus 639 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p-~~~~~~~~~~~~~ 716 (796)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|..+ +...... ...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~---~~~ 378 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK---PGK 378 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC---HHH
Confidence 999999999999987654322 22335699999999999999999999999999999999998854 3321100 000
Q ss_pred hhhH------------------HHHhhcCCCCC----ccchhh--HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 717 QKIM------------------LIDVLDSRLSP----PVDRMV--MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 717 ~~~~------------------~~~~~~~~~~~----~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+... ..+.+...... ...... ......+.+++.+||+.||++|||+.|++++-
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp 455 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALP 455 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence 0000 00111000000 000000 00112366788999999999999999999874
No 348
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.1e-33 Score=295.85 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=199.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
..|+..+.||+|+||.||+|+.. +++.+|+|.+...........+++.+|+++++.++|||++++.+++..+...++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999754 68899999987543333333567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+. |++.+.+.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9997 57877775432 2478899999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 658 SSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
....+++.|+|||.+. ...++.++|||||||++|+|++|+.||.... ..................
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~ 236 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPALQS 236 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc--------HHHHHHHHhhcCCCCcCc
Confidence 2345788999999874 3567889999999999999999999976321 111111122221111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
......+.+++.+||+.+|++||++.+++++.....
T Consensus 237 ---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 237 ---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 122344778999999999999999999999976554
No 349
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.5e-33 Score=296.67 Aligned_cols=259 Identities=24% Similarity=0.320 Sum_probs=193.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|++.+.||+|+||.||+|..+ +++.||+|.+........ ....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC-chhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 457999999999999999999754 689999999865443221 1235678999999999999999999987654
Q ss_pred ---eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 572 ---CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 572 ---~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
..++||||+.+ ++.+.+.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 45999999975 7887776532 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC----ccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 649 GTARLLDSDSSN----RTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 649 g~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|.+......... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ......+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~-----~~~~~~~~~ 238 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE-----QHQLTLISQ 238 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHH
Confidence 999866432211 1234577889999987654 368899999999999999999999863221 000000000
Q ss_pred hhcC------------------CCCCccchhhH------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 VLDS------------------RLSPPVDRMVM------QDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 ~~~~------------------~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... ........... .....+.+++.+|++.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 00000000000 012346789999999999999999999876
No 350
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.3e-33 Score=293.58 Aligned_cols=260 Identities=18% Similarity=0.235 Sum_probs=182.6
Q ss_pred hcCCccceeeecccceeEEEEEccC----CcEEEEEEeccccchhhH---H-----HHHHHHHHHHHhhcCCCceeeEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETT---F-----FNSFQNEAHVLSKIAHRNIVKLYG 565 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~---~-----~~~~~~E~~~l~~l~hpniv~l~~ 565 (796)
.++|.+.+.||+|+||.||+|...+ +..+|+|+.......... . ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999997654 455666654322211000 0 011223344556678999999999
Q ss_pred EEEecc----eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC
Q 003780 566 FCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL 641 (796)
Q Consensus 566 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 641 (796)
++.... ..++++|++.. ++.+.+.... ..++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 876543 34677777644 5655555432 256778899999999999999999 999999999999999999
Q ss_pred cEEEeeeccccccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCC
Q 003780 642 EAFVADFGTARLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPS 714 (796)
Q Consensus 642 ~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~ 714 (796)
.++|+|||+|+.+..... ......||+.|+|||+..+..++.++||||+||++|||++|+.||..........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643211 1123469999999999999999999999999999999999999997542210000
Q ss_pred chhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 715 SDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..........+..... ... .....+.+++..|++.+|++||++.++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKI-KIK----NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhh-ccC----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0000111111111100 011 1124477999999999999999999999876
No 351
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.6e-33 Score=299.44 Aligned_cols=288 Identities=23% Similarity=0.315 Sum_probs=209.2
Q ss_pred CCccceeeecccceeEEEEEcc-C--CcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec----c
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-N--GKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK----K 571 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~----~ 571 (796)
+|++.+.||+|+||.||+++.. . +..||+|++...... ....+.+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4788899999999999999754 3 789999998754322 12245678899999999 499999999976433 4
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++++||+. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5788888886 58988886543 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCch
Q 003780 652 RLLDSDSS----NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSD 716 (796)
Q Consensus 652 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~ 716 (796)
........ ......|++.|+|||+..+ ..++.++||||+||++|+|++|+.||....... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 86543221 1223458899999998765 468899999999999999999999987432100 00000
Q ss_pred hhh--------HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--h---------hcCcccc
Q 003780 717 QKI--------MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF--L---------TCKIALV 777 (796)
Q Consensus 717 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L--~---------~~~~~~~ 777 (796)
... ........................+.+++.+|++.||++|||+.|++++= . .+...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFD 312 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcccccccccccc
Confidence 000 00000000000011111111234588999999999999999999998873 1 1334455
Q ss_pred Cccc-cccHHHHhhhhccC
Q 003780 778 NPFE-EISIWQLRNQINTT 795 (796)
Q Consensus 778 ~~~~-~~~~~~~~~~~~~~ 795 (796)
.+|+ |.+.++.|++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~ 331 (332)
T cd07857 313 FSFESEDSMEELRDMIIEE 331 (332)
T ss_pred CCccccccHHHHHHHHhhc
Confidence 5666 77788889999876
No 352
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.7e-32 Score=293.55 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=195.4
Q ss_pred CccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|...+.||+|+||.||+|+. .+|+.|++|++...........+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66677899999999999975 46899999998765444334456788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+. |++.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 57777776432 3488999999999999999999999 999999999999999999999999999864322
Q ss_pred CccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 660 NRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.....|+..|+|||++. ...++.++|||||||++|+|++|..||..... ..................
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~- 243 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNDSPTLQSN- 243 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcCCCCCCcc-
Confidence 22345888999999974 45678899999999999999999999863221 111111111111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.+|++||++.+++++-
T Consensus 244 --~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 244 --EWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred --ccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1122477899999999999999999999874
No 353
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7e-33 Score=295.31 Aligned_cols=261 Identities=29% Similarity=0.362 Sum_probs=197.1
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc---
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK--- 571 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 571 (796)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++....... ....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-FPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-chHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 35678999999999999999999765 689999999976543221 2346778999999999999999999987654
Q ss_pred -------eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 572 -------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 572 -------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
..++|+||+++ ++...+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 676666543 23489999999999999999999999 999999999999999999999
Q ss_pred EeeeccccccCCCCC-CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 645 VADFGTARLLDSDSS-NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
|+|||.+........ ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ......+.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-----~~~~~~~~ 231 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-----LAQLELIS 231 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHH
Confidence 999999987654332 1222346778999998764 3578899999999999999999999873221 11111111
Q ss_pred HhhcCCCCC----------------------ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 723 DVLDSRLSP----------------------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 723 ~~~~~~~~~----------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
......... ............+.+++.+|++.||.+||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111000000 0000000113458899999999999999999999875
No 354
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.4e-33 Score=292.24 Aligned_cols=256 Identities=28% Similarity=0.368 Sum_probs=196.6
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeEEE
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFLIY 577 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lV~ 577 (796)
|++.+.||+|++|.||+|... +++.+|+|++..... .....+.+.+|++++++++|||++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE-KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 667889999999999999765 589999999987642 222345788999999999999999999999988 8999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++ +|.+++.+.. ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99985 8888886542 3588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC-------
Q 003780 658 SS-NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR------- 728 (796)
Q Consensus 658 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 728 (796)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+..... .....+.......
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-----EQLEKIFELCGSPTDENWPG 228 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCchhhccc
Confidence 21 1223456788999997764 45788999999999999999999998743210 0000010000000
Q ss_pred -----------CCCccc----hhhHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 729 -----------LSPPVD----RMVMQ-DIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 729 -----------~~~~~~----~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...... ..... ....+.+++.+|++.+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000 00001 13457899999999999999999999875
No 355
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.7e-33 Score=299.84 Aligned_cols=267 Identities=24% Similarity=0.288 Sum_probs=199.5
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
.+++...+++|++.+.||+|+||.||+|.. ++++.||+|++....... ...+.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh-HHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 456667889999999999999999999964 579999999997643322 224567889999999999999999998864
Q ss_pred c------ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcE
Q 003780 570 K------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 570 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 3 3467888876 77998877643 388999999999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC----------
Q 003780 644 FVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS---------- 712 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~---------- 712 (796)
||+|||+++.... ......++..|+|||...+ ..++.++||||+||++|||++|+.||........
T Consensus 160 kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 160 KILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred EEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999876432 2223457889999998766 4678899999999999999999999863221000
Q ss_pred CC--------chhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 713 PS--------SDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 713 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. ..........+..................+.+++.+|++.||++||++.+++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 00 0000000000111111111110011233578999999999999999999999884
No 356
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1e-32 Score=290.12 Aligned_cols=246 Identities=22% Similarity=0.222 Sum_probs=187.8
Q ss_pred eeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHH---HHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 506 CIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEA---HVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
.||+|+||.||+|... +++.||+|.+.............+..|. +.++...||+|+++.+++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3799999999999754 6899999998765433222112233343 34445579999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 661 (796)
+|+|.+++.+.. .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~ 152 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--C
Confidence 999999887543 489999999999999999999998 99999999999999999999999999987654322 2
Q ss_pred cccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHH
Q 003780 662 TIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQD 740 (796)
Q Consensus 662 ~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (796)
....|+..|+|||.+.++ .++.++||||+||++|||++|+.||...... .......... ........ ..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~~~~---~~ 222 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK------DKHEIDRMTL-TMAVELPD---SF 222 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc------chHHHHHHhh-ccCCCCCC---cC
Confidence 234689999999998754 5889999999999999999999998743211 0111111111 11111111 11
Q ss_pred HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 741 IVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 741 ~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
...+.+++.+|+..+|.+|| ++.|++++-
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 23478899999999999999 999998753
No 357
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8.9e-33 Score=296.22 Aligned_cols=253 Identities=19% Similarity=0.244 Sum_probs=190.6
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCC
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRG 583 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g 583 (796)
.+.+|.|+++.||++.. +++.||+|++....... ...+.+.+|++++++++||||+++++++..++..+++|||+++|
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSK-EDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccch-hHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 33445555555555544 69999999997653322 23568999999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC----
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS---- 659 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~---- 659 (796)
+|.+++.+... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 85 SCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 99999986533 3478888999999999999999999 999999999999999999999999998875532211
Q ss_pred ---CccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC------
Q 003780 660 ---NRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR------ 728 (796)
Q Consensus 660 ---~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 728 (796)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ....+.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~ 232 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--------QMLLEKVRGTVPCLLD 232 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccCccccc
Confidence 1122346778999999865 35788999999999999999999998743211 0000000000
Q ss_pred ----------------------CCC-ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 ----------------------LSP-PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 ----------------------~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... ............+.+++.+||+.||++|||++|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000 000011122345788999999999999999999999854
No 358
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.9e-33 Score=302.95 Aligned_cols=263 Identities=30% Similarity=0.399 Sum_probs=196.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEec--ce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHK--KC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~--~~ 572 (796)
..++|++.+.||+|+||.||+|... +|+.+|+|++........ ....+.+|+.+++++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-DAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-hhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4568999999999999999999765 688999999865432222 234677899999999 999999999998654 36
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||++ ++|.+++.+. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 899999997 4898888653 478889999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC-----CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCch
Q 003780 653 LLDSDSS-----NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSD 716 (796)
Q Consensus 653 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~ 716 (796)
....... ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6543321 1223458899999998754 457889999999999999999999986322110 00000
Q ss_pred hh-----hHHHHhhc---CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 QK-----IMLIDVLD---SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 ~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.. ......++ .................+.+++.+|++.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00000010 000000011011123457899999999999999999999987
No 359
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-32 Score=291.06 Aligned_cols=254 Identities=26% Similarity=0.341 Sum_probs=196.3
Q ss_pred CCccceeeecccceeEEEEEc----cCCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhc-CCCceeeEEeEEEeccee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 573 (796)
+|++.+.||+|+||.||++.. .+|+.||+|++....... ....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999965 368999999987643322 22245678899999999 599999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+++++|.+++.... .+++..+..++.|+++||.|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999987643 378888899999999999999998 999999999999999999999999999986
Q ss_pred cCCCCC-CccccccccCccCccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSS-NRTIVAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
...... ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||..... ................
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~~~- 229 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEP- 229 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhccCC-
Confidence 543321 12234588899999998753 467899999999999999999999863211 1111112222222111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 768 (796)
+ .. ......+.+++.+|++.||++|| ++.+++.+
T Consensus 230 ~-~~---~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 230 P-YP---QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred C-CC---ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 1 11 11223477899999999999997 66666554
No 360
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=275.29 Aligned_cols=257 Identities=23% Similarity=0.306 Sum_probs=201.5
Q ss_pred HhcCCccc-eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe----
Q 003780 497 ATEDFDIK-YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH---- 569 (796)
Q Consensus 497 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~---- 569 (796)
.+++|++. ++||-|-.|.|-.+.. .+|+.+|+|++.... ..++|++..-.. .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45667664 5799999999999854 479999999886442 457788876666 49999999998864
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEe
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVA 646 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~ 646 (796)
.+...+|||.|+||.|++.+++.+. ..+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+. +..+|++
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 4578899999999999999987643 4589999999999999999999999 9999999999999975 4568999
Q ss_pred eeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc
Q 003780 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD 726 (796)
Q Consensus 647 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (796)
|||+|+.-.. .......+.||.|.|||++....|+...|+||+||++|-|++|.+||+........ ..+...+..
T Consensus 207 DfGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais----pgMk~rI~~ 281 (400)
T KOG0604|consen 207 DFGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKRRIRT 281 (400)
T ss_pred ccccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC----hhHHhHhhc
Confidence 9999986543 23345577899999999999999999999999999999999999999854432111 112222222
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 727 SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 727 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.....+ ............++|+.+|..+|.+|.|+.|++.+-.-
T Consensus 282 gqy~FP-~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 282 GQYEFP-EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred cCccCC-ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 222111 11123334457789999999999999999999998653
No 361
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-34 Score=305.12 Aligned_cols=201 Identities=31% Similarity=0.451 Sum_probs=175.1
Q ss_pred CccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc------ee
Q 003780 501 FDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK------CM 573 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~~ 573 (796)
|...+.||+|+||.||+|+ .+.|+.||||.++...... ..+...+|++++++++|||||++++.-+... ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r--~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR--PRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccc--hHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4556789999999999998 4579999999998865432 2467889999999999999999999765433 56
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec--CCCc--EEEeeec
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN--SKLE--AFVADFG 649 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~~--~kl~Dfg 649 (796)
.+|||||.+|||+..+.+......+++.+.+.+..+++.||.|||++ +|+||||||.||++- ++|+ -||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999999887777899999999999999999999998 999999999999984 3343 5899999
Q ss_pred cccccCCCCCCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccc
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELL 707 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~ 707 (796)
.|+.++++. ......||..|.+||+.. ...|+..+|.|||||++|+.+||..||...
T Consensus 170 ~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 170 AARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 999887654 455678999999999998 588999999999999999999999999854
No 362
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.3e-33 Score=300.85 Aligned_cols=261 Identities=24% Similarity=0.310 Sum_probs=200.3
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----ee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-----CM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 573 (796)
+|++.+.||.|++|.||+|+.. +++.||+|++...... ....+.+.+|+++++.++||||+++.+++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5788999999999999999765 5899999998765421 223467899999999999999999999998775 78
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++ +|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999999984 8888887543 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC---CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCch---
Q 003780 654 LDSDS---SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSD--- 716 (796)
Q Consensus 654 ~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~--- 716 (796)
..... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||....... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65443 122334578899999999887 78899999999999999999999986432100 00000
Q ss_pred --hhhHHHHhhc---CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 --QKIMLIDVLD---SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 --~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
........+. .................+.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000000 000000000111123457899999999999999999999997
No 363
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.7e-32 Score=290.11 Aligned_cols=257 Identities=25% Similarity=0.304 Sum_probs=199.4
Q ss_pred CCccceeeecccceeEEEEEc----cCCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhc-CCCceeeEEeEEEeccee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 573 (796)
+|++.+.||+|++|.||+++. .+++.||||.+....... ....+.+.+|++++.++ +||||+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999863 357889999987543321 22345788999999999 599999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.... .+++..+..++.|+++||.|||+. +++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987543 378889999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-ccccccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSSN-RTIVAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
....... .....|+..|+|||...+.. .+.++||||||+++|||++|+.||...... ...............
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~- 229 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKSKP- 229 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHccCC-
Confidence 5433221 22345888999999987655 678999999999999999999998632211 111111112222111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
+.. ......+.+++.+|++.||++|||+.++.+.++-
T Consensus 230 ~~~----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 230 PFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCC----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 111 1122347789999999999999998888776654
No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.5e-32 Score=284.07 Aligned_cols=239 Identities=27% Similarity=0.349 Sum_probs=196.0
Q ss_pred eecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|+||.||++... +++.+|+|.+...........+.+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 5899999998876554444456889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVA 665 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 665 (796)
.+++.... .+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++|+|||.+..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99997653 388999999999999999999998 999999999999999999999999999987654433334456
Q ss_pred cccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHH
Q 003780 666 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVT 745 (796)
Q Consensus 666 gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 745 (796)
++..|+|||...+...+.++|+||||+++|+|++|+.||.... ...............+ . .....+.
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~--~---~~~~~l~ 221 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED--------RKEIYEKILKDPLRFP--E---FLSPEAR 221 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHhcCCCCCC--C---CCCHHHH
Confidence 8889999999988888899999999999999999999986321 1222222222222111 1 1123477
Q ss_pred HHHHHcCCCCCCCCCCHHH
Q 003780 746 TVALACLHSKPKFRPTMQR 764 (796)
Q Consensus 746 ~li~~cl~~dP~~RPs~~e 764 (796)
+++.+|+..||++||++++
T Consensus 222 ~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCCHhhCCCccc
Confidence 8999999999999999954
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9.6e-33 Score=287.44 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=196.8
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchh--hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEE--TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
+|.+.+.||+|+||.||++... .+..+++|.++.....+ .....++..|+.++++++||||+++++++..+...++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999654 34556666655432211 11123567889999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
+||+++++|.+++.+.. ....+++..+..++.|+++|+.|||+. +++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999887532 234589999999999999999999998 9999999999999976 569999999998765
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
..........|++.|+|||...+..++.++||||||+++|+|++|..||.... ............ .+..
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~-- 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--------FLSVVLRIVEGP-TPSL-- 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCC-CCCC--
Confidence 44333344568889999999888888899999999999999999999986321 111222222211 1111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.......+.+++.+|++.+|++||++.|++++
T Consensus 226 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 226 -PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 12223457889999999999999999999986
No 366
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-32 Score=298.50 Aligned_cols=258 Identities=25% Similarity=0.331 Sum_probs=194.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|...+.||+|+||.||+|.. .+|+.||+|++......+ .....+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-cchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 47899999999999999999975 468999999987643322 22356789999999999999999999987543
Q ss_pred -eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
..++|+||+.. ++.++.. ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46899999964 6766542 2378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH------
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID------ 723 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 723 (796)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~ 235 (342)
T cd07879 164 ARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-----DQLTQILKVTGVPG 235 (342)
T ss_pred CcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCC
Confidence 8765322 223457889999999876 46888999999999999999999999742210 00000000
Q ss_pred --------------hhcC--CC-CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HhhcC
Q 003780 724 --------------VLDS--RL-SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE--FLTCK 773 (796)
Q Consensus 724 --------------~~~~--~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 773 (796)
.... .. ..............+.+++.+|++.||++||+++|++++ ++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 00 000000001122347799999999999999999999977 55443
No 367
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.5e-32 Score=297.24 Aligned_cols=261 Identities=25% Similarity=0.266 Sum_probs=195.6
Q ss_pred hcCCcc-ceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhH-----------HHHHHHHHHHHHhhcCCCceeeEE
Q 003780 498 TEDFDI-KYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETT-----------FFNSFQNEAHVLSKIAHRNIVKLY 564 (796)
Q Consensus 498 ~~~~~~-~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~l~ 564 (796)
.++|.. .+.||+|+||+||+|..+ +++.||+|.+......... ....+.+|++++++++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345654 567999999999999754 6999999998654332200 112477899999999999999999
Q ss_pred eEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 565 GFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 565 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
+++..++..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++||||+|+||+++.++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 99999999999999997 58988886533 388899999999999999999998 999999999999999999999
Q ss_pred EeeeccccccCCC--------------CCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 003780 645 VADFGTARLLDSD--------------SSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSS 709 (796)
Q Consensus 645 l~Dfg~a~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~ 709 (796)
++|||.+...... ........+++.|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999765411 1111223467889999998764 468899999999999999999999874321
Q ss_pred CCCCCchhhhHHHHhhcCC--------------------CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 710 LSSPSSDQKIMLIDVLDSR--------------------LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .....+....... ...............+.+++.+|++.+|++||+++|++.+-
T Consensus 240 ~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 240 I-----DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred H-----HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 1 0000111100000 00000000111234578999999999999999999999874
Q ss_pred h
Q 003780 770 L 770 (796)
Q Consensus 770 ~ 770 (796)
.
T Consensus 315 ~ 315 (335)
T PTZ00024 315 Y 315 (335)
T ss_pred c
Confidence 3
No 368
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.5e-32 Score=289.87 Aligned_cols=260 Identities=24% Similarity=0.361 Sum_probs=195.6
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEe
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e 578 (796)
|++.+.||+|++|+||+|... +++.||+|++........ .....+|+..+++++ |||++++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh--HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 667889999999999999865 588999999876543221 224457899999999 9999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+ +|+|.+++.... ...+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 789998887653 23489999999999999999999998 99999999999999999999999999998664332
Q ss_pred CCccccccccCccCccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCc---hhhhHHHHh
Q 003780 659 SNRTIVAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSS---DQKIMLIDV 724 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~---~~~~~~~~~ 724 (796)
. .....++..|+|||++. ...++.++||||||++++||++|+.||....... .... .........
T Consensus 154 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 P-YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred C-cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 2 22345788999999875 4557889999999999999999999986332100 0000 000000000
Q ss_pred hcCCCC----CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSRLS----PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...... .............+.+++.+|++.||++||+++|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000 00011111123458899999999999999999999875
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.5e-32 Score=297.76 Aligned_cols=260 Identities=24% Similarity=0.304 Sum_probs=195.3
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK---- 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 571 (796)
..++|++.+.||+|+||.||++. ..+|+.||||++...... ....+.+.+|++++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 46789999999999999999996 457999999998654322 223456889999999999999999999987543
Q ss_pred --eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 572 --CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 572 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999998 67898887642 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC---------CCc-h--
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS---------PSS-D-- 716 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~---------~~~-~-- 716 (796)
++...... .....+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ... .
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99865432 223457889999998875 4578899999999999999999999874321000 000 0
Q ss_pred ------hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 ------QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
........+..................+.+++.+|++.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000000000001122347799999999999999999999966
No 370
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3e-32 Score=317.95 Aligned_cols=149 Identities=30% Similarity=0.442 Sum_probs=134.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|... +++.||+|++.............+..|+.++..++||||+++++++......++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 357999999999999999999765 6899999999866544444456789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
|||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997643 378888999999999999999998 99999999999999999999999999985
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-32 Score=294.76 Aligned_cols=259 Identities=27% Similarity=0.346 Sum_probs=192.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------ 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 570 (796)
.++|++.+.||+|+||.||+|..+ +++.+|+|++......+. ....+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 468999999999999999999754 689999999865543221 123567899999999999999999987543
Q ss_pred --ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 571 --KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 571 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
...++|+||+.+ ++...+... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 346999999976 676666543 23489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-----------ccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCch
Q 003780 649 GTARLLDSDSSN-----------RTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSD 716 (796)
Q Consensus 649 g~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~ 716 (796)
|+++........ .....+++.|+|||.+.+. .++.++|||||||++|||++|+.||...... .
