Query 003780
Match_columns 796
No_of_seqs 794 out of 5591
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 03:47:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 1.7E-51 5.7E-56 431.2 24.0 260 498-774 35-300 (307)
2 4b9d_A Serine/threonine-protei 100.0 7.4E-52 2.5E-56 439.9 20.7 254 498-768 23-277 (350)
3 4gt4_A Tyrosine-protein kinase 100.0 1.8E-51 6.2E-56 433.1 22.6 257 499-772 26-304 (308)
4 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-51 4.4E-56 432.4 20.9 258 499-774 13-289 (299)
5 4aoj_A High affinity nerve gro 100.0 4.7E-51 1.6E-55 434.0 24.7 258 499-774 41-319 (329)
6 4fih_A Serine/threonine-protei 100.0 3.3E-51 1.1E-55 434.2 23.0 251 499-769 74-325 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-51 1E-55 428.1 21.1 264 499-781 32-300 (311)
8 3hyh_A Carbon catabolite-derep 100.0 4.3E-50 1.5E-54 413.7 23.3 250 499-769 13-264 (275)
9 3fpq_A Serine/threonine-protei 100.0 8E-50 2.7E-54 415.5 25.1 248 502-768 29-283 (290)
10 4fie_A Serine/threonine-protei 100.0 5.8E-50 2E-54 435.1 23.9 251 499-769 151-402 (423)
11 4g3f_A NF-kappa-beta-inducing 100.0 4.9E-50 1.7E-54 424.0 20.6 250 498-771 57-313 (336)
12 3ubd_A Ribosomal protein S6 ki 100.0 4.1E-50 1.4E-54 419.6 16.7 244 499-762 24-271 (304)
13 3hmm_A TGF-beta receptor type- 100.0 4E-49 1.4E-53 416.4 23.8 266 499-773 3-296 (303)
14 4ase_A Vascular endothelial gr 100.0 1.1E-49 3.7E-54 426.9 19.5 265 492-772 57-345 (353)
15 4g31_A Eukaryotic translation 100.0 3.3E-48 1.1E-52 407.2 22.5 251 499-768 5-280 (299)
16 3rgz_A Protein brassinosteroid 100.0 1.4E-46 4.7E-51 449.9 21.8 353 73-425 319-753 (768)
17 4eco_A Uncharacterized protein 100.0 3.6E-46 1.2E-50 436.1 21.3 340 55-403 61-534 (636)
18 3rgz_A Protein brassinosteroid 100.0 1.1E-46 3.7E-51 450.8 16.1 366 27-402 11-439 (768)
19 4b99_A Mitogen-activated prote 100.0 1.1E-45 3.9E-50 402.8 22.6 259 498-769 53-346 (398)
20 4f9c_A Cell division cycle 7-r 100.0 1.2E-44 4E-49 390.7 21.8 198 494-705 16-248 (361)
21 3v5w_A G-protein coupled recep 100.0 5.4E-44 1.8E-48 404.9 22.3 254 498-769 188-451 (689)
22 3uto_A Twitchin; kinase, muscl 100.0 1.1E-43 3.8E-48 406.4 23.2 254 498-769 156-412 (573)
23 4ecn_A Leucine-rich repeat pro 100.0 1.4E-43 4.6E-48 421.0 23.0 329 64-402 315-773 (876)
24 3uim_A Brassinosteroid insensi 100.0 3E-43 1E-47 378.0 22.3 290 486-782 17-317 (326)
25 3p86_A Serine/threonine-protei 100.0 1E-42 3.5E-47 370.3 23.1 268 496-779 34-303 (309)
26 3fxz_A Serine/threonine-protei 100.0 5E-42 1.7E-46 363.0 24.3 251 498-769 19-271 (297)
27 2c30_A Serine/threonine-protei 100.0 2.1E-41 7.1E-46 362.4 25.8 265 486-770 22-297 (321)
28 4eqm_A Protein kinase; transfe 100.0 1.5E-41 5E-46 359.0 24.1 264 498-775 10-276 (294)
29 3fe3_A MAP/microtubule affinit 100.0 1.2E-41 4E-46 364.7 23.4 251 498-769 14-266 (328)
30 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-41 1.2E-45 359.2 26.4 261 498-776 9-284 (310)
31 1o6l_A RAC-beta serine/threoni 100.0 2.2E-41 7.6E-46 363.6 24.9 253 498-769 4-262 (337)
32 4dc2_A Protein kinase C IOTA t 100.0 1.5E-41 5.1E-46 371.6 23.6 260 498-768 51-319 (396)
33 2qkw_B Protein kinase; three-h 100.0 1.1E-41 3.7E-46 365.0 21.2 274 490-772 30-313 (321)
34 3a8x_A Protein kinase C IOTA t 100.0 4.1E-41 1.4E-45 363.2 24.6 259 499-768 9-276 (345)
35 3soa_A Calcium/calmodulin-depe 100.0 4.1E-41 1.4E-45 374.4 24.7 257 497-769 9-269 (444)
36 2nru_A Interleukin-1 receptor- 100.0 1.5E-40 5.2E-45 353.7 27.7 278 487-773 13-305 (307)
37 3niz_A Rhodanese family protei 100.0 9.2E-41 3.1E-45 355.8 25.9 260 497-768 19-301 (311)
38 2psq_A Fibroblast growth facto 100.0 4.8E-41 1.6E-45 366.6 24.0 259 498-773 80-363 (370)
39 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-41 6.3E-46 366.6 20.2 254 497-769 21-282 (353)
40 3zgw_A Maternal embryonic leuc 100.0 3E-41 1E-45 363.6 21.6 253 497-770 8-263 (347)
41 2yab_A Death-associated protei 100.0 7.5E-41 2.6E-45 362.8 24.4 258 497-770 10-275 (361)
42 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-40 4.4E-45 346.9 24.9 256 498-774 7-264 (268)
43 3c0i_A Peripheral plasma membr 100.0 5.3E-41 1.8E-45 363.9 22.0 259 498-769 23-288 (351)
44 3soc_A Activin receptor type-2 100.0 4.9E-41 1.7E-45 359.9 21.5 267 498-773 23-317 (322)
45 4hcu_A Tyrosine-protein kinase 100.0 5.4E-41 1.9E-45 350.0 21.1 255 498-773 9-265 (269)
46 1tki_A Titin; serine kinase, m 100.0 9.5E-41 3.2E-45 357.0 22.8 254 498-770 4-260 (321)
47 3kul_A Ephrin type-A receptor 100.0 1.5E-40 5E-45 356.5 23.9 258 498-774 48-313 (325)
48 2bdw_A Hypothetical protein K1 100.0 1.1E-40 3.7E-45 362.5 23.0 257 497-770 27-287 (362)
49 4euu_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 353.0 26.4 267 498-774 8-309 (319)
50 2r5t_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 364.2 21.5 257 498-773 37-295 (373)
51 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.4E-41 1.8E-45 360.2 20.1 252 498-770 8-261 (336)
52 1xjd_A Protein kinase C, theta 100.0 4.9E-41 1.7E-45 361.9 19.7 254 496-768 14-270 (345)
53 2y0a_A Death-associated protei 100.0 1.6E-40 5.4E-45 356.4 23.2 256 498-769 10-273 (326)
54 3lb7_A RAF proto-oncogene seri 100.0 2.5E-40 8.6E-45 351.7 24.2 262 498-775 35-301 (307)
55 3qd2_B Eukaryotic translation 100.0 1E-40 3.5E-45 359.0 21.5 253 497-768 4-326 (332)
56 1fot_A TPK1 delta, CAMP-depend 100.0 2.5E-40 8.4E-45 352.8 23.9 250 498-769 5-260 (318)
57 3q4u_A Activin receptor type-1 100.0 3.2E-40 1.1E-44 350.1 24.5 258 498-772 7-300 (301)
58 1ob3_A PFPK5, cell division co 100.0 1.4E-40 4.9E-45 350.5 21.5 258 499-768 2-281 (288)
59 2i0e_A Protein kinase C-beta I 100.0 1.9E-40 6.6E-45 358.4 22.6 253 497-768 18-277 (353)
60 3cbl_A C-FES, proto-oncogene t 100.0 9.2E-41 3.1E-45 365.7 20.1 258 497-773 112-373 (377)
61 4aw2_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 373.8 16.7 263 491-770 66-341 (437)
62 3vhe_A Vascular endothelial gr 100.0 5.5E-41 1.9E-45 365.5 18.3 268 490-773 13-354 (359)
63 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-40 6.3E-45 351.5 21.5 254 498-769 12-294 (298)
64 3o0g_A Cell division protein k 100.0 3.8E-40 1.3E-44 348.0 23.8 260 499-769 2-284 (292)
65 1ogq_A PGIP-2, polygalacturona 100.0 7.5E-41 2.6E-45 356.5 18.5 267 57-327 30-306 (313)
66 3dtc_A Mitogen-activated prote 100.0 2.3E-40 7.8E-45 345.6 21.5 256 498-771 6-270 (271)
67 1qcf_A Haematopoetic cell kina 100.0 1.8E-40 6.3E-45 372.3 22.2 266 497-783 186-453 (454)
68 4fr4_A YANK1, serine/threonine 100.0 3.9E-40 1.3E-44 359.1 24.1 253 499-768 15-272 (384)
69 3v8s_A RHO-associated protein 100.0 4.1E-41 1.4E-45 370.1 16.1 261 492-770 62-332 (410)
70 2qol_A Ephrin receptor; recept 100.0 1.5E-40 5.2E-45 362.9 20.3 256 498-772 44-307 (373)
71 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-40 1.3E-44 356.0 23.3 250 498-769 40-295 (350)
72 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8E-45 347.9 21.0 256 497-773 22-279 (283)
73 1csn_A Casein kinase-1; phosph 100.0 2.1E-40 7.3E-45 350.9 20.7 274 498-787 9-296 (298)
74 3tki_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45 355.1 20.4 255 498-770 6-264 (323)
75 3tt0_A Basic fibroblast growth 100.0 3.8E-40 1.3E-44 361.5 23.2 260 498-774 68-352 (382)
76 2vd5_A DMPK protein; serine/th 100.0 7.3E-41 2.5E-45 368.4 17.5 262 491-769 53-329 (412)
77 3v47_A TOLL-like receptor 5B a 100.0 1.4E-40 4.8E-45 374.5 20.2 340 59-399 6-413 (455)
78 3ugc_A Tyrosine-protein kinase 100.0 3.2E-40 1.1E-44 349.1 21.3 266 498-774 9-291 (295)
79 3a62_A Ribosomal protein S6 ki 100.0 5E-40 1.7E-44 352.6 22.9 253 498-769 16-278 (327)
80 1luf_A Muscle-specific tyrosin 100.0 3.9E-40 1.3E-44 356.4 21.9 264 496-776 44-337 (343)
81 2izr_A Casein kinase I isoform 100.0 1.8E-40 6.3E-45 356.8 19.1 259 498-773 8-280 (330)
82 3ork_A Serine/threonine protei 100.0 1.4E-40 4.9E-45 354.5 18.0 256 498-768 11-274 (311)
83 3l9p_A Anaplastic lymphoma kin 100.0 3.6E-40 1.2E-44 359.5 21.3 259 498-773 70-344 (367)
84 1rjb_A FL cytokine receptor; k 100.0 3E-40 1E-44 357.4 19.9 265 496-776 42-336 (344)
85 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-40 9.2E-45 354.3 19.2 251 505-769 17-272 (325)
86 2ivs_A Proto-oncogene tyrosine 100.0 7E-40 2.4E-44 349.7 22.3 259 498-773 22-310 (314)
87 1kob_A Twitchin; kinase, intra 100.0 9.4E-40 3.2E-44 357.3 23.8 254 498-769 50-306 (387)
88 2pmi_A Negative RE, cyclin-dep 100.0 6.6E-40 2.3E-44 350.3 22.1 261 498-769 4-295 (317)
89 2y94_A 5'-AMP-activated protei 100.0 7.7E-40 2.6E-44 366.4 23.5 252 498-769 15-268 (476)
90 3dbq_A Dual specificity protei 100.0 6E-40 2.1E-44 354.7 21.9 254 498-770 8-276 (343)
91 4ejn_A RAC-alpha serine/threon 100.0 2.4E-40 8.4E-45 370.8 19.5 253 498-769 147-406 (446)
92 3cok_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 344.6 20.3 254 498-769 10-264 (278)
93 3kk8_A Calcium/calmodulin depe 100.0 1.4E-39 4.9E-44 342.1 23.8 255 498-769 5-263 (284)
94 3fdn_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 342.0 22.8 252 498-770 8-260 (279)
95 2eue_A Carbon catabolite derep 100.0 6E-40 2.1E-44 343.2 20.7 250 499-769 13-264 (275)
96 3uc3_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 355.2 22.3 255 498-770 19-277 (361)
97 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-39 5.1E-44 346.5 23.4 249 498-769 56-306 (311)
98 3og7_A AKAP9-BRAF fusion prote 100.0 1E-39 3.5E-44 344.1 21.9 261 497-773 22-287 (289)
99 3kmu_A ILK, integrin-linked ki 100.0 1.2E-39 4E-44 340.0 22.0 254 498-773 9-269 (271)
100 2w4o_A Calcium/calmodulin-depe 100.0 6.1E-40 2.1E-44 355.1 20.5 253 497-769 51-307 (349)
101 1t46_A HOMO sapiens V-KIT hard 100.0 7.3E-40 2.5E-44 349.4 20.8 263 497-775 21-308 (313)
102 3hko_A Calcium/calmodulin-depe 100.0 8.7E-40 3E-44 353.9 21.5 265 494-770 21-333 (345)
103 2wqm_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 346.8 22.7 271 498-780 31-303 (310)
104 3qup_A Tyrosine-protein kinase 100.0 9.8E-40 3.3E-44 350.1 21.5 262 496-773 20-297 (323)
105 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.2E-40 2.5E-44 367.0 21.2 266 497-783 182-449 (452)
106 2rku_A Serine/threonine-protei 100.0 2.3E-39 7.7E-44 342.4 23.8 253 498-769 14-267 (294)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-39 4.2E-44 346.5 21.8 254 499-773 8-262 (307)
108 2h34_A Serine/threonine-protei 100.0 2.2E-39 7.7E-44 344.9 23.8 264 497-776 32-298 (309)
109 3t9t_A Tyrosine-protein kinase 100.0 9.6E-40 3.3E-44 340.0 20.5 255 498-773 7-263 (267)
110 2a2a_A Death-associated protei 100.0 1.9E-39 6.6E-44 347.4 23.3 256 498-769 11-274 (321)
111 2zmd_A Dual specificity protei 100.0 1.6E-39 5.4E-44 357.1 23.0 253 499-770 56-323 (390)
112 4agu_A Cyclin-dependent kinase 100.0 1.9E-39 6.6E-44 345.8 23.0 259 499-769 3-286 (311)
113 2qr7_A Ribosomal protein S6 ki 100.0 6.6E-40 2.2E-44 353.3 19.5 255 497-770 20-280 (342)
114 3gni_B Strad alpha; kinase fol 100.0 1.1E-39 3.8E-44 359.1 21.7 262 498-768 24-334 (389)
115 1u5q_A Serine/threonine protei 100.0 1.5E-39 5.3E-44 351.4 22.4 254 499-773 54-311 (348)
116 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-39 4.6E-44 368.4 22.9 259 498-768 184-449 (543)
117 3poz_A Epidermal growth factor 100.0 9.1E-40 3.1E-44 350.8 20.2 255 498-772 14-276 (327)
118 2x4f_A Myosin light chain kina 100.0 1.6E-39 5.5E-44 354.6 22.4 249 503-769 93-344 (373)
119 4f0f_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 338.8 25.0 256 498-772 18-287 (287)
120 3f3z_A Calcium/calmodulin-depe 100.0 3E-39 1E-43 338.3 23.3 253 497-769 7-263 (277)
121 1mp8_A Focal adhesion kinase 1 100.0 1.9E-39 6.6E-44 340.5 21.8 257 497-773 13-275 (281)
122 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-39 4E-44 344.9 20.2 274 498-787 8-293 (296)
123 1p4o_A Insulin-like growth fac 100.0 5.9E-40 2E-44 351.7 18.2 265 493-774 19-299 (322)
124 1opk_A P150, C-ABL, proto-onco 100.0 1E-39 3.4E-44 369.8 20.8 257 498-774 219-478 (495)
125 4hgt_A Casein kinase I isoform 100.0 9.2E-40 3.1E-44 345.6 18.8 275 497-787 7-293 (296)
126 2w5a_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 342.5 18.6 261 498-774 5-274 (279)
127 3j0a_A TOLL-like receptor 5; m 100.0 6.1E-39 2.1E-43 387.6 28.5 354 61-415 14-561 (844)
128 2owb_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 348.3 22.7 253 498-769 40-293 (335)
129 3op5_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 359.4 16.0 275 497-787 33-342 (364)
130 3kfa_A Tyrosine-protein kinase 100.0 7.2E-40 2.5E-44 345.1 17.7 258 497-774 11-271 (288)
131 2acx_A G protein-coupled recep 100.0 1.8E-39 6.3E-44 368.0 22.2 258 498-769 183-446 (576)
132 1k9a_A Carboxyl-terminal SRC k 100.0 3.3E-39 1.1E-43 361.4 23.9 252 497-773 191-444 (450)
133 4fvq_A Tyrosine-protein kinase 100.0 2.7E-39 9.3E-44 340.8 21.6 259 498-781 7-282 (289)
134 4e5w_A Tyrosine-protein kinase 100.0 2.5E-39 8.5E-44 343.4 21.4 264 499-772 21-300 (302)
135 3llt_A Serine/threonine kinase 100.0 1.3E-39 4.5E-44 354.7 19.7 206 489-706 25-261 (360)
136 2vgo_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 337.8 23.7 262 498-780 13-277 (284)
137 2pvf_A Fibroblast growth facto 100.0 4.1E-39 1.4E-43 346.9 23.3 260 498-774 34-318 (334)
138 2y7j_A Phosphorylase B kinase 100.0 5.6E-39 1.9E-43 349.8 24.5 263 491-769 86-361 (365)
139 4eut_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 356.3 22.2 265 498-772 8-307 (396)
140 3bhy_A Death-associated protei 100.0 3.8E-39 1.3E-43 338.6 22.2 256 498-769 4-267 (283)
141 2i1m_A Macrophage colony-stimu 100.0 1E-39 3.6E-44 351.5 18.3 263 495-773 42-325 (333)
142 4aaa_A Cyclin-dependent kinase 100.0 1.3E-39 4.3E-44 350.4 18.9 282 498-795 24-330 (331)
143 3a7i_A MST3 kinase, serine/thr 100.0 7.8E-39 2.7E-43 339.8 24.6 253 498-771 21-274 (303)
144 1qpc_A LCK kinase; alpha beta 100.0 3E-39 1E-43 338.7 21.1 259 497-776 11-271 (279)
145 1u59_A Tyrosine-protein kinase 100.0 5E-39 1.7E-43 338.5 22.5 261 499-779 9-277 (287)
146 3mtl_A Cell division protein k 100.0 1.2E-39 4.2E-44 349.3 18.1 258 499-769 2-283 (324)
147 3g33_A Cell division protein k 100.0 3.4E-39 1.1E-43 343.5 21.3 262 497-769 7-298 (308)
148 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-39 6E-44 348.9 19.3 262 496-770 31-321 (329)
149 3mdy_A Bone morphogenetic prot 100.0 1.1E-38 3.6E-43 344.2 25.4 265 496-774 34-331 (337)
150 2h6d_A 5'-AMP-activated protei 100.0 5.3E-39 1.8E-43 336.2 22.3 251 498-768 10-262 (276)
151 3oz6_A Mitogen-activated prote 100.0 2.3E-39 7.8E-44 356.4 20.2 259 497-769 7-330 (388)
152 3kex_A Receptor tyrosine-prote 100.0 1.6E-39 5.5E-44 348.6 18.4 255 499-773 13-275 (325)
153 3ttj_A Mitogen-activated prote 100.0 3.1E-39 1.1E-43 362.2 21.2 256 498-769 61-357 (464)
154 3dls_A PAS domain-containing s 100.0 1.7E-39 5.9E-44 349.4 18.4 248 497-770 22-277 (335)
155 2xir_A Vascular endothelial gr 100.0 2.7E-39 9.1E-44 345.6 19.5 267 491-773 19-309 (316)
156 3lxl_A Tyrosine-protein kinase 100.0 6.3E-39 2.2E-43 344.4 22.5 267 498-775 22-304 (327)
157 1xbb_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 340.1 20.4 257 498-774 15-279 (291)
158 3is5_A Calcium-dependent prote 100.0 7.9E-39 2.7E-43 336.6 22.6 254 498-768 21-279 (285)
159 3i6u_A CDS1, serine/threonine- 100.0 2.4E-39 8.1E-44 359.2 19.4 258 497-770 133-402 (419)
160 3nyv_A Calmodulin-domain prote 100.0 3.3E-39 1.1E-43 365.8 20.5 256 498-770 25-284 (484)
161 3brb_A Proto-oncogene tyrosine 100.0 6.6E-39 2.3E-43 342.1 21.5 263 496-774 31-308 (313)
162 2v62_A Serine/threonine-protei 100.0 2.3E-39 7.9E-44 350.4 18.1 267 498-775 36-329 (345)
163 3gxj_A TGF-beta receptor type- 100.0 1.9E-40 6.6E-45 352.1 9.4 261 498-775 2-298 (303)
164 2ac3_A MAP kinase-interacting 100.0 7.3E-39 2.5E-43 342.2 21.7 262 498-769 11-297 (316)
165 3n9x_A Phosphotransferase; mal 100.0 1.1E-38 3.8E-43 355.5 24.0 200 498-705 25-253 (432)
166 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-39 9.4E-44 369.6 19.5 266 497-783 265-532 (535)
167 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-38 3.7E-43 341.1 22.8 262 501-774 33-310 (318)
168 2yex_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 333.4 22.7 255 497-769 5-263 (276)
169 2clq_A Mitogen-activated prote 100.0 1.4E-38 4.8E-43 336.4 23.3 254 500-769 23-280 (295)
170 1nxk_A MAP kinase-activated pr 100.0 2.2E-38 7.6E-43 348.9 25.9 255 498-770 60-324 (400)
171 3mwu_A Calmodulin-domain prote 100.0 9.2E-39 3.2E-43 362.0 23.3 256 497-770 20-279 (486)
172 1b6c_B TGF-B superfamily recep 100.0 2.8E-38 9.4E-43 341.7 25.9 267 491-774 34-336 (342)
173 1mqb_A Ephrin type-A receptor 100.0 1.6E-38 5.5E-43 341.9 23.8 256 499-773 44-308 (333)
174 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-38 4.2E-43 335.4 22.5 250 497-769 9-281 (289)
175 2id5_A Lingo-1, leucine rich r 100.0 2.2E-38 7.4E-43 358.8 26.0 342 63-405 13-367 (477)
176 1t4h_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 333.5 24.9 250 499-768 26-283 (290)
177 3rp9_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43 360.6 21.7 264 498-769 52-398 (458)
178 3cc6_A Protein tyrosine kinase 100.0 1.2E-38 4.2E-43 334.4 22.0 257 497-773 10-272 (281)
179 2jam_A Calcium/calmodulin-depe 100.0 8.7E-39 3E-43 339.6 21.1 253 497-769 7-263 (304)
180 2a19_B Interferon-induced, dou 100.0 1.5E-38 5.3E-43 334.0 22.7 250 497-775 9-275 (284)
181 3pfq_A PKC-B, PKC-beta, protei 100.0 1.2E-38 4.1E-43 372.8 24.1 253 497-768 339-598 (674)
182 1ua2_A CAK, cell division prot 100.0 6.4E-39 2.2E-43 347.1 20.1 264 496-770 7-294 (346)
183 3com_A Serine/threonine-protei 100.0 1.9E-38 6.3E-43 338.7 23.0 255 497-771 27-282 (314)
184 3lm5_A Serine/threonine-protei 100.0 6.5E-39 2.2E-43 344.2 19.5 269 489-772 18-292 (327)
185 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-38 6.6E-43 360.9 24.5 257 497-770 34-304 (504)
186 2r3i_A Cell division protein k 100.0 1.8E-38 6.1E-43 336.4 22.4 261 499-770 3-286 (299)
187 1u46_A ACK-1, activated CDC42 100.0 8.6E-39 2.9E-43 337.3 19.9 260 498-774 17-284 (291)
188 2buj_A Serine/threonine-protei 100.0 9E-39 3.1E-43 341.7 20.2 265 498-778 28-310 (317)
189 1cm8_A Phosphorylated MAP kina 100.0 1.3E-38 4.4E-43 347.0 21.4 260 498-769 24-309 (367)
190 3byv_A Rhoptry kinase; malaria 100.0 1.1E-39 3.8E-44 357.3 13.1 246 498-768 72-360 (377)
191 1fvr_A Tyrosine-protein kinase 100.0 1.8E-38 6E-43 340.9 21.9 257 499-773 25-299 (327)
192 3lij_A Calcium/calmodulin depe 100.0 1.7E-38 5.8E-43 360.4 23.0 253 498-768 36-292 (494)
193 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-38 4.8E-43 371.6 22.9 329 72-403 32-542 (606)
194 2yfx_A Tyrosine-protein kinase 100.0 1.6E-38 5.6E-43 341.2 21.5 259 498-773 29-303 (327)
195 3lzb_A Epidermal growth factor 100.0 9.2E-39 3.1E-43 342.8 19.5 256 498-773 14-277 (327)
196 1byg_A CSK, protein (C-termina 100.0 8.9E-39 3E-43 334.9 19.0 252 498-774 20-273 (278)
197 3c1x_A Hepatocyte growth facto 100.0 7E-39 2.4E-43 349.4 18.9 255 500-773 90-354 (373)
198 3pls_A Macrophage-stimulating 100.0 2E-38 6.9E-43 335.7 21.7 258 500-775 22-288 (298)
199 3q60_A ROP5B; pseudokinase, tr 100.0 4E-39 1.4E-43 352.2 16.6 258 498-768 61-353 (371)
200 3sv0_A Casein kinase I-like; t 100.0 1.9E-38 6.5E-43 355.8 22.4 278 498-791 6-295 (483)
201 3f66_A Hepatocyte growth facto 100.0 2E-38 6.9E-43 335.8 21.4 259 498-775 24-292 (298)
202 3eqc_A Dual specificity mitoge 100.0 1.5E-38 5.2E-43 346.3 20.4 261 498-770 32-327 (360)
203 1phk_A Phosphorylase kinase; g 100.0 4.4E-38 1.5E-42 333.1 23.0 257 497-769 15-285 (298)
204 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-38 3.8E-43 342.4 18.7 258 493-769 18-288 (326)
205 2ycf_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 341.0 19.2 257 497-769 8-276 (322)
206 1vzo_A Ribosomal protein S6 ki 100.0 9.5E-39 3.2E-43 346.7 18.1 259 498-771 53-325 (355)
207 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-38 4.3E-43 347.5 18.9 252 497-774 63-339 (365)
208 2xrw_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 343.2 23.7 261 498-769 24-320 (371)
209 3mi9_A Cell division protein k 100.0 3.1E-38 1E-42 342.6 21.7 261 498-770 16-314 (351)
210 3t6q_A CD180 antigen; protein- 100.0 9.4E-38 3.2E-42 364.6 27.4 326 72-399 33-418 (606)
211 2ozo_A Tyrosine-protein kinase 100.0 1.5E-38 5.3E-43 368.5 20.4 260 499-778 335-602 (613)
212 3g2f_A Bone morphogenetic prot 100.0 1.5E-38 5E-43 343.0 18.7 268 498-776 12-320 (336)
213 4fl3_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43 368.1 21.5 250 505-774 375-631 (635)
214 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-38 3.7E-43 368.0 18.5 337 60-402 3-494 (549)
215 2j7t_A Serine/threonine-protei 100.0 1.5E-38 5E-43 337.5 18.0 256 497-770 17-278 (302)
216 2w1i_A JAK2; chromosomal rearr 100.0 5E-38 1.7E-42 337.2 22.3 265 498-773 40-321 (326)
217 3ll6_A Cyclin G-associated kin 100.0 2.6E-38 8.9E-43 341.0 20.0 255 498-774 27-308 (337)
218 2jii_A Serine/threonine-protei 100.0 1E-38 3.6E-43 346.3 16.8 262 498-776 41-338 (352)
219 3pg1_A Mitogen-activated prote 100.0 2.4E-38 8E-43 345.1 19.6 269 489-769 12-318 (362)
220 3fme_A Dual specificity mitoge 100.0 4E-38 1.4E-42 332.0 20.3 257 498-769 6-268 (290)
221 2fst_X Mitogen-activated prote 100.0 1.9E-38 6.4E-43 345.4 17.9 255 498-769 28-313 (367)
222 2id5_A Lingo-1, leucine rich r 100.0 2.5E-38 8.6E-43 358.2 19.3 327 66-398 7-337 (477)
223 2wtk_C Serine/threonine-protei 100.0 1.6E-37 5.4E-42 330.0 23.9 255 497-769 3-265 (305)