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-----~ 234 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-----D 234 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-----H
Confidence 999765432211 1223467889999987654 5788999999999999999999998642211 0
Q ss_pred hhhHHHHh----------------------hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 QKIMLIDV----------------------LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 ~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
........ ......+............+.+++.+|++.||++|||+.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 235 QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000 00000000000001112357899999999999999999999875
No 372
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-32 Score=290.19 Aligned_cols=261 Identities=24% Similarity=0.322 Sum_probs=198.8
Q ss_pred CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|+..+.||+|++|.||+|... +++.||+|.+...... ....+.+..|++++++++|||++++++++...+..++|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc-ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 566788999999999999765 5999999999876422 22245778899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
++ ++|.+++.+.. ..+++..+..++.|+++||+|||+. +|+||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 98 58999998653 3489999999999999999999999 999999999999999999999999999987654433
Q ss_pred CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCchhhhHHHHh--hc
Q 003780 660 NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSDQKIMLIDV--LD 726 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~~~~~~~~~--~~ 726 (796)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||....... ............. .+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 33334467789999998766 78899999999999999999999986422100 0000000000000 00
Q ss_pred CCCC----CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 SRLS----PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 ~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.... .............+.+++.+|++.||++||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000 00000001113458899999999999999999999875
No 373
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=275.44 Aligned_cols=253 Identities=25% Similarity=0.306 Sum_probs=194.3
Q ss_pred ceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh-cCCCceeeEEeEEEecceeeEEEeecc
Q 003780 504 KYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK-IAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
...||.|+||+|+|-.+ +.|+..|||++.......+ .+++..|.+...+ -++||||+++|.+..++..++.||.|+
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke--q~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE--QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH--HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 45699999999999965 5799999999998776332 4678888876544 479999999999999999999999996
Q ss_pred CCcHHHHHhhc--CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC
Q 003780 582 RGSLFCFLRND--YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 582 ~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
- |++.+.+.. .+...+++...-.|......||.||.... .|||||+||+|||++..|.+|+||||.+..+.. ..
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-Si 222 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-SI 222 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-HH
Confidence 5 665543322 13345888888899999999999999874 899999999999999999999999999987643 33
Q ss_pred CccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch-h
Q 003780 660 NRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR-M 736 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 736 (796)
..+.-+|...|||||.+.. ..|+-+|||||+|+++||+.||+.|+...+ ...+.+..++....+.-..+ .
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv~gdpp~l~~~~~ 295 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVVIGDPPILLFDKE 295 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHHcCCCCeecCccc
Confidence 4455568889999998863 348889999999999999999999987321 11122222222222211111 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+..++..|+..|-..||...++.++-
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 223445688999999999999999999988763
No 374
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=316.47 Aligned_cols=259 Identities=25% Similarity=0.311 Sum_probs=210.2
Q ss_pred HHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 493 DIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 493 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
++.-..++|.+.++||+|+||.|..++.+ .++.||.|++.+..........-|..|-.+|..-+.+=|+.++-.|+++.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 44445679999999999999999999865 68999999998865544444567899999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..|+|||||+||+|..++.+.. .+++..+..++..|.-||+.+|+. |+|||||||+|||+|..|++||+|||.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999998764 488888888999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC-ccccccccCccCccccc----c-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 652 RLLDSDSSN-RTIVAGTYGYIAPELAY----T-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 652 ~~~~~~~~~-~~~~~gt~~y~aPE~~~----~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
-.+..++.. ....+|||.|++||++. + +.|+..+|.||+||++|||+.|..||+.. .-...+..++
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad--------slveTY~KIm 294 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD--------SLVETYGKIM 294 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH--------HHHHHHHHHh
Confidence 887755443 44567999999999875 3 56889999999999999999999999842 2233444455
Q ss_pred cC--CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH
Q 003780 726 DS--RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPT---MQRVCQEF 769 (796)
Q Consensus 726 ~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~L 769 (796)
+. .+..+. .........++|.+.+. +|+.|-. +.++-.|.
T Consensus 295 ~hk~~l~FP~---~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 295 NHKESLSFPD---ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred chhhhcCCCc---ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 44 222221 11233346677777765 5778876 88887764
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-32 Score=298.36 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=197.0
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce---
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC--- 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--- 572 (796)
..++|++.+.||+|++|.||+|+.. +++.||+|++....... ...+.+.+|+.++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-hHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4678999999999999999999764 68899999987543222 224567889999999999999999998876554
Q ss_pred ---eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 573 ---MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 573 ---~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 56999888752 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh----
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV---- 724 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 724 (796)
++...... .....++..|+|||...+ ..++.++||||+||++|+|++|+.||...... .....+.+.
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-----~~~~~i~~~~~~~ 235 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-----DQLKRIMNLVGTP 235 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHhcCCC
Confidence 99865432 223457889999998765 36788999999999999999999998632210 000000000
Q ss_pred -------------------hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 -------------------LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 -------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+..................+.+++.+|++.||++|||+.|++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~ 299 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP 299 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence 000000001010111234588999999999999999999999873
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.5e-32 Score=297.49 Aligned_cols=263 Identities=25% Similarity=0.411 Sum_probs=216.5
Q ss_pred cHHHHHHHhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 003780 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFC 567 (796)
Q Consensus 490 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 567 (796)
.++.+...++.|++.+.||+|.+|.||+++ .++|+.+|+|+.......+ +++..|..+++.. .|||++.++|++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEE
Confidence 344444567889999999999999999996 4579999999998877654 4678889999888 599999999999
Q ss_pred Ee-----cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 568 LH-----KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 568 ~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
.. +++.++|||||.+|+.-+++++.. ...+.|..+..|++.+++|+.+||.. .++|||+|-.||+++.++.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 64 578999999999999999998876 55699999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCCccccccccCccCccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchh
Q 003780 643 AFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~ 717 (796)
+|++|||.+..+........+..|||.|||||++... .|+.++|+||+|++..||--|.+|+.++.+.
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------- 234 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------- 234 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-------
Confidence 9999999999887666666677899999999998643 3667899999999999999999998865542
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..-+.-++-+++.-..+..-..++.++|..|+..|.++||++.++++|-.
T Consensus 235 ---raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF 284 (953)
T KOG0587|consen 235 ---RALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF 284 (953)
T ss_pred ---hhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence 11111222222222223333446889999999999999999999998743
No 377
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=4.8e-32 Score=293.75 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=191.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------ 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 570 (796)
..+|.+.+.||.|+||.||+|.. .+|+.||+|.+...... ..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~---~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ---SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc---hHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 46899999999999999999965 46899999998665432 245788999999999999999999876543
Q ss_pred --------ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CC
Q 003780 571 --------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KL 641 (796)
Q Consensus 571 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~ 641 (796)
...++|+||++ ++|.+++... .+++..+..++.||++||.|||+. +|+||||||+||+++. ++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999997 5888887543 378899999999999999999999 9999999999999985 55
Q ss_pred cEEEeeeccccccCCCCC---CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC------
Q 003780 642 EAFVADFGTARLLDSDSS---NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS------ 711 (796)
Q Consensus 642 ~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~------ 711 (796)
.++++|||.++....... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.......
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 789999999976543211 1122357889999997654 557889999999999999999999996432100
Q ss_pred ----CCCchhhhHHH----Hhhc---CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 712 ----SPSSDQKIMLI----DVLD---SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 712 ----~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
........... .... ................++.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000000000 0000 000000000001122357789999999999999999999977
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.4e-33 Score=277.85 Aligned_cols=243 Identities=23% Similarity=0.330 Sum_probs=202.2
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV 576 (796)
.+|....+||+|+||.|..|..+ +.+.||||+++++........+--..|-+++... +-|.+++++.+++.-+..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46999999999999999999655 5788999999987655433334445677777665 478999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+.||+|.-++++-+. +.+..+..++..||-||-+||++ +|+.||||.+|||++.+|++||+|||+++.--.
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999988876543 77778888999999999999999 999999999999999999999999999986554
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
+.......+|||.|+|||.+...+|+..+|.|||||+||||+.|+.||+. ..+.+....+.+.....+..
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG--------eDE~elF~aI~ehnvsyPKs-- 572 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG--------EDEDELFQAIMEHNVSYPKS-- 572 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHHHccCcCccc--
Confidence 55566778999999999999999999999999999999999999999983 34455566666666554332
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCC
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRP 760 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RP 760 (796)
-..+...+.+..+...|.+|-
T Consensus 573 ---lSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 573 ---LSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---ccHHHHHHHHHHhhcCCcccc
Confidence 122356788899999999995
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=4.2e-33 Score=287.62 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=200.9
Q ss_pred ceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccC
Q 003780 504 KYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.++||.|.||+||-|. .++|+.||||++.+.+..... ..++++|+.++++++||.||.+...|+.++..++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 5789999999999995 568999999999988776554 47899999999999999999999999999999999999987
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC---CcEEEeeeccccccCCCCC
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~ 659 (796)
.=|.-++.... ..+++.....++.||+.||.|||.+ +|+|+||||+|||+... .++||||||+|+.+++. .
T Consensus 648 DMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-s 721 (888)
T KOG4236|consen 648 DMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-S 721 (888)
T ss_pred hHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh-h
Confidence 65665665543 4588888888999999999999999 99999999999999654 47999999999988754 4
Q ss_pred CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
....+.|||.|+|||++....|...-|+||.||++|--++|..||....+ ..++.....++.+.-+ ..+
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQIQNAaFMyPp~P------W~e 790 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQIQNAAFMYPPNP------WSE 790 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhHHhhccccccCCCc------hhh
Confidence 45567899999999999999999999999999999999999999973221 1111111111111111 122
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......++|...|+..-++|-|.+.-+.|.
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLSHP 820 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence 234467899999999999999998877664
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-31 Score=308.06 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=207.4
Q ss_pred hcCCccceeeecccceeEEEEEcc----C----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP----N----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++..+.+.+|+|.||.|++|... . ...||||.++...... ..+.+..|+++|+.+ +||||+.++|+|.
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~--~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSS--EKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcH--HHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 344456669999999999999632 1 4579999998777652 357899999999999 5999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcC-----c------c--cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDY-----E------A--VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~-----~------~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
..+..++|+||++.|+|.++++..+ . . ..+...+.+.++.|||.|++||++. ++|||||.++||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence 9999999999999999999998765 0 0 2388899999999999999999999 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCCc-ccccc--ccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSNR-TIVAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLS 711 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~g--t~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~ 711 (796)
+++++..+||+|||+|+......... ....| ...|||||.+....++.|+|||||||++||++| |..||...
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~---- 525 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI---- 525 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC----
Confidence 99999999999999999765443332 21222 345999999999999999999999999999998 67776531
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.....+.+.+....+.+.+....+ ++.++++.||+.+|++||++.|+.+.+...
T Consensus 526 ----~~~~~l~~~l~~G~r~~~P~~c~~---eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 ----PPTEELLEFLKEGNRMEQPEHCSD---EIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----CcHHHHHHHHhcCCCCCCCCCCCH---HHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 101122334555444443333333 467899999999999999999999999884
No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-32 Score=265.95 Aligned_cols=252 Identities=22% Similarity=0.353 Sum_probs=212.2
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 575 (796)
.++|...++||+|+|+.|..++++ +.+.||+|++++.-..+.+.++-.+.|..+..+. +||.+|.++.+++.+...+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999764 6889999999987766666566778888888877 59999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|.||++||+|.-++++.. .++++.+..+...|.-||.|||++ ||+.||||.+||++|.+|++|+.|+|+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999988887654 388999988999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.+....+..+|||.|+|||.+.+..|...+|.|++||+++||+.|+.||+...........+.....-++.+.++.+..-
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 55666778899999999999999999999999999999999999999999766444444444444445555555543321
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP 760 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP 760 (796)
......+++.-+..||.+|.
T Consensus 483 -----svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 483 -----SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -----ehhhHHHHHHhhcCCcHHhc
Confidence 12344688899999999985
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.3e-33 Score=279.98 Aligned_cols=258 Identities=27% Similarity=0.411 Sum_probs=200.9
Q ss_pred HhcCCccceeeecccceeEEEE-EccCCcEEEEEEeccccchhh----HHHHHHHHHHHHHhhcCCCceeeEEeEEE-ec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKA-QLPNGKVVALKKLHRAETEET----TFFNSFQNEAHVLSKIAHRNIVKLYGFCL-HK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 570 (796)
..++|-..+.||+|+|+.||+| .+...+.||||+-...+.+.. .+.+-..+|..+.+.+.||.||++++|+. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 4467888899999999999999 466788999998765554432 23456779999999999999999999996 45
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~D 647 (796)
+.++-|.||++|.+|+.+++.+. .+++.++..|+.||+.||.||... .|+|||.||||.|||+-. -|.+||.|
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 78899999999999999998664 489999999999999999999986 678999999999999954 47899999
Q ss_pred eccccccCCCCCCc-------cccccccCccCccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCch
Q 003780 648 FGTARLLDSDSSNR-------TIVAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSD 716 (796)
Q Consensus 648 fg~a~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~ 716 (796)
||+++.++++.... +..+||++|++||.+.-+ .++.|+||||+||++|+.+.|+.||.... .
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq-------s 689 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ-------S 689 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch-------h
Confidence 99999998765542 235699999999987633 46779999999999999999999998422 1
Q ss_pred hhhHHHH--hhcCC-CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 717 QKIMLID--VLDSR-LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 717 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
++..+.. ++... ...+.. .....+...+|.+||++--++|..+.++..+
T Consensus 690 QQdILqeNTIlkAtEVqFP~K---PvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 690 QQDILQENTILKATEVQFPPK---PVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred HHHHHhhhchhcceeccCCCC---CccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 2221111 11111 111111 1112235689999999999999988887654
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-32 Score=290.74 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=194.3
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
.++.|.....+|.|+|+.|-.+. ..+++..+||++.+... +-.+|+.++... +||||+++.+.+.++...+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 35678888889999999998885 45789999999987632 234567666665 5999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-cCCCcEEEeeeccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL-NSKLEAFVADFGTARL 653 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~Dfg~a~~ 653 (796)
+|||.+.++-+.+.+...+. ....+..|+.+|+.|+.|||++ |||||||||+|||+ +..++++|+|||.++.
T Consensus 393 ~v~e~l~g~ell~ri~~~~~----~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE----FCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeehhccccHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 99999999988777765432 2267778999999999999999 99999999999999 6889999999999987
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
...+ ....+-|..|.|||+.....|++++|+||||++||+|++|+.||..... . ..+ ......+.+
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-------~-~ei---~~~i~~~~~ 531 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-------G-IEI---HTRIQMPKF 531 (612)
T ss_pred Cchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-------h-HHH---HHhhcCCcc
Confidence 6654 2234567899999999999999999999999999999999999883221 1 111 112222222
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
..... ....+++.+||+.||.+||+|.++..+-.-
T Consensus 532 s~~vS---~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 532 SECVS---DEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ccccC---HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 22122 236689999999999999999999988655
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.9e-31 Score=272.10 Aligned_cols=220 Identities=21% Similarity=0.221 Sum_probs=174.5
Q ss_pred ccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHH
Q 003780 510 GGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCF 588 (796)
Q Consensus 510 G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 588 (796)
|.+|.||+++. .+++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 88999999975 478999999987543 223344455556799999999999999999999999999999999
Q ss_pred HhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcccccccc
Q 003780 589 LRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTY 668 (796)
Q Consensus 589 l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 668 (796)
+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+....... ....++.
T Consensus 76 l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~ 146 (237)
T cd05576 76 ISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVEN 146 (237)
T ss_pred HHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCc
Confidence 87643 388999999999999999999998 99999999999999999999999999887654321 2234567
Q ss_pred CccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHH
Q 003780 669 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVA 748 (796)
Q Consensus 669 ~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 748 (796)
.|+|||...+..++.++||||+|+++|||++|+.|+...... .........+. .....+.+++
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~-------~~~~~~~~li 209 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPE-------WVSEEARSLL 209 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcc-------cCCHHHHHHH
Confidence 899999998888899999999999999999999886532110 00000001111 1123477899
Q ss_pred HHcCCCCCCCCCCHH
Q 003780 749 LACLHSKPKFRPTMQ 763 (796)
Q Consensus 749 ~~cl~~dP~~RPs~~ 763 (796)
.+|++.||++||++.
T Consensus 210 ~~~l~~dp~~R~~~~ 224 (237)
T cd05576 210 QQLLQFNPTERLGAG 224 (237)
T ss_pred HHHccCCHHHhcCCC
Confidence 999999999999973
No 385
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=239.83 Aligned_cols=197 Identities=25% Similarity=0.391 Sum_probs=170.2
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
.|...+.||+|.||+||+|+.+ +++.||+|+++.+..++. ......+|+-+++.++|+|||++++....++..-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 4556678999999999999755 689999999987765543 34678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
||.. +|..+..... ..++.+....++.|+++||.++|++ ++.|||+||.|.+++.+|+.|++|||+++.++-+-
T Consensus 82 ~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9975 7877776543 2488889999999999999999999 99999999999999999999999999999877654
Q ss_pred CCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCC
Q 003780 659 SNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHP 703 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p 703 (796)
.-.+...-|.+|.+|.++.+.. |++..|+||-||++.|+.....|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence 4444556799999999988765 88899999999999999976655
No 386
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=271.83 Aligned_cols=257 Identities=22% Similarity=0.311 Sum_probs=198.5
Q ss_pred HHhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-C-C----ceeeEEeEEE
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-H-R----NIVKLYGFCL 568 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-p----niv~l~~~~~ 568 (796)
..+++|.+...+|+|.||.|-++. .+.+..||+|+++... .+.+...-|++++.++. + | -+|.+.+|+.
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 347899999999999999999994 4458999999997654 23456778999999994 2 2 4788889999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---------
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS--------- 639 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~--------- 639 (796)
..++.++|+|.+ |-|+++++.++.. .+++...+..|+.|+++++++||+. +++|.||||+||++..
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEecc
Confidence 999999999988 4489999987643 4588899999999999999999999 9999999999999842
Q ss_pred -----------CCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 640 -----------KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 640 -----------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
+..++|+|||.|+.-.. .....+.|..|+|||++.+-.++.++||||+||||+|+.||..-|+.-.
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e---~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHE---HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceecc---CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 24578999999986433 3355678999999999999999999999999999999999998877322
Q ss_pred cCCCCCchhhhHHHHhhc------------------CCCC------------------Cc--cchhhHHHHHHHHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLD------------------SRLS------------------PP--VDRMVMQDIVLVTTVALA 750 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~------------------~~~~------------------~~--~~~~~~~~~~~l~~li~~ 750 (796)
.. +.-.+...++. .++. +. .-.....+...+.+++.+
T Consensus 314 n~-----EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 314 NL-----EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred cH-----HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 10 00000000000 0110 00 000112344569999999
Q ss_pred cCCCCCCCCCCHHHHHHHH
Q 003780 751 CLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 751 cl~~dP~~RPs~~evl~~L 769 (796)
||..||.+|+|+.|+++|-
T Consensus 389 mL~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 389 MLEFDPARRITLREALSHP 407 (415)
T ss_pred HHccCccccccHHHHhcCH
Confidence 9999999999999999874
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-32 Score=279.33 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=207.3
Q ss_pred cCCccceeeecccceeEEEEEccCCc-EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGK-VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+++.+..||-|+||.|=.++.+..+ .+|+|.+++....+....+-+..|-.+|...+.|.||+++..|.+.+..|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566677999999999998765433 48999888776666555667889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|-|-||.++..+++.+ .++......++.++.+|++|||++ +||.|||||+|.+++.+|-+||.|||+|+.+...
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999998654 388888889999999999999999 9999999999999999999999999999998765
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.... +.+|||.|.|||.+....++.++|.||+|+++|||++|.+||...++. ..+..++..--...++.
T Consensus 574 ~KTw-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--------ktYn~ILkGid~i~~Pr-- 642 (732)
T KOG0614|consen 574 RKTW-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--------KTYNLILKGIDKIEFPR-- 642 (732)
T ss_pred Ccee-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--------HHHHHHHhhhhhhhccc--
Confidence 5544 478999999999999999999999999999999999999999854332 22222222111111111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhh
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPT-----MQRVCQEFLT 771 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~ 771 (796)
.-.....+++++.+..+|.+|-. +.+|-+|-.-
T Consensus 643 -~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 643 -RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred -ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 11223567889999999999974 7788777543
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-32 Score=259.36 Aligned_cols=264 Identities=24% Similarity=0.333 Sum_probs=193.9
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--------
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-------- 569 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 569 (796)
..|+....||+|.||.||+|+.+ +|+.||+|++......+ .+-....+|++++..++|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 45666778999999999999755 57889998776543332 223456789999999999999999998853
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
....|+|+++|+. +|.-++.+.. ..++..++.+++.++..||.|+|.. .|+|||+||.|++++.++.+||+|||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 3468999999987 7888887543 3488899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC----CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccC--------------
Q 003780 650 TARLLDSDSS----NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSL-------------- 710 (796)
Q Consensus 650 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~-------------- 710 (796)
+++.+..... ..+...-|.+|++||.+.| ..|+++.|||+-||++.||+||.+-+......
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 9976643221 1233456999999998876 46899999999999999999998876632210
Q ss_pred --CCCCchhhhHHHHhhcCC-CCCccchhhHH------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 711 --SSPSSDQKIMLIDVLDSR-LSPPVDRMVMQ------DIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 711 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.++.... ..+.+.+... ++....+...+ ......+++..++..||.+|+++++++.|-.
T Consensus 250 kevWP~~d~-lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 250 KEVWPNVDN-LPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cccCCCccc-chHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 0011000 0111111111 11000000000 0113668999999999999999999998754
No 389
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-31 Score=262.80 Aligned_cols=265 Identities=18% Similarity=0.278 Sum_probs=209.8
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEE
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLY 564 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 564 (796)
..++....++++....+-+|.||.||+|.+. +.+.|-+|.++.....- ....+..|.-++..+.|||+.++.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~i--Qv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQI--QVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHH--HHHHHHHHHHHHhcCcCCCcccee
Confidence 3466666778888888999999999999543 34567778777665432 245788888889999999999999
Q ss_pred eEEEec-ceeeEEEeeccCCcHHHHHh-----hcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec
Q 003780 565 GFCLHK-KCMFLIYKYMKRGSLFCFLR-----NDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 565 ~~~~~~-~~~~lV~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 638 (796)
+.+.++ +..++.|.++.-|+|..++. +....+.+...+...++.|++.|++|||++ +|||.||.++|++++
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 998764 56788899999999999998 444456678888899999999999999999 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCCc--cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCc
Q 003780 639 SKLEAFVADFGTARLLDSDSSNR--TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSS 715 (796)
Q Consensus 639 ~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~ 715 (796)
+.-++||+|=.+++.+-+.+++. .....+..||+||.+....|+.++|||||||++|||+| |+.|+...++
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP------ 504 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP------ 504 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH------
Confidence 99999999999999876554432 12234568999999999999999999999999999997 8899874432
Q ss_pred hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 716 DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+....+....+-.. +...+.++..++.-||..+|++||+++|+..-|.+.
T Consensus 505 ---fEm~~ylkdGyRlaQ---P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 505 ---FEMEHYLKDGYRLAQ---PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ---HHHHHHHhccceecC---CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 223333333332211 122334588899999999999999999999988664
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.1e-30 Score=283.87 Aligned_cols=268 Identities=17% Similarity=0.211 Sum_probs=182.8
Q ss_pred HhcCCccceeeecccceeEEEEEc-----------------cCCcEEEEEEeccccchhhH-----------HHHHHHHH
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-----------------PNGKVVALKKLHRAETEETT-----------FFNSFQNE 548 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~-----------~~~~~~~E 548 (796)
..++|++.++||+|+||+||+|.. .+++.||||++......... ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 357899999999999999999953 24578999998754322110 01223457
Q ss_pred HHHHhhcCCCce-----eeEEeEEEe--------cceeeEEEeeccCCcHHHHHhhcCc---------------------
Q 003780 549 AHVLSKIAHRNI-----VKLYGFCLH--------KKCMFLIYKYMKRGSLFCFLRNDYE--------------------- 594 (796)
Q Consensus 549 ~~~l~~l~hpni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~--------------------- 594 (796)
+.++.+++|.++ ++++++|.. ++..++||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876554 677887753 3568999999999999999874311
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCC-ccccccccCccCc
Q 003780 595 AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSN-RTIVAGTYGYIAP 673 (796)
Q Consensus 595 ~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~gt~~y~aP 673 (796)
...+++..+..++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||++..+...... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12346778889999999999999999 9999999999999999999999999999765432211 1122357899999
Q ss_pred cccccCC--------------------c--CcchhHHHHHHHHHHHHhCCC-CCcccccCCCCCch--hhhH-HHHhhcC
Q 003780 674 ELAYTMV--------------------V--TEKCDVYSFGVVALEVLMGRH-PGELLSSLSSPSSD--QKIM-LIDVLDS 727 (796)
Q Consensus 674 E~~~~~~--------------------~--~~~~DVwSlGv~l~elltg~~-p~~~~~~~~~~~~~--~~~~-~~~~~~~ 727 (796)
|.+.... + ..+.||||+||++|+|++|.. |+............ .... .......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875322 1 124699999999999999985 66532211110000 0000 0001111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCC---CCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKP---KFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~L~ 770 (796)
...... .........+++.+|+..+| .+|+|++|+++|-.