224 4eco_A Uncharacterized protein 100.0 2.2E-38 7.4E-43 370.3 18.8 322 72-402 206-586 (636)
225 3cek_A Dual specificity protei 100.0 9.1E-38 3.1E-42 333.2 22.0 255 497-770 26-295 (313)
226 2wei_A Calmodulin-domain prote 100.0 8.7E-38 3E-42 329.0 21.4 256 496-769 19-278 (287)
227 4e7w_A Glycogen synthase kinas 100.0 4.7E-38 1.6E-42 346.0 19.8 256 498-769 39-323 (394)
228 1zy4_A Serine/threonine-protei 100.0 1.2E-37 4E-42 330.5 22.1 251 497-769 4-285 (303)
229 3nsz_A CK II alpha, casein kin 100.0 7.2E-38 2.5E-42 336.7 20.6 252 498-769 35-321 (330)
230 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-38 1.2E-42 341.8 18.1 258 498-769 30-324 (348)
231 3kvw_A DYRK2, dual specificity 100.0 9.1E-38 3.1E-42 347.4 21.9 197 498-706 96-301 (429)
232 2vwi_A Serine/threonine-protei 100.0 2.8E-38 9.6E-43 335.4 16.2 259 497-768 13-288 (303)
233 3qyz_A Mitogen-activated prote 100.0 1.5E-37 5E-42 338.9 22.0 258 498-770 26-316 (364)
234 3eb0_A Putative uncharacterize 100.0 1.1E-37 3.8E-42 342.2 21.0 257 495-768 3-322 (383)
235 3v47_A TOLL-like receptor 5B a 100.0 6.1E-38 2.1E-42 352.9 19.3 308 71-378 53-413 (455)
236 1blx_A Cyclin-dependent kinase 100.0 1.3E-37 4.3E-42 334.1 20.9 260 497-768 9-297 (326)
237 3e3p_A Protein kinase, putativ 100.0 1.1E-37 3.7E-42 339.6 20.2 264 492-769 16-316 (360)
238 4exu_A Mitogen-activated prote 100.0 1.5E-37 5.3E-42 339.4 21.1 259 498-769 41-325 (371)
239 1wak_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 344.2 20.0 260 498-768 36-392 (397)
240 3rgf_A Cyclin-dependent kinase 100.0 2.5E-38 8.5E-43 350.1 14.7 263 499-770 20-336 (405)
241 3an0_A Dual specificity mitoge 100.0 1.4E-37 4.7E-42 335.9 20.0 257 497-769 49-312 (340)
242 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-37 7.3E-42 336.3 21.6 262 498-769 10-307 (353)
243 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-37 1.3E-41 372.0 25.9 311 92-402 43-525 (844)
244 2i6l_A Mitogen-activated prote 100.0 1.8E-37 6.3E-42 331.8 19.9 253 498-769 10-307 (320)
245 1j1b_A Glycogen synthase kinas 100.0 1.6E-37 5.4E-42 344.6 19.9 254 499-769 54-338 (420)
246 3oja_B Anopheles plasmodium-re 100.0 2.6E-37 9E-42 359.1 22.5 330 73-418 52-384 (597)
247 1z57_A Dual specificity protei 100.0 4.1E-37 1.4E-41 331.8 21.7 253 498-768 13-329 (339)
248 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.1E-38 2.1E-42 335.5 14.9 261 496-776 30-304 (319)
249 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.5E-37 3.2E-41 352.4 25.8 342 62-415 42-511 (562)
250 3coi_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 334.4 20.3 259 498-769 23-307 (353)
251 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-36 4.5E-41 354.9 26.0 324 72-398 56-562 (606)
252 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-36 3.5E-41 352.1 24.4 315 71-398 75-514 (562)
253 3fhr_A MAP kinase-activated pr 100.0 4.2E-37 1.4E-41 331.2 19.7 256 497-770 26-290 (336)
254 2rio_A Serine/threonine-protei 100.0 5.1E-37 1.8E-41 342.0 20.9 253 499-769 15-297 (434)
255 2z7x_B TOLL-like receptor 1, v 100.0 6.5E-37 2.2E-41 350.6 22.1 326 62-399 11-461 (520)
256 2vx3_A Dual specificity tyrosi 100.0 1.1E-36 3.8E-41 334.1 22.8 200 497-706 52-260 (382)
257 2j0j_A Focal adhesion kinase 1 100.0 7.8E-37 2.7E-41 356.4 22.5 256 497-772 388-649 (656)
258 3p23_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 340.6 19.4 249 498-768 23-284 (432)
259 3o6n_A APL1; leucine-rich repe 100.0 1E-36 3.5E-41 335.6 20.7 329 73-417 46-377 (390)
260 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-36 5.4E-41 347.4 23.0 325 61-398 31-485 (520)
261 1ziw_A TOLL-like receptor 3; i 100.0 3.8E-36 1.3E-40 355.9 27.0 331 72-403 25-403 (680)
262 3aln_A Dual specificity mitoge 100.0 5E-37 1.7E-41 329.7 17.1 259 498-769 21-287 (327)
263 1q8y_A SR protein kinase; tran 100.0 9.6E-37 3.3E-41 333.8 19.6 261 498-769 18-335 (373)
264 2z63_A TOLL-like receptor 4, v 100.0 2.1E-36 7.3E-41 350.5 23.6 330 72-403 28-516 (570)
265 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4E-41 325.3 19.7 255 498-769 24-285 (318)
266 3t6q_A CD180 antigen; protein- 100.0 5.1E-36 1.7E-40 350.0 26.4 322 72-395 57-463 (606)
267 2iwi_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 324.8 18.7 250 494-770 26-286 (312)
268 3a99_A Proto-oncogene serine/t 100.0 3.6E-37 1.2E-41 329.6 15.0 247 497-770 41-296 (320)
269 2eu9_A Dual specificity protei 100.0 2.6E-36 9E-41 327.8 21.2 254 498-768 18-334 (355)
270 4ecn_A Leucine-rich repeat pro 100.0 1.7E-36 5.9E-41 360.1 19.6 322 72-402 448-826 (876)
271 2z63_A TOLL-like receptor 4, v 100.0 2.5E-36 8.6E-41 349.9 19.9 326 72-399 52-536 (570)
272 3qa8_A MGC80376 protein; kinas 100.0 8E-37 2.7E-41 349.4 11.7 263 498-766 13-296 (676)
273 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-36 5.4E-41 323.1 13.1 250 97-371 50-302 (313)
274 3uqc_A Probable conserved tran 100.0 1E-35 3.4E-40 312.5 18.0 235 498-774 30-265 (286)
275 1ziw_A TOLL-like receptor 3; i 100.0 1E-34 3.6E-39 343.5 26.4 342 74-416 250-624 (680)
276 4g8a_A TOLL-like receptor 4; l 100.0 1.9E-34 6.6E-39 338.4 26.4 343 72-415 52-581 (635)
277 2z81_A CD282 antigen, TOLL-lik 100.0 4E-35 1.4E-39 338.2 19.0 180 67-253 3-184 (549)
278 3m2w_A MAP kinase-activated pr 100.0 1.9E-34 6.4E-39 305.4 22.2 234 498-770 16-259 (299)
279 2pzi_A Probable serine/threoni 100.0 4.7E-35 1.6E-39 344.9 19.0 238 498-770 79-324 (681)
280 3dzo_A Rhoptry kinase domain; 100.0 4.6E-35 1.6E-39 324.1 14.3 246 498-768 77-364 (413)
281 4g8a_A TOLL-like receptor 4; l 100.0 7.7E-34 2.6E-38 333.3 25.1 323 72-395 76-581 (635)
282 4fmz_A Internalin; leucine ric 100.0 1.2E-33 4.3E-38 305.8 23.7 301 72-394 44-346 (347)
283 1xku_A Decorin; proteoglycan, 100.0 2.2E-33 7.6E-38 301.5 24.4 268 97-371 52-330 (330)
284 1o6v_A Internalin A; bacterial 100.0 1.2E-33 3.9E-38 318.7 23.2 301 72-398 68-370 (466)
285 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-33 6.6E-38 302.3 23.6 267 97-371 54-331 (332)
286 2vuw_A Serine/threonine-protei 100.0 4.4E-35 1.5E-39 315.7 9.4 245 498-768 19-332 (336)
287 3o6n_A APL1; leucine-rich repe 100.0 1.2E-33 4.2E-38 311.0 20.3 289 95-397 43-334 (390)
288 1xku_A Decorin; proteoglycan, 100.0 7.3E-33 2.5E-37 297.5 25.0 284 99-392 33-330 (330)
289 3oja_B Anopheles plasmodium-re 100.0 1.4E-33 4.9E-38 327.6 20.7 307 95-415 49-359 (597)
290 2ft3_A Biglycan; proteoglycan, 100.0 4.5E-33 1.5E-37 299.4 23.1 284 98-392 34-331 (332)
291 1o6v_A Internalin A; bacterial 100.0 4.7E-33 1.6E-37 313.7 24.2 300 72-396 46-346 (466)
292 3bz5_A Internalin-J, INLJ; leu 100.0 8.6E-33 2.9E-37 309.3 24.2 303 71-402 63-395 (457)
293 4fcg_A Uncharacterized protein 100.0 7.3E-34 2.5E-38 304.3 14.4 277 27-350 26-314 (328)
294 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-32 3.8E-37 308.4 23.6 296 71-395 41-353 (457)
295 4fmz_A Internalin; leucine ric 100.0 3E-32 1E-36 294.9 22.1 282 71-373 65-346 (347)
296 2z80_A TOLL-like receptor 2, v 100.0 5.2E-33 1.8E-37 301.6 14.5 286 57-377 26-318 (353)
297 2z66_A Variable lymphocyte rec 100.0 5.9E-32 2E-36 287.2 17.0 231 121-352 28-263 (306)
298 1jl5_A Outer protein YOPM; leu 100.0 1E-31 3.4E-36 300.4 17.5 295 72-399 11-354 (454)
299 2z66_A Variable lymphocyte rec 100.0 8.7E-33 3E-37 293.6 8.5 252 61-328 7-263 (306)
300 1jl5_A Outer protein YOPM; leu 100.0 1.7E-30 5.7E-35 290.5 27.2 280 72-395 91-371 (454)
301 2z80_A TOLL-like receptor 2, v 100.0 1.2E-31 4E-36 290.9 13.8 270 101-398 35-318 (353)
302 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-31 9.3E-36 279.0 14.6 268 100-394 14-282 (285)
303 1ozn_A Reticulon 4 receptor; N 100.0 8.8E-31 3E-35 275.1 16.7 255 75-334 14-269 (285)
304 3zyi_A Leucine-rich repeat-con 100.0 2.1E-30 7E-35 290.9 19.0 230 97-351 75-304 (452)
305 4fcg_A Uncharacterized protein 100.0 2.4E-30 8E-35 277.1 17.9 235 119-373 79-314 (328)
306 3zyj_A Leucine-rich repeat-con 100.0 4.7E-30 1.6E-34 286.9 21.1 227 122-350 65-292 (440)
307 3zyi_A Leucine-rich repeat-con 100.0 4.1E-30 1.4E-34 288.4 20.6 231 121-377 75-307 (452)
308 3zyj_A Leucine-rich repeat-con 100.0 3.7E-30 1.3E-34 287.7 18.8 245 76-326 47-292 (440)
309 1wwl_A Monocyte differentiatio 100.0 5.4E-32 1.9E-36 288.1 -0.2 203 167-374 93-310 (312)
310 1wwl_A Monocyte differentiatio 100.0 1.2E-31 4.2E-36 285.3 1.7 248 94-351 40-310 (312)
311 2o6q_A Variable lymphocyte rec 100.0 7.8E-29 2.7E-33 257.9 20.6 218 58-279 2-219 (270)
312 3g06_A SSPH2 (leucine-rich rep 100.0 2.2E-29 7.6E-34 289.8 17.5 284 56-384 17-308 (622)
313 3o53_A Protein LRIM1, AGAP0063 100.0 4.5E-31 1.5E-35 281.6 -0.2 262 99-374 12-277 (317)
314 3o53_A Protein LRIM1, AGAP0063 100.0 9.3E-31 3.2E-35 279.2 0.6 270 73-357 11-283 (317)
315 4azs_A Methyltransferase WBDD; 100.0 9.5E-30 3.3E-34 291.1 7.7 188 507-704 242-438 (569)
316 1z7x_W Ribonuclease inhibitor; 100.0 8.2E-32 2.8E-36 303.4 -11.1 322 73-395 29-412 (461)
317 3oja_A Leucine-rich immune mol 100.0 1.3E-29 4.4E-34 286.1 5.2 233 122-368 35-270 (487)
318 1z7x_W Ribonuclease inhibitor; 99.9 5E-31 1.7E-35 297.0 -9.0 323 72-394 56-440 (461)
319 3oja_A Leucine-rich immune mol 99.9 2.5E-29 8.5E-34 283.8 4.6 238 94-345 31-270 (487)
320 3g06_A SSPH2 (leucine-rich rep 99.9 5.3E-27 1.8E-31 270.0 23.2 263 97-402 40-305 (622)
321 2z62_A TOLL-like receptor 4, v 99.9 6.2E-27 2.1E-31 244.5 17.8 206 146-352 29-239 (276)
322 2z62_A TOLL-like receptor 4, v 99.9 4.4E-27 1.5E-31 245.6 15.7 206 97-303 28-238 (276)
323 3rfs_A Internalin B, repeat mo 99.9 2.9E-27 1E-31 246.2 11.3 227 98-337 20-246 (272)
324 3rfs_A Internalin B, repeat mo 99.9 2.4E-26 8.4E-31 239.3 15.2 212 93-315 37-248 (272)
325 2o6q_A Variable lymphocyte rec 99.9 1.6E-25 5.4E-30 232.9 20.3 204 97-303 16-219 (270)
326 4glp_A Monocyte differentiatio 99.9 3E-26 1E-30 243.5 14.8 223 98-350 65-307 (310)
327 3m19_A Variable lymphocyte rec 99.9 2.1E-25 7.1E-30 229.3 17.0 191 59-255 3-193 (251)
328 3goz_A Leucine-rich repeat-con 99.9 1.6E-27 5.6E-32 259.1 0.4 254 101-354 2-301 (362)
329 2ast_B S-phase kinase-associat 99.9 2.6E-27 9E-32 254.8 0.1 265 60-334 36-314 (336)
330 1p9a_G Platelet glycoprotein I 99.9 4.7E-25 1.6E-29 231.4 16.1 203 93-302 6-208 (290)
331 1p9a_G Platelet glycoprotein I 99.9 6E-25 2.1E-29 230.6 15.9 203 117-350 6-208 (290)
332 2xwt_C Thyrotropin receptor; s 99.9 4.2E-25 1.5E-29 225.3 13.6 197 97-299 31-236 (239)
333 3en9_A Glycoprotease, O-sialog 99.9 1.1E-25 3.8E-30 256.0 7.2 187 502-705 339-539 (540)
334 2xwt_C Thyrotropin receptor; s 99.9 1.1E-24 3.7E-29 222.2 13.4 131 122-254 32-169 (239)
335 3goz_A Leucine-rich repeat-con 99.9 2.1E-26 7.1E-31 250.3 -0.2 253 125-377 2-301 (362)
336 2ca6_A RAN GTPase-activating p 99.9 5.8E-27 2E-31 257.2 -4.8 190 113-302 24-257 (386)
337 4glp_A Monocyte differentiatio 99.9 1.2E-24 4E-29 231.2 12.8 204 95-303 89-308 (310)
338 2ast_B S-phase kinase-associat 99.9 3.1E-26 1.1E-30 246.5 0.2 255 98-382 48-315 (336)
339 2ca6_A RAN GTPase-activating p 99.9 2.8E-26 9.5E-31 251.8 -2.4 235 93-327 28-317 (386)
340 1h6u_A Internalin H; cell adhe 99.9 5.2E-24 1.8E-28 225.7 15.1 194 94-303 38-231 (308)
341 2o6s_A Variable lymphocyte rec 99.9 1.1E-23 3.7E-28 209.9 16.0 183 60-264 6-188 (208)
342 3m19_A Variable lymphocyte rec 99.9 2.2E-23 7.5E-28 214.2 18.2 180 98-280 15-194 (251)
343 1h6u_A Internalin H; cell adhe 99.9 6.3E-24 2.2E-28 225.0 14.6 207 102-326 24-230 (308)
344 4ay9_X Follicle-stimulating ho 99.9 1.8E-23 6.1E-28 226.0 16.1 222 97-323 30-256 (350)
345 4ay9_X Follicle-stimulating ho 99.9 2.8E-23 9.6E-28 224.4 16.0 223 121-348 30-257 (350)
346 3cvr_A Invasion plasmid antige 99.9 3.7E-23 1.3E-27 235.1 12.8 203 57-289 39-254 (571)
347 2o6s_A Variable lymphocyte rec 99.9 3.4E-22 1.2E-26 199.1 16.6 180 100-289 10-189 (208)
348 3ogk_B Coronatine-insensitive 99.9 1.9E-24 6.4E-29 251.3 -0.8 300 72-374 164-527 (592)
349 3cvr_A Invasion plasmid antige 99.9 2.5E-22 8.5E-27 228.3 15.5 189 98-314 60-255 (571)
350 3ogk_B Coronatine-insensitive 99.9 4.2E-25 1.4E-29 256.8 -8.6 247 73-321 139-411 (592)
351 1zar_A RIO2 kinase; serine kin 99.9 1.8E-22 6.1E-27 210.4 10.4 157 490-677 81-252 (282)
352 3e6j_A Variable lymphocyte rec 99.8 8.9E-21 3.1E-25 191.6 16.5 160 56-231 14-173 (229)
353 1h6t_A Internalin B; cell adhe 99.8 4.5E-21 1.5E-25 201.2 14.1 172 94-279 43-214 (291)
354 1h6t_A Internalin B; cell adhe 99.8 2.9E-21 1E-25 202.7 11.9 189 99-303 26-214 (291)
355 1m9s_A Internalin B; cell inva 99.8 7E-21 2.4E-25 218.9 15.9 173 94-280 40-212 (605)
356 1m9s_A Internalin B; cell inva 99.8 3.3E-21 1.1E-25 221.6 11.0 198 97-310 21-218 (605)
357 4b8c_D Glucose-repressible alc 99.8 1.2E-21 4.1E-26 231.0 5.6 249 46-327 147-405 (727)
358 2p1m_B Transport inhibitor res 99.8 3.7E-23 1.3E-27 240.5 -8.0 320 72-395 105-495 (594)
359 2xot_A Amphoterin-induced prot 99.8 1.1E-20 3.8E-25 204.9 11.6 152 100-254 21-176 (361)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-20 1.3E-24 185.8 14.0 151 101-254 15-166 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 3.7E-20 1.3E-24 185.7 13.9 134 97-230 32-165 (220)
362 2v9t_B SLIT homolog 2 protein 99.8 3.5E-20 1.2E-24 185.9 13.3 152 100-254 14-165 (220)
363 1dce_A Protein (RAB geranylger 99.8 4.6E-23 1.6E-27 235.7 -9.1 203 142-367 346-567 (567)
364 2xot_A Amphoterin-induced prot 99.8 2.2E-20 7.6E-25 202.5 12.3 175 76-254 22-202 (361)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-20 1.4E-24 185.4 13.3 153 76-232 15-168 (220)
366 1dce_A Protein (RAB geranylger 99.8 1.4E-22 4.9E-27 231.6 -6.3 204 118-344 346-567 (567)
367 1xeu_A Internalin C; cellular 99.8 2.4E-20 8.2E-25 192.6 9.8 171 95-280 17-187 (263)
368 3e6j_A Variable lymphocyte rec 99.8 2.6E-19 8.9E-24 180.8 15.8 151 100-254 22-172 (229)
369 1xeu_A Internalin C; cellular 99.8 6.8E-21 2.3E-25 196.7 2.5 171 119-304 17-187 (263)
370 4b8c_D Glucose-repressible alc 99.8 2.3E-20 8E-25 220.0 5.4 224 97-351 173-405 (727)
371 2p1m_B Transport inhibitor res 99.8 9.9E-22 3.4E-26 228.4 -6.8 319 72-394 130-519 (594)
372 4ezg_A Putative uncharacterize 99.8 4.8E-19 1.6E-23 174.5 11.8 154 117-278 40-194 (197)
373 4ezg_A Putative uncharacterize 99.8 3.4E-19 1.2E-23 175.5 10.0 155 93-255 40-195 (197)
374 1w8a_A SLIT protein; signaling 99.8 8.4E-19 2.9E-23 171.9 9.7 171 221-394 12-183 (192)
375 1zth_A RIO1 serine protein kin 99.7 5E-18 1.7E-22 174.6 12.4 141 499-654 47-219 (258)
376 1w8a_A SLIT protein; signaling 99.7 5.5E-18 1.9E-22 166.0 10.9 128 100-230 11-139 (192)
377 2ell_A Acidic leucine-rich nuc 99.7 1.3E-17 4.6E-22 159.5 12.5 133 96-230 23-160 (168)
378 3sb4_A Hypothetical leucine ri 99.7 4E-18 1.4E-22 182.3 8.9 236 96-343 48-327 (329)
379 3sb4_A Hypothetical leucine ri 99.7 1.8E-18 6.2E-23 185.0 4.7 258 96-366 24-327 (329)
380 2ell_A Acidic leucine-rich nuc 99.7 1.3E-17 4.4E-22 159.7 10.2 133 120-254 23-160 (168)
381 2je0_A Acidic leucine-rich nuc 99.7 2.1E-17 7.3E-22 154.7 9.9 128 96-225 16-148 (149)
382 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.6E-21 154.7 14.2 135 60-209 6-140 (177)
383 4fdw_A Leucine rich hypothetic 99.7 3.5E-16 1.2E-20 170.9 19.1 267 94-373 110-383 (401)
384 2je0_A Acidic leucine-rich nuc 99.7 2.9E-17 9.8E-22 153.8 7.6 128 120-249 16-148 (149)
385 2wfh_A SLIT homolog 2 protein 99.7 1.5E-16 5.1E-21 155.7 13.0 126 125-254 14-139 (193)
386 4fdw_A Leucine rich hypothetic 99.7 4.7E-16 1.6E-20 169.9 18.2 243 119-373 111-358 (401)
387 2wfh_A SLIT homolog 2 protein 99.7 1.9E-16 6.5E-21 155.0 12.2 109 97-206 31-139 (193)
388 2o6r_A Variable lymphocyte rec 99.7 3.1E-16 1.1E-20 151.4 12.2 126 100-228 10-135 (177)
389 1ds9_A Outer arm dynein; leuci 99.6 3.2E-18 1.1E-22 168.7 -5.3 154 94-254 15-185 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 7.4E-18 2.5E-22 166.1 -6.4 135 117-256 14-155 (198)
391 1a9n_A U2A', U2A'; complex (nu 99.6 9.4E-16 3.2E-20 147.8 8.5 109 93-206 15-126 (176)
392 4gyi_A RIO2 kinase; protein ki 99.6 2.2E-15 7.5E-20 160.6 11.5 149 491-655 87-266 (397)
393 1a9n_A U2A', U2A'; complex (nu 99.6 6.7E-16 2.3E-20 148.9 6.7 133 116-253 14-152 (176)
394 3g39_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 135.1 10.9 104 100-206 12-115 (170)
395 3g39_A Variable lymphocyte rec 99.5 7.7E-14 2.6E-18 133.4 12.4 87 97-183 30-116 (170)
396 2r9u_A Variable lymphocyte rec 99.5 7.1E-14 2.4E-18 134.1 10.8 104 100-206 15-118 (174)
397 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.8E-18 132.0 12.4 105 75-183 15-119 (174)
398 4fs7_A Uncharacterized protein 99.4 1.8E-12 6E-17 142.0 16.5 270 88-368 62-374 (394)
399 3un9_A NLR family member X1; l 99.4 5E-15 1.7E-19 160.2 -5.4 110 193-302 126-252 (372)
400 4fs7_A Uncharacterized protein 99.4 5.9E-12 2E-16 137.8 17.9 264 72-347 71-376 (394)
401 3un9_A NLR family member X1; l 99.4 4.2E-15 1.5E-19 160.7 -7.6 166 121-286 72-260 (372)
402 2ifg_A High affinity nerve gro 99.3 9.7E-13 3.3E-17 141.5 8.2 102 102-206 13-116 (347)
403 2ifg_A High affinity nerve gro 99.3 2E-12 6.8E-17 139.1 9.5 109 61-183 8-117 (347)
404 4gt6_A Cell surface protein; l 99.3 3.8E-11 1.3E-15 131.4 17.0 111 258-372 258-369 (394)
405 4gt6_A Cell surface protein; l 99.2 1E-10 3.5E-15 128.0 17.4 271 88-369 54-343 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 8.3E-11 2.8E-15 121.0 12.9 147 494-652 9-212 (263)
407 2ra8_A Uncharacterized protein 99.1 4.4E-11 1.5E-15 128.1 4.6 140 161-303 164-321 (362)
408 1nd4_A Aminoglycoside 3'-phosp 99.0 3.4E-10 1.1E-14 116.1 9.3 138 499-653 20-214 (264)
409 2ra8_A Uncharacterized protein 99.0 6.3E-11 2.1E-15 126.9 3.3 102 72-177 107-227 (362)
410 3rw6_A Nuclear RNA export fact 99.0 1.6E-12 5.6E-17 132.0 -9.7 23 59-81 76-99 (267)
411 4h09_A Hypothetical leucine ri 98.9 2.3E-08 7.7E-13 108.6 16.9 284 73-370 47-343 (379)
412 3dxp_A Putative acyl-COA dehyd 98.9 4E-09 1.4E-13 113.7 10.7 143 503-653 42-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2.9E-09 9.9E-14 111.9 6.5 185 504-705 25-288 (304)
414 4h09_A Hypothetical leucine ri 98.8 5.4E-08 1.8E-12 105.6 16.4 272 93-378 42-326 (379)
415 3rw6_A Nuclear RNA export fact 98.6 3E-09 1E-13 107.9 -2.3 79 143-223 168-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 1E-08 3.5E-13 99.0 0.0 91 116-206 31-136 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.3E-08 4.6E-13 98.1 0.2 119 140-278 31-164 (185)
418 3r70_A Aminoglycoside phosphot 98.5 7.6E-07 2.6E-11 94.0 13.0 137 500-654 38-238 (320)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 4.4E-06 1.5E-10 85.7 13.5 135 506-653 31-223 (272)
420 3d1u_A Putative fructosamine-3 98.2 7.1E-06 2.4E-10 84.8 12.8 142 502-652 18-215 (288)
421 3tdw_A Gentamicin resistance p 98.2 1E-05 3.5E-10 84.6 13.5 136 504-653 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 2.4E-05 8.2E-10 83.8 12.9 145 501-654 43-244 (362)
423 3e4g_A ATP synthase subunit S, 97.9 2.1E-06 7.3E-11 80.6 1.9 83 122-204 62-150 (176)
424 3ats_A Putative uncharacterize 97.9 1.3E-05 4.5E-10 85.8 7.2 83 504-586 25-121 (357)
425 3e4g_A ATP synthase subunit S, 97.9 3.9E-06 1.3E-10 78.8 2.1 83 145-227 61-149 (176)
426 2q83_A YTAA protein; 2635576, 97.7 0.00012 4.2E-09 77.6 10.6 140 505-652 38-251 (346)
427 2olc_A MTR kinase, methylthior 97.6 0.00014 4.7E-09 79.1 10.5 78 504-583 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.5 0.00046 1.6E-08 71.8 11.4 138 504-649 41-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.4 3.2E-05 1.1E-09 74.0 1.6 12 119-130 39-50 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.4 2.3E-05 7.9E-10 75.0 0.0 65 94-158 38-111 (197)
431 3f7w_A Putative fructosamine-3 97.4 0.00083 2.8E-08 69.3 11.7 79 499-584 15-96 (288)
432 2pyw_A Uncharacterized protein 97.3 0.0016 5.6E-08 71.1 12.8 78 622-701 231-313 (420)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.0024 8.2E-08 66.9 10.9 158 489-652 7-216 (322)
434 1zyl_A Hypothetical protein YI 97.0 0.0081 2.8E-07 62.9 14.3 158 489-653 11-223 (328)
435 3csv_A Aminoglycoside phosphot 96.9 0.0029 9.8E-08 66.7 10.4 141 505-653 24-217 (333)
436 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.1E-08 57.3 6.4 34 123-156 33-66 (130)
437 1nw1_A Choline kinase (49.2 KD 96.7 0.0023 7.8E-08 70.0 7.8 73 504-585 78-159 (429)
438 3dxq_A Choline/ethanolamine ki 96.7 0.0032 1.1E-07 65.3 8.4 138 504-653 23-202 (301)
439 3rfe_A Platelet glycoprotein I 96.6 0.003 1E-07 56.2 6.6 37 146-182 32-68 (130)
440 3feg_A Choline/ethanolamine ki 96.6 0.0042 1.4E-07 66.4 8.8 141 505-653 56-254 (379)
441 2yle_A Protein spire homolog 1 96.2 0.034 1.2E-06 53.3 11.3 102 584-703 34-135 (229)
442 2qg7_A Ethanolamine kinase PV0 96.1 0.014 4.8E-07 64.0 9.7 74 504-585 113-188 (458)
443 3c5i_A Choline kinase; choline 96.1 0.0061 2.1E-07 65.2 6.3 74 504-585 38-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.1 0.01 3.5E-07 62.5 7.8 31 623-653 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.2 0.044 1.5E-06 58.7 8.7 145 504-652 57-279 (401)
446 3mes_A Choline kinase; malaria 93.0 0.38 1.3E-05 51.9 10.4 74 504-585 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.3 0.54 1.9E-05 50.4 8.1 30 624-653 245-280 (401)
448 4ann_A ESSB; membrane protein, 89.4 1.1 3.9E-05 42.8 8.5 116 556-706 43-159 (215)
449 4ano_A ESSB; membrane protein, 85.8 2.4 8.2E-05 40.7 8.4 115 556-705 48-163 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 72.3 0.42 1.4E-05 52.4 -2.1 61 504-568 147-214 (463)
451 2l2t_A Receptor tyrosine-prote 59.6 3.7 0.00013 28.0 1.4 6 460-465 33-38 (44)