T Consensus 460 ~~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 460 KYDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred CCCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 111111 11122346789999999766 68999999998843
No 391
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=8.9e-30 Score=261.51 Aligned_cols=240 Identities=29% Similarity=0.412 Sum_probs=194.0
Q ss_pred cceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHHH
Q 003780 511 GYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFL 589 (796)
Q Consensus 511 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l 589 (796)
+||.||+|... +|+.+|+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999876 589999999987654432 468899999999999999999999999999999999999999999998
Q ss_pred hhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccC
Q 003780 590 RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYG 669 (796)
Q Consensus 590 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~ 669 (796)
..... +++..+..++.++++++.|||+. +++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 79 ~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred HhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 76533 78899999999999999999999 99999999999999999999999999998765432 2334558889
Q ss_pred ccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHH
Q 003780 670 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVAL 749 (796)
Q Consensus 670 y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 749 (796)
|++||...+..++.++||||+|+++++|++|..||.... ......+............ .......+.+++.
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~ 222 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD--------QLLELFKKIGKPKPPFPPP-EWKISPEAKDLIR 222 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHhccCCCCccc-cccCCHHHHHHHH
Confidence 999999988888999999999999999999999986321 1112222222222111110 0002235788999
Q ss_pred HcCCCCCCCCCCHHHHHHH
Q 003780 750 ACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 750 ~cl~~dP~~RPs~~evl~~ 768 (796)
+|+..+|++||++.+++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHccCCchhccCHHHHhhC
Confidence 9999999999999999873
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.2e-30 Score=294.63 Aligned_cols=262 Identities=20% Similarity=0.233 Sum_probs=170.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-C----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeE-----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-N----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF----- 566 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~----- 566 (796)
..++|++.+.||+|+||.||+|... + +..||+|++......+ ....| .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-----~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-----IWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-----HHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4678999999999999999999765 4 6899999886543221 11111 1111122222222111
Q ss_pred -EEecceeeEEEeeccCCcHHHHHhhcCcc-----------------cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 003780 567 -CLHKKCMFLIYKYMKRGSLFCFLRNDYEA-----------------VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHR 628 (796)
Q Consensus 567 -~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 628 (796)
+..+...++|+||+++++|.++++..... .......+..++.|+++||+|||++ +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566899999999999999998753210 0112334567999999999999999 99999
Q ss_pred cCCCCCeEecC-CCcEEEeeeccccccCCC-CCCccccccccCccCccccccC----------------------CcCcc
Q 003780 629 DISSNNILLNS-KLEAFVADFGTARLLDSD-SSNRTIVAGTYGYIAPELAYTM----------------------VVTEK 684 (796)
Q Consensus 629 dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~ 684 (796)
||||+|||++. ++.+||+|||+|+.+... ........+++.|+|||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 578999999999865432 2223445789999999965322 23446
Q ss_pred hhHHHHHHHHHHHHhCCCCCccccc-----CCCCCchhhhHHHHhhcCCCCCccch---hhHHHHHHHHHHHHHcCCCCC
Q 003780 685 CDVYSFGVVALEVLMGRHPGELLSS-----LSSPSSDQKIMLIDVLDSRLSPPVDR---MVMQDIVLVTTVALACLHSKP 756 (796)
Q Consensus 685 ~DVwSlGv~l~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP 756 (796)
+||||+||++|||+++..|++.... +..... ..............++... ..........+++.+||+.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY-DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC-cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 7999999999999998877542100 000000 0000011111111111000 000011124579999999999
Q ss_pred CCCCCHHHHHHHH
Q 003780 757 KFRPTMQRVCQEF 769 (796)
Q Consensus 757 ~~RPs~~evl~~L 769 (796)
++|||++|+++|-
T Consensus 439 ~kR~ta~e~L~Hp 451 (566)
T PLN03225 439 RQRISAKAALAHP 451 (566)
T ss_pred ccCCCHHHHhCCc
Confidence 9999999999984
No 393
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=3.6e-33 Score=293.27 Aligned_cols=293 Identities=29% Similarity=0.433 Sum_probs=181.0
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCC-CCCCCCCCCCCCCCEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLT-GSIPPELGSLRNLEVL 150 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L 150 (796)
.+++-|.|...+|...+. .++.+.+|+.|.+++|++. .+-+.+..|+.|+.+++.+|++. .-+|..+-.|..|..|
T Consensus 32 t~~~WLkLnrt~L~~vPe--EL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~l 108 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLEQVPE--ELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTIL 108 (1255)
T ss_pred hheeEEEechhhhhhChH--HHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceee
Confidence 456666666666654332 3677778888888888876 34556777888888888888775 3467777788888888
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
|||+|+++ ..|..+..-+++..|+||+|+|..+....|-+|..|-.||||+|++... |..+..+.+|++|+|++|.+.
T Consensus 109 DLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L-PPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 109 DLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML-PPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred ecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc-CHHHHHHhhhhhhhcCCChhh
Confidence 88888888 6788888888888888888888865556677888888888888888744 445777788888888888764
Q ss_pred ccCCCcccccCccceEEecccccc-ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccc
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLN-GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITI 309 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~ 309 (796)
...-..+.++++|+.|.+++.+-+ ..+|..+..+.+|..+|||.|++. ..|+.+.++++|+.|+||+|+|+ .+....
T Consensus 187 hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~ 264 (1255)
T KOG0444|consen 187 HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTE 264 (1255)
T ss_pred HHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccH
Confidence 322222333344444444443221 234555555555555555555555 45555555555555555555555 233333
Q ss_pred ccccccceecccccccccCCCcccCCCCCCcEEEeeccccc-CCCCcccc-ccccceEEeccccc
Q 003780 310 AGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS-GSIPPEIG-LMKLEYLDLSHNKL 372 (796)
Q Consensus 310 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~-~~~L~~L~l~~N~l 372 (796)
..-.+|++|+||.|+|+ .+|.++.++++|+.|++.+|+|+ .-+|+.+| +.+|+.+..++|++
T Consensus 265 ~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~L 328 (1255)
T KOG0444|consen 265 GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKL 328 (1255)
T ss_pred HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcccc
Confidence 33344555555555555 45555555555555555555554 12344443 34444444444444
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=284.86 Aligned_cols=246 Identities=25% Similarity=0.375 Sum_probs=187.9
Q ss_pred Cccceeeeccccee-EEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEe
Q 003780 501 FDIKYCIGTGGYGS-VYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 501 ~~~~~~lg~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e 578 (796)
|...+++|.|+.|+ ||+|.. +|+.||||++.... .+-..+|+..++.-+ |||||++++.-.++...|+..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 34446789999884 699988 48999999986543 345788999999884 9999999999999999999999
Q ss_pred eccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---C--CcEEEeeecccc
Q 003780 579 YMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---K--LEAFVADFGTAR 652 (796)
Q Consensus 579 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~--~~~kl~Dfg~a~ 652 (796)
.|.- +|.+++... .+.........+.+..|++.||++||+. +||||||||.||||+. + ..++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9965 999999874 1111112144577899999999999997 9999999999999976 3 468999999999
Q ss_pred ccCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 653 LLDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG-RHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 653 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
.+..+... .....||-+|+|||++....-+.++||||+||++|+.++| .+||.+.- .++. .++...
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~-------~R~~---NIl~~~ 729 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-------ERQA---NILTGN 729 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH-------Hhhh---hhhcCc
Confidence 88765433 2346699999999999988888899999999999999997 89998421 1111 111111
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..-. ........+..++|.+|+++||..||++.+|+.|-
T Consensus 730 ~~L~--~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 730 YTLV--HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred ccee--eeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 1100 00000001467899999999999999999999873
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-30 Score=235.67 Aligned_cols=201 Identities=26% Similarity=0.400 Sum_probs=165.7
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh-cCCCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK-IAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lV 576 (796)
++......||+|++|.|-+.++ .+|...|+|++........ .++..+|+.+..+ ..+|.+|.++|.+..++..++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~--q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE--QKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH--HHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 3444456799999999988864 4799999999987665432 4577788876554 5799999999999999999999
Q ss_pred EeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||.|.- ||+.+-.+. .....+++...-+|+..|.+||.|||++. .++|||+||+|||++.+|++|+||||.+..+.
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 999975 776665432 23345888899999999999999999984 89999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCcccccc----CCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYT----MVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
+ .-..+...|...|+|||.+.. ..|+-|+||||+|+.+.||.+++.||+
T Consensus 201 d-SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 201 D-SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred h-hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 3 333444568889999998753 368899999999999999999999987
No 396
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.6e-29 Score=264.89 Aligned_cols=205 Identities=24% Similarity=0.381 Sum_probs=174.0
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.-|-.++.||-|+||.|+.++ ..+...||.|.+.+...-......-++.|..||...+.+=||+++-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 346677889999999999995 4456789999998766554444556789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC--
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD-- 655 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~-- 655 (796)
||++||++.++|-+.+ .+++..+..++..++.|+++.|.. |+|||||||+|||||.+|++||.|||++.-+.
T Consensus 709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999987643 478888888889999999999999 99999999999999999999999999986431
Q ss_pred -------CCCCC--c-------------------------------cccccccCccCccccccCCcCcchhHHHHHHHHH
Q 003780 656 -------SDSSN--R-------------------------------TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVAL 695 (796)
Q Consensus 656 -------~~~~~--~-------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ 695 (796)
..+.. . ...+||+.|+|||++....|+..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 00000 0 0134999999999999999999999999999999
Q ss_pred HHHhCCCCCccccc
Q 003780 696 EVLMGRHPGELLSS 709 (796)
Q Consensus 696 elltg~~p~~~~~~ 709 (796)
||+.|+.||.....
T Consensus 863 em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTP 876 (1034)
T ss_pred HHhhCCCCccCCCC
Confidence 99999999985443
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=6e-30 Score=238.87 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=193.7
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecc--e
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKK--C 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~--~ 572 (796)
..++|++.+.+|+|.++.||.|. ..+.+.++||++++.+ .+.+.+|++++..++ ||||+++++...++. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 35789999999999999999995 5678999999998765 357899999999998 999999999998764 5
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeeccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFGTA 651 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a 651 (796)
..+++||+.+.+...+.. .++...+..++.+++.||.|+|++ ||.|||+||.|+|+|.. -..+++|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 679999999988766553 267778888999999999999999 99999999999999975 46899999999
Q ss_pred cccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhH----------
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIM---------- 720 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~---------- 720 (796)
.++.+..... ....+.-|..||.+... .|+..-|+|||||++..|+..+.||-.-..- ..+-..
T Consensus 181 EFYHp~~eYn-VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN----~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 181 EFYHPGKEYN-VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN----YDQLVKIAKVLGTDEL 255 (338)
T ss_pred hhcCCCceee-eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC----HHHHHHHHHHhChHHH
Confidence 9887643333 33456678999988765 4777889999999999999999998532210 011000
Q ss_pred --------------HHHhhcCCCCCccchhh-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 721 --------------LIDVLDSRLSPPVDRMV-----MQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 721 --------------~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
..+++....+....... .-...+..+++.+.+..|-.+|||++|.+.|
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11111111111111000 0112457899999999999999999999887
No 398
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=1.3e-31 Score=281.70 Aligned_cols=312 Identities=30% Similarity=0.398 Sum_probs=261.9
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccc-cCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFG-SIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+..|.+++|+|...-. .++.||.|+.+.++.|++.. -+|..+..+..|+.||||+|+++ ..|..+.+-+++-.|+
T Consensus 56 kLEHLs~~HN~L~~vhG--ELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLN 132 (1255)
T KOG0444|consen 56 KLEHLSMAHNQLISVHG--ELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLN 132 (1255)
T ss_pred hhhhhhhhhhhhHhhhh--hhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEE
Confidence 45667788887653222 36678999999999999863 47788889999999999999999 8899999999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc-
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM- 230 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~- 230 (796)
||+|+|..+....|-+|+.|-.||||+|++. .+|..+..|..|++|+|++|.+.-..-..+..+++|++|.+++.+-+
T Consensus 133 LS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl 211 (1255)
T KOG0444|consen 133 LSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL 211 (1255)
T ss_pred cccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh
Confidence 9999999554456679999999999999998 56778899999999999999987665566777888889999987654
Q ss_pred ccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
..+|.++..+.+|..+|||.|++. .+|+++.++.+|+.|+||+|+|+ .+....+...+|+.|+||.|+++ .+|.++.
T Consensus 212 ~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avc 288 (1255)
T KOG0444|consen 212 DNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVC 288 (1255)
T ss_pred hcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHh
Confidence 467888999999999999999998 88999999999999999999998 44455667789999999999998 7899999
Q ss_pred cccccceeccccccccc-CCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccc---ccccc
Q 003780 311 GLISLKGLDLSNNKLSG-PIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFL---YHRFP 385 (796)
Q Consensus 311 ~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~---~~~~~ 385 (796)
.+++|+.|.+.+|+|+- -+|..++++.+|+.+..++|+|. .+|..+ .+.+|+.|.|++|++. ++|..+ ..+..
T Consensus 289 KL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~v 366 (1255)
T KOG0444|consen 289 KLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKV 366 (1255)
T ss_pred hhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcce
Confidence 99999999999998863 47888999999999999999988 666665 4788999999999987 777654 44557
Q ss_pred ccccCCCC
Q 003780 386 LDLSYNDL 393 (796)
Q Consensus 386 l~l~~N~l 393 (796)
|||..|.-
T Consensus 367 LDlreNpn 374 (1255)
T KOG0444|consen 367 LDLRENPN 374 (1255)
T ss_pred eeccCCcC
Confidence 88887743
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=248.71 Aligned_cols=263 Identities=25% Similarity=0.311 Sum_probs=194.9
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----cee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----KCM 573 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 573 (796)
+.+-.+.||-|+||.||.+.. ++|+.||.|++......- ...+.+.+|.+++..++|.|++..++...-+ .+.
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L-~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNL-ASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHH-HHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 345568899999999999965 489999999987655432 2356888999999999999999998877643 356
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
|+++|.|.. +|...+-.. +.++...+.-+.+||++||.|||+. +|.||||||.|.+++.+...||||||+|+.
T Consensus 133 YV~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence 788888865 676666543 3478888888999999999999999 999999999999999999999999999987
Q ss_pred cCCC-CCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchhhh--
Q 003780 654 LDSD-SSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQKI-- 719 (796)
Q Consensus 654 ~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~~~-- 719 (796)
-+.+ ..+.+...-|..|+|||.+.|. .|+.+.||||.||++.|++..+.-|+..+++ ..+..+...
T Consensus 206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence 5543 2334555678889999999875 5889999999999999999988888743331 111111110
Q ss_pred ---HHHHhhcCCCCCc-cch---h--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 720 ---MLIDVLDSRLSPP-VDR---M--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 720 ---~~~~~~~~~~~~~-~~~---~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
....++.....++ ... . ......+...+...++..||++|.+..+.+.+.-
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 1112222222211 110 0 1112223556778899999999999999988763
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.7e-29 Score=262.01 Aligned_cols=201 Identities=25% Similarity=0.368 Sum_probs=175.1
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHH-----HHHHHHHHHhhcC---CCceeeEEeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFN-----SFQNEAHVLSKIA---HRNIVKLYGFC 567 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~-----~~~~E~~~l~~l~---hpniv~l~~~~ 567 (796)
...+|+..+.+|.|+||.|+.|.++ +...|+||.+.+.+.-...+.+ .+..|+++|..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999765 5778999999887655444433 4678999999997 99999999999
Q ss_pred EecceeeEEEeec-cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 568 LHKKCMFLIYKYM-KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 568 ~~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
++++.+|++||-. ++.+|++++..... +++.++..|++||+.|+++||+. +|||||||-+||.++.+|-+||+
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEe
Confidence 9999999999975 56699999986543 89999999999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCCCCccccccccCccCccccccCCcCc-chhHHHHHHHHHHHHhCCCCCc
Q 003780 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 647 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DVwSlGv~l~elltg~~p~~ 705 (796)
|||.|...... ......||.+|.|||++.|..|-- .-|||++|++||.++....||+
T Consensus 713 dfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999876543 334567999999999999988765 5699999999999999999986
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.9e-28 Score=247.97 Aligned_cols=133 Identities=23% Similarity=0.435 Sum_probs=112.3
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-----C---CceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-----H---RNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---pniv~l~~~~~ 568 (796)
.++|-+.+.||.|.|++||.+. ..+.+.||+|+.+... .+.+....|++++++++ | ..||+++++|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 3689999999999999999995 4568899999987654 33456789999999985 2 48999999997
Q ss_pred e----cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec
Q 003780 569 H----KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 569 ~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 638 (796)
. +.++++|+|++ |.+|..++..... +.++...+.+|++||+.||.|||.+| +|||.||||+|||+.
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 5 45899999998 5588888876543 34899999999999999999999998 999999999999993
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-29 Score=244.03 Aligned_cols=258 Identities=24% Similarity=0.296 Sum_probs=194.6
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------c
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------K 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 571 (796)
.+|.-...+|.|.- .|..+. .-.++.||+|+....... ....+...+|...+..+.|+||++++.++.-. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 45666777888887 566663 235899999998877444 33457888999999999999999999998643 3
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..|+|||+|.. +|...++.. ++-....+|..|++.|+.|||+. +|+||||||+||++..++..||.|||+|
T Consensus 95 e~y~v~e~m~~-nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILME-----LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 67999999975 888887732 77788899999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCch-----
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSSD----- 716 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~~----- 716 (796)
+.-..+ ...+....|..|.|||++.+..+.+.+||||.||++.||++|+.-|...+..+ .+...
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 865443 34556678889999999999889999999999999999999998876432210 00000
Q ss_pred --------------hhhHHHHhhcC-CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 717 --------------QKIMLIDVLDS-RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 717 --------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.+.. ......+. ...+.....+++.+||-.||++|-+++++++|-
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~-~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEG-SKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccC-CccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 00000111111 11111111 112223477899999999999999999999984
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=4.1e-27 Score=235.85 Aligned_cols=212 Identities=33% Similarity=0.579 Sum_probs=184.7
Q ss_pred eecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcH
Q 003780 507 IGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSL 585 (796)
Q Consensus 507 lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL 585 (796)
||+|++|.||++...+ ++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++|++++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999998754 8999999998765532 245789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeeccccccCCCCCCcccc
Q 003780 586 FCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARLLDSDSSNRTIV 664 (796)
Q Consensus 586 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~ 664 (796)
.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99987642 2478999999999999999999999 9999999999999999 8999999999998765443223335
Q ss_pred ccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHH
Q 003780 665 AGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVL 743 (796)
Q Consensus 665 ~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (796)
.+...|++||..... .++.++|+|++|+++++| ..
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------~~ 189 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------PE 189 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------HH
Confidence 578899999998877 788899999999999999 23
Q ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 744 VTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 744 l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+.+++.+|++.+|++||+++++++++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 67899999999999999999998753
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=8.8e-29 Score=263.49 Aligned_cols=254 Identities=27% Similarity=0.408 Sum_probs=205.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|+...++|.|+||.|||++.+ .++..|+|+++....++ ++.+.+|+-+++..+||||+.++|.+...+..++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 468999999999999999999754 79999999998877654 45788899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+.+|+|.+.-+-. ..+++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 9999999999887754 3488999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
.-.......||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|--+..+ .....-.-.+...++.
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------mr~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------MRALFLMTKSGFQPPT 236 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------HHHHHHhhccCCCCCc
Confidence 444445578999999999764 55688999999999999999888877432221 1111111122222221
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
-.....-...+-++++.|+..+|++||++..+++|
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 11122223447899999999999999999887764
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.3e-27 Score=228.96 Aligned_cols=253 Identities=20% Similarity=0.307 Sum_probs=187.5
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeE-EEecceee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGF-CLHKKCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~-~~~~~~~~ 574 (796)
.+.|++.+.+|+|.||.+-.++++ ..+.+++|.++..... .++|.+|...--.+ .|.||+.-++. |+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 467999999999999999999765 5788999999877654 46788888776666 48999987664 56677888
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec--CCCcEEEeeecccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN--SKLEAFVADFGTAR 652 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~a~ 652 (796)
.++||++.|+|.+-+... .+.+....+++.|+++|+.|+|++ .+||||||.+|||+- +..++|+||||..+
T Consensus 99 F~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 999999999998877543 377888899999999999999999 999999999999993 34589999999998
Q ss_pred ccCCCCCCccccccccCccCccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
..+..-. ....+..|.|||..... ...+.+|||.||+++|..+||+.||+. .........+..........
T Consensus 172 k~g~tV~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-a~~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 172 KVGTTVK---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-ASIMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred ccCceeh---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-hhccCchHHHHHHHhcccCc
Confidence 6543211 22345579999976532 355678999999999999999999983 22222222222222223333
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHHH
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFR---PTMQRVCQEF 769 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~L 769 (796)
..+..+.. .....+++.++-+.++|++| -+++.....+
T Consensus 248 ~~P~~F~~----fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 248 ALPKKFNP----FSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred cCchhhcc----cCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 33333333 23346778889999999999 4555444443
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=9.1e-28 Score=248.42 Aligned_cols=210 Identities=21% Similarity=0.253 Sum_probs=177.6
Q ss_pred CcccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC------Cc
Q 003780 487 GRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH------RN 559 (796)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pn 559 (796)
+.+.+.=-+....+|.+....|+|-|++|.+|.. .-|..||||++...... .+.=..|+++|++|+. -|
T Consensus 420 GYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 420 GYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred ceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhH
Confidence 3444433344567899999999999999999964 35889999999988765 3556789999999962 38
Q ss_pred eeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 560 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
+++++..|....++|||+|-+.- +|.+++++.+....+....+..+++|+.-||..|-.. +|+|.||||+|||+++
T Consensus 496 clrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 496 CLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEecc
Confidence 99999999999999999998754 8999999988888899999999999999999999987 9999999999999998
Q ss_pred CC-cEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 640 KL-EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 640 ~~-~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
.- ..||||||.|.....+. .+.+.-+..|.|||.+.|..|+...|+||.||.||||.||+.-|..
T Consensus 572 ~k~iLKLCDfGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred CcceeeeccCcccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 65 56999999998765432 2333455679999999999999999999999999999999987753
No 407
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.4e-25 Score=227.72 Aligned_cols=198 Identities=35% Similarity=0.537 Sum_probs=172.1
Q ss_pred CccceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5677899999999999997764 899999999876543 1356889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC-
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS- 658 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~- 658 (796)
+++++|.+++...... +++..+..++.++++++.+||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999999865321 78899999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccccccCccCcccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 659 SNRTIVAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
.......++..|++||.. ....++.++|||+||+++++|++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 122334578889999998 66677889999999999999999999986
No 408
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=8.5e-29 Score=248.93 Aligned_cols=293 Identities=30% Similarity=0.425 Sum_probs=158.2
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
+.++.+|..|++.+|++....|..+. ++.|++||...|-++ .+|+.+++|.+|+-|+|..|+|. .+| .|.+++.|+
T Consensus 156 ~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~ 231 (565)
T KOG0472|consen 156 MVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLK 231 (565)
T ss_pred HHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHH
Confidence 44455555555666655544444443 556666666666555 55666666666666666666666 444 566666666
Q ss_pred eeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNH 252 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 252 (796)
+|+++.|+|+-...+...++++|..|||.+|+++ ..|+.+..+++|++||+++|.|+ ..|.+++++ .|+.|.+.+|.
T Consensus 232 Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 232 ELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred HHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCc
Confidence 6666666666333333446666666666666665 34555666666666666666666 345556666 66666666665
Q ss_pred ccc----------------------------------------------------------------cCCccccCCcc--
Q 003780 253 LNG----------------------------------------------------------------SIPPEIGNMTG-- 266 (796)
Q Consensus 253 l~~----------------------------------------------------------------~~p~~~~~l~~-- 266 (796)
+.. .+|+..+....