452 2lz0_A Uncharacterized protein 55.1 23 0.00079 29.1 6.0 16 186-201 13-28 (100)
453 2lz0_A Uncharacterized protein 51.4 30 0.001 28.4 6.1 46 108-154 7-52 (100)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=431.23 Aligned_cols=260 Identities=25% Similarity=0.410 Sum_probs=205.7
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+++.+.+.||+|+||+||+|+++ ..||||+++...... ...+.|.+|++++++++|||||++++++.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~-~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP-EQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 467888999999999999999875 369999997654433 335789999999999999999999999864 5689999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||++|+|.++++... ..+++..+..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997643 3489999999999999999999999 9999999999999999999999999999876533
Q ss_pred C--CCccccccccCccCcccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC-CC
Q 003780 658 S--SNRTIVAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL-SP 731 (796)
Q Consensus 658 ~--~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 731 (796)
. ......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||..... ...+...+.... .+
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--------~~~~~~~~~~~~~~p 257 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQIIFMVGRGYASP 257 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHHHHHHHTTCCCC
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcCCCCC
Confidence 2 22344679999999999863 4689999999999999999999999974221 112222222222 22
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
............+.+++.+||+.||++||||+||+++|+..+-
T Consensus 258 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 2222222233458899999999999999999999999987653
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.4e-52 Score=439.89 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=207.9
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||+||+|+. .+|+.||||++........ ..+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHH-HHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 36899999999999999999975 4799999999987655433 356899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... ...+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999997643 23478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||... .....+..+......+....
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~--------~~~~~~~~i~~~~~~~~~~~- 248 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--------SMKNLVLKIISGSFPPVSLH- 248 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHTCCCCCCTT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHcCCCCCCCcc-
Confidence 322334567999999999999999999999999999999999999999732 12233334444433322211
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
....+.+++.+||+.||++|||++|+++|
T Consensus 249 ---~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 249 ---YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12347899999999999999999999987
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-51 Score=433.06 Aligned_cols=257 Identities=23% Similarity=0.358 Sum_probs=210.4
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
+++++.+.||+|+||+||+|++. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 45677899999999999999752 5789999999765433 224689999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
.++|||||++|+|.++++.... ...++|..+.+|+.|||+||+|||++ +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 9999999999999999975421 24589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.+||+|||+|+....... ......||+.|||||++.++.|+.++|||||||++|||+| |+.||....
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-------- 252 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------- 252 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--------
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--------
Confidence 99999999999987643322 2344679999999999999999999999999999999998 899987422
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
...... .+......+... .....+.+++.+||+.||++||||+||+++|+..
T Consensus 253 ~~~~~~-~i~~~~~~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 253 NQDVVE-MIRNRQVLPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHH-HHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHH-HHHcCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 122222 222222222221 2234578999999999999999999999999864
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-51 Score=432.35 Aligned_cols=258 Identities=26% Similarity=0.429 Sum_probs=210.8
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
++|.+.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH---HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh---HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888999999999999999753 478899999976533 235689999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcC----------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY----------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
.++|||||++|+|.+++++.. ....++|..+.+|+.|||+||+|||++ +||||||||+|||++.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999998643 234689999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhh
Q 003780 643 AFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (796)
+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ...
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~ 238 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNE 238 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHH
Confidence 999999999876543222 223468999999999999999999999999999999999 899987422 122
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
....+...... +.+. .....+.+++.+||+.||++||||+||.+.|+....
T Consensus 239 ~~~~i~~~~~~-~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 239 VIECITQGRVL-QRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHHHHHTCCC-CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-CCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22233322221 1111 122347899999999999999999999999987643
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.7e-51 Score=434.04 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=205.5
Q ss_pred cCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
++|.+.+.||+|+||+||+|+++ +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH---HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 46778899999999999999754 478999999976532 235689999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCc------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYE------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK 640 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 640 (796)
.++|||||++|+|.+++++... ...++|.++++|+.|||+||+|||++ +||||||||+|||++.+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999986532 24589999999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchh
Q 003780 641 LEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~ 717 (796)
+.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.... .
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~ 266 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------N 266 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------H
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------H
Confidence 9999999999987654322 2234579999999999999999999999999999999999 899987422 1
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
......+... ...+... .....+.+++.+||+.||++||||+||+++|+.+..
T Consensus 267 ~~~~~~i~~g-~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 267 TEAIDCITQG-RELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHHHHHT-CCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 2222222222 2222211 122347899999999999999999999999988654
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.3e-51 Score=434.19 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=211.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|++.+.||+|+||+||+|+.+ +|+.||||++....... .+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999754 79999999997654433 346889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+. .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999999753 389999999999999999999999 9999999999999999999999999999987665
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.. ...+.... .
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~-~~~~~~~~-~ 293 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRD-NLPPRLKN-L 293 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHH-SSCCCCSC-G
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHc-CCCCCCCc-c
Confidence 555566789999999999999999999999999999999999999997321 1112222222 22211111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.+++.+||+.||++|||++|+++|-
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp 325 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 325 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 12234578999999999999999999999873
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-51 Score=428.05 Aligned_cols=264 Identities=23% Similarity=0.344 Sum_probs=218.2
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.........+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999975 579999999998765444444578999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999998654 489999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||... ........+.......+ .
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~~~~~p--~ 255 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--------NEGLIFAKIIKLEYDFP--E 255 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCCCC--T
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCCCCCC--c
Confidence 32 234568999999999999999999999999999999999999999732 12233333443333221 1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HhhcCccccCccc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE--FLTCKIALVNPFE 781 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~~~~~~~ 781 (796)
.....+.+++.+||+.||++|||++|++.+ +.++.++..-.|.
T Consensus 256 ---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~ 300 (311)
T 4aw0_A 256 ---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300 (311)
T ss_dssp ---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred ---ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHH
Confidence 112347789999999999999999997543 5555544433333
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-50 Score=413.74 Aligned_cols=250 Identities=23% Similarity=0.369 Sum_probs=193.9
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999975 479999999998766555444568999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+ +|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 689999997653 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. .....+||+.|+|||++.+..+ +.++||||+||++|||+||+.||.... .......+.......+ ..
T Consensus 166 ~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------~~~~~~~i~~~~~~~p--~~ 234 (275)
T 3hyh_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGVYTLP--KF 234 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCC--TT
T ss_pred C-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCC--CC
Confidence 2 2344679999999999998876 579999999999999999999997321 1222333333322211 11
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....+.+++.+||+.||++|||++|+++|-
T Consensus 235 ---~s~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 123477899999999999999999999873
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8e-50 Score=415.49 Aligned_cols=248 Identities=26% Similarity=0.413 Sum_probs=200.6
Q ss_pred ccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----cceeeEE
Q 003780 502 DIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----KKCMFLI 576 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lV 576 (796)
.+.+.||+|+||+||+|.. .+++.||+|++........ ..+.|.+|++++++++|||||++++++.. ++..++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH-HHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHH-HHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 5677899999999999975 4689999999986654433 35689999999999999999999999875 3568999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~ 655 (796)
||||++|+|.+++++.. .+++..+..++.||++||+|||++ .++|+||||||+|||++. ++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999998653 489999999999999999999998 113999999999999985 7899999999998643
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC-ccc
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP-PVD 734 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 734 (796)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ....+...+.....+ ...
T Consensus 184 ~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~--------~~~~~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 184 A--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ--------NAAQIYRRVTSGVKPASFD 252 (290)
T ss_dssp T--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS--------SHHHHHHHHTTTCCCGGGG
T ss_pred C--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------cHHHHHHHHHcCCCCCCCC
Confidence 2 23445689999999998865 69999999999999999999999996321 112222333332222 121
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
. .....+.+++.+||+.||++|||++|+++|
T Consensus 253 ~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 K---VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp G---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c---cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 122347899999999999999999999986
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.8e-50 Score=435.09 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=210.8
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|++.+.||+|+||.||+|+. .+|+.||||++....... .+.+.+|+.+|++++|||||++++++.+++..|+||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 5699999999999999999975 479999999997654433 346889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
|||++|+|.++++.. .+++..+..++.||++||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 999999999999754 389999999999999999999999 9999999999999999999999999999987665
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...+..+.. ...+.... .
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~-~~~~~~~~-~ 370 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRD-NLPPRLKN-L 370 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHH-SCCCCCSC-T
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHc-CCCCCCcc-c
Confidence 5555667899999999999999999999999999999999999999973221 112222222 21111111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.+++.+||+.||++|||++|+++|-
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp 402 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 402 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 11223478999999999999999999999973
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.9e-50 Score=424.01 Aligned_cols=250 Identities=21% Similarity=0.264 Sum_probs=203.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.+.|++.+.||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35688889999999999999975 4699999999975432 24699999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 655 (796)
|||+++|+|.+++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+.+.
T Consensus 129 mEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999998653 489999999999999999999999 999999999999999987 69999999999775
Q ss_pred CCCCC-----ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 656 SDSSN-----RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 656 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
.+... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+......
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~~ 274 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--------PLCLKIASEPPP 274 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--------CCHHHHHHSCCG
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHcCCCC
Confidence 43221 22357999999999999999999999999999999999999999743221 111122221111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....+......+.+++.+||+.||++|||++|+++++..
T Consensus 275 --~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 --IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp --GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 111111223357789999999999999999999998864
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.1e-50 Score=419.56 Aligned_cols=244 Identities=24% Similarity=0.326 Sum_probs=197.2
Q ss_pred cCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||+||+|+.. .++.||||++......... ...+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 57999999999999999999642 4789999999865543222 246888999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999998654 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
..........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+.......+
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~~~~p-- 246 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAKLGMP-- 246 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC--
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCCCCCC--
Confidence 554444556789999999999999999999999999999999999999997321 2223333333333221
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTM 762 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 762 (796)
. .....+.+++.+||+.||++|||+
T Consensus 247 ~---~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 247 Q---FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C---cCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 112347799999999999999985
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4e-49 Score=416.42 Aligned_cols=266 Identities=23% Similarity=0.339 Sum_probs=205.1
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----eee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----CMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~ 574 (796)
++|.+.+.||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++++|.+++ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~----~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh----hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4678889999999999999987 5899999999754321 123345666677899999999999998764 579
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc-----CCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD-----CMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
+||||+++|+|.+++++. .++|..+.+++.|+|+||+|||++ +.++|+||||||+|||++.++++||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999864 389999999999999999999976 24589999999999999999999999999
Q ss_pred cccccCCCCCC----ccccccccCccCccccccC------CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC------
Q 003780 650 TARLLDSDSSN----RTIVAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP------ 713 (796)
Q Consensus 650 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~------ 713 (796)
+|+........ ....+||+.|+|||++.+. .++.++|||||||++|||+||+.||........+
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99876543322 2235799999999998754 4678999999999999999998887543221111
Q ss_pred -CchhhhHHHHhhcCCCCCccchh--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 714 -SSDQKIMLIDVLDSRLSPPVDRM--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 714 -~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..........+.....++..... ..+....+.+++.+||+.||++||||+||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 11112223334444444433221 2234456889999999999999999999999998764
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-49 Score=426.94 Aligned_cols=265 Identities=25% Similarity=0.359 Sum_probs=214.5
Q ss_pred HHHHHHhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC-CceeeEE
Q 003780 492 EDIIKATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-RNIVKLY 564 (796)
Q Consensus 492 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~ 564 (796)
.+++...++|++.+.||+|+||+||+|.+. .++.||||++....... ..+.|.+|++++.+++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~--~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH--HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH--HHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 445556789999999999999999999753 24689999998665433 24689999999999965 8999999
Q ss_pred eEEEec-ceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 003780 565 GFCLHK-KCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDI 630 (796)
Q Consensus 565 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl 630 (796)
|+|.++ +..++|||||++|+|.+++++... ...+++..+..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 568999999999999999986432 24589999999999999999999999 9999999
Q ss_pred CCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccc
Q 003780 631 SSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELL 707 (796)
Q Consensus 631 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~ 707 (796)
||+|||+++++.+||+|||+|+.+..+... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999976544332 234578999999999999999999999999999999998 89998743
Q ss_pred ccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 708 SSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.. ...+...+............ ..++.+++.+||+.||++||||+||+++|+..