T Consensus 309 lrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~ 388 (565)
T KOG0472|consen 309 LRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSE 388 (565)
T ss_pred hHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhc
Confidence 420 00100000001
Q ss_pred -cceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEee
Q 003780 267 -ILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLR 345 (796)
Q Consensus 267 -L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 345 (796)
.+..+++.|++. .+|..+..+..+...-+.+|+..+.+|..+..+++|..|+|++|-+. .+|..++.+..|+.|+++
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLS 466 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccc
Confidence 233344444444 33333333333333222222223356666677778888888888777 677888888888888888
Q ss_pred cccccCCCCcccc-ccccceEEecccccCCCCCccc---cccccccccCCCCcc
Q 003780 346 NNNLSGSIPPEIG-LMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEG 395 (796)
Q Consensus 346 ~N~l~~~~~~~~~-~~~L~~L~l~~N~l~~~~p~~~---~~~~~l~l~~N~l~~ 395 (796)
+|++. .+|.... +..|+.+-.++|++...-|..+ .++..|||.+|+++.
T Consensus 467 ~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~ 519 (565)
T KOG0472|consen 467 FNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQ 519 (565)
T ss_pred ccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhh
Confidence 88776 3444332 2233333334444432222212 233345555555543
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=5.9e-26 Score=231.77 Aligned_cols=263 Identities=26% Similarity=0.352 Sum_probs=195.9
Q ss_pred HHHHhcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEE
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCL 568 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 568 (796)
+....+.|..++.||+|.|++||++... ..+.||+|.+...... ..+.+|++++..+. +.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcchhhhc
Confidence 3345678899999999999999999532 4788999999877654 46889999999996 899999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEee
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVAD 647 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~D 647 (796)
.++...+|+||++.....++... ++...+..+++.+..||+++|.. |||||||||+|++.+.. +.-.|.|
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 99999999999999988888764 67888999999999999999999 99999999999999865 5678999
Q ss_pred eccccccCCCC--------------C------------------------------CccccccccCccCcccccc-CCcC
Q 003780 648 FGTARLLDSDS--------------S------------------------------NRTIVAGTYGYIAPELAYT-MVVT 682 (796)
Q Consensus 648 fg~a~~~~~~~--------------~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~ 682 (796)
||+|...+... . .....+||+||.|||++.. ..-+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99997221000 0 0011459999999998765 4467
Q ss_pred cchhHHHHHHHHHHHHhCCCCCcccccC-C---------------------CC---Cc-hh------hhHHHHhhc-CCC
Q 003780 683 EKCDVYSFGVVALEVLMGRHPGELLSSL-S---------------------SP---SS-DQ------KIMLIDVLD-SRL 729 (796)
Q Consensus 683 ~~~DVwSlGv~l~elltg~~p~~~~~~~-~---------------------~~---~~-~~------~~~~~~~~~-~~~ 729 (796)
+++||||.||+++.+++++.||-...+. . .. .. .+ ...-.+.++ ..+
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~ 336 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESI 336 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhc
Confidence 8999999999999999999997532210 0 00 00 00 000000010 000
Q ss_pred CC-c---cchhhH--HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 730 SP-P---VDRMVM--QDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 730 ~~-~---~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. . ...... -....+.+++.+|++.||.+|.|++|.++|-.
T Consensus 337 ~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 337 YKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred ccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 00 0 000011 11236889999999999999999999998853
No 410
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.3e-25 Score=268.95 Aligned_cols=197 Identities=19% Similarity=0.247 Sum_probs=140.3
Q ss_pred hcCC-CceeeEEeEE-------EecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 003780 554 KIAH-RNIVKLYGFC-------LHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625 (796)
Q Consensus 554 ~l~h-pniv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 625 (796)
.++| +||+++++++ .+.+..+.++||+ +++|.+++... ...+++..++.++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3445 5888888877 2334667788887 55999999753 23489999999999999999999999 99
Q ss_pred EEecCCCCCeEecC-------------------CCcEEEeeeccccccCCCC----------------CCccccccccCc
Q 003780 626 VHRDISSNNILLNS-------------------KLEAFVADFGTARLLDSDS----------------SNRTIVAGTYGY 670 (796)
Q Consensus 626 vH~dlkp~NIll~~-------------------~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~gt~~y 670 (796)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999965 3455666666665321100 001113578889
Q ss_pred cCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHH
Q 003780 671 IAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALA 750 (796)
Q Consensus 671 ~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 750 (796)
+|||++.+..++.++|||||||++|||++|..|+.... ...........++.. .........++.+
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 247 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----------RTMSSLRHRVLPPQI----LLNWPKEASFCLW 247 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----------HHHHHHHHhhcChhh----hhcCHHHHHHHHH
Confidence 99999999999999999999999999999988865211 011111111111111 1112234578889
Q ss_pred cCCCCCCCCCCHHHHHHHHh
Q 003780 751 CLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 751 cl~~dP~~RPs~~evl~~L~ 770 (796)
||+++|.+||+|.|++++-.
T Consensus 248 ~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred hCCCChhhCcChHHHhhchh
Confidence 99999999999999998753
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=2.6e-24 Score=209.73 Aligned_cols=168 Identities=20% Similarity=0.106 Sum_probs=126.3
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRT 662 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 662 (796)
|+|.++++... ..+++..+..++.|+++||+|||++ + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999997542 3489999999999999999999998 5 999999999999999 99998764422
Q ss_pred ccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH-
Q 003780 663 IVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI- 741 (796)
Q Consensus 663 ~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 741 (796)
..|++.|+|||++.+..++.++|||||||++|||+||+.||...... ................... .......
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 137 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL----SAILEILLNGMPADDPRDR-SNLESVSA 137 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh----cHHHHHHHHHhccCCcccc-ccHHHHHh
Confidence 25889999999999999999999999999999999999998643211 0111111111111111000 0011111
Q ss_pred -HHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 742 -VLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 742 -~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..+.+++.+|++.||++||++.|+++++....
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 25889999999999999999999999987653
No 412
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=2.6e-27 Score=238.25 Aligned_cols=263 Identities=31% Similarity=0.477 Sum_probs=156.2
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
|+.|.+++|.+... .+.+.++..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|..+..+.+|..|+.++
T Consensus 47 l~~lils~N~l~~l-~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLEVL-REDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchhhc-cHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 44455555555532 234555666666666666665 45555666666666666666666 5566666666666666666
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
|.+. ..|+.++.+..|+.|+..+|+++. .|..++.+.+|..|++.+|++....|..+. ++.|++|+...|-+. .+|
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~s-lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQISS-LPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhcccccccc-CchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCC
Confidence 6665 345555566666666666666653 344455566666666666666644333333 666666666666665 566
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccc-cccccccceecccccccccCCCcccCCCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPIT-IAGLISLKGLDLSNNKLSGPIPPEIGKCS 337 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 337 (796)
..++++.+|..|+|..|+|. ..| .|.+++.|.+|+++.|+|+ .+|.. ...+++|..|||.+|++. ..|+.+..+.
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLr 275 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLR 275 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhh
Confidence 66666666666666666666 344 5666666666666666666 33333 336666666666666666 5666666666
Q ss_pred CCcEEEeecccccCCCCccccccccceEEecccccC
Q 003780 338 ELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLN 373 (796)
Q Consensus 338 ~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~ 373 (796)
+|.+||+++|.+++ .|...+...|+.|-+.||++.
T Consensus 276 sL~rLDlSNN~is~-Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 276 SLERLDLSNNDISS-LPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred hhhhhcccCCcccc-CCcccccceeeehhhcCCchH
Confidence 66666666666663 344444336666666666654
No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-24 Score=206.97 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=191.4
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
.....|.+...|..|+|++. |..+++|++....... ...+.|..|+-.++-+.||||..+++.|..+....++..||+
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhccCCCccccccccc-Ccchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 34456888999999999996 6667778776554433 335689999999999999999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe--eeccccccCCCCC
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA--DFGTARLLDSDSS 659 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~ 659 (796)
.|+|+..+++.. ....+..++.+++.+||+|++|||+. .|-|..--|.+..|++|++.+++|+ |-.++.
T Consensus 271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf------- 341 (448)
T KOG0195|consen 271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------- 341 (448)
T ss_pred chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-------
Confidence 999999999763 45578889999999999999999996 3334455689999999999998874 433222
Q ss_pred CccccccccCccCccccccCCcC---cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVT---EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~---~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
+.......|.|++||.++..+.+ .++|+|||++++||+.|...||.+..+. .-......+-+...+++...
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm----ecgmkialeglrv~ippgis-- 415 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM----ECGMKIALEGLRVHIPPGIS-- 415 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch----hhhhhhhhccccccCCCCcc--
Confidence 11223457889999998866533 5789999999999999999999865432 11122223333444443332
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..+.+++.-|+..||.+||.++.|+-.|+..
T Consensus 416 -----~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 416 -----RHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred -----HHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 2356788889999999999999999888764
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=9e-26 Score=227.18 Aligned_cols=295 Identities=21% Similarity=0.218 Sum_probs=197.6
Q ss_pred EEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 75 IEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 75 ~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
..+++++.+|+..+...+ +....+.|..|+|+.+.|.+|+.+++|+.||||+|+|+.+-|++|.+|++|..|-+.+
T Consensus 49 ~~VdCr~~GL~eVP~~LP----~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLP----PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred ceEEccCCCcccCcccCC----CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhc
Confidence 345566666664433322 4678889999999999999999999999999999999999999999999988887766
Q ss_pred -CCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc---
Q 003780 155 -NNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM--- 230 (796)
Q Consensus 155 -N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--- 230 (796)
|+|+...-+.|.+|..|+.|.+.-|++.-+..+.|..|++|..|.|.+|.+..+-...|..+.+++.+.+..|.+.
T Consensus 125 ~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdC 204 (498)
T KOG4237|consen 125 NNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDC 204 (498)
T ss_pred CCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccc
Confidence 8999777788999999999999999999888899999999999999999998777778999999999999998842
Q ss_pred ---------ccCCCcccccCccceEEeccccccccCCccccC-Ccccce-eecccccccccCccccccccccccccccCc
Q 003780 231 ---------GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGN-MTGILK-VDMSMNNIEGTIPLELTRLSQLLYLSISSN 299 (796)
Q Consensus 231 ---------~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 299 (796)
...|-.++...-..-..+..+++..+-+..|.. +..+.. +....+.........|..+++|+.|+|++|
T Consensus 205 nL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN 284 (498)
T KOG4237|consen 205 NLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNN 284 (498)
T ss_pred ccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCC
Confidence 122333444333444444444444322222221 111111 111111222112224556666666666666
Q ss_pred cccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc-ccccceEEecccccC
Q 003780 300 MLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKLN 373 (796)
Q Consensus 300 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~l~~N~l~ 373 (796)
+++++-+.+|.++..++.|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|. +..|..|+|-.|++.
T Consensus 285 ~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 285 KITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred ccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 66666666666666666666666666554455556666666666666666655555553 455666666666554
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=2.7e-23 Score=237.94 Aligned_cols=262 Identities=26% Similarity=0.352 Sum_probs=199.0
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
..-..|+|++|+++ .+|..+. .+|+.|+|++|+|+ .+|.. +++|++|+|++|+|+. +|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 34678999999998 5676665 47999999999998 46643 5789999999999994 4543 468899999
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|.|+. +|..+ .+|+.|+|++|+++.++ . .+++|+.|+|++|+|++ +|.. ..+|+.|++++|++++
T Consensus 270 s~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~LP-~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLTH-LPALP---SGLCKLWIFGNQLTSLP-V---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchhh-hhhch---hhcCEEECcCCcccccc-c---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 9999884 44433 57888999999998653 2 34789999999999985 4432 2468888999999984
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCC
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKC 336 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 336 (796)
+|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|+. +|.. ..+|+.|+|++|+|++ +|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~ 401 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---P 401 (788)
T ss_pred cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---c
Confidence 5642 2578999999999995 4543 3578888999999984 5543 3578999999999985 5543 3
Q ss_pred CCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcccc---ccccccccCCCCcccCCCCC
Q 003780 337 SELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLY---HRFPLDLSYNDLEGEIPDYF 401 (796)
Q Consensus 337 ~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~---~~~~l~l~~N~l~~~~p~~~ 401 (796)
++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+. .+..++|++|.|+|.+|+.+
T Consensus 402 s~L~~LdLS~N~Lss-IP~l--~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPML--PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred cCCCEEEccCCcCCC-CCcc--hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 678999999999985 5643 347888999999998 7887554 45578999999998887755
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=1.4e-22 Score=250.17 Aligned_cols=318 Identities=24% Similarity=0.261 Sum_probs=236.2
Q ss_pred CCeEEEeCCCCCcc-ccccccccCCCCCCcEEeccCCc------ccccCCcCccCC-CCCcEeecccCcCCCCCCCCCCC
Q 003780 72 RSIIEINLPEKKLK-GELSQFNFSCFPGLESLSLRFNY------LFGSIPSQVGAL-SKLRYLDFSFNNLTGSIPPELGS 143 (796)
Q Consensus 72 ~~v~~l~l~~~~l~-~~~~~~~~~~l~~L~~L~L~~n~------l~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~p~~~~~ 143 (796)
.+|..+.+.-..+. -.+....|..+++|+.|.+..+. +...+|..|..+ .+|+.|++.+|.++ .+|..| .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 34555544433332 23455678999999999997653 334567777776 46999999999887 677777 5
Q ss_pred CCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccc
Q 003780 144 LRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALN 223 (796)
Q Consensus 144 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 223 (796)
..+|++|+|++|++. .+|..+..+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..++++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 689999999999988 5777888999999999998875556664 78899999999999887778888999999999999
Q ss_pred cCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCcccc-
Q 003780 224 VGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLS- 302 (796)
Q Consensus 224 l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~- 302 (796)
+++|...+.+|..+ ++++|+.|+|++|...+.+|.. .++|+.|+|++|.++ .+|..+ .+++|++|++.++...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 99976555677655 7889999999998766666643 457889999999987 456554 5677777777664321
Q ss_pred ------CccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCCC
Q 003780 303 ------GQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTI 376 (796)
Q Consensus 303 ------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~ 376 (796)
...+..+...++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|....+++|+.|++++|.....+
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccc
Confidence 11222233346788888888877777788888888888888888765556777667778888888887766677
Q ss_pred CccccccccccccCCCCcccCCCC
Q 003780 377 PPFLYHRFPLDLSYNDLEGEIPDY 400 (796)
Q Consensus 377 p~~~~~~~~l~l~~N~l~~~~p~~ 400 (796)
|....++..|+|++|.++. +|.+
T Consensus 842 p~~~~nL~~L~Ls~n~i~~-iP~s 864 (1153)
T PLN03210 842 PDISTNISDLNLSRTGIEE-VPWW 864 (1153)
T ss_pred cccccccCEeECCCCCCcc-ChHH
Confidence 7666677777888877763 4543
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=7.1e-23 Score=234.50 Aligned_cols=265 Identities=26% Similarity=0.307 Sum_probs=209.5
Q ss_pred eEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEec
Q 003780 74 IIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLK 153 (796)
Q Consensus 74 v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 153 (796)
-..|+|+.++|+ .+|.. +. ++|+.|++++|+++. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|+
T Consensus 203 ~~~LdLs~~~Lt-sLP~~-l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcc-hh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 346899999998 45542 22 589999999999995 454 2589999999999999 45653 4789999999
Q ss_pred CCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccC
Q 003780 154 GNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPI 233 (796)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 233 (796)
+|+|+ .+|..+ ++|+.|+|++|+++. +|. .+++|+.|+|++|+|+++. .. ..+|+.|++++|+|++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~Lp-~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASLP-AL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccccCC-CC---cccccccccccCcccc-c
Confidence 99998 455533 678899999999995 454 2478999999999999753 32 3568899999999985 5
Q ss_pred CCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccccc
Q 003780 234 PSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLI 313 (796)
Q Consensus 234 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 313 (796)
|.. ..+|++|+|++|+|+ .+|.. ..+|+.|++++|+|++ +|.. .++|+.|+|++|+|++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 542 257999999999999 46653 3578889999999995 5653 3579999999999995 5543 36
Q ss_pred ccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCcccccc
Q 003780 314 SLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFLYHR 383 (796)
Q Consensus 314 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~ 383 (796)
+|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+ .+.+|+.|+|++|+|++.+|..+.++
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 89999999999985 6654 357889999999999 577766 48899999999999999888766443
No 418
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=4.1e-25 Score=222.44 Aligned_cols=279 Identities=19% Similarity=0.195 Sum_probs=238.2
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeeccc-CcCCCCCCCCCCCCCCCCEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSF-NNLTGSIPPELGSLRNLEVL 150 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L 150 (796)
...++|+|..|+++ .|++..|+.+++|++||||+|+|+.+-|++|.++.+|.+|-+-+ |+|+....+.|++|.+|+.|
T Consensus 67 ~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 67 PETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 36889999999998 57777899999999999999999999999999999998887776 99998878899999999999
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccc------------cCcchhhhcCCCC
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKL------------SGMLHQELGKLKN 218 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l------------~~~~~~~~~~l~~ 218 (796)
.+.-|++.-...+.|..+++|..|.+.+|.+..+-..+|..+.+++.+.+..|.+ ....|..+++..-
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 9999999988899999999999999999999966666999999999999999983 3345566777777
Q ss_pred ccccccCCccccccCCCccccc-CccceEEeccccccccCC-ccccCCcccceeecccccccccCccccccccccccccc
Q 003780 219 LVALNVGGNKLMGPIPSTLFRL-TNLTYLYLHSNHLNGSIP-PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSI 296 (796)
Q Consensus 219 L~~L~l~~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 296 (796)
..-..+.++++..+.+..|..- .++..=..+.+...+..| ..|..+++|++|+|++|+|+++-+.+|..+..+++|.|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 7777777877775555544321 222222223333444445 57899999999999999999999999999999999999
Q ss_pred cCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccC
Q 003780 297 SSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSG 351 (796)
Q Consensus 297 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 351 (796)
..|+|...-...|.++..|+.|+|.+|+|+..-|.+|..+.+|..|+|-.|.+.-
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 9999998888899999999999999999999999999999999999999998763
No 419
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=2.1e-24 Score=238.56 Aligned_cols=268 Identities=33% Similarity=0.433 Sum_probs=221.0
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|+.|+.++|.+....+ -..-.+|+++|+|+|+++ .+|+.++.+.+|+.|+..+|+|. .+|..+...++|+.|.+
T Consensus 219 ~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 455556666665552221 122357888899998888 56688888889999999999886 77888888888999999
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCC-ccccccCCccccccCCCcccccCccceEEeccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKN-LVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNG 255 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (796)
..|.++ -+|....++++|++|+|..|+|...++..+.-+.. |+.|+.+.|++....-..=..++.|+.|++.+|.++.
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 999888 56777778889999999999998777766666655 8888888888875443233456789999999999998
Q ss_pred cCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCC
Q 003780 256 SIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGK 335 (796)
Q Consensus 256 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 335 (796)
..-..+-+..+|+.|+|++|+|.......+.+++.|++|+||+|+++ .+|..+..+..|++|...+|++. ..| .+..
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh
Confidence 87778999999999999999999766677899999999999999999 78899999999999999999998 667 8999
Q ss_pred CCCCcEEEeecccccC-CCCccccccccceEEeccccc
Q 003780 336 CSELRNITLRNNNLSG-SIPPEIGLMKLEYLDLSHNKL 372 (796)
Q Consensus 336 l~~L~~L~L~~N~l~~-~~~~~~~~~~L~~L~l~~N~l 372 (796)
++.|+.+||+.|+|+. .+|.....++|++||+++|.-
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999999999999995 455555678999999999984
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.5e-22 Score=215.05 Aligned_cols=169 Identities=16% Similarity=0.117 Sum_probs=130.4
Q ss_pred HHHhcCCccceeeecccceeEEEEEcc--CCcEEEEEEeccccc--hhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 495 IKATEDFDIKYCIGTGGYGSVYKAQLP--NGKVVALKKLHRAET--EETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 495 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
....++|.+.+.||+|+||+||+|+.+ +++.||||++..... ......+.+.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 345678999999999999999999754 578889998763321 112234579999999999999999853322 2
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEecCCCcEEEeeec
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDI-SSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~Dfg 649 (796)
+..++||||+++++|... .. .. ...++.++++||+|||+. +|+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 467999999999999632 11 01 145788999999999999 9999999 9999999999999999999
Q ss_pred cccccCCCCCCc--------cccccccCccCccccccC
Q 003780 650 TARLLDSDSSNR--------TIVAGTYGYIAPELAYTM 679 (796)
Q Consensus 650 ~a~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~ 679 (796)
+|+.+....... ....+++.|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999765432111 234578889999998644
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.7e-21 Score=206.84 Aligned_cols=274 Identities=19% Similarity=0.216 Sum_probs=199.4
Q ss_pred CCccceeeecccceeEEEEEccCC--cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC----CceeeEEeEE-Eecce
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNG--KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH----RNIVKLYGFC-LHKKC 572 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~~~~-~~~~~ 572 (796)
+|.+.+.||+|+||.||.+..... +.+|+|.-........ ..+..|..++..+.. +++..+++.. ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 799999999999999999976543 5788887766533321 157778888888862 6889999999 57788
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-----CcEEEee
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-----LEAFVAD 647 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-----~~~kl~D 647 (796)
.++||+.. |.+|.++..... ...++.....+|+.|++.+|+++|+. |++||||||.|+++... ..+.+.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 99999977 669999886654 45699999999999999999999999 99999999999999865 3588999
Q ss_pred ecccc--ccCCCC-C------C-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchh
Q 003780 648 FGTAR--LLDSDS-S------N-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 648 fg~a~--~~~~~~-~------~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~ 717 (796)
||+++ .+.... . . .....||..|+++....+...+.+.|+||++.++.|+..|..||....... .
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-----~ 245 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-----L 245 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-----h
Confidence 99998 322111 1 1 223459999999999999999999999999999999999999986433211 1
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHHHh
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLR 789 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~ 789 (796)
...+.............. .....+.++...+-..+...+|....+...++...........+..+|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~ 314 (322)
T KOG1164|consen 246 KSKFEKDPRKLLTDRFGD---LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVK 314 (322)
T ss_pred HHHHHHHhhhhccccccC---CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCccccc
Confidence 111111111111111111 112235555555666899999999999998876655443444455556543
No 422
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.4e-20 Score=202.84 Aligned_cols=258 Identities=29% Similarity=0.408 Sum_probs=200.2
Q ss_pred CccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCC-ceeeEEeEEEecceeeEEEee
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR-NIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~lV~e~ 579 (796)
|.+.+.||.|+||.||++... ..+++|.+.............+.+|+.+++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667889999999999999876 88999999877665543467899999999999988 799999999877788999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeeccccccCCCC
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTARLLDSDS 658 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~ 658 (796)
+.++++.+++........+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776543212478889999999999999999999 999999999999999988 79999999998655433
Q ss_pred C------CccccccccCccCcccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 659 S------NRTIVAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 659 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
. ......|+..|+|||...+ ..+....|+||+|++++++++|..||...... .........+....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~ 231 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-----SATSQTLKIILELP 231 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-----ccHHHHHHHHHhcC
Confidence 2 2345679999999999987 57888999999999999999999996632211 00111111111111
Q ss_pred CC----ccch-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 730 SP----PVDR-MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 730 ~~----~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+ .... ........+.+++..|+..+|..|.++.+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 1110 001112357789999999999999999988775
No 423
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.87 E-value=4.5e-24 Score=235.96 Aligned_cols=288 Identities=28% Similarity=0.300 Sum_probs=202.7
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
+.++++|+.|....|+++.. .-..++|+.|+.++|.++...+ .+. -.+|+++++++|+++ .+|.+++.+.+|+
T Consensus 195 ls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~-~p~-p~nl~~~dis~n~l~-~lp~wi~~~~nle 267 (1081)
T KOG0618|consen 195 LSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV-HPV-PLNLQYLDISHNNLS-NLPEWIGACANLE 267 (1081)
T ss_pred hhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeecc-ccc-cccceeeecchhhhh-cchHHHHhcccce
Confidence 34444455555555444421 1123456666666666652222 111 246777777777777 4457777777777
Q ss_pred eeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCc-cceEEeccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTN-LTYLYLHSN 251 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~L~L~~N 251 (796)
.++..+|+++ .+|..+..+++|+.|+...|.++.+ |....+++.|++|+|..|+|....+..+.-+.. |..|..+.|
T Consensus 268 ~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n 345 (1081)
T KOG0618|consen 268 ALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSN 345 (1081)
T ss_pred EecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhC-CCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhc
Confidence 7777777774 4566666667777777777777643 445566677777777777776333323333322 566666666
Q ss_pred cccccCCc-cccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCC
Q 003780 252 HLNGSIPP-EIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIP 330 (796)
Q Consensus 252 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 330 (796)
++. ..|. .=..++.|+.|++.+|.|++..-+.|.+..+|+.|+|++|+|.......+.+++.|+.|+||+|+|+ .+|
T Consensus 346 ~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp 423 (1081)
T KOG0618|consen 346 KLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLP 423 (1081)
T ss_pred ccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhh
Confidence 665 3331 1123567899999999999988888999999999999999999777778899999999999999999 788
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCC-CCCccc--cccccccccCCC
Q 003780 331 PEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNG-TIPPFL--YHRFPLDLSYND 392 (796)
Q Consensus 331 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~-~~p~~~--~~~~~l~l~~N~ 392 (796)
..+.+++.|+.|...+|++. ..|....++.|+.+|+|.|.|+. .+|... .++++|||++|.