T Consensus 292 ~~--------~~~~~~~i~~g~~~~~p~~~---~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 292 KI--------DEEFCRRLKEGTRMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CC--------SHHHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CH--------HHHHHHHHHcCCCCCCCccC---CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 21 11222222222222222212 23478899999999999999999999999765
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.3e-48 Score=407.24 Aligned_cols=251 Identities=24% Similarity=0.408 Sum_probs=194.7
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc------
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK------ 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 571 (796)
++|++.+.||+|+||+||+|+. .+|+.||||++...... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 4699999999999999999975 47999999999765432 23467899999999999999999999987654
Q ss_pred ------eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEE
Q 003780 572 ------CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFV 645 (796)
Q Consensus 572 ------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 645 (796)
..|+||||+++|+|.+++.........++..+..++.||++||+|||++ +|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999998765555567788899999999999999999 9999999999999999999999
Q ss_pred eeeccccccCCCCCC------------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC
Q 003780 646 ADFGTARLLDSDSSN------------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP 713 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~ 713 (796)
+|||+|+.+...... .+..+||+.|||||++.+..|+.++||||+||++|||++ ||...
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~------ 230 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ------ 230 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH------
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc------
Confidence 999999876543221 123579999999999999999999999999999999996 76521
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...............++ ..........+++.+||+.||++|||+.|+++|
T Consensus 231 -~~~~~~~~~~~~~~~p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 231 -MERVRTLTDVRNLKFPP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHHHHHHHTTCCCH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -cHHHHHHHHHhcCCCCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11112222222222221 122233346789999999999999999999986
No 16
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-46 Score=449.86 Aligned_cols=353 Identities=38% Similarity=0.575 Sum_probs=296.0
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCC-CCcEeecccCcCCCCCCCCCCC--CCCCCE
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALS-KLRYLDFSFNNLTGSIPPELGS--LRNLEV 149 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~--l~~L~~ 149 (796)
+++.|+++++.+.|.++...|..+++|++|+|++|.+.+.+|..+.+++ +|++|+|++|.+++.+|..+.. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 3455555555555555544456666666666666666666666666655 6666666666666666666655 677888
Q ss_pred EEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccc
Q 003780 150 LNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKL 229 (796)
Q Consensus 150 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 229 (796)
|+|++|++++.+|..++++++|+.|+|++|++++.+|..|+++++|++|+|++|++++.+|..+..+++|++|++++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 88888888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccc
Q 003780 230 MGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITI 309 (796)
Q Consensus 230 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~ 309 (796)
++.+|..+.++++|++|+|++|++++.+|.+++++++|+.|+|++|++++.+|..+.++++|++|++++|+++|.+|..+
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988777543
Q ss_pred ----------------------------------------------------------------------ccccccceec
Q 003780 310 ----------------------------------------------------------------------AGLISLKGLD 319 (796)
Q Consensus 310 ----------------------------------------------------------------------~~l~~L~~L~ 319 (796)
..+++|++||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 3357799999
Q ss_pred ccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc-ccccceEEecccccCCCCCccccc---cccccccCCCCcc
Q 003780 320 LSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKLNGTIPPFLYH---RFPLDLSYNDLEG 395 (796)
Q Consensus 320 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~l~~N~l~~~~p~~~~~---~~~l~l~~N~l~~ 395 (796)
|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++ +++|+.|||++|+++|.+|..+.. +..||+++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 999999999999999999999999999999999999885 899999999999999999987655 5589999999999
Q ss_pred cCCCCCC--CC-CccccCCccccccC--CCCCCCC
Q 003780 396 EIPDYFR--DS-PFKVYGNQGICYFS--ACSTLHT 425 (796)
Q Consensus 396 ~~p~~~~--~~-~~~~~~n~~~c~~~--~~~~~~~ 425 (796)
.+|+... .. +..+.||+++||.+ .|....+
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~~ 753 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNA 753 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC-
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCCcCCCCCcc
Confidence 9998532 22 23457999999986 6765433
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.6e-46 Score=436.12 Aligned_cols=340 Identities=22% Similarity=0.257 Sum_probs=302.4
Q ss_pred CCCCCCccC---CceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCc-----------------------
Q 003780 55 SNSSDHCKL---DGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNY----------------------- 108 (796)
Q Consensus 55 ~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~----------------------- 108 (796)
..+++||.| .||+|+..++|+.|+|+++++.|.+++ .|+.|++|++|+|++|.
T Consensus 61 ~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~ 139 (636)
T 4eco_A 61 NFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQ 139 (636)
T ss_dssp CCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHH
T ss_pred CCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCCccccccccccCchHHHHH
Confidence 346899999 999999889999999999999999996 69999999999999984
Q ss_pred -------------------------------------------------------ccccCCcCccCCCCCcEeecccCcC
Q 003780 109 -------------------------------------------------------LFGSIPSQVGALSKLRYLDFSFNNL 133 (796)
Q Consensus 109 -------------------------------------------------------l~~~~~~~~~~l~~L~~L~Ls~n~l 133 (796)
++| +|..|+++++|++|+|++|.+
T Consensus 140 ~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l 218 (636)
T 4eco_A 140 KMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF 218 (636)
T ss_dssp HHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCC
T ss_pred HHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcc
Confidence 445 788999999999999999999
Q ss_pred CCC-----------------CCCCCC--CCCCCCEEEecCCCCCCCCchhhhccCccceeeccccc-cCC-CCCccccCC
Q 003780 134 TGS-----------------IPPELG--SLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNG-LHG-PIPSAIGDL 192 (796)
Q Consensus 134 ~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l 192 (796)
++. +|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L 298 (636)
T 4eco_A 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298 (636)
T ss_dssp CGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHH
T ss_pred ccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhh
Confidence 985 999999 99999999999999999999999999999999999998 998 889988887
Q ss_pred ------CCccEEEcccccccCcchh--hhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCC
Q 003780 193 ------NNLLILSLDSNKLSGMLHQ--ELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNM 264 (796)
Q Consensus 193 ------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 264 (796)
++|++|+|++|+++ .+|. .++++++|+.|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+.++
T Consensus 299 ~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 375 (636)
T 4eco_A 299 ADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGF 375 (636)
T ss_dssp HHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEE
T ss_pred hccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhh
Confidence 99999999999999 6676 89999999999999999998899 8999999999999999999 889899999
Q ss_pred cc-cceeecccccccccCcccccccc--ccccccccCccccCccccccc-------cccccceecccccccccCCCcccC
Q 003780 265 TG-ILKVDMSMNNIEGTIPLELTRLS--QLLYLSISSNMLSGQIPITIA-------GLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 265 ~~-L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
++ |+.|++++|+++ .+|..+..++ +|++|++++|.+++.+|..+. .+++|++|+|++|++++..+..+.
T Consensus 376 ~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~ 454 (636)
T 4eco_A 376 TEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFS 454 (636)
T ss_dssp CTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHH
T ss_pred cccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHc
Confidence 99 999999999999 7888887755 899999999999999998888 788999999999999954444566
Q ss_pred CCCCCcEEEeecccccCCCCccc-ccc--------ccceEEecccccCCCCCcccc-----ccccccccCCCCcccCCCC
Q 003780 335 KCSELRNITLRNNNLSGSIPPEI-GLM--------KLEYLDLSHNKLNGTIPPFLY-----HRFPLDLSYNDLEGEIPDY 400 (796)
Q Consensus 335 ~l~~L~~L~L~~N~l~~~~~~~~-~~~--------~L~~L~l~~N~l~~~~p~~~~-----~~~~l~l~~N~l~~~~p~~ 400 (796)
.+++|+.|+|++|+++ .+|... ... +|++|+|++|+++ .+|..+. ++..|+|++|.+++ +|..
T Consensus 455 ~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~ 531 (636)
T 4eco_A 455 TGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ 531 (636)
T ss_dssp TTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred cCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChh
Confidence 7899999999999999 556543 322 8999999999999 7886554 56689999999998 7765
Q ss_pred CCC
Q 003780 401 FRD 403 (796)
Q Consensus 401 ~~~ 403 (796)
+..
T Consensus 532 ~~~ 534 (636)
T 4eco_A 532 PLN 534 (636)
T ss_dssp GGG
T ss_pred hhc
Confidence 543
No 18
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-46 Score=450.76 Aligned_cols=366 Identities=33% Similarity=0.490 Sum_probs=233.4
Q ss_pred CCchHHHhhcHHHHH-HhhcCCccccCCCCCCCCCccCCceeeCCCCCeEEEeCCCCCcccc---ccc------------
Q 003780 27 TTDDICVAAFELERE-ALVNSSWWSNLIDSNSSDHCKLDGVTCNTARSIIEINLPEKKLKGE---LSQ------------ 90 (796)
Q Consensus 27 ~~~~~~~~~~~~~~~-~l~~~~w~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~---~~~------------ 90 (796)
..|..++.+||+... ...-++| ..++|||+|+||+|+ .++|+.|+|+++++.|. +++
T Consensus 11 ~~~~~all~~k~~~~~~~~l~~W------~~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 11 YREIHQLISFKDVLPDKNLLPDW------SSNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp HHHHHHHHHHHTTCSCTTSSTTC------CTTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred HHHHHHHHHHHhhCCCcccccCC------CCCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 335566666664321 0011345 246799999999999 78999999999999987 443
Q ss_pred ----------cccCCCCCCcEEeccCCcccccCCc--CccCCCCCcEeecccCcCCCCCCCCC-CCCCCCCEEEecCCCC
Q 003780 91 ----------FNFSCFPGLESLSLRFNYLFGSIPS--QVGALSKLRYLDFSFNNLTGSIPPEL-GSLRNLEVLNLKGNNL 157 (796)
Q Consensus 91 ----------~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~L~~N~l 157 (796)
..|+.+++|++|+|++|.+.|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 3688999999999999999998888 89999999999999999998888776 7899999999999999
Q ss_pred CCCCchh---hhccCccceeeccccccC----------------------CCCCccccCCCCccEEEcccccccCcchhh
Q 003780 158 NGAIPSS---LCQLTKLITMALSRNGLH----------------------GPIPSAIGDLNNLLILSLDSNKLSGMLHQE 212 (796)
Q Consensus 158 ~~~~p~~---~~~l~~L~~L~L~~N~l~----------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 212 (796)
++..|.. +.++++|++|++++|.++ +.+|. ++++++|++|+|++|++++.+|..
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~ 242 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRA 242 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHH
Confidence 8877766 555555555555555554 44443 445555555555555555555555
Q ss_pred hcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCC-cccceeecccccccccCcccccccccc
Q 003780 213 LGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNM-TGILKVDMSMNNIEGTIPLELTRLSQL 291 (796)
Q Consensus 213 ~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L 291 (796)
++++++|++|++++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|+.|+|++|++++.+|..|+++++|
T Consensus 243 l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 243 ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp TTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 555555555555555555444433 44555555555555555555555443 555555555555555555555555555
Q ss_pred ccccccCccccCccccc-cccccccceecccccccccCCCcccCCCC-CCcEEEeecccccCCCCcccc---ccccceEE
Q 003780 292 LYLSISSNMLSGQIPIT-IAGLISLKGLDLSNNKLSGPIPPEIGKCS-ELRNITLRNNNLSGSIPPEIG---LMKLEYLD 366 (796)
Q Consensus 292 ~~L~l~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~---~~~L~~L~ 366 (796)
++|++++|.++|.+|.. +..+++|++|+|++|++++.+|..+..++ +|+.|+|++|++++.+|..+. +++|++|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 55555555555555543 55555555555555555555555555554 555555555555555554442 34566666
Q ss_pred ecccccCCCCCcccc---ccccccccCCCCcccCCCCCC
Q 003780 367 LSHNKLNGTIPPFLY---HRFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 367 l~~N~l~~~~p~~~~---~~~~l~l~~N~l~~~~p~~~~ 402 (796)
+++|++++.+|..+. ++..|++++|.++|.+|..+.
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 439 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHh
Confidence 666666665655443 334566666666666665543
No 19
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=402.80 Aligned_cols=259 Identities=24% Similarity=0.294 Sum_probs=202.5
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe------c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------K 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~ 570 (796)
.++|++.+.||+|+||+||+|+. .+|+.||||++........ ..+.+.+|+++|++++|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT-NAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHH-HHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchH-HHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 35799999999999999999975 5799999999976554332 34678899999999999999999999864 3
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
+..|+||||++ |+|.+++.+.. .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 68999997643 499999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH--
Q 003780 651 ARLLDSD----SSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID-- 723 (796)
Q Consensus 651 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-- 723 (796)
|+.+... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.. .....+..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-----~~l~~I~~~~ 279 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-----HQLQLIMMVL 279 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-----HHHHHHHHHH
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHhc
Confidence 9876432 2223456899999999998775 5689999999999999999999999743210 00000000
Q ss_pred ---------------------hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 724 ---------------------VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 724 ---------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....................+.+|+.+||+.||++|||++|+++|-
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 0111111111111111123577999999999999999999999984
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-44 Score=390.74 Aligned_cols=198 Identities=26% Similarity=0.344 Sum_probs=170.7
Q ss_pred HHHHhcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
+....++|++.+.||+|+||+||+|+.+ .++.||+|++..... ..++.+|+++++.+ +|||||++++++.
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 3345688999999999999999999643 478999999876543 24678899999998 6999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEee
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVAD 647 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~D 647 (796)
+++..++||||+++|+|.+++.. +++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred ECCEEEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 99999999999999999999842 78999999999999999999999 99999999999999877 7999999
Q ss_pred eccccccCCCCC----------------------------CccccccccCccCccccccC-CcCcchhHHHHHHHHHHHH
Q 003780 648 FGTARLLDSDSS----------------------------NRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVL 698 (796)
Q Consensus 648 fg~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~ell 698 (796)
||+|+....... .....+||+.|+|||++.+. .|+.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 999986543211 11235799999999998875 4889999999999999999
Q ss_pred hCCCCCc
Q 003780 699 MGRHPGE 705 (796)
Q Consensus 699 tg~~p~~ 705 (796)
+|+.||.
T Consensus 242 ~G~~Pf~ 248 (361)
T 4f9c_A 242 SGRYPFY 248 (361)
T ss_dssp HTCSSSS
T ss_pred HCCCCCC
Confidence 9999985
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.4e-44 Score=404.95 Aligned_cols=254 Identities=22% Similarity=0.240 Sum_probs=203.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHH---HHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFN---SFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~---~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.......... ....++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999754 7999999999765433222222 334446677788999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
|+||||++||+|.+++.+.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
+.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||...... ................+
T Consensus 342 ~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-----~~~~i~~~i~~~~~~~p 414 (689)
T 3v5w_A 342 FSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTLTMAVELP 414 (689)
T ss_dssp CSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-----CHHHHHHHHHHCCCCCC
T ss_pred cCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHhhcCCCCCCC
Confidence 65432 334679999999999964 57999999999999999999999999743221 11122222223222211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPT-----MQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 769 (796)
. .....+.+++.+||+.||.+|++ ++||++|-
T Consensus 415 --~---~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 415 --D---SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp --T---TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred --c---cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 1 11234779999999999999998 78888773
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-43 Score=406.35 Aligned_cols=254 Identities=23% Similarity=0.301 Sum_probs=210.0
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||+||+|+. .+|+.||+|++......+ .+.+.+|+++|+.++|||||++++++.+++..++|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~---~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH---HHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhh---HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999975 479999999997655332 35788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC--CcEEEeeecccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK--LEAFVADFGTARLL 654 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~a~~~ 654 (796)
||||++|+|.+++.+.. ..+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999996532 2489999999999999999999999 99999999999999864 89999999999987
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.... ....+..+..........
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCDWNMDDS 378 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCCCCCSG
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHhCCCCCCcc
Confidence 643 23345679999999999999999999999999999999999999997322 222233333322221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
........+.+|+.+||+.||++|||++|+++|-
T Consensus 379 -~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 379 -AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp -GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred -cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1111223477999999999999999999999974
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.4e-43 Score=421.05 Aligned_cols=329 Identities=22% Similarity=0.274 Sum_probs=279.8
Q ss_pred CceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEec-cCCccccc------------------------------
Q 003780 64 DGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSL-RFNYLFGS------------------------------ 112 (796)
Q Consensus 64 ~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L-~~n~l~~~------------------------------ 112 (796)
.||+|+..++|+.|+|+++++.|.+++ .|++|++|++|+| ++|.+.|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~ 393 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLD 393 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTC
T ss_pred CceEecCCCCEEEEECccCCCCCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhc
Confidence 999999889999999999999999996 5999999999999 77766544
Q ss_pred ----------------------------------------------CCcCccCCCCCcEeecccCcCCC-----------
Q 003780 113 ----------------------------------------------IPSQVGALSKLRYLDFSFNNLTG----------- 135 (796)
Q Consensus 113 ----------------------------------------------~~~~~~~l~~L~~L~Ls~n~l~~----------- 135 (796)
+|..|+++++|++|+|++|.|++
T Consensus 394 ~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s 473 (876)
T 4ecn_A 394 YDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDAN 473 (876)
T ss_dssp CCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred cCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccc
Confidence 78889999999999999999998
Q ss_pred ------CCCCCCC--CCCCCCEEEecCCCCCCCCchhhhccCccceeeccccc-cCC-CCCccccCCC-------CccEE
Q 003780 136 ------SIPPELG--SLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNG-LHG-PIPSAIGDLN-------NLLIL 198 (796)
Q Consensus 136 ------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L 198 (796)
.+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|++|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 3899988 99999999999999999999999999999999999998 988 7888777665 99999
Q ss_pred EcccccccCcchh--hhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcc-cceeecccc
Q 003780 199 SLDSNKLSGMLHQ--ELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTG-ILKVDMSMN 275 (796)
Q Consensus 199 ~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N 275 (796)
+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .+.++++|+.|+|++|+++ .+|..+.++++ |+.|+|++|
T Consensus 554 ~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 554 YMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp ECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred EeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 99999999 6677 8999999999999999999 777 8999999999999999999 89989999999 999999999
Q ss_pred cccccCccccccccc--cccccccCccccCcccccc---c--cccccceecccccccccCCCcc-cCCCCCCcEEEeecc
Q 003780 276 NIEGTIPLELTRLSQ--LLYLSISSNMLSGQIPITI---A--GLISLKGLDLSNNKLSGPIPPE-IGKCSELRNITLRNN 347 (796)
Q Consensus 276 ~l~~~~p~~l~~l~~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N 347 (796)
+++ .+|..+..++. |+.|+|++|.+++.+|... . .+++|+.|+|++|+++ .+|.. +..+++|+.|+|++|
T Consensus 630 ~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N 707 (876)
T 4ecn_A 630 KLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNN 707 (876)
T ss_dssp CCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSC
T ss_pred CCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCC
Confidence 999 77888877654 9999999999988766332 2 3347888888888888 45544 447888888888888
Q ss_pred cccCCCCccc-cc--------cccceEEecccccCCCCCcccc-----ccccccccCCCCcccCCCCCC
Q 003780 348 NLSGSIPPEI-GL--------MKLEYLDLSHNKLNGTIPPFLY-----HRFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 348 ~l~~~~~~~~-~~--------~~L~~L~l~~N~l~~~~p~~~~-----~~~~l~l~~N~l~~~~p~~~~ 402 (796)
+++ .+|... .. ++|+.|+|++|+++ .+|..+. ++..|+|++|.+++ +|..+.
T Consensus 708 ~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~ 773 (876)
T 4ecn_A 708 LMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL 773 (876)
T ss_dssp CCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG
T ss_pred cCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhh
Confidence 888 555443 22 27888888888888 6775543 45678888888887 565443
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3e-43 Score=377.97 Aligned_cols=290 Identities=35% Similarity=0.575 Sum_probs=231.9
Q ss_pred CCcccHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEe
Q 003780 486 DGRIAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYG 565 (796)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 565 (796)
...+++.++....++|++.+.||+|+||.||+|+.++|+.||||++........ ...+.+|++++++++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEE
Confidence 446788999999999999999999999999999988899999999986654322 236899999999999999999999
Q ss_pred EEEecceeeEEEeeccCCcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 566 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
++..++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999986542 34589999999999999999999998778999999999999999999999
Q ss_pred EeeeccccccCCCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 645 VADFGTARLLDSDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|+|||+++........ .....||+.|+|||++.+..++.++||||+||++|+|++|+.||+..................
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876543322 334559999999999988889999999999999999999999996332211111111111111
Q ss_pred ---------hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCcccc
Q 003780 724 ---------VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEE 782 (796)
Q Consensus 724 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 782 (796)
..+..... .........+.+++.+||+.||++|||++||+++|+.... ..+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~--~~~~~~ 317 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQG---NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL--AERWEE 317 (326)
T ss_dssp TTSSCCSTTSSCTTCTT---SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC--SSSCC-
T ss_pred HhhchhhhhhcChhhcc---ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch--hhhhhh
Confidence 11111111 1234455679999999999999999999999999998655 334544
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1e-42 Score=370.31 Aligned_cols=268 Identities=29% Similarity=0.408 Sum_probs=207.5
Q ss_pred HHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
...++|++.+.||+|+||+||+|+. +|+.||||++....... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 3457899999999999999999977 58899999998765443 235688999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS--IVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
||||+++|+|.+++........+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999998765445589999999999999999999998 8 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
............||+.|+|||++.+..++.++|||||||++|||++|+.||.... .................
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--------~~~~~~~~~~~~~~~~~ 260 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--------PAQVVAAVGFKCKRLEI 260 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHHSCCCCCC
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcCCCCCC
Confidence 5544333445679999999999999999999999999999999999999987322 11122222111111111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCc
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNP 779 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 779 (796)
.. .....+.+++.+||+.||++|||++|+++.|+.......++
T Consensus 261 ~~---~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 261 PR---NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred Cc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 11 12234789999999999999999999999998876554443
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5e-42 Score=363.03 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=209.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||+||+|.. .+|+.||+|++....... .+.+.+|+.++++++||||+++++++..++..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 46899999999999999999975 579999999997655433 35788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999764 388999999999999999999999 999999999999999999999999999987766
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC-CCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL-SPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 735 (796)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............ ....
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~-- 238 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGTPELQN-- 238 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHHCSCCCSC--
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC--
Confidence 55555566799999999999999999999999999999999999999873221 111111111111 1111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+.+++.+||+.||++|||++|++++-
T Consensus 239 -~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 239 -PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 112233478999999999999999999999874
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.1e-41 Score=362.40 Aligned_cols=265 Identities=24% Similarity=0.349 Sum_probs=216.0
Q ss_pred CCcccHHHHHHHhcC----------CccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhh
Q 003780 486 DGRIAFEDIIKATED----------FDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSK 554 (796)
Q Consensus 486 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~ 554 (796)
.+.++++++..+++. |+..+.||+|+||.||+|+.+ +|+.||||++....... .+.+.+|+.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~ 98 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---RELLFNEVVIMRD 98 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS---HHHHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH---HHHHHHHHHHHHh
Confidence 346778888877764 777889999999999999865 79999999997654332 4578899999999
Q ss_pred cCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 555 l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
++||||+++++++...+..++||||+++|+|.+++.+. .+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 99999999999999999999999999999999998753 389999999999999999999999 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCC
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPS 714 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~ 714 (796)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~----- 246 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----- 246 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 999999999999999998776544444556799999999999999999999999999999999999999873211
Q ss_pred chhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 715 SDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......... ..+.... .......+.+++.+||+.||++|||++|++++-.
T Consensus 247 ---~~~~~~~~~~-~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 247 ---VQAMKRLRDS-PPPKLKN-SHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp ---HHHHHHHHHS-SCCCCTT-GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred ---HHHHHHHhcC-CCCCcCc-cccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 1111122221 1111111 1122335789999999999999999999998754
No 28
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-41 Score=359.00 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=212.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46799999999999999999975 47899999999776555555567899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999998653 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ........+..........
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--------AVSIAIKHIQDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--------HHHHHHHHHSSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhhccCCCcchh
Confidence 322 2334569999999999999999999999999999999999999997321 1112222223222221111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhhcCcc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP-TMQRVCQEFLTCKIA 775 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~ 775 (796)
........+.+++.+|++.||++|| +++++.+.|+.....