T Consensus 424 ~tva~~~~L~tL~ahsN~l~-~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 424 DTVANLGRLHTLRAHSNQLL-SFPELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred HHHHhhhhhHHHhhcCCcee-echhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 99999999999999999999 66766679999999999999984 455443 578899999996
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.8e-22 Score=228.74 Aligned_cols=255 Identities=19% Similarity=0.259 Sum_probs=188.5
Q ss_pred cceeeecccceeEEEEE-ccCCcEEEEEEecc---ccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 503 IKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHR---AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~---~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
..+.+|.|++|.|+.+. ....+..+.|.+.. ....+..+...+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45789999999887774 33444455554331 122222223337788888899999999888888877776666799
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++ +|+.++.+.. .+...++..++.|+..|++|+|+. ||.|||+|++|++++.++.+||+|||.+....-+.
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 9999998652 378888999999999999999999 99999999999999999999999999998654332
Q ss_pred ----CCccccccccCccCccccccCCcCc-chhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 659 ----SNRTIVAGTYGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 659 ----~~~~~~~gt~~y~aPE~~~~~~~~~-~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
......+|+-.|+|||.+.+..|.+ ..||||.|+++..|++|+.||.......... ...............
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~----~~~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF----KTNNYSDQRNIFEGP 550 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch----hhhccccccccccCh
Confidence 2234567999999999999999886 5799999999999999999987433221100 000001111111222
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.............++.+|+++||.+|-|+++|++.
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 22233334457789999999999999999999875
No 425
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=6.9e-21 Score=235.20 Aligned_cols=289 Identities=23% Similarity=0.291 Sum_probs=191.9
Q ss_pred cCCCC-CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcc
Q 003780 93 FSCFP-GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKL 171 (796)
Q Consensus 93 ~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 171 (796)
|..++ +|+.|++.++.+. .+|..| ...+|++|+|++|.+. .+|..+..+++|+.|+|++|...+.+|. +..+++|
T Consensus 584 ~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~L 659 (1153)
T PLN03210 584 FDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNL 659 (1153)
T ss_pred hhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcc
Confidence 44553 5888888887775 456656 4678888888888877 5677777888888888887765446664 7778888
Q ss_pred ceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccc
Q 003780 172 ITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSN 251 (796)
Q Consensus 172 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N 251 (796)
+.|+|++|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|++++|...+.+|.. .++|++|+|++|
T Consensus 660 e~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n 735 (1153)
T PLN03210 660 ETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDET 735 (1153)
T ss_pred cEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCC
Confidence 888888877666778888888888888888865444555544 6788888888887655555543 356778888888
Q ss_pred cccccCCccccCCcccceeecccccc-------cccCccccccccccccccccCccccCccccccccccccceecccccc
Q 003780 252 HLNGSIPPEIGNMTGILKVDMSMNNI-------EGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNK 324 (796)
Q Consensus 252 ~l~~~~p~~~~~l~~L~~L~Ls~N~l-------~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 324 (796)
.+. .+|..+ .+++|+.|++.++.. ....+..+...++|+.|+|++|...+.+|..+.++++|+.|+|++|.
T Consensus 736 ~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 736 AIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred ccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 876 556544 466677676665322 11122222334567777777777666777777777777777777765
Q ss_pred cccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcc---ccccccccccC-CCCcc
Q 003780 325 LSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPF---LYHRFPLDLSY-NDLEG 395 (796)
Q Consensus 325 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~---~~~~~~l~l~~-N~l~~ 395 (796)
..+.+|..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.++ .+|.. +.++..|++++ |.+.+
T Consensus 814 ~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~--~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~ 884 (1153)
T PLN03210 814 NLETLPTGI-NLESLESLDLSGCSRLRTFPDI--STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR 884 (1153)
T ss_pred CcCeeCCCC-CccccCEEECCCCCcccccccc--ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc
Confidence 444566554 5677777777776555444432 246777777777776 45543 33455667766 34443
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=7.3e-22 Score=227.90 Aligned_cols=245 Identities=27% Similarity=0.406 Sum_probs=144.4
Q ss_pred CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecc
Q 003780 98 GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALS 177 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (796)
+...|+|++++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 45667777776663 344332 46777777777777 4454443 46777777777776 4455443 357777777
Q ss_pred ccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccC
Q 003780 178 RNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSI 257 (796)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 257 (796)
+|+++ .+|..+. .+|+.|+|++|+|+. +|..+. ++|+.|++++|+|++ +|..+. ++|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 77776 3454443 467777777777764 343332 467777777777763 343332 356677777777763 4
Q ss_pred CccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCC
Q 003780 258 PPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCS 337 (796)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 337 (796)
|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~ 388 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--A 388 (754)
T ss_pred Ccccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--H
Confidence 44332 466667777777664 454442 56677777777666 3444332 46667777777666 3444433 2
Q ss_pred CCcEEEeecccccCCCCccc-----cccccceEEecccccC
Q 003780 338 ELRNITLRNNNLSGSIPPEI-----GLMKLEYLDLSHNKLN 373 (796)
Q Consensus 338 ~L~~L~L~~N~l~~~~~~~~-----~~~~L~~L~l~~N~l~ 373 (796)
.|+.|++++|+|+ .+|..+ .++++..|++.+|+++
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 5666667777666 334332 1355666667776665
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.6e-21 Score=225.20 Aligned_cols=269 Identities=25% Similarity=0.354 Sum_probs=208.0
Q ss_pred eeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCC
Q 003780 67 TCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRN 146 (796)
Q Consensus 67 ~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 146 (796)
.|-. .+.+.+++++.+++...... .++|+.|+|++|+|+. +|..+. ++|++|+|++|+|+ .+|..+. ++
T Consensus 174 ~Cl~-~~~~~L~L~~~~LtsLP~~I----p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~ 242 (754)
T PRK15370 174 DCLK-NNKTELRLKILGLTTIPACI----PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DT 242 (754)
T ss_pred hhcc-cCceEEEeCCCCcCcCCccc----ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--cc
Confidence 4533 34688999998887533221 2579999999999995 455443 58999999999999 5676554 58
Q ss_pred CCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCC
Q 003780 147 LEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGG 226 (796)
Q Consensus 147 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 226 (796)
|+.|+|++|++. .+|..+. ++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|+++. ..+. ++|+.|++++
T Consensus 243 L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~LP-~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 243 IQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTLP-AHLP--SGITHLNVQS 313 (754)
T ss_pred ccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccCc-ccch--hhHHHHHhcC
Confidence 999999999999 6787765 589999999999994 676654 58999999999999753 3332 5799999999
Q ss_pred ccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccc
Q 003780 227 NKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIP 306 (796)
Q Consensus 227 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~ 306 (796)
|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|.|+. +|
T Consensus 314 N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP 383 (754)
T PRK15370 314 NSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LP 383 (754)
T ss_pred Ccccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CC
Confidence 99995 555443 689999999999995 776664 68999999999998 4676553 689999999999994 56
Q ss_pred cccccccccceecccccccccCCCcc----cCCCCCCcEEEeecccccCCCCccccccccceEEecccccCC
Q 003780 307 ITIAGLISLKGLDLSNNKLSGPIPPE----IGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNG 374 (796)
Q Consensus 307 ~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~ 374 (796)
..+. .+|+.|++++|+|+ .+|.. ++.++++..|+|.+|.++. ..+.+|+.| ++.+.+.|
T Consensus 384 ~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~-----~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 384 ENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE-----RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred HhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH-----HHHHHHHHh-hhcccccC
Confidence 5554 37999999999998 45554 4456889999999999983 234456665 45555544
No 428
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=8.1e-21 Score=179.48 Aligned_cols=278 Identities=17% Similarity=0.241 Sum_probs=210.9
Q ss_pred HhcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC-CceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-RNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~ 574 (796)
..+.|.+++.||.|+||.+|.|. ..+|+.||||.=...... .++..|.++.+.+++ ..|..+..|..+...-.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 34679999999999999999994 678999999976544432 367889999999974 67778888888889999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC---CcEEEeeeccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTA 651 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a 651 (796)
+|||.. |-+|.++..-... .++...++-.+-|+..-++|+|.+ +++||||||+|++..-+ ..+.++|||+|
T Consensus 88 lVMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999987 4588888764432 377888899999999999999999 99999999999999754 35679999999
Q ss_pred cccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 652 RLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 652 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
+.+.+... ......||..|.+=....+..-+.+.|+=|+|.++.++--|..||+.... .........+
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka-----~tk~QKyEkI 236 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA-----ATKKQKYEKI 236 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch-----hhHHHHHHHH
Confidence 87654221 12335699999988877777778899999999999999999999986543 2333344445
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHHHhh
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLRN 790 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~ 790 (796)
....+.-+.+..+...+.++.-.+.-|-..--++-|...-+-+.+......-.-.+..+.+|.+..
T Consensus 237 ~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 237 SEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred HHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHH
Confidence 555555555555556666777888888888888888876666655444333333445566666543
No 429
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-21 Score=219.96 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=185.6
Q ss_pred CCccceeeecccceeEEEEEccCCcEEEEEEeccccch-hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETE-ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|...+.+|.+.|=.|.+|+.++|. |+||++.+.... .-..+++-..|++ ...++|||.+++.-+...+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6777889999999999999998887 889998766532 2222334444444 556689999999888888888899999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc--cCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL--LDS 656 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~--~~~ 656 (796)
|... +|+|++.-+ .-+...+.+.|+.|++.||..+|.. ||+|||||.+|||++.-..+.|+||..-+- +..
T Consensus 102 yvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9877 899988754 3477788889999999999999999 999999999999999998999999976642 222
Q ss_pred CCCC-cc----ccccccCccCccccccC----------C-cCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCc--hh
Q 003780 657 DSSN-RT----IVAGTYGYIAPELAYTM----------V-VTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSS--DQ 717 (796)
Q Consensus 657 ~~~~-~~----~~~gt~~y~aPE~~~~~----------~-~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~--~~ 717 (796)
++.. .. +......|+|||.+... . .+++.||||+||+++|+++ |++||+...-+.+... ..
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 2211 11 12244579999977542 1 5678999999999999987 5777874322211111 00
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.....+.+ +...+++++..|++.||++|-++++.++.-....+
T Consensus 255 ~e~~Le~I--------------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~F 297 (1431)
T KOG1240|consen 255 PEQLLEKI--------------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVF 297 (1431)
T ss_pred HHHHHHhC--------------cCccHHHHHHHHHccCchhccCHHHHHHhhhcccc
Confidence 01111110 11137789999999999999999999999777666
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=2.4e-20 Score=184.04 Aligned_cols=188 Identities=12% Similarity=0.153 Sum_probs=143.7
Q ss_pred eccCCcccHHHHHH--HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHH------HHHHHHHHhh
Q 003780 483 WNYDGRIAFEDIIK--ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS------FQNEAHVLSK 554 (796)
Q Consensus 483 ~~~~~~~~~~~~~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~ 554 (796)
+-.+....|.++.. ..++|...+++|.|+||.||.+.. +++.+|+|.++............ +.+|+..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~r 91 (232)
T PRK10359 13 FYKDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDR 91 (232)
T ss_pred EecCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHH
Confidence 33444445555543 468999999999999999999866 57789999998766554443333 6899999999
Q ss_pred cCCCceeeEEeEEEec--------ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 003780 555 IAHRNIVKLYGFCLHK--------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIV 626 (796)
Q Consensus 555 l~hpniv~l~~~~~~~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 626 (796)
++||+|..+.+++... +..++||||++|.+|.++.. .+. ....+++.++..+|+. |++
T Consensus 92 L~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~ 157 (232)
T PRK10359 92 VRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMV 157 (232)
T ss_pred HHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCc
Confidence 9999999999886643 35789999999999987632 222 2456899999999999 999
Q ss_pred EecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHH
Q 003780 627 HRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 698 (796)
Q Consensus 627 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ell 698 (796)
|||++|+||+++.++ ++++|||.......+... ..+.....+..++|+||||+.+....
T Consensus 158 H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 158 SGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred cCCCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999999999988 999999988754322111 11334445667999999999987654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=5.4e-20 Score=180.07 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=109.5
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhH-----------------------HHHHHHHHHHHHhhcCCCce
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETT-----------------------FFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~hpni 560 (796)
...||+|++|.||+|..++|+.||||+++........ .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998889999999999765321110 01123459999999987776
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecCCCCCeEecC
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYL-HHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~dlkp~NIll~~ 639 (796)
.....+.. ...++||||++++++....... ..++......++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 44333222 2348999999998776543222 2478889999999999999999 687 999999999999998
Q ss_pred CCcEEEeeeccccccC
Q 003780 640 KLEAFVADFGTARLLD 655 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~ 655 (796)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997543
No 432
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=4.6e-19 Score=175.29 Aligned_cols=254 Identities=18% Similarity=0.215 Sum_probs=189.0
Q ss_pred cCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV 576 (796)
-.|.+.+.||+|+||.++.|. .-+++.||||.=..... .-++..|.+..+.+. .+.|..++-|..++..-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC-----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 478999999999999999995 55799999996433322 237888999888885 79999999888888899999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-----cEEEeeeccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-----EAFVADFGTA 651 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-----~~kl~Dfg~a 651 (796)
+|.+ |-+|.++..-... .++.+.+..++.|+..-++|+|++ ..|.|||||+|+||...+ .+.++|||+|
T Consensus 103 idLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9987 4477777654332 389999999999999999999999 999999999999997543 4679999999
Q ss_pred cccCCCCCC-------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 652 RLLDSDSSN-------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 652 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
+.+.++... .....||..||+=....+.+-+.+.|.=|+|=++++.+-|..||+.... ...+..+..+
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA-----~tnK~kYeKI 251 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA-----DTNKEKYEKI 251 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC-----cchHHHHHHh
Confidence 987654322 1234599999999999999999999999999999999999999985432 2333344444
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
-+....-+........+.++..-+.-.-..+-.+-|..+-+..-
T Consensus 252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~L 295 (449)
T KOG1165|consen 252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKL 295 (449)
T ss_pred ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 34333333333333344444444444444455555665544333
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=1.3e-19 Score=184.30 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=152.7
Q ss_pred CCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC----------CceeeEEeEEE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH----------RNIVKLYGFCL 568 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------pniv~l~~~~~ 568 (796)
.+...+.||.|+++.||.++.. +|+.+|+|++..........++++++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3445678999999999999754 699999999987775555557788877766555322 22333333322
Q ss_pred e---------c---c-----eeeEEEeeccCCcHHHHHhh---cCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEE
Q 003780 569 H---------K---K-----CMFLIYKYMKRGSLFCFLRN---DYE-AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVH 627 (796)
Q Consensus 569 ~---------~---~-----~~~lV~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 627 (796)
- . . ..+++|+-+ .++|.+.+.- ... ...+....+..+..|+.+.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 1 1 1 235667766 4578776542 211 23355666778889999999999999 9999
Q ss_pred ecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCcccccc--------CCcCcchhHHHHHHHHHHHHh
Q 003780 628 RDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT--------MVVTEKCDVYSFGVVALEVLM 699 (796)
Q Consensus 628 ~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DVwSlGv~l~ellt 699 (796)
+||+|+|++++.+|.++|+||+.....+.... ....+..|.+||.... ..++.+.|.|++|+++|.|++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR---CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEE---GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceee---ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999998765432111 1234577999997644 247889999999999999999
Q ss_pred CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCC
Q 003780 700 GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFR 759 (796)
Q Consensus 700 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 759 (796)
|+.||+.......... .+.... +.+..+..+|..+|+++|++|
T Consensus 246 ~~lPf~~~~~~~~~~~----------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW----------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG----------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc----------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999985432111110 122222 344558899999999999988
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=3e-19 Score=172.07 Aligned_cols=187 Identities=12% Similarity=0.059 Sum_probs=141.2
Q ss_pred CccceeeecccceeEEEEEccCCcEEEEEEeccccchhhH-HHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEe
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETT-FFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e 578 (796)
+.+...|++|+||+||.+.. .+..++.+.+......... ....+.+|+++++++. |+++.+++++ +..+++||
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34567899999999998866 5788887777665543221 1225789999999995 5889999886 34689999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEecCCCcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDI-SSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|++|.+|...... ....++.|++++|+++|+. ||+|||| ||+||+++.++.++|+|||+|......
T Consensus 79 yI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 79 YLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred eecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9999998654321 1134778999999999999 9999999 799999999999999999999865443
Q ss_pred CCC-------------ccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 658 SSN-------------RTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 658 ~~~-------------~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
... ......++.|++|+...- ..--.+.+.++.|+-+|.++||+.|+-
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 321 011235778888885432 222256799999999999999999854
No 435
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=6.3e-22 Score=212.64 Aligned_cols=208 Identities=24% Similarity=0.275 Sum_probs=95.4
Q ss_pred hhccCccceeeccccccCCCCCccccCCCC---ccEEEcccccccC----cchhhhcCC-CCccccccCCcccccc----
Q 003780 165 LCQLTKLITMALSRNGLHGPIPSAIGDLNN---LLILSLDSNKLSG----MLHQELGKL-KNLVALNVGGNKLMGP---- 232 (796)
Q Consensus 165 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~l~~N~l~~~---- 232 (796)
+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++.
T Consensus 77 l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 156 (319)
T cd00116 77 LTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEA 156 (319)
T ss_pred HHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHH
Confidence 333444444444444444333333333333 4444444444442 112223333 4445555555544421
Q ss_pred CCCcccccCccceEEecccccccc----CCccccCCcccceeeccccccccc----CccccccccccccccccCccccCc
Q 003780 233 IPSTLFRLTNLTYLYLHSNHLNGS----IPPEIGNMTGILKVDMSMNNIEGT----IPLELTRLSQLLYLSISSNMLSGQ 304 (796)
Q Consensus 233 ~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~ 304 (796)
++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.
T Consensus 157 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 157 LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchH
Confidence 122333344555555555555421 122233344555555555555422 222344455566666666665542
Q ss_pred cccccc-----cccccceeccccccccc----CCCcccCCCCCCcEEEeecccccCCC----Ccccc-c-cccceEEecc
Q 003780 305 IPITIA-----GLISLKGLDLSNNKLSG----PIPPEIGKCSELRNITLRNNNLSGSI----PPEIG-L-MKLEYLDLSH 369 (796)
Q Consensus 305 ~~~~~~-----~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~-~-~~L~~L~l~~ 369 (796)
....+. ..++|+.|++++|.++. .+...+..+++|++|++++|.++... ...+. . ..|+.|++.+
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 222221 12566666666666641 22233445566677777777666431 11121 2 3566666666
Q ss_pred ccc
Q 003780 370 NKL 372 (796)
Q Consensus 370 N~l 372 (796)
|++
T Consensus 317 ~~~ 319 (319)
T cd00116 317 DSF 319 (319)
T ss_pred CCC
Confidence 653
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.3e-19 Score=173.35 Aligned_cols=143 Identities=22% Similarity=0.292 Sum_probs=112.1
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhh-----------------------HHHHHHHHHHHHHhhcCCCce
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEET-----------------------TFFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~hpni 560 (796)
...||+|++|.||+|...+|+.||||+++....... .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999877899999999986532100 001234678999999999987
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHHH-HhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEec
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFCF-LRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~ 638 (796)
.....+.... .++||||++++++... +.. ..++.....+++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 5544443332 4899999998865433 332 236778889999999999999999 8 999999999999999
Q ss_pred CCCcEEEeeeccccccCC
Q 003780 639 SKLEAFVADFGTARLLDS 656 (796)
Q Consensus 639 ~~~~~kl~Dfg~a~~~~~ 656 (796)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 78999999999987653
No 437
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=8.6e-22 Score=211.57 Aligned_cols=274 Identities=25% Similarity=0.288 Sum_probs=203.4
Q ss_pred EEeCCCCCccccccccccCCCCCCcEEeccCCcccc----cCCcCccCCCCCcEeecccCcCCC------CCCCCCCCCC
Q 003780 76 EINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFG----SIPSQVGALSKLRYLDFSFNNLTG------SIPPELGSLR 145 (796)
Q Consensus 76 ~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~------~~p~~~~~l~ 145 (796)
.|+|..+.+.+.--...|..+++|+.|+++++.++. .++..+...+.|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 356666666643333446677889999999998854 255566777889999999988762 2334567788
Q ss_pred CCCEEEecCCCCCCCCchhhhccCc---cceeeccccccCC----CCCccccCC-CCccEEEcccccccCc----chhhh
Q 003780 146 NLEVLNLKGNNLNGAIPSSLCQLTK---LITMALSRNGLHG----PIPSAIGDL-NNLLILSLDSNKLSGM----LHQEL 213 (796)
Q Consensus 146 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~~~~~ 213 (796)
+|++|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998777777777666 9999999999873 233456667 8999999999999843 34567
Q ss_pred cCCCCccccccCCcccccc----CCCcccccCccceEEecccccccc----CCccccCCcccceeecccccccccCcccc
Q 003780 214 GKLKNLVALNVGGNKLMGP----IPSTLFRLTNLTYLYLHSNHLNGS----IPPEIGNMTGILKVDMSMNNIEGTIPLEL 285 (796)
Q Consensus 214 ~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 285 (796)
..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 7788999999999999842 233455667999999999998743 33456678889999999999986444433
Q ss_pred cc-----ccccccccccCccccC----ccccccccccccceecccccccccC----CCcccCCC-CCCcEEEeecccc
Q 003780 286 TR-----LSQLLYLSISSNMLSG----QIPITIAGLISLKGLDLSNNKLSGP----IPPEIGKC-SELRNITLRNNNL 349 (796)
Q Consensus 286 ~~-----l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~L~~N~l 349 (796)
.. .++|++|++++|.++. .+...+..+++|+++++++|.++.. ....+... +.|+.|++.+|.+
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 32 3799999999999873 3345566678999999999999854 33334444 7899999988764
No 438
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=3.7e-19 Score=192.13 Aligned_cols=214 Identities=26% Similarity=0.489 Sum_probs=164.3
Q ss_pred HhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCe-EEecC
Q 003780 552 LSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI-VHRDI 630 (796)
Q Consensus 552 l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i-vH~dl 630 (796)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ...+++.....++++|+.||+|+|+. +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 45688999999999999999999999999999999999873 34589999999999999999999987 55 89999
Q ss_pred CCCCeEecCCCcEEEeeeccccccCCC--CCCccccccccCccCccccccCC-------cCcchhHHHHHHHHHHHHhCC
Q 003780 631 SSNNILLNSKLEAFVADFGTARLLDSD--SSNRTIVAGTYGYIAPELAYTMV-------VTEKCDVYSFGVVALEVLMGR 701 (796)
Q Consensus 631 kp~NIll~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DVwSlGv~l~elltg~ 701 (796)
+++|++++....+|++|||+....... ........-..-|.|||.+.+.. .+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998876421 11111122445799999987641 456799999999999999999
Q ss_pred CCCcccccCCCCCchhhhHHHHhhc---CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 702 HPGELLSSLSSPSSDQKIMLIDVLD---SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 702 ~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
.||+........ .+.+..+.+ ....+...... +....+..++..||..+|++||++++|-..++.....
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 999854432221 122222211 12233322211 2233588899999999999999999999998877654
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=5.4e-21 Score=171.41 Aligned_cols=163 Identities=33% Similarity=0.594 Sum_probs=111.2
Q ss_pred ccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCcc
Q 003780 117 VGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLL 196 (796)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 196 (796)
+.++++.+.|.||+|+++ .+|+.+..|.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345667778888888888 67778888888888888888888 67788888888888888888776 5677777777777
Q ss_pred EEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccc
Q 003780 197 ILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 197 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 276 (796)
.|||.+|++..- .+|+.|+.++.|+-|+|+.|.|. .+|..++++++|+.|.+..|.