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 1122234588999999999999998 899999999876543
No 29
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.2e-41 Score=364.70 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=209.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||++....... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 46899999999999999999975 589999999997765433 2356788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999997653 389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. ......+||+.|+|||++.+..+. .++||||+||++|+|++|+.||.... .......+.......+.
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~p~-- 235 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGKYRIPF-- 235 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCT--
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCC--
Confidence 3 233456799999999999887765 78999999999999999999997321 12222233333222211
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+||+.||.+|||++|+++|-
T Consensus 236 ---~~s~~~~~li~~~L~~dP~~R~t~~eil~h~ 266 (328)
T 3fe3_A 236 ---YMSTDCENLLKRFLVLNPIKRGTLEQIMKDR 266 (328)
T ss_dssp ---TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred ---CCCHHHHHHHHHHCCCChhHCcCHHHHhcCH
Confidence 1123477899999999999999999999984
No 30
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=359.22 Aligned_cols=261 Identities=26% Similarity=0.429 Sum_probs=211.2
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||+||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 36799999999999999999975 4699999999865432 2356899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999998643 3489999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCCc--------------cccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 657 DSSNR--------------TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 657 ~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
..... ....||+.|+|||++.+..++.++||||||+++|||++|..|+........... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~~ 237 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG---LNVR 237 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS---BCHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh---hhhh
Confidence 32211 145699999999999999999999999999999999999999874332211111 1111
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
........+... ..+.+++.+||+.||++|||++|+++.|+......
T Consensus 238 ~~~~~~~~~~~~-------~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 238 GFLDRYCPPNCP-------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHHTCCTTCC-------TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 222222222111 13678999999999999999999999998876443
No 31
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.2e-41 Score=363.57 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=211.2
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999765 6999999999765433333356788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999997643 489999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~--- 226 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEEIRFPR--- 226 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCT---
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCC---
Confidence 4444455679999999999999999999999999999999999999987321 12222333333222111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
.....+.+++.+||+.||++|| +++|+++|-
T Consensus 227 --~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred --CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 1123477899999999999999 899998873
No 32
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=371.57 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=208.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++..........+.+..|..++.++ +||||+++++++..++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999755 6889999999876554444456788999999887 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999998653 389999999999999999999999 99999999999999999999999999998644
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc-hhhhHHHHhhcCCCCCccc
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS-DQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 734 (796)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... ........+.......+.
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~- 283 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR- 283 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT-
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC-
Confidence 444445567899999999999999999999999999999999999999974332111111 112222333333332211
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTM------QRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 768 (796)
.....+.+++.+||+.||++||++ +|+++|
T Consensus 284 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 284 ----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ----TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ----cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 112347789999999999999985 677766
No 33
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-41 Score=365.00 Aligned_cols=274 Identities=34% Similarity=0.512 Sum_probs=220.5
Q ss_pred cHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 490 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
++.++..++++|++.+.||+|+||.||+|+.++|+.||||++...... ..+.+.+|++++++++||||+++++++..
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 344455577899999999999999999999888999999998765433 24678999999999999999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
++..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999987543 223589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCC--CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhH------
Q 003780 649 GTARLLDSDS--SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIM------ 720 (796)
Q Consensus 649 g~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~------ 720 (796)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 9998654322 22234568999999999988899999999999999999999999987433321111110000
Q ss_pred -HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 721 -LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 721 -~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
....+++.... .........+.+++.+||+.||++|||++|++++|+..
T Consensus 264 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 264 QLEQIVDPNLAD---KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp CCCSSSSSSCTT---CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHhcChhhcc---ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 00111111111 12344566788999999999999999999999999865
No 34
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.1e-41 Score=363.17 Aligned_cols=259 Identities=24% Similarity=0.372 Sum_probs=210.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV 576 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|..+++++ +||||+++++++..++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999765 6899999999876655444566788999999988 899999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999998653 389999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc-hhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS-DQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 735 (796)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||........... ........+.......+.
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-- 240 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-- 240 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT--
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC--
Confidence 44444556799999999999999999999999999999999999999974322111111 111222223333222111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTM------QRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 768 (796)
.....+.+++.+||+.||++||++ +|+++|
T Consensus 241 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 241 ---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 112347789999999999999996 677766
No 35
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=374.44 Aligned_cols=257 Identities=21% Similarity=0.243 Sum_probs=210.8
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||+||+|.. .+|+.||+|++........ ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHH-HHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHH-HHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 457899999999999999999964 5799999999987665433 25678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec---CCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN---SKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~ 652 (796)
||||+++|+|.+.+.... .+++..+..++.||++||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999998653 389999999999999999999999 999999999999998 45789999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
.............||+.|+|||++.+..++.++||||+||++|+|++|+.||... ........+.......+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~~~~~~~~ 233 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--------DQHRLYQQIKAGAYDFP 233 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHTCCCCC
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHhCCCCCC
Confidence 7765544445567999999999999989999999999999999999999998632 12222223332222211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... .......+.+++.+||+.||++|||++|+++|-
T Consensus 234 ~~~-~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 234 SPE-WDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp TTT-TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred ccc-cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 110 111223478999999999999999999999974
No 36
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-40 Score=353.69 Aligned_cols=278 Identities=32% Similarity=0.505 Sum_probs=224.9
Q ss_pred CcccHHHHHHHhcCCccc------eeeecccceeEEEEEccCCcEEEEEEeccccc-hhhHHHHHHHHHHHHHhhcCCCc
Q 003780 487 GRIAFEDIIKATEDFDIK------YCIGTGGYGSVYKAQLPNGKVVALKKLHRAET-EETTFFNSFQNEAHVLSKIAHRN 559 (796)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpn 559 (796)
..++++++..+++.|... +.||+|+||.||+|.. +++.||||++..... ......+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467889999999999887 8999999999999987 588999999976432 22233568999999999999999
Q ss_pred eeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 560 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
|+++++++..++..++||||+++|+|.+++........+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999998655555689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchh
Q 003780 640 KLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~ 717 (796)
++.+||+|||+++........ .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||.............
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 233468999999998765 57899999999999999999999997543321111100
Q ss_pred h------hHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 718 K------IMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 718 ~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
. ..+...++..+. .........+.+++.+||+.||++|||++|++++|++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMN----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCS----CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhcccccc----ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 0 011222233222 123344556889999999999999999999999998764
No 37
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.2e-41 Score=355.82 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=204.0
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||+||+|+.++|+.||+|++....... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccc-hhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 357899999999999999999998889999999997654332 2346788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++ +|.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 8888877543 3489999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc--
Q 003780 657 DSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV-- 733 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 733 (796)
.........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... .....+............
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-----DQLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-----THHHHHHHHHCCCCTTTSGG
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHHCCCChHHhhh
Confidence 4444455678999999999876 56899999999999999999999999743221 111111111111111000
Q ss_pred --------------------chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 734 --------------------DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 734 --------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.........++.+++.+||+.||++|||++|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00011112357899999999999999999999986
No 38
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.8e-41 Score=366.64 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=211.0
Q ss_pred hcCCccceeeecccceeEEEEEc--------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL--------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++|++.+.||+|+||.||+|+. .++..||||+++..... ...+.+.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBH--HHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCH--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 46899999999999999999974 24568999999766432 2356899999999999 8999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
.++..++||||+++|+|.+++..... ...+++..+..++.||++||+|||++ +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999986532 23478999999999999999999999 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--- 311 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 311 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 9999999999999999876543322 223457789999999999999999999999999999999 9999874221
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
. .....+.......... .....+.+++.+||+.||++||++.|++++|+.+.
T Consensus 312 -----~-~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 312 -----E-ELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp -----G-GHHHHHHTTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----H-HHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 1122222222222111 12234789999999999999999999999998764
No 39
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=366.64 Aligned_cols=254 Identities=21% Similarity=0.342 Sum_probs=206.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|..+++.+ +||||+++++++..++..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3478999999999999999999754 6899999999876544444456788999999988 6999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999998653 389999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+.
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~~~~p~- 245 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--------NEDDLFEAILNDEVVYPT- 245 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCCCT-
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCCCCCCC-
Confidence 44444455567999999999999989999999999999999999999999732 222333344443332221
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTM------QRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~L 769 (796)
.....+.+++.+||+.||++||++ +|+++|-
T Consensus 246 ----~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 246 ----WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred ----CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 112347789999999999999998 7787763
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=363.55 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=201.4
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||+||+|+. .+|+.||||++........ .+.+.+|++++++++||||+++++++...+..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchH--HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 467899999999999999999974 5799999999977654322 3578999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999997653 389999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC-CCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 656 SDS-SNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 656 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.... .......+.......+.
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~ 231 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMRGKYDVPK 231 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCCT
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCCC
Confidence 332 22345679999999999988775 889999999999999999999997321 12222233333222111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.+++.+||+.||++|||++|++++-.
T Consensus 232 -----~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 232 -----WLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp -----TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred -----CCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 11223678999999999999999999999853
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.5e-41 Score=362.78 Aligned_cols=258 Identities=22% Similarity=0.305 Sum_probs=210.7
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++........ ...+.+.+|+.++++++||||+++++++..++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3568999999999999999999755 699999999987654321 124578999999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC----cEEEeee
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL----EAFVADF 648 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Df 648 (796)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999997543 489999999999999999999999 999999999999998877 7999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
|++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... ........+....
T Consensus 164 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--------~~~~~~~~i~~~~ 234 (361)
T 2yab_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVS 234 (361)
T ss_dssp SSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTC
T ss_pred CCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcC
Confidence 9998765432 233456999999999999989999999999999999999999999732 1222233333322
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..... .........+.+++.+||+.||++|||+.|+++|-.
T Consensus 235 ~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 235 YDFDE-EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp CCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred CCCCc-hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 22111 111122345789999999999999999999998743
No 42
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-40 Score=346.93 Aligned_cols=256 Identities=23% Similarity=0.405 Sum_probs=211.1
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|+||.||+|+.++++.||+|++...... .+++.+|++++++++||||+++++++..++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 4689999999999999999999888889999999866543 256899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997643 3489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
... .....+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... .......... ........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~~~ 228 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT--------NSEVVLKVSQ-GHRLYRPH 228 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHT-TCCCCCCT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC--------hHHHHHHHHc-CCCCCCCC
Confidence 221 122346678999999998889999999999999999999 999987322 1111222211 11111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
. ....+.+++.+|++.||++|||++|++++|+....
T Consensus 229 ~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 229 L---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp T---SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred c---ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1 12347899999999999999999999999998764
No 43
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.3e-41 Score=363.87 Aligned_cols=259 Identities=19% Similarity=0.259 Sum_probs=209.5
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhh--HHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEET--TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
.++|++.+.||+|+||+||+|.. .+|+.||||++........ ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45799999999999999999975 4799999999875432211 12457899999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEeeecc
Q 003780 575 LIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVADFGT 650 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~ 650 (796)
+||||+++|+|.+.+.+.. ....+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988876542 223489999999999999999999999 9999999999999987655 99999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
++.............||+.|+|||++.+..++.++||||+||++|+|++|+.||... .......+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---------~~~~~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---------KERLFEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---------HHHHHHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---------HHHHHHHHHcCCCC
Confidence 988765444444567999999999999999999999999999999999999998732 12222233333222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... ........+.+++.+||+.||++|||+.|+++|-
T Consensus 251 ~~~~-~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 288 (351)
T 3c0i_A 251 MNPR-QWSHISESAKDLVRRMLMLDPAERITVYEALNHP 288 (351)
T ss_dssp CCHH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCcc-ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence 2111 0111234578999999999999999999999874
No 44
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.9e-41 Score=359.86 Aligned_cols=267 Identities=25% Similarity=0.351 Sum_probs=209.1
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----ee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----CM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~ 573 (796)
.++|++.+.||+|+||+||+|+.. ++.||||++...... ......|+.++++++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ----SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH----HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 468999999999999999999875 899999999654322 235667999999999999999999998754 46
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc-------CCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD-------CMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
++||||+++|+|.++++.. .+++..+..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999764 389999999999999999999986 23489999999999999999999999
Q ss_pred eeccccccCCCCCC--ccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc----
Q 003780 647 DFGTARLLDSDSSN--RTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS---- 715 (796)
Q Consensus 647 Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~---- 715 (796)
|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 99999876543322 233569999999999886 3566789999999999999999999875332111110
Q ss_pred ----hhhhHHHHhhcCCCCCccchh--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 716 ----DQKIMLIDVLDSRLSPPVDRM--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 716 ----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...............+..... .......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111112222233333322221 1233456889999999999999999999999998764
No 45
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-41 Score=349.97 Aligned_cols=255 Identities=25% Similarity=0.425 Sum_probs=210.5
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|+||.||+|...+++.||+|++...... .+++.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 3579999999999999999999888999999999876543 246899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999997643 3489999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. ......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ........ ..........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~~~ 230 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDI-STGFRLYKPR 230 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHH-HTTCCCCCCT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHH-hcCccCCCCC
Confidence 11 1223346778999999998899999999999999999999 999987321 11122222 2222222111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
. ....+.+++.+|++.||++||+++|++++|++..
T Consensus 231 ~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 231 L---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred c---CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 1 1234789999999999999999999999998764
No 46
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-41 Score=357.03 Aligned_cols=254 Identities=21% Similarity=0.267 Sum_probs=210.3
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +++.||+|.+...... ...+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD----QVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH----HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCccc----HHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 468999999999999999999754 6899999998754322 35688999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC--CCcEEEeeecccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS--KLEAFVADFGTARLL 654 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~ 654 (796)
|||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999997542 3489999999999999999999999 9999999999999997 789999999999877
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||... ........+..........
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--------TNQQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTCCCCCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--------CHHHHHHHHHcCCCCCChh
Confidence 543 2334466999999999999988999999999999999999999999732 1222333333333322211
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
........+.+++.+||+.||++|||+.|+++|-.
T Consensus 226 -~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 226 -AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp -HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred -hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 11122345789999999999999999999999853
No 47
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=356.49 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=207.6
Q ss_pred hcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|+.. .+..||||++....... ..+.+.+|++++++++||||+++++++..++..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHH--HHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHH--HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 357899999999999999999764 45569999997654332 246799999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999997543 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSNR---TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
........ ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ..... ..+....
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~~-~~~~~~~ 271 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--------NRDVI-SSVEEGY 271 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--------HHHHH-HHHHTTC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--------HHHHH-HHHHcCC
Confidence 65432221 22335778999999998899999999999999999999 999986321 11122 2222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
..+... .....+.+++.+||+.||++|||++|+++.|+....
T Consensus 272 ~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 272 RLPAPM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCC---CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 222111 122347899999999999999999999999987643
No 48
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-40 Score=362.49 Aligned_cols=257 Identities=23% Similarity=0.317 Sum_probs=209.9
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ +|+.||+|++........ ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHH-HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4568999999999999999999754 689999999987654332 35678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~ 652 (796)
||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999987543 489999999999999999999999 999999999999998654 59999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+
T Consensus 180 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~~i~~~~~~~~ 250 (362)
T 2bdw_A 180 EVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIKAGAYDYP 250 (362)
T ss_dssp CCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCC
T ss_pred EecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 765432 2334579999999999999899999999999999999999999987321 1222222222222211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... .......+.+++.+||+.||++||+++|++++-.
T Consensus 251 ~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 251 SPE-WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp TTG-GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred ccc-ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 110 1122345789999999999999999999998843
No 49
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=353.02 Aligned_cols=267 Identities=22% Similarity=0.295 Sum_probs=213.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc--eee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK--CMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~ 574 (796)
.++|.+.+.||+|+||+||+|+.. +|+.||||++........ .+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 357999999999999999999765 599999999976543322 457889999999999999999999998765 779
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----cCCCcEEEeeecc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFGT 650 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~ 650 (796)
+||||+++|+|.+++........+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998765555589999999999999999999999 99999999999999 7888899999999
Q ss_pred ccccCCCCCCccccccccCccCccccc--------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAY--------TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...... ........
T Consensus 163 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~ 237 (319)
T 4euu_A 163 ARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMY 237 (319)
T ss_dssp CEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG----GGCHHHHH
T ss_pred ceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc----chhHHHHH
Confidence 987654432 23456999999999876 567889999999999999999999998743221 11122222
Q ss_pred HhhcCCCC--------------------CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 723 DVLDSRLS--------------------PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 723 ~~~~~~~~--------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
..+..... +............+.+++.+||+.||++|||++|++++......
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 22221110 11112233445568899999999999999999999999976543
No 50
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.4e-41 Score=364.20 Aligned_cols=257 Identities=23% Similarity=0.276 Sum_probs=202.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHH-HhhcCCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHV-LSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+..|..+ ++.++||||+++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357999999999999999999765 688999999987665443334566777776 577899999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999998643 388899999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......++........
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~-- 260 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKPLQLKP-- 260 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSCCCCCS--
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcccCCCC--
Confidence 44444556779999999999999999999999999999999999999997321 22333334443332111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.....+.+++.+||+.||++||++.+.+++++.+.
T Consensus 261 ---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~ 295 (373)
T 2r5t_A 261 ---NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHV 295 (373)
T ss_dssp ---SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSG
T ss_pred ---CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCc
Confidence 11234778999999999999999865555555443
No 51
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-41 Score=360.16 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=205.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36899999999999999999975 57999999999765444333345789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+ +|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 789999887643 389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. .....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+........ ..+...... ..
T Consensus 161 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---------~~i~~~~~~-~p- 228 (336)
T 3h4j_B 161 GN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF---------KKVNSCVYV-MP- 228 (336)
T ss_dssp SB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB---------CCCCSSCCC-CC-
T ss_pred Cc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH---------HHHHcCCCC-Cc-
Confidence 32 2334579999999999988776 68999999999999999999999743221100 000111100 11
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
......+.+++.+||+.||.+|||++|++++-.
T Consensus 229 --~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 229 --DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 111234778999999999999999999998843
No 52
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.9e-41 Score=361.88 Aligned_cols=254 Identities=23% Similarity=0.330 Sum_probs=208.4
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEeccee
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 573 (796)
...++|++.+.||+|+||.||+|+.+ +|+.||+|+++..........+.+..|..++..+ +||||+++++++..++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34678999999999999999999765 6899999999875433333345778899999887 899999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999998643 389999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p- 238 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIRMDNPFYP- 238 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC-
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCCCCCC-
Confidence 5443344455679999999999999999999999999999999999999997321 1222222222222111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQ-RVCQE 768 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 768 (796)
. .....+.+++.+||+.||++||++. |+++|
T Consensus 239 -~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 239 -R---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -T---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -c---ccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1 1123477899999999999999998 77655
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=356.35 Aligned_cols=256 Identities=25% Similarity=0.317 Sum_probs=208.6
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|..+ +|+.||+|++........ ...+.+.+|+.++++++||||+++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457999999999999999999764 699999999976543321 1245789999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC----cEEEeeec
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL----EAFVADFG 649 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg 649 (796)
++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997543 489999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .............
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVSAVNY 234 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHTCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHHhcCC
Confidence 998765432 2334569999999999998899999999999999999999999986321 1222222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... ..........+.+++.+||+.||++|||++|+++|-
T Consensus 235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 235 EFE-DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp CCC-HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred CcC-ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 111 111112234578999999999999999999999874
No 54
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.5e-40 Score=351.66 Aligned_cols=262 Identities=25% Similarity=0.409 Sum_probs=203.9
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|.+.+.||+|+||.||+|+.. ..+|+|+++...... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP-EQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 468999999999999999999874 368999887654433 33578999999999999999999999875 55688999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 3489999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 658 --SSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 658 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
........||+.|+|||++. +..++.++|||||||++|||++|+.||..... ..............+.
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~~~~~ 258 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-------RDQIIFMVGRGYASPD 258 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHHHTCCCCC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-------HHHHHHHHhcCCCCcc
Confidence 22233456999999999886 66788899999999999999999999974221 1111111111111222
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
...........+.+++.+||+.||++||++.|++++++.....
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1111122234588999999999999999999999999877543
No 55
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-40 Score=359.04 Aligned_cols=253 Identities=22% Similarity=0.380 Sum_probs=204.4
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc----
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK---- 571 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 571 (796)
..++|++.+.||+|+||.||+|+.+ +|+.||||++...... ...+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT--THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 3467999999999999999999765 7999999999765432 23468999999999999999999999986543
Q ss_pred -----------------------------------------------------eeeEEEeeccCCcHHHHHhhcCccccc
Q 003780 572 -----------------------------------------------------CMFLIYKYMKRGSLFCFLRNDYEAVVL 598 (796)
Q Consensus 572 -----------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~l 598 (796)
..++||||+++|+|.+++.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999987666667
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC------------Ccccccc
Q 003780 599 DWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS------------NRTIVAG 666 (796)
Q Consensus 599 ~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~g 666 (796)
++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999987765421 1233569
Q ss_pred ccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHH
Q 003780 667 TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTT 746 (796)
Q Consensus 667 t~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 746 (796)
|+.|+|||++.+..++.++||||+||++|||++|..|+.. ............. + .........+.+
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~~~~-~---~~~~~~~~~~~~ 304 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRNLKF-P---LLFTQKYPQEHM 304 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHTTCC-C---HHHHHHCHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhccCC-C---cccccCChhHHH
Confidence 9999999999999999999999999999999999877431 1111222222211 1 112223345688
Q ss_pred HHHHcCCCCCCCCCCHHHHHHH
Q 003780 747 VALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 747 li~~cl~~dP~~RPs~~evl~~ 768 (796)
++.+||+.||++|||++|++++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCCCcCCCHHHHhhc
Confidence 9999999999999999999986
No 56
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-40 Score=352.84 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=209.6
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357999999999999999999764 7999999999865443333456788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999998653 388999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~p~--- 224 (318)
T 1fot_A 159 V---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAELRFPP--- 224 (318)
T ss_dssp C---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCCCCCCT---
T ss_pred c---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCC---
Confidence 2 234579999999999999999999999999999999999999997321 22233334333332211
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
.....+.+++.+|++.||++|| +++|+++|-
T Consensus 225 --~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 225 --FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp --TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred --CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 1123477899999999999999 899998773
No 57
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.2e-40 Score=350.12 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=200.5
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh--cCCCceeeEEeEEEec----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK--IAHRNIVKLYGFCLHK----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~----~ 571 (796)
.++|++.+.||+|+||+||+|+. +|+.||||++.... .+.+..|.+++.. ++||||+++++++... .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46899999999999999999987 68999999986543 2345566666666 7899999999997653 4
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEecCCCCCeEecCCCcE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH--------HDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
..++||||+++|+|.++++.. .+++..+.+++.|+++||+||| +. +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 689999999999999999643 4899999999999999999999 76 99999999999999999999
Q ss_pred EEeeeccccccCCCCCC----ccccccccCccCccccccC------CcCcchhHHHHHHHHHHHHhC----------CCC
Q 003780 644 FVADFGTARLLDSDSSN----RTIVAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG----------RHP 703 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DVwSlGv~l~elltg----------~~p 703 (796)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999999876543322 2234699999999998876 556799999999999999999 777
Q ss_pred CcccccCCCCCchhhhHHHHhhcCCCCCcc--chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 704 GELLSSLSSPSSDQKIMLIDVLDSRLSPPV--DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
|....... ................+.. ..........+.+++.+||+.||++|||++|+++.|+++
T Consensus 233 f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPND---PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCC---cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 65322211 1111111111111111111 112233456789999999999999999999999999864
No 58
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-40 Score=350.49 Aligned_cols=258 Identities=26% Similarity=0.337 Sum_probs=200.7
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
++|++.+.||+|+||+||+|+..+|+.||+|++....... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc-ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 5799999999999999999988889999999997655332 223578899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
|+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9986 8998887543 3488999999999999999999999 99999999999999999999999999998765443
Q ss_pred CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC---------
Q 003780 659 SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR--------- 728 (796)
Q Consensus 659 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 728 (796)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHHCCCChhhchhhh
Confidence 334445689999999998764 589999999999999999999999874221 01111111111100
Q ss_pred --------CC----CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 729 --------LS----PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 729 --------~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.. .............+.+++.+||+.||++|||++|+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00000011123457799999999999999999999986
No 59
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.9e-40 Score=358.40 Aligned_cols=253 Identities=20% Similarity=0.290 Sum_probs=209.7
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999765 5889999999876543333356788999999988 7999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999998643 389999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~~~~p~- 242 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHNVAYPK- 242 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCCCT-
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCCCCCCC-
Confidence 44444445567999999999999999999999999999999999999999732 122333334333332211
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPT-----MQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 768 (796)
.....+.+++.+||+.||++||+ ++|+++|
T Consensus 243 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 ----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11234779999999999999995 5777766
No 60
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.2e-41 Score=365.67 Aligned_cols=258 Identities=24% Similarity=0.400 Sum_probs=209.6
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|.+.+.||+|+||.||+|+.+ +++.||||+++..... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP--DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCH--HHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 3468999999999999999999875 7999999999765332 224578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999998643 3488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 656 SDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 656 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... .......+......+
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~---------~~~~~~~~~~~~~~~ 335 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLP 335 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC---------HHHHHHHHHTTCCCC
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---------HHHHHHHHHcCCCCC
Confidence 32111 112235778999999998899999999999999999998 999987322 111222222222222
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.... ....+.+++.+||+.||++|||++++++.|++..
T Consensus 336 ~~~~---~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 336 CPEL---CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 2111 2234778999999999999999999999998764
No 61
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.2e-41 Score=373.79 Aligned_cols=263 Identities=24% Similarity=0.293 Sum_probs=212.0
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
+.++....++|++.+.||+|+||+||+|+.+ +++.||+|++...........+.+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556789999999999999999999865 588999999976543333333458899999999999999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
++..++||||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999998632 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC-ccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 650 TARLLDSDSSN-RTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 650 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
+++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--------~~~~~~~ 292 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGK 292 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--------hhHHHHh
Confidence 99876544332 23457999999999987 5678999999999999999999999997322 1122222
Q ss_pred hhc----CCCCCccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHh
Q 003780 724 VLD----SRLSPPVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEFL 770 (796)
Q Consensus 724 ~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~ 770 (796)
++. ...+..... ....+.+++.+|+..+|++ ||+++|+++|-.
T Consensus 293 i~~~~~~~~~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 293 IMNHKERFQFPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp HHTHHHHCCCCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred hhhccccccCCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 221 111111111 1234778999999999988 999999999843
No 62
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.5e-41 Score=365.48 Aligned_cols=268 Identities=24% Similarity=0.354 Sum_probs=213.0
Q ss_pred cHHHHHHHhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceee
Q 003780 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVK 562 (796)
Q Consensus 490 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~ 562 (796)
...++....++|++.+.||+|+||.||+|++ .+++.||||++....... ..+.+.+|++++.++ +||||++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH--HHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHH--HHHHHHHHHHHHHhhcCCcceee
Confidence 3445555678999999999999999999962 356899999997654332 246799999999999 7999999
Q ss_pred EEeEEEecce-eeEEEeeccCCcHHHHHhhcCc-----------------------------------------------
Q 003780 563 LYGFCLHKKC-MFLIYKYMKRGSLFCFLRNDYE----------------------------------------------- 594 (796)
Q Consensus 563 l~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 594 (796)
+++++.+++. .++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 8999999999999999986532
Q ss_pred ----------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCC
Q 003780 595 ----------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDS 658 (796)
Q Consensus 595 ----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 658 (796)
...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12288999999999999999999999 99999999999999999999999999998764432
Q ss_pred C--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 659 S--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 659 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. ......||+.|+|||++.+..++.++|||||||++|||++ |+.||..... .......+..........
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 319 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--------DEEFCRRLKEGTRMRAPD 319 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC--------SHHHHHHHHHTCCCCCCT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch--------hHHHHHHHHcCCCCCCCC
Confidence 2 2234568899999999999999999999999999999998 9999874221 111112222221111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.....+.+++.+||+.||++|||++|++++|++..
T Consensus 320 ---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 320 ---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 11234789999999999999999999999998764
No 63
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=351.46 Aligned_cols=254 Identities=20% Similarity=0.271 Sum_probs=199.2
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh-----------------------hHHHHHHHHHHHHHh
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE-----------------------TTFFNSFQNEAHVLS 553 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~ 553 (796)
.++|++.+.||+|+||.||+|+. .+++.||||++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36899999999999999999975 478999999997654221 112357899999999
Q ss_pred hcCCCceeeEEeEEEe--cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCC
Q 003780 554 KIAHRNIVKLYGFCLH--KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDIS 631 (796)
Q Consensus 554 ~l~hpniv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlk 631 (796)
+++||||+++++++.. .+..++||||+++++|.+++.. ..+++..+..++.|+++||+|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999987 5688999999999999876532 3489999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccc
Q 003780 632 SNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGRHPGELLS 708 (796)
Q Consensus 632 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DVwSlGv~l~elltg~~p~~~~~ 708 (796)
|+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444344567999999999987655 4778999999999999999999987321
Q ss_pred cCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...............+... .....+.+++.+||+.||++|||++|+++|-
T Consensus 245 --------~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 245 --------IMCLHSKIKSQALEFPDQP---DIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp --------HHHHHHHHHHCCCCCCSSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred --------HHHHHHHHhcccCCCCCcc---ccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 1111222222222211111 1123478999999999999999999998763
No 64
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.8e-40 Score=348.01 Aligned_cols=260 Identities=22% Similarity=0.288 Sum_probs=203.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+.+ +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC-CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 57999999999999999999764 68999999998665433 23467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++ ++.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 5555554432 3489999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC-----
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP----- 731 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 731 (796)
........||+.|+|||++.+.. ++.++||||+||++|||++|+.|+..... .......+..........
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND----VDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS----HHHHHHHHHHHHCCCCTTTCTTG
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC----HHHHHHHHHHHhCCCChhhhhhh
Confidence 44455567899999999987765 79999999999999999999988542111 001111111111100000
Q ss_pred ----------------ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 732 ----------------PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 732 ----------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............+.+++.+||+.||++|||++|+++|-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 00000111234577999999999999999999999873
No 65
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.5e-41 Score=356.49 Aligned_cols=267 Identities=28% Similarity=0.466 Sum_probs=189.4
Q ss_pred CCCCcc--CCceeeCCC---CCeEEEeCCCCCccc--cccccccCCCCCCcEEeccC-CcccccCCcCccCCCCCcEeec
Q 003780 57 SSDHCK--LDGVTCNTA---RSIIEINLPEKKLKG--ELSQFNFSCFPGLESLSLRF-NYLFGSIPSQVGALSKLRYLDF 128 (796)
Q Consensus 57 ~~~~C~--w~gv~C~~~---~~v~~l~l~~~~l~~--~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L 128 (796)
+++||. |.||+|+.. ++|+.|+|+++++.| .++. .|..+++|++|+|++ |.+.+.+|..|+++++|++|+|
T Consensus 30 ~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~L 108 (313)
T 1ogq_A 30 TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYI 108 (313)
T ss_dssp TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEE
T ss_pred CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEEC
Confidence 568998 999999864 678888888777777 5554 467777777777774 7777777777777777777777
Q ss_pred ccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCC-CccEEEcccccccC
Q 003780 129 SFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLN-NLLILSLDSNKLSG 207 (796)
Q Consensus 129 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 207 (796)
++|.+++.+|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..+..++ +|++|+|++|++++
T Consensus 109 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~ 188 (313)
T 1ogq_A 109 THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188 (313)
T ss_dssp EEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE
T ss_pred cCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec
Confidence 77777767777777777777777777777777777777777777777777777766777777766 67777777777776
Q ss_pred cchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCcccccc
Q 003780 208 MLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTR 287 (796)
Q Consensus 208 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 287 (796)
.+|..+..++ |++|++++|++++..|..+..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 6676666665 77777777777666666666677777777777777655544 566666677777777766666666666
Q ss_pred ccccccccccCccccCccccccccccccceecccccc-ccc
Q 003780 288 LSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNK-LSG 327 (796)
Q Consensus 288 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~ 327 (796)
+++|++|+|++|+++|.+|.. ..+++|+.|++++|. +.|
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred CcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 666666666666666666654 566666666666665 443
No 66
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.3e-40 Score=345.63 Aligned_cols=256 Identities=27% Similarity=0.476 Sum_probs=196.1
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|... |+.||||++....... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357999999999999999999875 8999999987654332 22346789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC--------CCcEEEeee
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS--------KLEAFVADF 648 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~--------~~~~kl~Df 648 (796)
|||+++++|.+++... .+++..+..++.|+++||+|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999999998643 4899999999999999999999992222999999999999986 678999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
|+++...... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ............
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~ 230 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--------GLAVAYGVAMNK 230 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHTSC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHhhhcCC
Confidence 9998665432 223568999999999999899999999999999999999999987321 122222222222
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
....... .....+.+++.+|++.||++|||+.|++++|++
T Consensus 231 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 231 LALPIPS---TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCCc---ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 2222211 122347899999999999999999999999975
No 67
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.8e-40 Score=372.31 Aligned_cols=266 Identities=25% Similarity=0.431 Sum_probs=216.1
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..++++.||||+++..... .+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc----HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 45689999999999999999999888999999999865432 468999999999999999999999986 6678999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.++++... ...+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999997542 23478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....+++.|+|||++....++.++|||||||++|||+| |+.||.... ...... .+......+..
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~-~i~~~~~~~~~ 407 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIR-ALERGYRMPRP 407 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHH-HHHHTCCCCCC
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHH-HHHcCCCCCCC
Confidence 2111 122346778999999998899999999999999999999 999987321 111121 22222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEI 783 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 783 (796)
. .....+.+++.+||+.||++|||+++|++.|+.........|.+.
T Consensus 408 ~---~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~~~~ 453 (454)
T 1qcf_A 408 E---NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYEEI 453 (454)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSSBCC
T ss_pred C---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccccccC
Confidence 1 122347899999999999999999999999999887776666654
No 68
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=359.08 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=206.7
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|+++++.++||||+++++++..++..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57999999999999999999754 68999999998765444444578899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999998643 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCccCcccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 658 SSNRTIVAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .................+ .
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~p-~ 241 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-----TSSKEIVHTFETTVVTYP-S 241 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT-----SCHHHHHHHHHHCCCCCC-T
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhhcccCCC-C
Confidence 33345679999999999874 4588999999999999999999999974321 111122222222222111 1
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPT-MQRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 768 (796)
.....+.+++.+||+.||++||+ ++++.++
T Consensus 242 ----~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 242 ----AWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ----cCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 11234789999999999999998 7777654
No 69
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.1e-41 Score=370.14 Aligned_cols=261 Identities=23% Similarity=0.326 Sum_probs=210.0
Q ss_pred HHHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 492 EDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 492 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
.++....++|++.+.||+|+||+||+|+.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455689999999999999999999765 6899999999764433322234688999999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
+..++||||+++|+|.+++++. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999754 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CccccccccCccCccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 651 ARLLDSDSS-NRTIVAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 651 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
++....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......++
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------hhhHHHHHH
Confidence 987654332 223567999999999987655 7889999999999999999999997321 122222222
Q ss_pred cCC--CCCccchhhHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHh
Q 003780 726 DSR--LSPPVDRMVMQDIVLVTTVALACLHSKPKF--RPTMQRVCQEFL 770 (796)
Q Consensus 726 ~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~ 770 (796)
... ...+... .....+.+++.+||+.+|++ ||+++||++|-.
T Consensus 287 ~~~~~~~~p~~~---~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 287 NHKNSLTFPDDN---DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp THHHHCCCCTTC---CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred hccccccCCCcc---cccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 211 1111100 11234778999999999999 999999999854
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-40 Score=362.89 Aligned_cols=256 Identities=28% Similarity=0.437 Sum_probs=197.5
Q ss_pred hcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|+.+ ++..||||+++..... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357999999999999999999764 5778999999765432 2346899999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999998643 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSNR---TIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
........ ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .. .....+....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--------~~-~~~~~i~~~~ 267 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--------NQ-DVIKAVDEGY 267 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--------HH-HHHHHHHTTE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HH-HHHHHHHcCC
Confidence 65432211 12235678999999999999999999999999999998 999986321 11 1222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..+.. ......+.+++.+||+.||++||+++|+++.|+..
T Consensus 268 ~~~~~---~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 268 RLPPP---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ECCCC---TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCC---ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 11111 12233478999999999999999999999999765
No 71
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.9e-40 Score=355.98 Aligned_cols=250 Identities=19% Similarity=0.254 Sum_probs=209.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999764 7999999999766544434456789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998653 389999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~--- 259 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSGKVRFPS--- 259 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCT---
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcCCCCCCC---
Confidence 2 234579999999999999999999999999999999999999987321 22233333333322111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPT-----MQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 769 (796)
.....+.+++.+||+.||++||+ ++|+++|-
T Consensus 260 --~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 260 --HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp --TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred --CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 11234789999999999999998 88888764
No 72
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=347.88 Aligned_cols=256 Identities=25% Similarity=0.418 Sum_probs=207.8
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|+.++++.||+|++...... .+++.+|++++++++||||+++++++..++..++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 35689999999999999999999888999999999876544 25688999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999997632 3489999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ..... ..+.........
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--------~~~~~-~~~~~~~~~~~~ 243 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--------NSETA-EHIAQGLRLYRP 243 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHH-HHHHTTCCCCCC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--------hhHHH-HHHhcccCCCCC
Confidence 211 1122346778999999998899999999999999999998 999987322 11112 222222222111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
... ...+.+++.+||+.||++|||++|++++|++..
T Consensus 244 ~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 244 HLA---SEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp TTC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcC---CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111 234779999999999999999999999998753
No 73
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.1e-40 Score=350.89 Aligned_cols=274 Identities=18% Similarity=0.192 Sum_probs=215.7
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... +.+.+|+.+++++ +|+|++++++++......++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 46799999999999999999974 57999999998654432 3578899999999 79999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc-----EEEeeecc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE-----AFVADFGT 650 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~ 650 (796)
||||+ +++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 999999998643 2489999999999999999999999 9999999999999987776 99999999
Q ss_pred ccccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 651 ARLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 651 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~ 232 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA-----TNKQKYER 232 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC-----CHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc-----ccHHHHHH
Confidence 987654322 123456999999999999999999999999999999999999999753221 11111111
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHH
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQ 787 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~ 787 (796)
....................+.+++.+|++.||++||++++|++.|++..........+..+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 1111111111111112234588999999999999999999999999887654444444444443
No 74
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-40 Score=355.10 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=203.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999999755 79999999997554332 235688999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999987543 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 657 DS--SNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 657 ~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
.. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... ................
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~ 230 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-------CQEYSDWKEKKTYLNP 230 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-------SHHHHHHHTTCTTSTT
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHHHhcccccCCc
Confidence 22 22234579999999999987765 67899999999999999999999743211 1111111122111111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......+.+++.+||+.||++|||++|++++-.
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 1112234778999999999999999999998853
No 75
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=361.54 Aligned_cols=260 Identities=24% Similarity=0.358 Sum_probs=212.2
Q ss_pred hcCCccceeeecccceeEEEEEcc--------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++|.+.+.||+|+||.||+|+.. .++.||||++...... ...+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCH--HHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 468999999999999999999742 3468999999766433 2356889999999999 8999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
.++..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999986532 23589999999999999999999999 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~---- 298 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---- 298 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----
Confidence 999999999999999987654322 2233457889999999999999999999999999999999 999986321
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.......+.......... .....+.+++.+||+.||++|||++|++++|++...
T Consensus 299 -----~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 299 -----VEELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp -----HHHHHHHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 112222222222222211 122347899999999999999999999999987653
No 76
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=368.37 Aligned_cols=262 Identities=24% Similarity=0.317 Sum_probs=210.0
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
+++.....++|++.+.||+|+||.||+|+.+ +|+.||+|++.+.........+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 4444556789999999999999999999764 799999999976543333334568899999999999999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
++..++||||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999998643 2489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC-ccccccccCccCccccc-------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 650 TARLLDSDSSN-RTIVAGTYGYIAPELAY-------TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 650 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||.... .....
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~ 279 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--------TAETY 279 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC--------HHHHH
Confidence 99876544332 23457999999999987 3568999999999999999999999997321 12222
Q ss_pred HHhhcC--CCC-CccchhhHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHHH
Q 003780 722 IDVLDS--RLS-PPVDRMVMQDIVLVTTVALACLHSKPKFR---PTMQRVCQEF 769 (796)
Q Consensus 722 ~~~~~~--~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~L 769 (796)
..++.. ... +... ......+.+++.+||+ +|++| |+++|+++|-
T Consensus 280 ~~i~~~~~~~~~p~~~---~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 280 GKIVHYKEHLSLPLVD---EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp HHHHTHHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred HHHHhcccCcCCCccc---cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 222211 111 1110 1112347789999999 99998 6999998874
No 77
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-40 Score=374.47 Aligned_cols=340 Identities=22% Similarity=0.259 Sum_probs=285.3
Q ss_pred CCccCCc--eeeCCC---------CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccC-CcCccCCCCCcEe
Q 003780 59 DHCKLDG--VTCNTA---------RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSI-PSQVGALSKLRYL 126 (796)
Q Consensus 59 ~~C~w~g--v~C~~~---------~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L 126 (796)
..|.|.+ |.|+.. .+++.|+|+++.+++..+ ..|+.+++|++|+|++|.+.+.+ +..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 4466655 778643 468999999999987544 46899999999999999998554 6689999999999
Q ss_pred ecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchh--hhccCccceeeccccccCCCCCcc-ccCCCCccEEEcccc
Q 003780 127 DFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSS--LCQLTKLITMALSRNGLHGPIPSA-IGDLNNLLILSLDSN 203 (796)
Q Consensus 127 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N 203 (796)
+|++|.+++..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. |.++++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999866655 999999999999999999988876 899999999999999
Q ss_pred cccCcchhhhcCC--CCccccccCCccccccCCCc--------ccccCccceEEeccccccccCCccccC----------
Q 003780 204 KLSGMLHQELGKL--KNLVALNVGGNKLMGPIPST--------LFRLTNLTYLYLHSNHLNGSIPPEIGN---------- 263 (796)
Q Consensus 204 ~l~~~~~~~~~~l--~~L~~L~l~~N~l~~~~~~~--------l~~l~~L~~L~L~~N~l~~~~p~~~~~---------- 263 (796)
++++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|+|++|++++.+|..+..
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 9999999888776 67888888888887655433 235577888888888776554433321
Q ss_pred -----------------------------CcccceeecccccccccCccccccccccccccccCccccCccccccccccc
Q 003780 264 -----------------------------MTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLIS 314 (796)
Q Consensus 264 -----------------------------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 314 (796)
.++|+.|++++|++++..|..+..+++|++|+|++|.+++..|..|.++++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 257899999999999888999999999999999999999888889999999
Q ss_pred cceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCcc---ccccccccccC
Q 003780 315 LKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPF---LYHRFPLDLSY 390 (796)
Q Consensus 315 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~---~~~~~~l~l~~ 390 (796)
|++|+|++|++++..|..|..+++|+.|+|++|++++..|..+ .+++|++|+|++|++++..+.. +.++..|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 9999999999988888899999999999999999998878776 4789999999999998655433 34566899999
Q ss_pred CCCcccCCC
Q 003780 391 NDLEGEIPD 399 (796)
Q Consensus 391 N~l~~~~p~ 399 (796)
|.+++..|.
T Consensus 405 N~l~~~~~~ 413 (455)
T 3v47_A 405 NPWDCSCPR 413 (455)
T ss_dssp SCBCCCTTT
T ss_pred CCcccCCCc
Confidence 999998884
No 78
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.2e-40 Score=349.08 Aligned_cols=266 Identities=23% Similarity=0.361 Sum_probs=206.1
Q ss_pred hcCCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-- 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-- 570 (796)
.++|++.+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH---HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46899999999999999999973 3689999999976543 2346889999999999999999999999654
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 45899999999999999998653 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc-------CCCCCchhhhH
Q 003780 651 ARLLDSDSS---NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSS-------LSSPSSDQKIM 720 (796)
Q Consensus 651 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~-------~~~~~~~~~~~ 720 (796)
++....... ......++..|+|||.+.+..++.++||||||+++|||+||..|+..... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 12233477789999999999999999999999999999999999763211 00001111112
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
....+......+... .....+.+++.+||+.||++|||++|+++.|++...
T Consensus 241 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 241 LIELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCcCCCCc---CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 222222222222211 222358899999999999999999999999987643
No 79
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5e-40 Score=352.61 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=197.8
Q ss_pred hcCCccceeeecccceeEEEEEc----cCCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.++|++.+.||+|+||.||+|+. .+|+.||+|++....... ......+.+|+.++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999975 479999999998654321 1224567899999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 65444333445679999999999999899999999999999999999999997321 1222333333322211
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
. .....+.+++.+||+.||++|| ++.|+++|-
T Consensus 242 ~-----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 242 P-----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp T-----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred C-----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 1 1123477899999999999999 788998874
No 80
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=356.38 Aligned_cols=264 Identities=26% Similarity=0.387 Sum_probs=212.8
Q ss_pred HHhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
...++|++.+.||+|+||.||+|+.. +++.||+|+++..... ...+.+.+|+.++++++||||+++++++..
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 34678999999999999999999764 3589999999865432 235689999999999999999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCc---------------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYE---------------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHR 628 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 628 (796)
++..++||||+++|+|.+++..... ...+++..++.++.||++||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9999999999999999999986421 14589999999999999999999999 99999
Q ss_pred cCCCCCeEecCCCcEEEeeeccccccCCCC--CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCc
Q 003780 629 DISSNNILLNSKLEAFVADFGTARLLDSDS--SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGE 705 (796)
Q Consensus 629 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~ 705 (796)
||||+||+++.++.+||+|||+++...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999998654322 12233457889999999998899999999999999999999 999987
Q ss_pred ccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 706 LLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
... .......+.......... .....+.+++.+||+.||++||++.|++++|++.....
T Consensus 279 ~~~--------~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 279 GMA--------HEEVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TSC--------HHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCC--------hHHHHHHHhCCCcCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 321 122222222222211111 12234789999999999999999999999999876533
No 81
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.8e-40 Score=356.82 Aligned_cols=259 Identities=15% Similarity=0.174 Sum_probs=207.5
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +.+.+|+++++++ +||||+++++++..++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 46799999999999999999974 57999999998755432 3578999999999 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc-----EEEeeecc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE-----AFVADFGT 650 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~ 650 (796)
||||+ +++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 999999998642 3589999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCC-------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 651 ARLLDSDSSN-------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 651 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~-----~~~~~~~~~ 231 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-----DTLKERYQK 231 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----SSHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc-----ccHHHHHHH
Confidence 9876543221 2346799999999999999999999999999999999999999974321 111111111
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
+................. .+.+++..|++.||.+||+++++.+.|++..
T Consensus 232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 111111111111011112 6889999999999999999999999987543
No 82
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.4e-40 Score=354.53 Aligned_cols=256 Identities=24% Similarity=0.350 Sum_probs=200.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC---- 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 572 (796)
.++|++.+.||+|+||.||+|+. .+++.||||++...........+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999975 5799999999987765555556789999999999999999999999977654
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++|+|.++++... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 499999999999999998653 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 653 LLDSDSS---NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 653 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--------PVSVAYQHVREDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCCC
Confidence 7654322 1233568999999999999999999999999999999999999987321 1122222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.+.. .........+.+++.+||+.||++||++.+++++
T Consensus 237 ~~~~-~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 237 IPPS-ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CCHH-HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCcc-cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 2211 1011123457899999999999999977776655
No 83
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=359.48 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=208.2
Q ss_pred hcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|++.+.||+|+||.||+|+.. +++.||||++....... ....+.+|+.++++++||||+++++++...+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ--DELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHH--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChh--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 367999999999999999999742 47789999997544332 2457889999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcC----cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cEE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDY----EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EAF 644 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~k 644 (796)
..++||||+++|+|.+++.... ....+++..++.++.||++||+|||++ +|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999998653 224589999999999999999999999 999999999999999555 599
Q ss_pred EeeeccccccCCCC--CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHH
Q 003780 645 VADFGTARLLDSDS--SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 645 l~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (796)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .. ..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--------~~-~~ 295 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQ-EV 295 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HH-HH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--------HH-HH
Confidence 99999998653221 22334568899999999999999999999999999999998 999987321 11 22
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...+.......... .....+.+++.+||+.||++|||++|++++|+...