T Consensus 106 vldltynnl~e~-----------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 106 VLDLTYNNLNEN-----------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hhhccccccccc-----------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 777777766521 34445555555555555555555 555555666666666666665
Q ss_pred ccccCccccccccccccccccCccccCccccc
Q 003780 277 IEGTIPLELTRLSQLLYLSISSNMLSGQIPIT 308 (796)
Q Consensus 277 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 308 (796)
+- ..|..++.+++|++|++.+|+++ .+|..
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppe 191 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPE 191 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChh
Confidence 55 45666666666666666666666 34433
No 440
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4.5e-19 Score=179.05 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=168.1
Q ss_pred cCCccceeeecccceeEEEEEccC-Cc-----------------------------------EEEEEEeccccch--hhH
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-GK-----------------------------------VVALKKLHRAETE--ETT 540 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~-----------------------------------~vavK~~~~~~~~--~~~ 540 (796)
++|++.+.||+|..+.||.++.++ |. +.|+|.+.....+ +..
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~~ 236 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDAH 236 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchHH
Confidence 568999999999999999986542 10 1456655433222 222
Q ss_pred HHHHHHHHHH------H--------Hhh--------cCCCceeeEEeEEEe---------------------------cc
Q 003780 541 FFNSFQNEAH------V--------LSK--------IAHRNIVKLYGFCLH---------------------------KK 571 (796)
Q Consensus 541 ~~~~~~~E~~------~--------l~~--------l~hpniv~l~~~~~~---------------------------~~ 571 (796)
..+.+.+|.. + .+. -+|||||+++++|.+ +.
T Consensus 237 iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~ 316 (598)
T KOG4158|consen 237 ILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPK 316 (598)
T ss_pred HHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCc
Confidence 2333333321 1 111 259999999987742 34
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec--CCC--cEEEee
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN--SKL--EAFVAD 647 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~--~~kl~D 647 (796)
..|+||.-++. +|..++.... .+.....-++.|+++|+.|||.+ ||.|||+|++||++. +|+ ...|+|
T Consensus 317 tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred eEEEehhcchh-hHHHHHhcCC----CchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcc
Confidence 67899988765 8988887543 45666777899999999999999 999999999999984 443 357899
Q ss_pred eccccccCCC------CCCccccccccCccCccccccCC------cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc
Q 003780 648 FGTARLLDSD------SSNRTIVAGTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS 715 (796)
Q Consensus 648 fg~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~ 715 (796)
||++---+.. ........|.-.-||||+....+ --.|+|.|+.|.+.||+++...||+..........
T Consensus 389 FGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r 468 (598)
T KOG4158|consen 389 FGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR 468 (598)
T ss_pred cceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh
Confidence 9987432211 11122344777899999987543 22589999999999999999999985332211111
Q ss_pred hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 716 DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .....+++ ++......+.+++...+++||.+||+..-....+
T Consensus 469 ~-------Yqe~qLPa----lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 469 T-------YQESQLPA----LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred h-------hhhhhCCC----CcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 1 11112221 1223334478899999999999999876555444
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=3.9e-20 Score=199.02 Aligned_cols=236 Identities=25% Similarity=0.299 Sum_probs=180.7
Q ss_pred eecccceeEEEEE----ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEeecc
Q 003780 507 IGTGGYGSVYKAQ----LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 507 lg~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
+|+|+||.|+.++ ...|..+|.|..++......... ....|..++...+ ||.+|++.-.++.+...+++.++..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 6899999999873 33577889988876544332211 3456778888887 9999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR 661 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 661 (796)
+|.+...+.+.. ..++.....+...+|-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 999988877543 256666666777788899999999 9999999999999999999999999999865433222
Q ss_pred cccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHH
Q 003780 662 TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDI 741 (796)
Q Consensus 662 ~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (796)
+||..|||||++. .+..++|.||||++++||+||..||.. .....++...+.. +.+..
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~-----p~~l~ 211 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEM-----PRELS 211 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCC-----chhhh
Confidence 8999999999988 457789999999999999999999872 2223333323221 22333
Q ss_pred HHHHHHHHHcCCCCCCCCCCHH-HHHHHHhhc
Q 003780 742 VLVTTVALACLHSKPKFRPTMQ-RVCQEFLTC 772 (796)
Q Consensus 742 ~~l~~li~~cl~~dP~~RPs~~-evl~~L~~~ 772 (796)
.....++..++..+|..|--.. +.+.+.++.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h 243 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGAGPDGVDEIKQH 243 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhccCcchhHHHhcc
Confidence 4467888899999999997553 344444333
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=4.2e-20 Score=165.70 Aligned_cols=164 Identities=31% Similarity=0.502 Sum_probs=131.2
Q ss_pred cCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEE
Q 003780 168 LTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLY 247 (796)
Q Consensus 168 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~ 247 (796)
+++.+.|.|++|+++ .+|..+..+.+|+.|++++|+++ ..|..++.+++|+.|+++.|++. ..|..|+++|.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344455555555555 34445555666666666666665 34556667777777777777776 7888999999999999
Q ss_pred eccccccc-cCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccc
Q 003780 248 LHSNHLNG-SIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLS 326 (796)
Q Consensus 248 L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 326 (796)
|..|++.. .+|..|..++.|+.|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|..++.+..|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 99999874 58999999999999999999999 88999999999999999999998 78999999999999999999999
Q ss_pred cCCCcccCCCC
Q 003780 327 GPIPPEIGKCS 337 (796)
Q Consensus 327 ~~~~~~~~~l~ 337 (796)
.+|+.++++.
T Consensus 187 -vlppel~~l~ 196 (264)
T KOG0617|consen 187 -VLPPELANLD 196 (264)
T ss_pred -ecChhhhhhh
Confidence 7777777543
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=6.4e-18 Score=194.90 Aligned_cols=250 Identities=22% Similarity=0.243 Sum_probs=186.1
Q ss_pred HHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC---CCceeeEEeEEEec
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA---HRNIVKLYGFCLHK 570 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~ 570 (796)
.+...+.|.+.+.||+|+||+||+|...+|+.||+|+=+....++- .--.+++.+|+ -+-|..+...+.-.
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf------YI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF------YICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee------eehHHHHHhhchhhhcchHHHHHHHccC
Confidence 3345678999999999999999999888899999999888776642 22234445554 23455666666667
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-------CCcE
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-------KLEA 643 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-------~~~~ 643 (796)
+.-++|+||.+.|+|.+++.. ...++|.....++.|+++.+++||.. +|||+||||+|.||.. ...+
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred CcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccce
Confidence 888999999999999999983 34589999999999999999999999 9999999999999943 2457
Q ss_pred EEeeeccccccCC--CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 644 FVADFGTARLLDS--DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 644 kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
+|+|||.+..+.- +...-...++|-.+-.+|+..|..+++.+|-|.++-+++.|+.|++--. .....
T Consensus 841 ~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~-----~~g~~------ 909 (974)
T KOG1166|consen 841 YLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEV-----KNGSS------ 909 (974)
T ss_pred EEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHh-----cCCcc------
Confidence 8999999987643 2333455778999999999999999999999999999999999986520 00000
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
........++...++ .-+++..+|.+|-..=|...++...+++..
T Consensus 910 -----~~~~~~~~Ry~~~~~--W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 910 -----WMVKTNFPRYWKRDM--WNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred -----eeccccchhhhhHHH--HHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 000011122222222 446777788855555578888887777653
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=4.5e-17 Score=160.68 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=104.6
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-----CCCceeeEEeEEEecc---e-
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-----AHRNIVKLYGFCLHKK---C- 572 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~---~- 572 (796)
+-.+.||+|+||.||. +++....+||++...... ..+.+.+|+.+++++ .||||++++|+++.+. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999996 443333479988764332 245789999999999 5799999999998863 3
Q ss_pred eeEEEee--ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHH-HHHhhcCCCCeEEecCCCCCeEecC----CCcEEE
Q 003780 573 MFLIYKY--MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANAL-SYLHHDCMPSIVHRDISSNNILLNS----KLEAFV 645 (796)
Q Consensus 573 ~~lV~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~ivH~dlkp~NIll~~----~~~~kl 645 (796)
+.+|+|| +++|+|.+++.+.. +++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3378999 56899999997531 4444 35577777777 999999 9999999999999974 347999
Q ss_pred eeeccc
Q 003780 646 ADFGTA 651 (796)
Q Consensus 646 ~Dfg~a 651 (796)
+||+-+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 994433
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=9.9e-17 Score=162.47 Aligned_cols=152 Identities=20% Similarity=0.204 Sum_probs=115.4
Q ss_pred HHHHHhcCCccceeeecccceeEEEEE--ccCCcEEEEEEeccccchh---------------------hHHHHHHHHHH
Q 003780 493 DIIKATEDFDIKYCIGTGGYGSVYKAQ--LPNGKVVALKKLHRAETEE---------------------TTFFNSFQNEA 549 (796)
Q Consensus 493 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~~---------------------~~~~~~~~~E~ 549 (796)
.+.+....|.+.+.||+|++|.||+|. ..+|+.||+|+++...... ......+..|+
T Consensus 22 ~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 101 (237)
T smart00090 22 SLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEF 101 (237)
T ss_pred HHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHH
Confidence 333444468889999999999999998 5689999999987543210 00112467899
Q ss_pred HHHhhcCCC--ceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC-eE
Q 003780 550 HVLSKIAHR--NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS-IV 626 (796)
Q Consensus 550 ~~l~~l~hp--niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-iv 626 (796)
+.+.++.+. .+.+++++ ...++||||++++++........ .........++.|++.++++||+. + |+
T Consensus 102 ~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~ii 171 (237)
T smart00090 102 RNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GELV 171 (237)
T ss_pred HHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCEE
Confidence 999999753 33444443 23589999999988876543221 245566788999999999999999 9 99
Q ss_pred EecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 627 HRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 627 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||||+||+++ ++.++++|||.+...+
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999999 8899999999987544
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=1.3e-17 Score=176.30 Aligned_cols=177 Identities=24% Similarity=0.375 Sum_probs=135.7
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...|+.|+++..++|.+|+.+.......++.....++.|++.|++| + +.+|||+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 3578999999999999999876666668889999999999999999 6 899999999999999999999999999
Q ss_pred ccccCCCC------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHH
Q 003780 651 ARLLDSDS------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 651 a~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
........ ...+...||..||+||.+.+..|+.|+||||+|++++|++. =..+++ ......+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d 471 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTD 471 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhh
Confidence 98776544 12334569999999999999999999999999999999997 222322 1112222
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+-+..+++.... +.+.-..++.+++.+.|.+||++.++..+
T Consensus 472 ~r~g~ip~~~~~----d~p~e~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 472 IRDGIIPPEFLQ----DYPEEYTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred hhcCCCChHHhh----cCcHHHHHHHHhcCCCcccCchHHHHhhh
Confidence 333333322211 11122367889999999999966665544
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.3e-16 Score=156.51 Aligned_cols=148 Identities=20% Similarity=0.211 Sum_probs=113.9
Q ss_pred HHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhh-------------------HHHHHHHHHHHHH
Q 003780 492 EDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEET-------------------TFFNSFQNEAHVL 552 (796)
Q Consensus 492 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l 552 (796)
.++.+....|.+.+.||+|+||.||++..++|+.||||++........ .....+..|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444545888899999999999999888899999998765431100 0112367888999
Q ss_pred hhcCCC--ceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 003780 553 SKIAHR--NIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDI 630 (796)
Q Consensus 553 ~~l~hp--niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl 630 (796)
..+.|+ .+.+.++. ...++||||+++++|.+.... .....++.++++++.++|+. +|+||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 998877 44444442 345899999999998765321 23457889999999999998 9999999
Q ss_pred CCCCeEecCCCcEEEeeeccccccC
Q 003780 631 SSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 631 kp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996544
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=4.1e-16 Score=156.64 Aligned_cols=137 Identities=15% Similarity=0.278 Sum_probs=115.1
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchh-----hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEee
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEE-----TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKY 579 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~ 579 (796)
+.||+|++|.||+|.. +|..+++|+........ ......+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 67889999876543221 11124678899999999999998888887778888999999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|++|.+++.... . .+..++.+++.+|.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986431 2 7788999999999999999 999999999999999 78899999998864
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=1.1e-16 Score=180.57 Aligned_cols=207 Identities=25% Similarity=0.310 Sum_probs=142.6
Q ss_pred hcCCccceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|+.++.|..|+||.||.++++. .+.+|. ++++.... .+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li--------lRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI--------LRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccchh--------hhc--cccccCCccee---------------
Confidence 4689999999999999999998774 556777 34333211 110 23333344444
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|+=...++..+. ++... +.+++|+|+. +|+|||+||+|.+|+.-|++|+.|||+++....
T Consensus 136 ------gDc~tllk~~g~---lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGP---LPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ------chhhhhcccCCC---Ccchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 333344443221 33322 6799999999 999999999999999999999999999875311
Q ss_pred C---------------CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 657 D---------------SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 657 ~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
. ......++||+.|+|||++....|...+|+|++|+++||.+-|..||... ..++.+
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd--------tpeelf 267 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--------TPEELF 267 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC--------CHHHHH
Confidence 0 01123368999999999999999999999999999999999999998732 222233
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCC
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRP 760 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 760 (796)
..++...+..+.. ......+..+++.+.|+.+|..|-
T Consensus 268 g~visd~i~wpE~--dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 268 GQVISDDIEWPEE--DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhhhcccccc--CcCCCHHHHHHHHHHHHhChHhhc
Confidence 3333333222111 112233477899999999999994
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=1.1e-15 Score=151.96 Aligned_cols=133 Identities=18% Similarity=0.320 Sum_probs=108.4
Q ss_pred eeecccceeEEEEEccCCcEEEEEEeccccch-----hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 506 CIGTGGYGSVYKAQLPNGKVVALKKLHRAETE-----ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
.||+|++|.||+|.. +|..+++|+....... .....+.+.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999985 5788999986543221 1112356789999999999887666655666677789999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
+|++|.+++..... .++.+++++|.++|+. +++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988764310 7899999999999999 999999999999999 78999999999875
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=9.4e-16 Score=175.36 Aligned_cols=142 Identities=17% Similarity=0.230 Sum_probs=113.6
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEecccc-c----hhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAE-T----EETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~----~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
....|...+.||+|+||+||++...+. .+++|+..... . ......+.+.+|++++++++|++++....++..+.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 344556788999999999999987544 34444322211 1 11122356889999999999999998888888877
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||+++++|.+++. ....++.+++++|.|||+. +++|||+||+||++ .++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 8899999999999998875 2467899999999999999 99999999999999 6789999999999
Q ss_pred ccc
Q 003780 652 RLL 654 (796)
Q Consensus 652 ~~~ 654 (796)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=7.4e-15 Score=144.45 Aligned_cols=140 Identities=21% Similarity=0.221 Sum_probs=100.3
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHH---------------------HHHHHHHHhhcCCC--ce
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNS---------------------FQNEAHVLSKIAHR--NI 560 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~---------------------~~~E~~~l~~l~hp--ni 560 (796)
.+.||+|+||+||+|...+|+.||||++............. ...|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999987643322111111 13566666666443 24
Q ss_pred eeEEeEEEecceeeEEEeeccCCcHHH-HHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEec
Q 003780 561 VKLYGFCLHKKCMFLIYKYMKRGSLFC-FLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 561 v~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~ 638 (796)
.+.+++ ...++||||++++.+.. .+.... .. .....++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 23589999999964321 111110 11 5567899999999999999 7 999999999999999
Q ss_pred CCCcEEEeeeccccccCC
Q 003780 639 SKLEAFVADFGTARLLDS 656 (796)
Q Consensus 639 ~~~~~kl~Dfg~a~~~~~ 656 (796)
++.++++|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 89999999999976543
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.55 E-value=3.8e-14 Score=133.94 Aligned_cols=135 Identities=18% Similarity=0.146 Sum_probs=113.9
Q ss_pred cceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC--CceeeEEeEEEecceeeEEEeec
Q 003780 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH--RNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lV~e~~ 580 (796)
+.+.||+|.++.||++...+ +.+++|....... ...+.+|+.+++.++| ..+.+++++...++..++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 45789999999999998754 7899998865543 2468889999999976 58999999988888999999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.++.
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98777533 4456677899999999999986445799999999999999989999999998864
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.53 E-value=1.6e-15 Score=160.35 Aligned_cols=194 Identities=32% Similarity=0.513 Sum_probs=141.9
Q ss_pred CCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccc
Q 003780 144 LRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALN 223 (796)
Q Consensus 144 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 223 (796)
|.--...||+.|++. .+|..++.+..|+.+.|..|.+. .+|..++++..|++|||+.|++
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nql------------------ 133 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQL------------------ 133 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchh------------------
Confidence 444556677777777 66777777767777777777666 4555555555555555555544
Q ss_pred cCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 224 VGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 224 l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
+ ..|..+..++ |+.|.+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|++..|++.
T Consensus 134 ------S-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~- 202 (722)
T KOG0532|consen 134 ------S-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE- 202 (722)
T ss_pred ------h-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-
Confidence 4 4555666665 888888888887 77888888888888888888888 66778888888888888888888
Q ss_pred ccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccccc----ccceEEecccc
Q 003780 304 QIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLM----KLEYLDLSHNK 371 (796)
Q Consensus 304 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~----~L~~L~l~~N~ 371 (796)
.+|..+..| .|..||+|.|+++ .+|..|.+|..|++|-|.+|.|. +.|..+..+ =.++|+..-++
T Consensus 203 ~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 203 DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 566666654 4889999999998 78999999999999999999998 445444322 26777777774
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=1.1e-13 Score=140.67 Aligned_cols=138 Identities=17% Similarity=0.263 Sum_probs=106.1
Q ss_pred ceeee-cccceeEEEEEccCCcEEEEEEeccccc----------hhhHHHHHHHHHHHHHhhcCCCce--eeEEeEEEec
Q 003780 504 KYCIG-TGGYGSVYKAQLPNGKVVALKKLHRAET----------EETTFFNSFQNEAHVLSKIAHRNI--VKLYGFCLHK 570 (796)
Q Consensus 504 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~~ 570 (796)
...|| .|+.|+||.+... +..+++|++..... ........+.+|++++.+++|+++ ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999875 77899998864221 001123467889999999998775 6777765443
Q ss_pred c----eeeEEEeeccC-CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEE
Q 003780 571 K----CMFLIYKYMKR-GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFV 645 (796)
Q Consensus 571 ~----~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 645 (796)
. ..++|+|++++ .+|.+++.+. .++.. .+.++++++.+||+. ||+||||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6898887643 13433 357899999999999 9999999999999999999999
Q ss_pred eeeccccc
Q 003780 646 ADFGTARL 653 (796)
Q Consensus 646 ~Dfg~a~~ 653 (796)
+|||.++.
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998875
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=3.1e-14 Score=164.48 Aligned_cols=108 Identities=38% Similarity=0.587 Sum_probs=82.0
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
++.|+|++|.+.|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|++++.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 45566777777777777777777888888888877777777777788888888888888777787788888888888888
Q ss_pred cccCCCCCccccCC-CCccEEEccccccc
Q 003780 179 NGLHGPIPSAIGDL-NNLLILSLDSNKLS 206 (796)
Q Consensus 179 N~l~~~~p~~~~~l-~~L~~L~L~~N~l~ 206 (796)
|+++|.+|..+..+ .++..+++.+|...
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccc
Confidence 88887777777653 46677888887643
No 457
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=2e-14 Score=142.56 Aligned_cols=208 Identities=23% Similarity=0.343 Sum_probs=144.3
Q ss_pred HHHhhcCCCceeeEEeEEEec-----ceeeEEEeeccCCcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 003780 550 HVLSKIAHRNIVKLYGFCLHK-----KCMFLIYKYMKRGSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCMP 623 (796)
Q Consensus 550 ~~l~~l~hpniv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 623 (796)
.-+-++.|.|||+++.|+.+. .....+.|||+.|++..+|++... ...+......+++.||..||.|||+ |.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 344556799999999998653 356789999999999999987532 3457778888999999999999999 688
Q ss_pred CeEEecCCCCCeEecCCCcEEEeeeccccccC----CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh
Q 003780 624 SIVHRDISSNNILLNSKLEAFVADFGTARLLD----SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM 699 (796)
Q Consensus 624 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt 699 (796)
+|+|+++..+-|++..++-+|++--.-..... ........-.+-++|.|||+-.....+.++|||+||+...||.-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 99999999999999999988875321111000 00011112236689999999877778889999999999999988
Q ss_pred CCCC-CcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 700 GRHP-GELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 700 g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
|..- -.... ....+......+- .+....+ ..++.+|++..|..||+|.+++.|.-...+
T Consensus 278 lEiq~tnseS-----~~~~ee~ia~~i~-~len~lq----------r~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 278 LEIQSTNSES-----KVEVEENIANVII-GLENGLQ----------RGSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred heeccCCCcc-----eeehhhhhhhhee-eccCccc----------cCcCcccccCCCCCCcchhhhhcCceeeec
Confidence 7644 21111 1111111111111 1111111 146778999999999999999988654433
No 458
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=1.6e-15 Score=172.35 Aligned_cols=253 Identities=21% Similarity=0.278 Sum_probs=187.1
Q ss_pred cCCccceeeecccceeEEEEEcc--CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP--NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 575 (796)
..|...+.||+|+|+.|-..... ....+|+|.+.... ......+....|..+-..+. |+|++.+++...+++..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 46777888999999999888553 34456667665554 22233456667888888887 9999999999999999999
Q ss_pred EEeeccCCcHHHHH-hhcCcccccCHHHHHHHHHHHHHHHHHHh-hcCCCCeEEecCCCCCeEecCCC-cEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFL-RNDYEAVVLDWTMRVNIIKCVANALSYLH-HDCMPSIVHRDISSNNILLNSKL-EAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~ 652 (796)
+.+|..++++.+.+ +... ...+....-.++.|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999888 4332 12455566778999999999999 76 999999999999999999 99999999998
Q ss_pred ccCC-CC--CCcccccc-ccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 653 LLDS-DS--SNRTIVAG-TYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 653 ~~~~-~~--~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
.+.. .. ......+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...... .........
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-------~~~~~~~~~ 246 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-------GRYSSWKSN 246 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-------ccceeeccc
Confidence 7655 22 22234567 9999999998884 44567899999999999999999987433221 111111111
Q ss_pred C---CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 728 R---LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 728 ~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
. ......... ....++..+++..+|..|.+.+++..+
T Consensus 247 ~~~~~~~~~~~~~----~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 247 KGRFTQLPWNSIS----DQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ccccccCccccCC----hhhhhcccccccCCchhcccccccccc
Confidence 1 011111111 125577888999999999999887655
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.4e-13 Score=152.36 Aligned_cols=201 Identities=36% Similarity=0.539 Sum_probs=141.0
Q ss_pred EEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCC-CCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 101 SLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLR-NLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 101 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
.|+++.|.+... ...+..++.++.|++.+|.++ .+|+....++ +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 466666666422 223555577788888888877 5566666664 7888888888877 55667777888888888888
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPP 259 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 259 (796)
+++. +|...+.+++|+.|++++|+++.+ |.....+..|++|.+++|.+. ..+..+.++.++..|.+.+|++. .++.
T Consensus 174 ~l~~-l~~~~~~~~~L~~L~ls~N~i~~l-~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLSD-LPKLLSNLSNLNNLDLSGNKISDL-PPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhhh-hhhhhhhhhhhhheeccCCccccC-chhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 8773 444444677788888888888744 334455566888888888544 35556777788888888888877 3466
Q ss_pred cccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 260 EIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 260 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
.++.+++++.|++++|+++...+ ++.+.+|++|++++|.+....|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 67778888888888888884433 77888888888888888766555443
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=3.3e-15 Score=158.04 Aligned_cols=197 Identities=31% Similarity=0.502 Sum_probs=147.2
Q ss_pred cCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccE
Q 003780 118 GALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLI 197 (796)
Q Consensus 118 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 197 (796)
-.+..-...||+.|++. .+|..+..+..|+.|.|..|.+. .+|..++++..|.+|+|+.|+++ ..|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 34555667788888887 77877887888888888888887 77888888888888888888887 5677777765 888
Q ss_pred EEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccc
Q 003780 198 LSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNI 277 (796)
Q Consensus 198 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 277 (796)
|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..+..+ .|..||+|.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 888888887 45666778888888888888887 56777888888888888888887 566666644 577788888888
Q ss_pred cccCccccccccccccccccCccccCcccccccc---ccccceecccccc
Q 003780 278 EGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG---LISLKGLDLSNNK 324 (796)
Q Consensus 278 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~---l~~L~~L~Ls~N~ 324 (796)
+ .+|-.|.+|+.|++|-|.+|.|. ..|..+.- ..=.++|+..-++
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 8 67888888888888888888887 34444322 2234566666654
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.2e-13 Score=152.69 Aligned_cols=202 Identities=33% Similarity=0.466 Sum_probs=156.3
Q ss_pred cEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccC-ccceeeccccccCCCCCccccCCCCccEEEccc
Q 003780 124 RYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLT-KLITMALSRNGLHGPIPSAIGDLNNLLILSLDS 202 (796)
Q Consensus 124 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 202 (796)
..|+++.|.+.. ....+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 368888888752 2334556688999999999988 6677777774 8999999999988 4556778889999999999
Q ss_pred ccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCc
Q 003780 203 NKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIP 282 (796)
Q Consensus 203 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 282 (796)
|+++.+ +...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+.++.++..|.+++|++.. .+
T Consensus 173 N~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 173 NDLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred chhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-cc
Confidence 998854 444447888899999999998 55655555666899999999654 466678888888888888888873 46
Q ss_pred cccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 283 LELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 283 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
..++.+++|++|++++|.++...+ ++.+.+|+.|++++|.+....|....
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred chhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 778888889999999999885444 88888999999999988866655444
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.37 E-value=2.9e-12 Score=141.65 Aligned_cols=145 Identities=21% Similarity=0.209 Sum_probs=101.2
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhH-------------------------------HHH------HHH
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETT-------------------------------FFN------SFQ 546 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-------------------------------~~~------~~~ 546 (796)
.+.||.|++|.||+|+.++|+.||||+.+........ ..+ .+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3679999999999999999999999998764211100 000 244
Q ss_pred HHHHHHhhcC----CCceeeEEeEE-EecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHH-HHHHHhhc
Q 003780 547 NEAHVLSKIA----HRNIVKLYGFC-LHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN-ALSYLHHD 620 (796)
Q Consensus 547 ~E~~~l~~l~----hpniv~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-~L~~LH~~ 620 (796)
+|++.+.+++ |.+-+.+-..+ ......++||||++|++|.+....... .. .+.+++..+++ .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5555555552 32223332222 223457899999999999887653211 12 23456666665 46788988
Q ss_pred CCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 621 CMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 621 ~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|++|+|++|.||+++.++.++++|||++..+.+
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987653
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.37 E-value=1.3e-11 Score=134.80 Aligned_cols=169 Identities=15% Similarity=0.191 Sum_probs=128.0
Q ss_pred EccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCccccc
Q 003780 519 QLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVL 598 (796)
Q Consensus 519 ~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l 598 (796)
+..++.+|.|........ .......+-++.++.+|||||+++++.++.++..|+|+|-+. .|..++++.
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------ 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------ 101 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------
Confidence 344688888887766544 224567788899999999999999999999999999999874 466666643
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCcccccc
Q 003780 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT 678 (796)
Q Consensus 599 ~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 678 (796)
........+.||+.||.+||+.| +++|++|....|+++..|..||++|.++..............--..|..|+.+..
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 34556678899999999999776 8999999999999999999999999988654332211111112224667775443
Q ss_pred CCcCcchhHHHHHHHHHHHHhCCC
Q 003780 679 MVVTEKCDVYSFGVVALEVLMGRH 702 (796)
Q Consensus 679 ~~~~~~~DVwSlGv~l~elltg~~ 702 (796)
.. -..|.|.|||+++|++.|..
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCccc
Confidence 32 34699999999999999943
No 464
>PLN03150 hypothetical protein; Provisional
Probab=99.34 E-value=8e-13 Score=152.85 Aligned_cols=93 Identities=35% Similarity=0.585 Sum_probs=83.3
Q ss_pred ccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc-ccccceEEec
Q 003780 290 QLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLS 368 (796)
Q Consensus 290 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~l~ 368 (796)
.++.|+|++|.++|.+|..+..+++|+.|+|++|++.|.+|..++.+++|+.|+|++|+++|.+|..++ +++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 478889999999999999999999999999999999999999999999999999999999999998774 7889999999
Q ss_pred ccccCCCCCccccc
Q 003780 369 HNKLNGTIPPFLYH 382 (796)
Q Consensus 369 ~N~l~~~~p~~~~~ 382 (796)
+|+++|.+|..+..
T Consensus 499 ~N~l~g~iP~~l~~ 512 (623)
T PLN03150 499 GNSLSGRVPAALGG 512 (623)
T ss_pred CCcccccCChHHhh
Confidence 99999999977643
No 465
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=2.7e-13 Score=139.77 Aligned_cols=227 Identities=24% Similarity=0.192 Sum_probs=154.2
Q ss_pred EEeccCCcccccCCcCc----cCCCCCcEeecccCcCCCCCC--CCCCCCCCCCEEEecCCCCCCCCc--hhhhccCccc
Q 003780 101 SLSLRFNYLFGSIPSQV----GALSKLRYLDFSFNNLTGSIP--PELGSLRNLEVLNLKGNNLNGAIP--SSLCQLTKLI 172 (796)
Q Consensus 101 ~L~L~~n~l~~~~~~~~----~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~ 172 (796)
.+.+++-.+.++--+.+ .++.+|+...|.+..+. ..+ .....+++++.||||+|-+....| .-...|++|+
T Consensus 97 ~~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le 175 (505)
T KOG3207|consen 97 VLSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLE 175 (505)
T ss_pred HhhhcCceeEEecHHHHHHHhhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccch
Confidence 45555555554333323 45677888888877766 222 355678888888888888775332 3446788888
Q ss_pred eeeccccccCCCCCcc-ccCCCCccEEEcccccccCc-chhhhcCCCCccccccCCccccccCCCcccccCccceEEecc
Q 003780 173 TMALSRNGLHGPIPSA-IGDLNNLLILSLDSNKLSGM-LHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHS 250 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~ 250 (796)
.|+|+.|++....... -..++.|+.|.|+.|.|+.. +...+..+|+|+.|+|..|....+.......+..|++|+|++
T Consensus 176 ~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~ 255 (505)
T KOG3207|consen 176 NLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSN 255 (505)
T ss_pred hcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccC
Confidence 8888888887332221 22467888888988888732 334566788899999998864434444555677889999999
Q ss_pred ccccccC-CccccCCcccceeeccccccccc-Cccc-----cccccccccccccCccccCc-cccccccccccceecccc
Q 003780 251 NHLNGSI-PPEIGNMTGILKVDMSMNNIEGT-IPLE-----LTRLSQLLYLSISSNMLSGQ-IPITIAGLISLKGLDLSN 322 (796)
Q Consensus 251 N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-~p~~-----l~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~Ls~ 322 (796)
|++.... -...+.++.|..|+++.+.+... .|+. ...+++|++|+++.|++... --..+..+++|+.|.+..
T Consensus 256 N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 256 NNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred CcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 8887322 13567788888888888888753 2332 35678899999999988531 223455677888888888
Q ss_pred cccccC
Q 003780 323 NKLSGP 328 (796)
Q Consensus 323 N~l~~~ 328 (796)
|.++.+
T Consensus 336 n~ln~e 341 (505)
T KOG3207|consen 336 NYLNKE 341 (505)
T ss_pred cccccc
Confidence 888743
No 466
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=1.1e-12 Score=135.15 Aligned_cols=210 Identities=21% Similarity=0.226 Sum_probs=145.0
Q ss_pred CCCCCCCEEEecCCCCCCCCc--hhhhccCccceeeccccccCCC--CCccccCCCCccEEEcccccccCcchh-hhcCC
Q 003780 142 GSLRNLEVLNLKGNNLNGAIP--SSLCQLTKLITMALSRNGLHGP--IPSAIGDLNNLLILSLDSNKLSGMLHQ-ELGKL 216 (796)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l 216 (796)
.++.+|+...|.+.... ..+ .....+++++.|||++|-+... +-.....|++|+.|+|+.|++.....+ .-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45778888888888776 333 4667788888888888888743 224456788888888888888743332 22356
Q ss_pred CCccccccCCcccccc-CCCcccccCccceEEeccccccccCCccccCCcccceeeccccccccc-Cccccccccccccc
Q 003780 217 KNLVALNVGGNKLMGP-IPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGT-IPLELTRLSQLLYL 294 (796)
Q Consensus 217 ~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L 294 (796)
+.|+.|.|+.|.|+.- +-..+..+|+|+.|+|..|...+.-......+..|+.|||++|++-.. .-...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 7788888888888732 223445678888888888863333334445577888888888887632 12456778888888
Q ss_pred cccCccccCcc-ccc-----cccccccceecccccccccC-CCcccCCCCCCcEEEeecccccCC
Q 003780 295 SISSNMLSGQI-PIT-----IAGLISLKGLDLSNNKLSGP-IPPEIGKCSELRNITLRNNNLSGS 352 (796)
Q Consensus 295 ~l~~N~l~~~~-~~~-----~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 352 (796)
+++.+.+...- |.. ...+++|++|+++.|++..- --..+..+++|+.|.+..|.++..
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 88888887532 322 35678888888888888531 123455677888888888888754
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=5.4e-12 Score=136.86 Aligned_cols=249 Identities=24% Similarity=0.248 Sum_probs=178.5
Q ss_pred CCccceeeec--ccceeEEEEEc---cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEeccee
Q 003780 500 DFDIKYCIGT--GGYGSVYKAQL---PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 500 ~~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 573 (796)
.|.+...+|. |.+|.||.+.. .++..+|+|+-+........ ...=.+|+....+++ |+|.++.+..+...+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-SKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-cccccchhhcccccCccccccccCcccccCCcc
Confidence 5667788999 99999999965 46889999985443332111 112345677777775 99999988889999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHH----HHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeee
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVAN----ALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADF 648 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Df 648 (796)
++-+|++. .++.++.+.... .++....+.+..+..+ |+.++|+. .++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999886 577777765432 2566667777778878 99999999 99999999999999999 78899999
Q ss_pred ccccccCCCCCCcccc-----ccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 649 GTARLLDSDSSNRTIV-----AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|+...+.......... .|...|++||...+ .++.++|+|++|.+..+-.+|..+........+....+.
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~----- 341 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG----- 341 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc-----
Confidence 9998887654332222 57788999998655 568899999999999999998766442100000000000
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+..++-+ .....+...+..|++.+|..|++.+++..+
T Consensus 342 ----~ip~e~~~---~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 342 ----YIPLEFCE---GGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ----cCchhhhc---CcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 01111111 111224458889999999999999887655
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.27 E-value=1e-12 Score=145.62 Aligned_cols=246 Identities=28% Similarity=0.336 Sum_probs=119.0
Q ss_pred CCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceee
Q 003780 96 FPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMA 175 (796)
Q Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 175 (796)
+..++.++++.|.+.. +-..+..+.+|+.|+|.+|.|.. +...+..+++|++|+|++|+|+.. ..+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhhe
Confidence 3445555566665553 22335555666666666666652 222255566666666666666644 2344445566666
Q ss_pred ccccccCCCCCccccCCCCccEEEcccccccCcch-hhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 176 LSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 176 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+++|.|+.. ..+..+++|+.+++++|++..+.+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 666666532 233335556666666665554433 2 34455555555555555421 22333334444455555554
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
..-+ +..+.. ..|+.+++++|++. ..+..+..+..+..|++.+|++... ..+.
T Consensus 222 ~~~~--l~~~~~----------------------~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~ 274 (414)
T KOG0531|consen 222 KLEG--LNELVM----------------------LHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLE 274 (414)
T ss_pred eccC--cccchh----------------------HHHHHHhcccCccc-cccccccccccccccchhhcccccc--cccc
Confidence 2211 111111 02445555555444 2223344445555555555555432 2233
Q ss_pred CCCCCcEEEeecccccCC---CCc--cccccccceEEecccccCCCCC
Q 003780 335 KCSELRNITLRNNNLSGS---IPP--EIGLMKLEYLDLSHNKLNGTIP 377 (796)
Q Consensus 335 ~l~~L~~L~L~~N~l~~~---~~~--~~~~~~L~~L~l~~N~l~~~~p 377 (796)
..+.+..+.+..|.+... ... ....++++.+.+.+|.+....+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 275 RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 344555555555555421 111 1124566666777776665444
No 469
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=6e-12 Score=140.39 Aligned_cols=149 Identities=19% Similarity=0.195 Sum_probs=96.1
Q ss_pred HhcCCccceeeecccceeEEEEEccC-CcEEEEEEeccccchh-------------------------------hHHHHH
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEE-------------------------------TTFFNS 544 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~-------------------------------~~~~~~ 544 (796)
....|+. +.||+|++|.||+|+.++ |+.||||+.++..... .+..+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999999887 9999999998652110 011122
Q ss_pred ------HHHHHHHHhhcC----CCceeeEEeEEEe-cceeeEEEeeccCCcHHHHH--hhcC-cccccCHHHHHHHHHHH
Q 003780 545 ------FQNEAHVLSKIA----HRNIVKLYGFCLH-KKCMFLIYKYMKRGSLFCFL--RNDY-EAVVLDWTMRVNIIKCV 610 (796)
Q Consensus 545 ------~~~E~~~l~~l~----hpniv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l--~~~~-~~~~l~~~~~~~i~~~i 610 (796)
+.+|+.-+.+++ +...+.+-..+.+ ....++||||++|+.+.+.- ...+ ....+.......++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 333444344332 3333433333322 34678999999999997742 2211 11112222233333333
Q ss_pred HHHHHHHhhcCCCCeEEecCCCCCeEecCCC----cEEEeeeccccccCC
Q 003780 611 ANALSYLHHDCMPSIVHRDISSNNILLNSKL----EAFVADFGTARLLDS 656 (796)
Q Consensus 611 a~~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a~~~~~ 656 (796)
... |++|+|++|.||+++.++ .++++|||++..++.
T Consensus 277 -------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 345 999999999999999988 899999999987754
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.25 E-value=7.4e-13 Score=146.64 Aligned_cols=246 Identities=26% Similarity=0.287 Sum_probs=139.7
Q ss_pred cCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccE
Q 003780 118 GALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLI 197 (796)
Q Consensus 118 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 197 (796)
..+..++.+++..|.|.. +-..+..+++|+.|+|.+|+|..+ ...+..+++|++|+|++|.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~--------------- 131 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKIT--------------- 131 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccc---------------
Confidence 344555555566666652 233355556666666666666532 222444445555555555544
Q ss_pred EEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC-ccccCCcccceeeccccc
Q 003780 198 LSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP-PEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 198 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 276 (796)
.+ ..+..++.|+.|++++|.|+.. ..+..++.|+.+++++|+++..-+ . ...+.+++.++++.|.
T Consensus 132 ---------~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~ 197 (414)
T KOG0531|consen 132 ---------KL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNS 197 (414)
T ss_pred ---------cc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCc
Confidence 33 2233344455555555555522 234445666666666666653322 1 3556666667777776
Q ss_pred ccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcc
Q 003780 277 IEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPE 356 (796)
Q Consensus 277 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 356 (796)
+... ..+..+..+..+++..|.++..-+........|+.+++++|.+. ..+..+..+..+..|++.+|++... ...
T Consensus 198 i~~i--~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~-~~~ 273 (414)
T KOG0531|consen 198 IREI--EGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL-EGL 273 (414)
T ss_pred hhcc--cchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc-ccc
Confidence 6532 23444555666677788777433222111114899999999998 3446678889999999999999843 222
Q ss_pred ccccccceEEecccccCCC---CC----ccccccccccccCCCCcccCC
Q 003780 357 IGLMKLEYLDLSHNKLNGT---IP----PFLYHRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 357 ~~~~~L~~L~l~~N~l~~~---~p----~~~~~~~~l~l~~N~l~~~~p 398 (796)
-..+.+..+.+..|++... .. ........+.+.+|......+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 3456778888888887632 11 112233456777776665444
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.20 E-value=8.3e-12 Score=118.42 Aligned_cols=80 Identities=33% Similarity=0.413 Sum_probs=15.3
Q ss_pred CCcEEeccCCcccccCCcCcc-CCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhh-hccCccceee
Q 003780 98 GLESLSLRFNYLFGSIPSQVG-ALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSL-CQLTKLITMA 175 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 175 (796)
.+++|+|++|.|+.+ +.++ .+.+|+.||||+|.|+.. +.+..+++|++|+|++|+|+.. +..+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEE
Confidence 445555555555432 1233 344555555555555522 1344455555555555555532 2222 2344455555
Q ss_pred ccccccC
Q 003780 176 LSRNGLH 182 (796)
Q Consensus 176 L~~N~l~ 182 (796)
|++|+|.
T Consensus 95 L~~N~I~ 101 (175)
T PF14580_consen 95 LSNNKIS 101 (175)
T ss_dssp -TTS---
T ss_pred CcCCcCC
Confidence 5555544
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.20 E-value=2e-12 Score=126.69 Aligned_cols=129 Identities=29% Similarity=0.292 Sum_probs=77.1
Q ss_pred CCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEc
Q 003780 121 SKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSL 200 (796)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 200 (796)
..|++||||+|.|+ .+.+...-+|.++.|++|+|.|... +.+..|++|+.|||++|.++. +..+-..|.|.+.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 45666666666666 4445555556666666666666532 235666666666666666652 2333445566666666
Q ss_pred ccccccCcchhhhcCCCCccccccCCccccccC-CCcccccCccceEEeccccccc
Q 003780 201 DSNKLSGMLHQELGKLKNLVALNVGGNKLMGPI-PSTLFRLTNLTYLYLHSNHLNG 255 (796)
Q Consensus 201 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~ 255 (796)
+.|.|... ..++++-+|..||+++|+|.... -..++++|.|+.|.|.+|.+.+
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 66666532 34556666667777777665321 2356677777777777777764
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=2.1e-11 Score=115.74 Aligned_cols=128 Identities=31% Similarity=0.401 Sum_probs=53.8
Q ss_pred CccCCCCCcEeecccCcCCCCCCCCCC-CCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCC
Q 003780 116 QVGALSKLRYLDFSFNNLTGSIPPELG-SLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNN 194 (796)
Q Consensus 116 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 194 (796)
.+.+..++++|+|++|.|+. + +.++ .+.+|+.|||++|.|+.. ..+..+++|++|++++|+|+...+.....+++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 35566789999999999994 3 3566 589999999999999954 35888999999999999999653333356899
Q ss_pred ccEEEcccccccCcch-hhhcCCCCccccccCCccccccCCC----cccccCccceEEe
Q 003780 195 LLILSLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIPS----TLFRLTNLTYLYL 248 (796)
Q Consensus 195 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----~l~~l~~L~~L~L 248 (796)
|++|+|++|+|..... ..+..+++|+.|+|.+|.+... +. .+..+|+|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 9999999999986533 5678899999999999999843 22 4567899998874
No 474
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=6.1e-11 Score=114.49 Aligned_cols=131 Identities=20% Similarity=0.208 Sum_probs=96.2
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCcee-eEEeEEEecceeeEEEeeccC
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIV-KLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv-~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.+.++.|.++.||+++.. ++.|++|........ ...+..|+++++.+.+.+++ +++.+. ....++||||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 457899999999999875 778999987654321 12467889999988655544 444443 3345799999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC--CCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC--MPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
.++.+. . . ....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~--~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE--D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc--c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 887543 0 0 11345678999999999972 12369999999999999 66899999998863
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=1.8e-12 Score=130.39 Aligned_cols=185 Identities=18% Similarity=0.177 Sum_probs=91.8
Q ss_pred CCCCCCcEEeccCCcccc----cCCcCccCCCCCcEeecccC---cCCCCCCCC-------CCCCCCCCEEEecCCCCCC
Q 003780 94 SCFPGLESLSLRFNYLFG----SIPSQVGALSKLRYLDFSFN---NLTGSIPPE-------LGSLRNLEVLNLKGNNLNG 159 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n---~l~~~~p~~-------~~~l~~L~~L~L~~N~l~~ 159 (796)
..+..++.|+||+|.+.. .+...+.+.++|+..++|+= ++...+|+. +...++|++||||.|-+..
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 334556666666666642 23344555566666666642 222233332 3344567777777777654
Q ss_pred CCchh----hhccCccceeeccccccCCCCCcc-------------ccCCCCccEEEcccccccCcc----hhhhcCCCC
Q 003780 160 AIPSS----LCQLTKLITMALSRNGLHGPIPSA-------------IGDLNNLLILSLDSNKLSGML----HQELGKLKN 218 (796)
Q Consensus 160 ~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~-------------~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~ 218 (796)
..+.. +..++.|++|.|.+|.+.-.--.. ...-+.|+.+...+|++..-. ...|...+.
T Consensus 107 ~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 107 KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 43333 334566777777777665211111 122345666666666655322 233445555
Q ss_pred ccccccCCcccccc----CCCcccccCccceEEecccccccc----CCccccCCcccceeeccccccc
Q 003780 219 LVALNVGGNKLMGP----IPSTLFRLTNLTYLYLHSNHLNGS----IPPEIGNMTGILKVDMSMNNIE 278 (796)
Q Consensus 219 L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 278 (796)
|+.+.++.|.|... +...|..+++|+.|||..|-|+.. +...+..+++|+.|+++++.+.
T Consensus 187 leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 55555555555411 122344455555555555555421 1223333444444444444444
No 476
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.14 E-value=1.1e-12 Score=131.91 Aligned_cols=98 Identities=26% Similarity=0.268 Sum_probs=52.5
Q ss_pred CccCCCCCcEeecccCcCCC----CCCCCCCCCCCCCEEEecCC---CCCCCCchhhhccCccceeeccccccCCCCCcc
Q 003780 116 QVGALSKLRYLDFSFNNLTG----SIPPELGSLRNLEVLNLKGN---NLNGAIPSSLCQLTKLITMALSRNGLHGPIPSA 188 (796)
Q Consensus 116 ~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~N---~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 188 (796)
....+..++.|+||+|.+.. .+.+.+.+.++|+..++|+= ++...+|.++..+ -..
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l-----------------~~a 87 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKML-----------------SKA 87 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHH-----------------HHH
Confidence 45566778888888887763 23334566677777777653 2222344433221 112
Q ss_pred ccCCCCccEEEcccccccCcch----hhhcCCCCccccccCCcccc
Q 003780 189 IGDLNNLLILSLDSNKLSGMLH----QELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 189 ~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~ 230 (796)
+...+.|++|+||+|-|....+ ..+..+.+|+.|.|.+|.+.
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg 133 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG 133 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC
Confidence 2333455555555555543322 22344566666666666654
No 477
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.13 E-value=6.7e-10 Score=107.65 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=98.9
Q ss_pred eeeecccceeEEEEEccC-------CcEEEEEEeccccch----------h---------hHHHHHH----HHHHHHHhh
Q 003780 505 YCIGTGGYGSVYKAQLPN-------GKVVALKKLHRAETE----------E---------TTFFNSF----QNEAHVLSK 554 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~----------~---------~~~~~~~----~~E~~~l~~ 554 (796)
..||.|.-+.||.|...+ +..+|||+.+-.... + ....+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 579999987532100 0 0112233 389999999
Q ss_pred cCC--CceeeEEeEEEecceeeEEEeeccCCcHHH-HHhhcCcccccCHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecC
Q 003780 555 IAH--RNIVKLYGFCLHKKCMFLIYKYMKRGSLFC-FLRNDYEAVVLDWTMRVNIIKCVANALSYL-HHDCMPSIVHRDI 630 (796)
Q Consensus 555 l~h--pniv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~dl 630 (796)
+.. -++.+++++ ...++||||+.++.+.. .+++. .++......+..+++.+|.++ |.. ++||+||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 455566654 46789999998754421 22221 244455677889999999999 777 9999999
Q ss_pred CCCCeEecCCCcEEEeeeccccccC
Q 003780 631 SSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 631 kp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
++.||++++ +.+.++|||.+....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 689999999987654
No 478
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=1.3e-11 Score=121.12 Aligned_cols=132 Identities=26% Similarity=0.292 Sum_probs=69.4
Q ss_pred CCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceee
Q 003780 192 LNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVD 271 (796)
Q Consensus 192 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 271 (796)
.+.|++||||+|.|+. +.++..-+|.++.|++++|.|... +.+..+++|+.|||++|.++ .+..+-..+.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchhh-hhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 3455556666665552 233344455555555555555422 22455555555555555555 3333333444455555
Q ss_pred cccccccccCccccccccccccccccCccccCccccccccccccceecccccccccC-CCcccCCCCCCcEEEeeccccc
Q 003780 272 MSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGP-IPPEIGKCSELRNITLRNNNLS 350 (796)
Q Consensus 272 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 350 (796)
|+.|.|... ..+..+-+|..||+++|++... --..++++|-|+.|.|.+|.+.