T Consensus 296 ~~~i~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 296 LEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 22222222211111 12234789999999999999999999999997654
No 84
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-40 Score=357.42 Aligned_cols=265 Identities=23% Similarity=0.365 Sum_probs=210.5
Q ss_pred HHhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
...++|++.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3457899999999999999999975 24678999999754322 2246889999999999 8999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcc--------------------cccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEA--------------------VVLDWTMRVNIIKCVANALSYLHHDCMPSIVHR 628 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 628 (796)
.++..++||||+++|+|.+++...... ..+++..+..++.|+++||+|||+. +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999865321 3478999999999999999999999 99999
Q ss_pred cCCCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCc
Q 003780 629 DISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGE 705 (796)
Q Consensus 629 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~ 705 (796)
||||+||+++.++.+||+|||++......... .....||+.|+|||.+.+..++.++|||||||++|+|+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543322 233457889999999998899999999999999999998 999987
Q ss_pred ccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 706 LLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
.... .......+.......... .....+.+++.+||+.||.+|||+.|++++|+......
T Consensus 277 ~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 277 GIPV--------DANFYKLIQNGFKMDQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp TCCC--------SHHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cCCc--------HHHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 4321 112222233322222211 12234788999999999999999999999998876543
No 85
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.7e-40 Score=354.28 Aligned_cols=251 Identities=23% Similarity=0.281 Sum_probs=183.0
Q ss_pred eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEeeccC
Q 003780 505 YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
+.||+|+||.||+|..+ +++.||||++.... ...+.+|+.+++.+. ||||+++++++.++...++||||+++
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 78999999999999764 68999999996432 346788999999997 99999999999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cEEEeeeccccccCCCCC
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EAFVADFGTARLLDSDSS 659 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~ 659 (796)
|+|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 91 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 91 GELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 99999998653 489999999999999999999999 999999999999998765 899999999987665544
Q ss_pred CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||......... .........+........ ......
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~-~~~~~~ 242 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFE-GEAWKN 242 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCC-SHHHHT
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCC-cccccC
Confidence 455567899999999999999999999999999999999999999753321111 111122222222222211 111122
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....+.+++.+||+.||++|||++|++++-
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h~ 272 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNE 272 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTTCG
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhcCh
Confidence 334588999999999999999999999874
No 86
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7e-40 Score=349.70 Aligned_cols=259 Identities=25% Similarity=0.398 Sum_probs=210.7
Q ss_pred hcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|++++++++||||+++++++..++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 56899999999999999999964 34588999999765432 23568899999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc---------------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE---------------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDI 630 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl 630 (796)
..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999986532 23488999999999999999999999 9999999
Q ss_pred CCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccc
Q 003780 631 SSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELL 707 (796)
Q Consensus 631 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~ 707 (796)
||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876543222 223347788999999998889999999999999999999 99998732
Q ss_pred ccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 708 SSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.. ......+.......... .....+.+++.+||+.||++||+++|++++|++..
T Consensus 257 ~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 257 PP---------ERLFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp CG---------GGHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CH---------HHHHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 21 11222222222222111 12234789999999999999999999999998753
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-40 Score=357.35 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=207.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +|+.||+|++......+ ...+.+|++++++++||||+++++++.+++..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD---KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH---HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh---HHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999754 78999999997654332 34788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC--CCcEEEeeecccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS--KLEAFVADFGTARLL 654 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~ 654 (796)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999987542 3489999999999999999999999 9999999999999974 477999999999876
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+..........
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKRCDWEFDED 272 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHCCCCCCSS
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCcc
Confidence 5432 2334569999999999999999999999999999999999999987321 112222222222111110
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
........+.+++.+||+.||++|||++|++++-
T Consensus 273 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 273 -AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 0111223478999999999999999999999984
No 88
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.6e-40 Score=350.26 Aligned_cols=261 Identities=20% Similarity=0.309 Sum_probs=191.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +|+.||+|++....... ..+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG--TPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTC--SCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc--cHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 468999999999999999999765 68999999997654322 235788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcC---cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 577 YKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
|||++ |+|.+++.... ....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 59999887542 123488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC-----
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS----- 727 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 727 (796)
............||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.+....
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCTTT
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCChhH
Confidence 7544444445578999999999876 4689999999999999999999999974221 0001111111100
Q ss_pred ------------CCC----Cccch-----hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 728 ------------RLS----PPVDR-----MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 728 ------------~~~----~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... ..... ........+.+++.+||+.||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 295 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCCh
Confidence 000 00000 0001123588999999999999999999999873
No 89
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-40 Score=366.45 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=209.3
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357999999999999999999765 7999999999866544333456889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999997543 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. .....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+... .......+.......+.
T Consensus 169 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~p~-- 237 (476)
T 2y94_A 169 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--------VPTLFKKICDGIFYTPQ-- 237 (476)
T ss_dssp TC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------SHHHHHHHHTTCCCCCT--
T ss_pred cc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhcCCcCCCc--
Confidence 32 2344579999999999988765 689999999999999999999997422 11222223322222111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+||+.||++|||++|+++|-
T Consensus 238 ---~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp 268 (476)
T 2y94_A 238 ---YLNPSVISLLKHMLQVDPMKRATIKDIREHE 268 (476)
T ss_dssp ---TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred ---cCCHHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence 1123477899999999999999999999873
No 90
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=354.67 Aligned_cols=254 Identities=22% Similarity=0.365 Sum_probs=203.1
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC--CceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH--RNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||++...+++.||||++....... ...+.+.+|++++++++| |||+++++++..++..++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccch-HHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 45799999999999999999998889999999997665433 335688999999999986 999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||| +.+|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 56889999998653 488999999999999999999999 999999999999997 5789999999998765
Q ss_pred CCCC--CccccccccCccCcccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 656 SDSS--NRTIVAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 656 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-------hHHHHHH
Confidence 4322 2234569999999999865 678899999999999999999999997321 1222333
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..++............ ..+.+++.+||+.||++|||+.|++++..
T Consensus 232 ~~~~~~~~~~~~~~~~---~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HHHCTTSCCCCCCCSC---HHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHhcCCcccCCcccCC---HHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 4444433333222221 24778999999999999999999999854
No 91
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-40 Score=370.75 Aligned_cols=253 Identities=22% Similarity=0.275 Sum_probs=199.9
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||++.............+.+|+.++++++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999975 47999999999865433333346788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||+++|+|.+++.+.. .+++..+..++.||++||+|||+ . +|+||||||+|||++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997653 48999999999999999999998 7 99999999999999999999999999998655
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+.
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~-- 370 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEEIRFPR-- 370 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCT--
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCCCCCCc--
Confidence 44444455779999999999999999999999999999999999999986321 12222233333322111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
.....+.+++.+||+.||++|| +++|+++|-
T Consensus 371 ---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 371 ---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred ---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 1123477999999999999999 999999874
No 92
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=344.58 Aligned_cols=254 Identities=24% Similarity=0.394 Sum_probs=187.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999975 57999999999765544433456889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999998642 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...... ............ ..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~--~~-- 232 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVVLADYE--MP-- 232 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCC--CC--
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHhhcccC--Cc--
Confidence 433334456899999999999888999999999999999999999998743211 011111111111 11
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.+++.+||+.||++|||++|++++-
T Consensus 233 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 264 (278)
T 3cok_A 233 -SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHP 264 (278)
T ss_dssp -TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred -cccCHHHHHHHHHHcccCHhhCCCHHHHhcCc
Confidence 11123477999999999999999999999863
No 93
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-39 Score=342.05 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=208.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +|+.||+|++........ ..+.+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHH-HHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 578999999999999999999754 689999999977654432 356789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEeeeccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVADFGTARL 653 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a~~ 653 (796)
|||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999999887653 389999999999999999999999 9999999999999987655 99999999987
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
..... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .................
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~ 228 (284)
T 3kk8_A 158 VNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIKAGAYDYPS 228 (284)
T ss_dssp CCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCCT
T ss_pred cccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--------hhHHHHHHHhccccCCc
Confidence 65432 2334569999999999999999999999999999999999999986321 11222222222221111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. .......+.+++.+|++.||++|||++|++++-
T Consensus 229 ~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 229 PE-WDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp TT-TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred hh-hcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 10 111223478999999999999999999999974
No 94
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-39 Score=342.04 Aligned_cols=252 Identities=30% Similarity=0.448 Sum_probs=205.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +++.||+|++...........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 468999999999999999999654 6789999999766544444456789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999997653 389999999999999999999999 999999999999999999999999999865433
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+ .
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~--~- 228 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEFTFP--D- 228 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCC--T-
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhCCCCCC--C-
Confidence 2 2234568999999999999999999999999999999999999987321 1112222222211111 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.....+.+++.+||+.||++|||++|+++|-.
T Consensus 229 --~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 229 --FVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp --TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred --cCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 11234778999999999999999999999854
No 95
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6e-40 Score=343.25 Aligned_cols=250 Identities=22% Similarity=0.353 Sum_probs=183.3
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 478999999998766554444568899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+ ++++.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 678888877543 389999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. .....||+.|+|||.+.+..+ +.++||||+||++|+|++|+.||.... ...............+ .
T Consensus 166 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~-~-- 233 (275)
T 2eue_A 166 NF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGVYTLP-K-- 233 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCC-T--
T ss_pred cc-ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCC-c--
Confidence 22 234569999999999987765 689999999999999999999987321 1122222222222111 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+||+.||++|||++|++++-
T Consensus 234 --~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 234 --FLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred --cCCHHHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 1123477899999999999999999999874
No 96
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.3e-40 Score=355.21 Aligned_cols=255 Identities=23% Similarity=0.284 Sum_probs=197.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||+||+++.+ +++.||+|++...... .+.+.+|+.++++++||||+++++++..++..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 468999999999999999999765 7999999999765433 24688999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc--EEEeeecccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE--AFVADFGTARLL 654 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~~ 654 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999997643 389999999999999999999999 9999999999999987765 999999999754
Q ss_pred CCCCCCccccccccCccCccccccCCcCcc-hhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEK-CDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
.... ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...... .................+.
T Consensus 169 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 169 VLHS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP----RDYRKTIQRILSVKYSIPD 243 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C----CCHHHHHHHHHTTCCCCCT
T ss_pred cccC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhcCCCCCCC
Confidence 3322 2234569999999999988877655 89999999999999999999743321 1112222333333222211
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. .....+.+++.+||+.||++|||+.|+++|-.
T Consensus 244 ~~---~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 244 DI---RISPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp TS---CCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred cC---CCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 11 11234779999999999999999999999843
No 97
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=346.52 Aligned_cols=249 Identities=22% Similarity=0.226 Sum_probs=196.3
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||+||+|+.+ +|+.||||++......... ...+..|+..+.++ +||||+++++++.+++..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 357999999999999999999765 7999999998765544333 23445566555555 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 668988887643 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ...........+..
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~~~~~~~~~-- 273 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GWQQLRQGYLPPEF-- 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HHHHHTTTCCCHHH--
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHhccCCCccc--
Confidence 432 2334569999999999876 68999999999999999999977654211 11112222221111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.......+.+++.+||+.||++|||++|++++-
T Consensus 274 -~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 274 -TAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp -HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred -ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 112234588999999999999999999999864
No 98
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1e-39 Score=344.07 Aligned_cols=261 Identities=26% Similarity=0.419 Sum_probs=198.5
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||+||+|+.. ..||+|++....... ...+.+.+|++++++++||||+++++++ .....++|
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP-QQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 3568999999999999999999864 359999997665443 3356899999999999999999999965 45668999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999997543 3489999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 657 D--SSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 657 ~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
. ........||+.|+|||.+. +..++.++||||+|+++|+|++|+.||..... ..............+
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 245 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-------RDQIIEMVGRGSLSP 245 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-------HHHHHHHHHHTSCCC
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-------HHHHHHHhcccccCc
Confidence 2 12223456899999999986 56788899999999999999999999974221 111111122222222
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
............+.+++.+||+.||++|||++|+++.|++..
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 222212223345889999999999999999999999998864
No 99
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-39 Score=340.03 Aligned_cols=254 Identities=19% Similarity=0.269 Sum_probs=207.5
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--ceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 575 (796)
.++|++.+.||+|+||.||+|+.+ ++.||||++........ ..+.+.+|+.++++++||||+++++++..+ +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHH-HHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHH-HHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 357999999999999999999885 89999999987654332 346799999999999999999999999887 78899
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS--IVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
||||+++|+|.+++++.. ...+++..+..++.|+++||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999998653 23589999999999999999999998 7 99999999999999999999999988764
Q ss_pred cCCCCCCccccccccCccCccccccCCcCc---chhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTE---KCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
... ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||.... ..............
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~ 229 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--------NMEIGMKVALEGLR 229 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--------HHHHHHHHHHSCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--------hHHHHHHHHhcCCC
Confidence 322 2245899999999988765554 7999999999999999999987321 12222233333333
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
+.... .....+.+++.+||+.||++|||++|+++.|++..
T Consensus 230 ~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 230 PTIPP---GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 22222 12234789999999999999999999999998764
No 100
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=355.06 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=192.1
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|+.+ +++.||||++..... .+.+.+|++++++++||||+++++++..++..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 4568999999999999999999765 688999999976532 2468899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~ 652 (796)
||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999997643 389999999999999999999999 9999999999999975 8899999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........+........
T Consensus 200 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 200 IVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-------GDQFMFRRILNCEYYFI 271 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-------CHHHHHHHHHTTCCCCC
T ss_pred ccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-------ccHHHHHHHHhCCCccC
Confidence 765432 2334569999999999999999999999999999999999999986321 11112223333222111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .........+.+++.+||+.||++|||+.|++++-
T Consensus 272 ~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 272 S-PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp T-TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred C-chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1 00112233578999999999999999999999974
No 101
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.3e-40 Score=349.38 Aligned_cols=263 Identities=24% Similarity=0.363 Sum_probs=212.6
Q ss_pred HhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 569 (796)
..++|++.+.||+|+||.||+|+. .+++.||+|++....... ..+.+.+|+++++++ +||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT--EREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH--HHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 346899999999999999999974 357899999998654332 246789999999999 89999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCc---------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYE---------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
++..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 9999999999999999999986532 12489999999999999999999999 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCC
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLS 711 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~ 711 (796)
|+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.....
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-- 253 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-- 253 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS--
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc--
Confidence 99999999999999999876544322 223457788999999998899999999999999999999 9999874321
Q ss_pred CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 712 SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
. ......+.......... .....+.+++.+|++.||++|||++|++++|++....
T Consensus 254 --~----~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 254 --D----SKFYKMIKEGFRMLSPE---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp --S----HHHHHHHHHTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --h----hHHHHHhccCCCCCCcc---cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1 11122222222211111 1123478999999999999999999999999876543
No 102
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.7e-40 Score=353.94 Aligned_cols=265 Identities=25% Similarity=0.327 Sum_probs=207.6
Q ss_pred HHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccch--hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETE--ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
+....++|++.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999975 57889999999765321 122356899999999999999999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcC-------------------------------------cccccCHHHHHHHHHHHHHH
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDY-------------------------------------EAVVLDWTMRVNIIKCVANA 613 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~ia~~ 613 (796)
+..++||||+++|+|.+++.... ....+++..+..++.|+++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985211 01224677788999999999
Q ss_pred HHHHhhcCCCCeEEecCCCCCeEecCCC--cEEEeeeccccccCCCCC----CccccccccCccCcccccc--CCcCcch
Q 003780 614 LSYLHHDCMPSIVHRDISSNNILLNSKL--EAFVADFGTARLLDSDSS----NRTIVAGTYGYIAPELAYT--MVVTEKC 685 (796)
Q Consensus 614 L~~LH~~~~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~ 685 (796)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986543221 2234569999999999875 6788999
Q ss_pred hHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 003780 686 DVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRV 765 (796)
Q Consensus 686 DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 765 (796)
|||||||++|||++|+.||... .................... .......+.+++.+||+.||++||++.|+
T Consensus 258 DiwslG~il~el~~g~~pf~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGV--------NDADTISQVLNKKLCFENPN-YNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCTTSGG-GGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCC--------ChHHHHHHHHhcccccCCcc-cccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999999999998732 12233334444443322211 11223458899999999999999999999
Q ss_pred HHHHh
Q 003780 766 CQEFL 770 (796)
Q Consensus 766 l~~L~ 770 (796)
+++-.
T Consensus 329 l~hp~ 333 (345)
T 3hko_A 329 LQHPW 333 (345)
T ss_dssp HHSHH
T ss_pred hcChh
Confidence 99743
No 103
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-39 Score=346.78 Aligned_cols=271 Identities=19% Similarity=0.277 Sum_probs=204.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999975 57999999999865444444467889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999987532 234588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...............+....
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~ 261 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCDYPPLPSD 261 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHHTTCSCCCCTT
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhhcccCCCCccc
Confidence 544334445689999999999999999999999999999999999999863211 11111111111111111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCcc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPF 780 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 780 (796)
.....+.+++.+||+.||++|||++|+++.|++.....+.+-
T Consensus 262 ---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 262 ---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 112347899999999999999999999999999877665443
No 104
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.8e-40 Score=350.14 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=194.0
Q ss_pred HHhcCCccceeeecccceeEEEEEccCC----cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLPNG----KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
...++|++.+.||+|+||.||+|+.... ..||||++........ ..+.+.+|++++++++||||+++++++....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS-DIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CH-HHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH-HHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3456899999999999999999986543 2799999976543332 2578999999999999999999999998776
Q ss_pred ee------eEEEeeccCCcHHHHHhhcCc---ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 572 CM------FLIYKYMKRGSLFCFLRNDYE---AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 572 ~~------~lV~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
.. ++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 999999999999999875421 22589999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhh
Q 003780 643 AFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (796)
+||+|||+++........ .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~ 247 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--------AE 247 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GG
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--------HH
Confidence 999999999876443221 223446788999999999999999999999999999999 9999874221 11
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
............... .....+.+++.+||+.||++|||+.|+++.|++..
T Consensus 248 ~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 248 IYNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 222222222111111 12234789999999999999999999999998653
No 105
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.2e-40 Score=367.05 Aligned_cols=266 Identities=26% Similarity=0.416 Sum_probs=211.0
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..+++..||||+++..... .+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 34678999999999999999999888888999999865432 3578999999999999999999999876 678999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999997532 23488999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... ..... ..+......+..
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--------~~~~~-~~i~~~~~~~~~ 403 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVL-DQVERGYRMPCP 403 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHH-HHHHTTCCCCCC
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHcCCCCCCC
Confidence 3221 223346788999999998899999999999999999999 999986321 11122 222222222211
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEI 783 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 783 (796)
. .....+.+++.+||+.||++|||++++++.|+.......++|.+.
T Consensus 404 ~---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~ 449 (452)
T 1fmk_A 404 P---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449 (452)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCS
T ss_pred C---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccccc
Confidence 1 122347899999999999999999999999999877766666543
No 106
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.3e-39 Score=342.40 Aligned_cols=253 Identities=22% Similarity=0.371 Sum_probs=211.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999765 6889999999876544444457889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999987643 489999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~--- 236 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNEYSIPK--- 236 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTTCCCCCT---
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhhccCCCcc---
Confidence 4444455679999999999999889999999999999999999999987321 11122222222221111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+|++.||++|||++|++++-
T Consensus 237 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 237 --HINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred --ccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1123477899999999999999999999874
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=346.51 Aligned_cols=254 Identities=27% Similarity=0.444 Sum_probs=198.7
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
++|++.+.||+|+||.||+|+.. ++.||+|++.... ..+.+.+|++++++++||||+++++++. +..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES-----ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT-----HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh-----HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEE
Confidence 57899999999999999999875 7899999986432 2457899999999999999999999886 34789999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc-EEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE-AFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~ 657 (796)
|+++|+|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999987655455789999999999999999999933239999999999999998886 799999999765432
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... . ........ .....+....
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~-~~~~~~~~-~~~~~~~~~~-- 227 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----P-AFRIMWAV-HNGTRPPLIK-- 227 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS-----S-HHHHHHHH-HTTCCCCCBT--
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc-----c-HHHHHHHH-hcCCCCCccc--
Confidence 2234589999999999999999999999999999999999999874221 1 11111111 1111221111
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.....+.+++.+||+.||++|||++|+++.|+...
T Consensus 228 -~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 228 -NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred -ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 12234789999999999999999999999998754
No 108
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-39 Score=344.90 Aligned_cols=264 Identities=22% Similarity=0.300 Sum_probs=204.9
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|... +++.||+|++......+....+.+.+|+.++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999754 789999999987765555556789999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999998653 389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC-CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 656 SDS-SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 656 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+....... .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~~~~~~~~~~~~~-~ 255 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---------LSVMGAHINQAIPRP-S 255 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---------HHHHHHHHHSCCCCG-G
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---------HHHHHHHhccCCCCc-c
Confidence 432 12234568999999999999999999999999999999999999987321 112222222222211 1
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhhcCccc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRP-TMQRVCQEFLTCKIAL 776 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 776 (796)
.........+.+++.+||+.||++|| +++++++.|+......
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 11112223477899999999999999 9999999998875543
No 109
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.6e-40 Score=340.03 Aligned_cols=255 Identities=25% Similarity=0.414 Sum_probs=209.8
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++..++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 3578999999999999999999888999999999876543 257899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997643 3478999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 S-SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... .......+ ..........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i-~~~~~~~~~~ 228 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDI-STGFRLYKPR 228 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHH-HTTCCCCCCT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHH-hcCCcCCCCc
Confidence 1 11122346788999999998889999999999999999999 899987321 11122222 2222111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.....+.+++.+|++.||++||+++|++++|++..
T Consensus 229 ---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 229 ---LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11234789999999999999999999999998764
No 110
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.9e-39 Score=347.43 Aligned_cols=256 Identities=22% Similarity=0.314 Sum_probs=208.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++........ ...+.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999765 699999999976543321 1246789999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC----cEEEeeec
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL----EAFVADFG 649 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg 649 (796)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 488999999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
++....... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.... .............
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhccc
Confidence 998765432 2234569999999999999999999999999999999999999986321 1222222222221
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... ..........+.+++.+||+.||++|||++|++++-
T Consensus 236 ~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 236 DFD-EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp CCC-HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred ccC-hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 111 111112234578999999999999999999999874
No 111
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-39 Score=357.08 Aligned_cols=253 Identities=22% Similarity=0.363 Sum_probs=203.3
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC--CCceeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA--HRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lV 576 (796)
.+|++.+.||+|+||.||+|...+++.||||++....... ...+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccH-HHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 4699999999999999999998889999999997655432 33578999999999996 59999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|| +.+++|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+||+++ ++.+||+|||+++.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 67889999998654 478889999999999999999999 999999999999996 58999999999987654
Q ss_pred CCC--CccccccccCccCcccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 657 DSS--NRTIVAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 657 ~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~~ 279 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLHA 279 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHHHH
Confidence 322 1234569999999999865 368889999999999999999999997321 12223344
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.++........... ...+.+++.+||+.||++|||+.|++++-.
T Consensus 280 ~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 280 IIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HhCccccCCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 44444333222212 234779999999999999999999998854
No 112
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=345.84 Aligned_cols=259 Identities=25% Similarity=0.335 Sum_probs=200.0
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD-PVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 67999999999999999999765 5999999998766543 233567889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999999887543 389999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC---------
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS--------- 727 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 727 (796)
........||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||..... .............