T Consensus 359 La~N~iE~L--------------------------SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIETL--------------------------SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhhh--------------------------hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 555554421 1233334555556666655431 1245778888888888888887
Q ss_pred CCC
Q 003780 351 GSI 353 (796)
Q Consensus 351 ~~~ 353 (796)
+..
T Consensus 413 ~~v 415 (490)
T KOG1259|consen 413 GSV 415 (490)
T ss_pred ccc
Confidence 543
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=5e-11 Score=129.48 Aligned_cols=250 Identities=18% Similarity=0.167 Sum_probs=175.0
Q ss_pred HHhcCCccceeeecccceeEEEEEc--cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecce
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQL--PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 572 (796)
....+|..+..||.|.|+.|++... .++..|++|.+........... .-..|+-+...+ .|.+++++...+.....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 3456889999999999999999853 4688999998876654432211 123445444444 48888888877777777
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeeccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFGTA 651 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a 651 (796)
.++=-||+++++...... -...++...++++..|++.++.++|+. .++|+|+||+||++..+ +.-+++|||.+
T Consensus 341 ~~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred ccCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 789999999998776552 223477888899999999999999998 99999999999999986 77789999998
Q ss_pred cccCCCCCCccccccccCcc--CccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 652 RLLDSDSSNRTIVAGTYGYI--APELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
..+... .......-++. +|+......+..++|++|||.-+.+.++|..--.... +. ..+....
T Consensus 415 t~~~~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~----~~i~~~~ 479 (524)
T KOG0601|consen 415 TRLAFS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QS----LTIRSGD 479 (524)
T ss_pred ccccee---cccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cc----eeeeccc
Confidence 743211 11112223344 5555566778889999999999999998875422111 00 1111121
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.+.... ....++.+.+.+..+++..||.+.+...+.+.
T Consensus 480 ~p~~~~----~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 480 TPNLPG----LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ccCCCc----hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111111 11336677888999999999999888766543
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.07 E-value=3e-11 Score=137.39 Aligned_cols=252 Identities=21% Similarity=0.235 Sum_probs=172.7
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
...+.+.+.+.+-.|.++.++-+.-. .|...++|.......-....++....+-.+.-..++|-++...-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34567777888889999999887532 34344444333222111111233333444444455677776665555566788
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+|++|..+++|...++.... .+.......+..+.++.+|||+. .+.|||++|.|.+...+++.+++|||.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999999987652 44444455566678899999998 7999999999999999999999999843321
Q ss_pred CC---------------------CC----------CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 003780 655 DS---------------------DS----------SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703 (796)
Q Consensus 655 ~~---------------------~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p 703 (796)
.- .. .......||+.|.+||...+......+|+|+.|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 10 00 011224589999999999999999999999999999999999999
Q ss_pred CcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 003780 704 GELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQ 763 (796)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 763 (796)
|.... .+..+..+.......... +.....+..+++...+..+|.+|-.|.
T Consensus 1035 ~na~t--------pq~~f~ni~~~~~~~p~g--~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAET--------PQQIFENILNRDIPWPEG--PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcc--------hhhhhhccccCCCCCCCC--ccccChhhhhhhhhhhccCchhccCcc
Confidence 88432 233333444433333221 222334467888899999999997776
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.6e-09 Score=100.91 Aligned_cols=133 Identities=21% Similarity=0.338 Sum_probs=100.2
Q ss_pred eeecccceeEEEEEccCCcEEEEEEe-cc----ccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeec
Q 003780 506 CIGTGGYGSVYKAQLPNGKVVALKKL-HR----AETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 506 ~lg~G~~g~Vy~~~~~~g~~vavK~~-~~----~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
.+++|+-+.+|.+.+. |..+++|.= .+ +..+..-......+|+.++.+++--.|-...=+..+++...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999775 444555532 22 22222222346788999999987555555555666788888999999
Q ss_pred cCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 581 KRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 581 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
+|..|.+.+... ...++..+-+-+.-||.. +|+|+||.++||.+..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999998888754 245677777888899999 999999999999998865 99999999974
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.04 E-value=1.5e-10 Score=136.61 Aligned_cols=273 Identities=25% Similarity=0.255 Sum_probs=128.1
Q ss_pred CCCCcEEeccCCcccccCCcCccCCCCCcEeecccCc--CCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 96 FPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN--LTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
....+...+-+|.+.. ++.... .++|++|-+..|. +....++.|..++.|+.|||++|.=.+.+|..++.|-+|++
T Consensus 522 ~~~~rr~s~~~~~~~~-~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEH-IAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchhh-ccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 3445555555555542 222222 2256666666654 33233333555666666666665544556666666666666
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc--ccCCCcccccCccceEEeccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM--GPIPSTLFRLTNLTYLYLHSN 251 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~l~~l~~L~~L~L~~N 251 (796)
|+|++..++ .+|..+.+|..|.+|++..+.-...++.....+++|++|.+..-... ...-..+.++.+|+.|.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 666666665 45566666666666666655544444555555666666655544311 111222333444444443222
Q ss_pred cccccCCccccCCcccc----eeecccccccccCccccccccccccccccCccccCcccccccc------ccccceeccc
Q 003780 252 HLNGSIPPEIGNMTGIL----KVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG------LISLKGLDLS 321 (796)
Q Consensus 252 ~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~------l~~L~~L~Ls 321 (796)
.. .+-..+..++.|. .+.+.++... ..+.++..+.+|+.|.+.++.+.......... ++++..+...
T Consensus 679 s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~ 755 (889)
T KOG4658|consen 679 SV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSIL 755 (889)
T ss_pred hh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhh
Confidence 22 0111122222222 2222222222 33445566666666666666665322222111 2222222222
Q ss_pred ccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCC
Q 003780 322 NNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGT 375 (796)
Q Consensus 322 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~ 375 (796)
++... ..+.+.--.++|+.|++..+.....+.+.. .+..+..+-+..+.+.+.
T Consensus 756 ~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 756 NCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 22211 222333345777777777766554433332 344555555666665543
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=1.9e-09 Score=109.10 Aligned_cols=143 Identities=20% Similarity=0.221 Sum_probs=108.9
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC--CceeeEEeEEEec---ceeeEEEee
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH--RNIVKLYGFCLHK---KCMFLIYKY 579 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~---~~~~lV~e~ 579 (796)
+.++.|..+.||++...+|+.+++|........ .....+..|+++++.+++ ..+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998877789999987655432 123468899999999975 3457777777654 367899999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC-------------------------------------- 621 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 621 (796)
++++++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999888765431 12566677778888888888887521
Q ss_pred ---------------CCCeEEecCCCCCeEecC--CCcEEEeeeccccc
Q 003780 622 ---------------MPSIVHRDISSNNILLNS--KLEAFVADFGTARL 653 (796)
Q Consensus 622 ---------------~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~ 653 (796)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 56688999998864
No 484
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.00 E-value=5.9e-09 Score=96.43 Aligned_cols=146 Identities=18% Similarity=0.250 Sum_probs=105.9
Q ss_pred cceeeecccceeEEEEEccCCcEEEEEEec-----cccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLH-----RAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~-----~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
....+.+|+-+.|+++.+. |+.+.||.=. .+..+..-..+...+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5678999999999999885 7777776332 222222223456789999999887545544444556666777999
Q ss_pred eeccC-CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEeeeccccc
Q 003780 578 KYMKR-GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVADFGTARL 653 (796)
Q Consensus 578 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a~~ 653 (796)
||+++ .++.+++.........+ ......+..|-+.+.-||.. +|+|+||..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 47788876654332222 22367888899999999999 9999999999999976653 47999999864
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.94 E-value=4.2e-10 Score=132.95 Aligned_cols=251 Identities=24% Similarity=0.310 Sum_probs=166.8
Q ss_pred CCCcEEeccCCc--ccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 97 PGLESLSLRFNY--LFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 97 ~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
+.|++|-+..|. +..+.+..|..++.|++||||+|.=-+.+|..+++|-+|++|+|++..++ .+|..+.+|++|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 478899999886 55454556888999999999998766789999999999999999999999 889999999999999
Q ss_pred eccccccCCCCCccccCCCCccEEEccccc--ccCcchhhhcCCCCccccccCCccccccCCCcccccCccc----eEEe
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDSNK--LSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLT----YLYL 248 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~L~L 248 (796)
++..+.-...+|.....|++|++|.|..-. .....-..+.++.+|+.|........ +-..+..++.|. .+.+
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVL--LLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhH--hHhhhhhhHHHHHHhHhhhh
Confidence 999988776778888889999999987654 22333445566666666665443331 111222333333 3333
Q ss_pred ccccccccCCccccCCcccceeecccccccccCcccccc------ccccccccccCccccCccccccccccccceecccc
Q 003780 249 HSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTR------LSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSN 322 (796)
Q Consensus 249 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 322 (796)
.++... ..+..+..+.+|+.|.+.+..+.......+.. ++++..+...++..- ..+.+..-.++|+.|.+..
T Consensus 702 ~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~ 779 (889)
T KOG4658|consen 702 EGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVS 779 (889)
T ss_pred cccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEec
Confidence 333333 44556777888888888877776433322221 122222222222211 2233334457888888888
Q ss_pred cccccCCCcccCCCCCCcEEEeecccccCC
Q 003780 323 NKLSGPIPPEIGKCSELRNITLRNNNLSGS 352 (796)
Q Consensus 323 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 352 (796)
+.....+.+....+..+..+-+..+.+.+.
T Consensus 780 ~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 780 CRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ccccccCCCHHHHhhhcccEEecccccccc
Confidence 887766666666677777667777777654
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=9.8e-10 Score=85.74 Aligned_cols=61 Identities=44% Similarity=0.548 Sum_probs=38.8
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCC
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNL 157 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l 157 (796)
|+|++|++++|++..+.+..|.++++|++|++++|.|+...|..|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666666666666556666666666666666666655556666666666666666654
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.85 E-value=1.3e-09 Score=84.97 Aligned_cols=57 Identities=40% Similarity=0.538 Sum_probs=21.2
Q ss_pred CCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccc
Q 003780 147 LEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSN 203 (796)
Q Consensus 147 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 203 (796)
|++|+|++|+|+...+..|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333333333333332333333333333333333333333333333333333333333
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.82 E-value=4e-08 Score=94.99 Aligned_cols=129 Identities=24% Similarity=0.318 Sum_probs=84.2
Q ss_pred eEEEEEccCCcEEEEEEeccccc-----------------------hhhHHHHHHHHHHHHHhhcCCC--ceeeEEeEEE
Q 003780 514 SVYKAQLPNGKVVALKKLHRAET-----------------------EETTFFNSFQNEAHVLSKIAHR--NIVKLYGFCL 568 (796)
Q Consensus 514 ~Vy~~~~~~g~~vavK~~~~~~~-----------------------~~~~~~~~~~~E~~~l~~l~hp--niv~l~~~~~ 568 (796)
.||.|...+|..+|+|..+.... ..........+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988999999998754210 0111234578999999999755 456666543
Q ss_pred ecceeeEEEeecc--CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHH-HhhcCCCCeEEecCCCCCeEecCCCcEEE
Q 003780 569 HKKCMFLIYKYMK--RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSY-LHHDCMPSIVHRDISSNNILLNSKLEAFV 645 (796)
Q Consensus 569 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~ivH~dlkp~NIll~~~~~~kl 645 (796)
..++||||++ |..+..+.... ++......++.++++.+.. +|.. ||+|+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 4579999999 65565444322 1123345677777775555 4677 99999999999999988 9999
Q ss_pred eeeccccccC
Q 003780 646 ADFGTARLLD 655 (796)
Q Consensus 646 ~Dfg~a~~~~ 655 (796)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999887543
No 489
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.75 E-value=1.5e-07 Score=96.70 Aligned_cols=144 Identities=19% Similarity=0.135 Sum_probs=101.4
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchhh--------HHHHHHHHHHHHHhhcCCC--ceeeEEeEEEe-----
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEET--------TFFNSFQNEAHVLSKIAHR--NIVKLYGFCLH----- 569 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~--------~~~~~~~~E~~~l~~l~hp--niv~l~~~~~~----- 569 (796)
+.+-+.....|+++.. +|+.|.||+......... .....+.+|...+.++... .+.+++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455455555777765 578999997754432110 0011477888888887432 23445555543
Q ss_pred cceeeEEEeeccCC-cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-------CC
Q 003780 570 KKCMFLIYKYMKRG-SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-------KL 641 (796)
Q Consensus 570 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-------~~ 641 (796)
....++|+|++++. +|.+++.... ....+...+..++.++++.+.-||.. ||+|+|++++|||++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 23578999999986 8988875422 12345667788999999999999999 9999999999999975 46
Q ss_pred cEEEeeeccccc
Q 003780 642 EAFVADFGTARL 653 (796)
Q Consensus 642 ~~kl~Dfg~a~~ 653 (796)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999998864
No 490
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.75 E-value=7e-10 Score=109.16 Aligned_cols=84 Identities=29% Similarity=0.356 Sum_probs=42.9
Q ss_pred CCCCcEeecccCcCCC--CCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCC-CCCccccCCCCcc
Q 003780 120 LSKLRYLDFSFNNLTG--SIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHG-PIPSAIGDLNNLL 196 (796)
Q Consensus 120 l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 196 (796)
.++++.|||.+|.|+. .+-..+.+||.|++|+|+.|+++..|...-..+.+|+.|.|.+..+.- .....+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3556666666666652 222234556666666666666653332111344556666665555541 1223344455555
Q ss_pred EEEcccc
Q 003780 197 ILSLDSN 203 (796)
Q Consensus 197 ~L~L~~N 203 (796)
.|++|.|
T Consensus 150 elHmS~N 156 (418)
T KOG2982|consen 150 ELHMSDN 156 (418)
T ss_pred hhhhccc
Confidence 5555555
No 491
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.73 E-value=3.1e-07 Score=97.84 Aligned_cols=169 Identities=20% Similarity=0.311 Sum_probs=128.6
Q ss_pred ceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE----ecceeeEEEeeccC-CcH
Q 003780 512 YGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL----HKKCMFLIYKYMKR-GSL 585 (796)
Q Consensus 512 ~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~----~~~~~~lV~e~~~~-gsL 585 (796)
..+.|++. ..||..|+.|+++..+..... ....-+++.+++.|+|||++.+++. .+...++||+|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 35778995 458999999999766544321 2334578899999999999998876 34578999999986 477
Q ss_pred HHHHhhcC------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 586 FCFLRNDY------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 586 ~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
.++.-... +....++...+.++.|++.||.++|+. |..-+-|.+++|+++.+.+++|+..|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 76643211 223467889999999999999999999 999999999999999999999998888876
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p 703 (796)
+..+.. |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 443 l~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 443 LQEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ecCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 654431 11111 1356888999999999999644
No 492
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=5.3e-07 Score=93.61 Aligned_cols=258 Identities=15% Similarity=0.192 Sum_probs=152.6
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEE------Eec-cee
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFC------LHK-KCM 573 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~------~~~-~~~ 573 (796)
...+.+|+|+-+.+|-.-. -+..+.|+.+....... .+.++.|... .||-+-.=+.|= -.+ ...
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3457799999999997622 12235577776554321 1123334433 466433211111 111 224
Q ss_pred eEEEeeccCC-cHHHHH---hhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 574 FLIYKYMKRG-SLFCFL---RNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 574 ~lV~e~~~~g-sL~~~l---~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
-+.|..+++. ....+. ++...-...+|...++.+..+|.+.+.||.. |.+-+|+.++|+|+++++.+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 5667766654 222222 1222234578999999999999999999999 99999999999999999999998855
Q ss_pred cccccCCCCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhC-CCCCcccccCCCCCchhhhHHH-
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMG-RHPGELLSSLSSPSSDQKIMLI- 722 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~- 722 (796)
.-.... ......-..|...|.+||... +..-+...|-|.+|+++++++.| +.||.............+..+.
T Consensus 163 sfqi~~-ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQINA-NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceeecc-CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 433321 222223345888999999754 33455678999999999999987 8998754332211111110110
Q ss_pred -H-----hhcCCCCCccchhhHH-HHHHHHHHHHHcCCCC--CCCCCCHHHHHHHHhh
Q 003780 723 -D-----VLDSRLSPPVDRMVMQ-DIVLVTTVALACLHSK--PKFRPTMQRVCQEFLT 771 (796)
Q Consensus 723 -~-----~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~ 771 (796)
. .-.....+....-+.. -...+.-+..+|+... |.-|||++.-+..|.+
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 0 0011111111110111 1223666777887653 5679999877766544
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=3.3e-07 Score=90.80 Aligned_cols=138 Identities=23% Similarity=0.248 Sum_probs=98.0
Q ss_pred CccceeeecccceeEEEEEccCCcEEEEEEeccccch-----------------h--hHHHHHHHHHHHHHhhcCCC--c
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETE-----------------E--TTFFNSFQNEAHVLSKIAHR--N 559 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------~--~~~~~~~~~E~~~l~~l~hp--n 559 (796)
..+...||.|.-+.||.|..++|.++|||.=+..... . ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4556789999999999999999999999943211000 0 01123567899999998754 6
Q ss_pred eeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 560 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
|.+.+++ +...+||||++|--|...- ++......++..|++-+..+-.. |+||+|+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666654 3567999999996664321 12333344555555555555566 9999999999999999
Q ss_pred CCcEEEeeeccccc
Q 003780 640 KLEAFVADFGTARL 653 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~ 653 (796)
+|.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999976654
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=6.9e-10 Score=121.16 Aligned_cols=125 Identities=26% Similarity=0.262 Sum_probs=62.0
Q ss_pred cceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccc
Q 003780 243 LTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSN 322 (796)
Q Consensus 243 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 322 (796)
|...+.+.|++. ....++.-++.|+.|+|++|+++... .+..++.|++|||++|.+.-..--...++ .|..|.|++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrn 241 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRN 241 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeecc
Confidence 444455555554 33334444455555555555555332 44555555555555555552211112222 255566666
Q ss_pred cccccCCCcccCCCCCCcEEEeecccccCCC--CccccccccceEEecccccC
Q 003780 323 NKLSGPIPPEIGKCSELRNITLRNNNLSGSI--PPEIGLMKLEYLDLSHNKLN 373 (796)
Q Consensus 323 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~L~~L~l~~N~l~ 373 (796)
|.++.. ..+.++.+|+.|||++|-|.+.- ...+.+..|+.|+|.+|++.
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 655421 33455566666666666665421 22223556666666666664
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=1.4e-08 Score=111.97 Aligned_cols=152 Identities=20% Similarity=0.245 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCc----c-----ccccccCccCccccc
Q 003780 607 IKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNR----T-----IVAGTYGYIAPELAY 677 (796)
Q Consensus 607 ~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~----~-----~~~gt~~y~aPE~~~ 677 (796)
+.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+....+..... + ...-...|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34556899999987 489999999999999999999999999876544321110 0 112345799999999
Q ss_pred cCCcCcchhHHHHHHHHHHHHhCCCC-CcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCC
Q 003780 678 TMVVTEKCDVYSFGVVALEVLMGRHP-GELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKP 756 (796)
Q Consensus 678 ~~~~~~~~DVwSlGv~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 756 (796)
....+.++|+||+||++|.+..|..+ ++......... ... ...+..... . ...-+.++.+=+.+++..++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----~~~-~~~~~~~~~-~---s~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----FSR-NLLNAGAFG-Y---SNNLPSELRESLKKLLNGDS 253 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhh----hhh-ccccccccc-c---cccCcHHHHHHHHHHhcCCc
Confidence 98888999999999999999955554 33221110000 000 000000000 0 11122346677788999999
Q ss_pred CCCCCHHHHHHHH
Q 003780 757 KFRPTMQRVCQEF 769 (796)
Q Consensus 757 ~~RPs~~evl~~L 769 (796)
..||++.++....
T Consensus 254 ~~rp~~~~l~~~~ 266 (700)
T KOG2137|consen 254 AVRPTLDLLLSIP 266 (700)
T ss_pred ccCcchhhhhccc
Confidence 9999888776653
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.57 E-value=1.3e-09 Score=119.16 Aligned_cols=127 Identities=28% Similarity=0.278 Sum_probs=68.0
Q ss_pred ccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEec
Q 003780 170 KLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLH 249 (796)
Q Consensus 170 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~ 249 (796)
+|...+.+.|.+. .+..++.-++.|+.|+|++|+++... .+..++.|+.|||+.|.+....--...++ +|+.|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeec
Confidence 4555555566655 34445555566666666666665442 55556666666666666652221122222 36666666
Q ss_pred cccccccCCccccCCcccceeecccccccccCc-cccccccccccccccCcccc
Q 003780 250 SNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIP-LELTRLSQLLYLSISSNMLS 302 (796)
Q Consensus 250 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~ 302 (796)
+|.++.. ..+.++.+|+.||+++|-|.+.-- ..+..+..|+.|+|.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6666522 234556666666666666654211 12344556666666666654
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.52 E-value=2e-08 Score=99.16 Aligned_cols=62 Identities=35% Similarity=0.425 Sum_probs=28.2
Q ss_pred CCCCCEEEecCCCCCC--CCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccc
Q 003780 144 LRNLEVLNLKGNNLNG--AIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKL 205 (796)
Q Consensus 144 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 205 (796)
.+.+++|||.+|+|+. .+-.-+.+++.|+.|+|+.|++...+...-..+.+|+.|-|.+..+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L 133 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGL 133 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCC
Confidence 3455666666666653 2222334555555555555555432221112334444444444433
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.44 E-value=3.3e-06 Score=82.08 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=101.3
Q ss_pred ecccceeEEEEEccCCcEEEEEEeccccchh---hHHHHHHHHHHHHHhhcCC--CceeeEEeEEEe---c--ceeeEEE
Q 003780 508 GTGGYGSVYKAQLPNGKVVALKKLHRAETEE---TTFFNSFQNEAHVLSKIAH--RNIVKLYGFCLH---K--KCMFLIY 577 (796)
Q Consensus 508 g~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~---~--~~~~lV~ 577 (796)
|.||-+.|++.... |+.+-+|+-...-... ......|.+|+..+.++.. -.+.++. ++.. + -..+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 66888889998764 4578888765221111 1124579999999998852 2244444 3321 1 2467999
Q ss_pred eeccC-CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc--EEEeeeccccc
Q 003780 578 KYMKR-GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE--AFVADFGTARL 653 (796)
Q Consensus 578 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~ 653 (796)
|-+++ -+|.+++.+.. ....+...+..++.++++.+.-||+. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97764 48988886532 22467777889999999999999999 9999999999999986667 89999976653
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.43 E-value=1.9e-08 Score=88.06 Aligned_cols=84 Identities=24% Similarity=0.269 Sum_probs=44.1
Q ss_pred CCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeec
Q 003780 193 NNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDM 272 (796)
Q Consensus 193 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 272 (796)
..|+..+|++|.+....+..-...+.++.|+|++|.|+ .+|..+..++.|+.|+++.|.+. ..|..+..+.++-.|+.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 34444455555555444444444445555555555555 34555555556666666665555 34444444555555555
Q ss_pred cccccc
Q 003780 273 SMNNIE 278 (796)
Q Consensus 273 s~N~l~ 278 (796)
.+|.+.
T Consensus 131 ~~na~~ 136 (177)
T KOG4579|consen 131 PENARA 136 (177)
T ss_pred CCCccc
Confidence 555544
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=2.4e-08 Score=87.42 Aligned_cols=105 Identities=22% Similarity=0.314 Sum_probs=61.2
Q ss_pred CCcEeecccCcCCCCCCCCC---CCCCCCCEEEecCCCCCCCCchhh-hccCccceeeccccccCCCCCccccCCCCccE
Q 003780 122 KLRYLDFSFNNLTGSIPPEL---GSLRNLEVLNLKGNNLNGAIPSSL-CQLTKLITMALSRNGLHGPIPSAIGDLNNLLI 197 (796)
Q Consensus 122 ~L~~L~Ls~n~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 197 (796)
.+..||||.+.|- -+++.. .....|+..+|++|.+.. .|..| ...+.++.|+|++|+|+ .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 4556677776654 344433 333455555777777763 34444 33446666777777766 34555666666666
Q ss_pred EEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 198 LSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 198 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
|+++.|.+. ..|..+..+.+|..|+..+|.+.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 666666665 33444555666666666666665
Done!