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHHH
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhccccccccccc
Confidence 444445679999999999876 6689999999999999999999999874321 1111111111100
Q ss_pred ---------CCCCcc-----chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 728 ---------RLSPPV-----DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 728 ---------~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...... ..........+.+++.+||+.||++|||++|+++|-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 000000 000011223478999999999999999999999874
No 113
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.6e-40 Score=353.27 Aligned_cols=255 Identities=21% Similarity=0.298 Sum_probs=205.0
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..... ...+|++++.++ +||||+++++++.+++..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 4568999999999999999999754 689999999976543 234688888888 7999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC----CcEEEeeecc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK----LEAFVADFGT 650 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~ 650 (796)
+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||++..+ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999999997653 489999999999999999999999 99999999999998543 3599999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
++............+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........+......
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIGSGKFS 241 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHHHCCCC
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHccCCcc
Confidence 98776554444556799999999999888899999999999999999999999973211 1122222222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... .........+.+++.+||+.||++||+++|+++|-.
T Consensus 242 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 242 LSG-GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp CCS-TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred cCc-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 111 001112234779999999999999999999999854
No 114
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-39 Score=359.12 Aligned_cols=262 Identities=19% Similarity=0.291 Sum_probs=205.1
Q ss_pred hcCCccceeeecc--cceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 498 TEDFDIKYCIGTG--GYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
.++|++.+.||+| +||.||+|+.+ +|+.||||++....... ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh-HHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4689999999999 99999999765 79999999998765433 33567889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++..... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999986532 3489999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCC-------CCccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 655 DSDS-------SNRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 655 ~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~ 254 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ----MLLEKLNGTV 254 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT----HHHHC-----
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHhcCCC
Confidence 2211 11223468999999999987 578999999999999999999999997432210 0000000000
Q ss_pred ----cCC-----------------------C----------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 726 ----DSR-----------------------L----------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 726 ----~~~-----------------------~----------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.. . ..............+.+++.+||+.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0 000000111123458899999999999999999999987
No 115
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-39 Score=351.42 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=206.3
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|+..+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999974 579999999998765444444678999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++ |++.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 68888876432 3489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 658 SSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..................
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPALQS 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCCCCCCC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcCCCCCCC
Confidence 2356999999999884 5678999999999999999999999986321 111222222222211111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
. .....+.+++.+||+.||++|||++|++++..-..
T Consensus 276 ~---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 276 G---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred C---CCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 1 11234778999999999999999999999865443
No 116
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-39 Score=368.44 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=212.3
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999765 6999999999876544444456789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||+++|+|.+++..... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999976532 34589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.......+ .
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i~~~~~~~p-~- 414 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRVLEQAVTYP-D- 414 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHHHHCCCCCC-T-
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHHhhcccCCC-c-
Confidence 544444456799999999999999999999999999999999999999974321 1111222233333322211 1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTM-----QRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 768 (796)
.....+.+++.+||+.||++||++ +|+++|
T Consensus 415 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 415 ---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ---ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 112347789999999999999965 677665
No 117
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.1e-40 Score=350.82 Aligned_cols=255 Identities=24% Similarity=0.414 Sum_probs=199.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcE----EEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKV----VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.++|++.+.||+|+||+||+|+.. +++. ||+|.+...... ...+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 357999999999999999999753 4444 588887654322 22468999999999999999999999998754
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 779999999999999998643 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 653 LLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 653 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---------~~~~~~~~~~~ 236 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA---------SEISSILEKGE 236 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG---------GGHHHHHHTTC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH---------HHHHHHHHcCC
Confidence 76544322 223346789999999999999999999999999999999 9999874221 11222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
...... .....+.+++.+||+.||++||++.|++++|+..
T Consensus 237 ~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 237 RLPQPP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp CCCCCT---TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred CCCCCc---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 222111 1223478899999999999999999999999764
No 118
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=354.59 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=198.7
Q ss_pred cceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 503 IKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
..+.||+|+||.||+|.. .+|+.||+|++....... .+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD---KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH---HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc---HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 357899999999999975 579999999998654332 4578999999999999999999999999999999999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe--cCCCcEEEeeeccccccCCCCC
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL--NSKLEAFVADFGTARLLDSDSS 659 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~~~ 659 (796)
+|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 170 ~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~- 243 (373)
T 2x4f_A 170 GGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243 (373)
T ss_dssp TCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-
Confidence 999999887542 3489999999999999999999999 99999999999999 567899999999998765432
Q ss_pred CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHH
Q 003780 660 NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQ 739 (796)
Q Consensus 660 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (796)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+........... ...
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~~~~~~~-~~~ 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILACRWDLEDEE-FQD 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCSCSGG-GTT
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhccCCCChhh-hcc
Confidence 2334569999999999998899999999999999999999999987321 1223333333322211111 112
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 740 DIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 740 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....+.+++.+||+.||++|||++|++++-
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~hp 344 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALKHP 344 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 234578999999999999999999999864
No 119
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.5e-39 Score=338.83 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=204.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHH----HHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTF----FNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.++|++.+.||+|+||.||+|+. .+++.||+|++.......... .+.+.+|++++++++||||+++++++..+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46899999999999999999975 579999999997654432221 267899999999999999999999997655
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEecCCCc-----EEE
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS--IVHRDISSNNILLNSKLE-----AFV 645 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~dlkp~NIll~~~~~-----~kl 645 (796)
++||||+++|+|.+++.+.. ..+++..+..++.|+++||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999999887543 3589999999999999999999998 8 999999999999988776 999
Q ss_pred eeeccccccCCCCCCccccccccCccCcccc--ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 646 ADFGTARLLDSDSSNRTIVAGTYGYIAPELA--YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
+|||+++.... ......||+.|+|||.+ ....++.++||||+||++|||++|+.||..... ........
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~ 241 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY------GKIKFINM 241 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC------CHHHHHHH
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc------cHHHHHHH
Confidence 99999975432 23345699999999998 455678899999999999999999999974321 11111222
Q ss_pred hhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 724 VLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.......+.... .....+.+++.+||+.||++|||++|+++.|++.
T Consensus 242 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 242 IREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHSCCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HhccCCCCCCCc---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 222333222222 1223478999999999999999999999999763
No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3e-39 Score=338.33 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=207.0
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ ++..||+|++....... .+.+.+|++++++++||||+++++++..++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3567999999999999999999754 57899999997654433 4578999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~ 652 (796)
||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999999987643 389999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ......||+.|+|||.+.+. ++.++||||+|+++|+|++|+.||.... ...............+
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT--------DSEVMLKIREGTFTFP 227 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 765433 23345699999999998664 8999999999999999999999987321 1222223333322222
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. ........+.+++.+|++.||++|||+.|++++-
T Consensus 228 ~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 228 EK-DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp HH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred ch-hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 11 0112234578999999999999999999999863
No 121
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.9e-39 Score=340.53 Aligned_cols=257 Identities=24% Similarity=0.360 Sum_probs=196.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
..++|++.+.||+|+||.||+|... .+..||+|++...... ...+.+.+|+.++++++||||+++++++. ++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 3468999999999999999999764 2567999998765432 23567899999999999999999999984 567
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 889999999999999997643 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 653 LLDSDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 653 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--------~~~~~~i~~~~~~ 236 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENGERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--------HHHHHHHHcCCCC
Confidence 76543221 223446788999999998899999999999999999997 9999874221 1112222221111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
... ......+.+++.+|++.||++|||+.|++++|++..
T Consensus 237 -~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 237 -PMP---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 112234789999999999999999999999998763
No 122
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-39 Score=344.91 Aligned_cols=274 Identities=15% Similarity=0.227 Sum_probs=214.1
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEE-EecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFC-LHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +.+.+|+.+++.++|++++..+.++ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 56899999999999999999975 67999999998765432 3688999999999988776666655 56678899
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~ 652 (796)
||||+ +++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 899999997533 2489999999999999999999999 99999999999999 488899999999998
Q ss_pred ccCCCCCC-------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 653 LLDSDSSN-------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 653 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||............ ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~ 235 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY-ERISEKKM 235 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH-HHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh-hhhccccc
Confidence 76544321 23456999999999999999999999999999999999999999854322111111 11111111
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHH
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQ 787 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~ 787 (796)
.. ............+.+++.+||+.||++|||++++++.|++.......++.+.-+|+
T Consensus 236 ~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 3uzp_A 236 ST----PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HS----CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGG
T ss_pred CC----chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccccc
Confidence 11 11111111223478999999999999999999999999987766666666666665
No 123
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.9e-40 Score=351.68 Aligned_cols=265 Identities=23% Similarity=0.339 Sum_probs=213.2
Q ss_pred HHHHHhcCCccceeeecccceeEEEEEcc------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeE
Q 003780 493 DIIKATEDFDIKYCIGTGGYGSVYKAQLP------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGF 566 (796)
Q Consensus 493 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 566 (796)
++....++|++.+.||+|+||.||+|..+ +++.||+|++....... ....+.+|++++++++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR--ERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH--HHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHH--HHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 44456688999999999999999999654 47889999997654332 24578999999999999999999999
Q ss_pred EEecceeeEEEeeccCCcHHHHHhhcCc-------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 567 CLHKKCMFLIYKYMKRGSLFCFLRNDYE-------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 567 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
+..++..++||||+++|+|.+++..... ...+++..+.+++.|+++||+|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 9999999999999999999999976421 13468999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCch
Q 003780 640 KLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSD 716 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~ 716 (796)
++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||....
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------- 245 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-------- 245 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--------
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC--------
Confidence 999999999999865433221 122346889999999998899999999999999999999 889986321
Q ss_pred hhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 717 QKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.................. .....+.+++.+|++.||++|||+.|++++|++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 246 NEQVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 122222222222221111 122347899999999999999999999999988643
No 124
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-39 Score=369.82 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=211.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +++.||||+++..... .+.|.+|+.++++++||||+++++++..++..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 457899999999999999999866 4889999999765432 46799999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... ...+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 99999999999998643 23488999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.+.+.........
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~---------~~~~~~~~~~~~~~~~ 441 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVYELLEKDYRMERP 441 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---------GGHHHHHHTTCCCCCC
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHcCCCCCCC
Confidence 3221 122346778999999998899999999999999999999 9999874321 1122223333222221
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
. .....+.+++.+||+.||++|||++|+++.|+....
T Consensus 442 ~---~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 442 E---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred C---CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1 122347899999999999999999999999988753
No 125
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.2e-40 Score=345.63 Aligned_cols=275 Identities=15% Similarity=0.236 Sum_probs=210.2
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEE-Eecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFC-LHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +.+.+|+++++.++|++++..++++ ...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999975 57999999987655432 3578899999999988777666665 5677889
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeeccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTA 651 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a 651 (796)
+||||+ +++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 999999997543 2489999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 652 RLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 652 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
+....... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||............ ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-----~~~ 230 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY-----ERI 230 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH-----HHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh-----hhh
Confidence 87654322 123456999999999999999999999999999999999999999854332211111 111
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQ 787 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~ 787 (796)
.......+...........+.+++.+|++.||++|||++++++.|+........++.+.-+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 4hgt_A 231 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGG
T ss_pred hcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchh
Confidence 111111111110111123588999999999999999999999999887766655565555554
No 126
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.3e-40 Score=342.53 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=208.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cceee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKCMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~ 574 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++....... ...+.+.+|++++++++||||+++++++.. +...+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 468999999999999999999764 78999999998665433 235679999999999999999999998854 56889
Q ss_pred EEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCC-----eEEecCCCCCeEecCCCcEEEeee
Q 003780 575 LIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPS-----IVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
+||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997643 234489999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
|.++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~~~ 232 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGKIREGK 232 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--------HHHHHHHHhhcc
Confidence 999876544333334568999999999998889999999999999999999999987321 111222222222
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
... ... .....+.+++.+||+.||++||+++|+++++....+
T Consensus 233 ~~~-~~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 233 FRR-IPY---RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CCC-CCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred ccc-CCc---ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 211 111 122347899999999999999999999998765443
No 127
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=387.62 Aligned_cols=354 Identities=23% Similarity=0.251 Sum_probs=201.7
Q ss_pred ccCCceeeCCCCCeEEEeCCCCCccc------------------------cccccccCCCCCCcEEeccCCcccccCCcC
Q 003780 61 CKLDGVTCNTARSIIEINLPEKKLKG------------------------ELSQFNFSCFPGLESLSLRFNYLFGSIPSQ 116 (796)
Q Consensus 61 C~w~gv~C~~~~~v~~l~l~~~~l~~------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 116 (796)
|+|+.|.+ ...+++.|+|++|.+++ .+++..|.++++|++|+|++|.+.+..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666666 44556666666665544 333444566666666666666666666666
Q ss_pred ccCCCCCcEeecccCcCCCCCCCC--CCCCCCCCEEEecCCCCCCCCc-hhhhccCccceeeccccccCCCCCccccCC-
Q 003780 117 VGALSKLRYLDFSFNNLTGSIPPE--LGSLRNLEVLNLKGNNLNGAIP-SSLCQLTKLITMALSRNGLHGPIPSAIGDL- 192 (796)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l- 192 (796)
|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 666666666666666666544443 6666666666666666655443 455666666666666665554433332211
Q ss_pred --------------------------------------------------------------------------------
Q 003780 193 -------------------------------------------------------------------------------- 192 (796)
Q Consensus 193 -------------------------------------------------------------------------------- 192 (796)
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence
Q ss_pred -------------CCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCc
Q 003780 193 -------------NNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPP 259 (796)
Q Consensus 193 -------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 259 (796)
++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 1233333333333333334444455555555555555555555555555555555555555555555
Q ss_pred cccCCcccceeecccccccccCccccccccccccccccCccccCcc------------------c---------------
Q 003780 260 EIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQI------------------P--------------- 306 (796)
Q Consensus 260 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~------------------~--------------- 306 (796)
.|.++++|+.|+|++|++++..+..|.++++|++|+|++|.+++.. |
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENR 412 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCc
Confidence 5555555555555555555555555555555555555555544210 0
Q ss_pred -------cccccccccceeccccccccc------------------------------CCCcccCCCCCCcEEEeecccc
Q 003780 307 -------ITIAGLISLKGLDLSNNKLSG------------------------------PIPPEIGKCSELRNITLRNNNL 349 (796)
Q Consensus 307 -------~~~~~l~~L~~L~Ls~N~l~~------------------------------~~~~~~~~l~~L~~L~L~~N~l 349 (796)
..+..+++|++|+|++|++++ ..+..|..+++|+.|+|++|++
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 001123334444444443332 2223466778888888888888
Q ss_pred cCCCCccc-cccccceEEecccccCCCCCccc-cccccccccCCCCcccCCCCCCCCC-ccccCCcccc
Q 003780 350 SGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFL-YHRFPLDLSYNDLEGEIPDYFRDSP-FKVYGNQGIC 415 (796)
Q Consensus 350 ~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~-~~~~~l~l~~N~l~~~~p~~~~~~~-~~~~~n~~~c 415 (796)
++..|..+ ++++|+.|+|++|++++..|..+ .++..|||++|++++.+|+.|.... ....+|+..|
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 88777766 57888888888888886555444 4566788888888888887765322 2235666665
No 128
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.7e-39 Score=348.33 Aligned_cols=253 Identities=22% Similarity=0.371 Sum_probs=211.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+++.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999765 5889999999876544444457889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999987643 489999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ...............+.
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~--- 262 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNEYSIPK--- 262 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCCT---
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhcCCCCCCc---
Confidence 4444455679999999999999889999999999999999999999987321 11122222222221111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+||+.||++||+++|++++-
T Consensus 263 --~~~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 263 --HINPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred --cCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1123477899999999999999999999873
No 129
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.7e-40 Score=359.44 Aligned_cols=275 Identities=16% Similarity=0.192 Sum_probs=206.9
Q ss_pred HhcCCccceeeecccceeEEEEEccC------CcEEEEEEeccccchhhH---H-----HHHHHHHHHHHhhcCCCceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPN------GKVVALKKLHRAETEETT---F-----FNSFQNEAHVLSKIAHRNIVK 562 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~---~-----~~~~~~E~~~l~~l~hpniv~ 562 (796)
..++|++.+.||+|+||.||+|..+. ++.||||++......... . ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999997654 478999998765422111 0 113445666778889999999
Q ss_pred EEeEEEec----ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec
Q 003780 563 LYGFCLHK----KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN 638 (796)
Q Consensus 563 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 638 (796)
+++++... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99999775 4589999999 999999998642 3489999999999999999999999 999999999999999
Q ss_pred --CCCcEEEeeeccccccCCCCCC-------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 003780 639 --SKLEAFVADFGTARLLDSDSSN-------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSS 709 (796)
Q Consensus 639 --~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~ 709 (796)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876432211 1334599999999999999999999999999999999999999984221
Q ss_pred CCCCCchhhh--------HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccc
Q 003780 710 LSSPSSDQKI--------MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFE 781 (796)
Q Consensus 710 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 781 (796)
. ..... .....++..+.. ......+.+++..|++.||++||+++++++.|+........++.
T Consensus 267 ~----~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 267 D----PKYVRDSKIRYRENIASLMDKCFPA------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp C----HHHHHHHHHHHHHCHHHHHHHHSCT------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred C----HHHHHHHHHHhhhhHHHHHHHhccc------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 1 11000 011111111110 01123478999999999999999999999998776544444444
Q ss_pred cccHHH
Q 003780 782 EISIWQ 787 (796)
Q Consensus 782 ~~~~~~ 787 (796)
...+|.
T Consensus 337 ~~~dw~ 342 (364)
T 3op5_A 337 GKLDLS 342 (364)
T ss_dssp CCCCC-
T ss_pred CccceE
Confidence 333343
No 130
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.2e-40 Score=345.07 Aligned_cols=258 Identities=26% Similarity=0.405 Sum_probs=212.4
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ +++.||+|++...... .+.+.+|++++++++||||+++++++..++..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHH----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4678999999999999999999765 5889999999765432 4678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999998643 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 656 SDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 656 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
..... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||..... ......+........
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~---------~~~~~~~~~~~~~~~ 233 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVYELLEKDYRMER 233 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---------GGHHHHHHTTCCCCC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHhccCCCCC
Confidence 43322 223456788999999998899999999999999999999 9999874221 112222222222221
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.. .....+.+++.+|++.||++|||++|+++.|+....
T Consensus 234 ~~---~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 234 PE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 11 122347899999999999999999999999987643
No 131
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-39 Score=367.95 Aligned_cols=258 Identities=22% Similarity=0.248 Sum_probs=210.2
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.............+.+|++++++++||||+++++++..++..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999764 7999999999766544333356788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999997653 23489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........+...... ...
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~i~~~~~~--~p~- 410 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVKEVPEE--YSE- 410 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHHHHHCCCC--CCT-
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHHhhccccc--CCc-
Confidence 32 233457999999999999989999999999999999999999999743221 1111111112111111 111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEF 769 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 769 (796)
.....+.+++.+||+.||++|| +++|+++|-
T Consensus 411 --~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp 446 (576)
T 2acx_A 411 --RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446 (576)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred --cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence 1123477899999999999999 789998873
No 132
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.3e-39 Score=361.44 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=205.5
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-eeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK-CMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ |+.||||+++.... .+.+.+|++++++++||||+++++++...+ ..++
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT-----SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH-----HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3467899999999999999999875 78999999976542 357899999999999999999999987765 7899
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.++++... ...+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999998653 23478999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.. .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .... ..+.........
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~-~~i~~~~~~~~p 408 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVV-PRVEKGYKMDAP 408 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--------TTHH-HHHHTTCCCCCC
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHH-HHHHcCCCCCCC
Confidence 22 122357889999999999999999999999999999998 9999874321 1111 112222222211
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
. .....+.+++.+||+.||++|||+.|+++.|+...
T Consensus 409 ~---~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 409 D---GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 12234789999999999999999999999998764
No 133
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.7e-39 Score=340.83 Aligned_cols=259 Identities=22% Similarity=0.384 Sum_probs=202.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CC-------cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NG-------KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH 569 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 569 (796)
.++|.+.+.||+|+||+||+|..+ ++ +.||+|++...... ..+.+.+|++++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN---YSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG---GHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 357999999999999999999654 23 57999998655432 24678999999999999999999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc-------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE------- 642 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~------- 642 (796)
++..++||||+++|+|.+++.+.. ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999998653 3488999999999999999999999 9999999999999998887
Q ss_pred -EEEeeeccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhH
Q 003780 643 -AFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 643 -~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 720 (796)
+||+|||.+..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|..|+.... .......
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~ 229 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQ 229 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHH
Confidence 99999999875432 233458899999999887 678999999999999999999655533111 1111111
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccc
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFE 781 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 781 (796)
.. .......... ...+.+++.+||+.||++|||++|++++|++...+...+..
T Consensus 230 ~~-~~~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 230 FY-EDRHQLPAPK-------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp HH-HTTCCCCCCS-------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred Hh-hccCCCCCCC-------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 11 1111111111 12367899999999999999999999999998766655443
No 134
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.5e-39 Score=343.44 Aligned_cols=264 Identities=22% Similarity=0.316 Sum_probs=207.1
Q ss_pred cCCccceeeecccceeEEEEE-----ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--c
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQ-----LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--K 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~-----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~ 571 (796)
+.|++.+.||+|+||.||+|+ ..+++.||+|++....... ..+.+.+|++++++++||||+++++++..+ .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch--hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 468899999999999999998 3468999999998654322 246789999999999999999999999876 6
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 6899999999999999996543 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc------CCCCCchhhhHHH
Q 003780 652 RLLDSDSS---NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSS------LSSPSSDQKIMLI 722 (796)
Q Consensus 652 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~------~~~~~~~~~~~~~ 722 (796)
........ ......||..|+|||.+.+..++.++||||+|+++|+|++|+.|+..... .............
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87765432 12334578889999999998999999999999999999999998652210 0111111222222
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..+.......... .....+.+++.+||+.||++|||++|+++.|++.
T Consensus 254 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 254 NTLKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 3333322222211 1223478999999999999999999999999764
No 135
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-39 Score=354.73 Aligned_cols=206 Identities=26% Similarity=0.321 Sum_probs=178.7
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-----CCceee
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-----HRNIVK 562 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~ 562 (796)
+++++.....++|.+.+.||+|+||+||+|+. .+++.||||++..... ..+.+..|+.+++.++ ||||++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK----YTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH----HHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh----hhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34444445678999999999999999999975 5789999999975332 2456788999999986 999999
Q ss_pred EEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---
Q 003780 563 LYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS--- 639 (796)
Q Consensus 563 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~--- 639 (796)
+++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 999999999999999999 8999999986532 3488999999999999999999999 9999999999999975
Q ss_pred ----------------------CCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHH
Q 003780 640 ----------------------KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEV 697 (796)
Q Consensus 640 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~el 697 (796)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|+|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2345689999999999999999999999999999999
Q ss_pred HhCCCCCcc
Q 003780 698 LMGRHPGEL 706 (796)
Q Consensus 698 ltg~~p~~~ 706 (796)
++|+.||..
T Consensus 253 l~g~~pf~~ 261 (360)
T 3llt_A 253 YTGSLLFRT 261 (360)
T ss_dssp HHSSCSCCC
T ss_pred HHCCCCCCC
Confidence 999999974
No 136
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.3e-39 Score=337.76 Aligned_cols=262 Identities=27% Similarity=0.409 Sum_probs=212.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999764 6889999999765444333356789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999998653 389999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .......+.......+ .
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~--~- 233 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--------HTETHRRIVNVDLKFP--P- 233 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTTCCCCC--T-
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--------HhHHHHHHhccccCCC--C-
Confidence 2 2334568999999999999999999999999999999999999987321 1112222222222111 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HhhcCccccCcc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQE--FLTCKIALVNPF 780 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~~~~~~ 780 (796)
.....+.+++.+|++.||++||+++|++++ ++.......+++
T Consensus 234 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~~ 277 (284)
T 2vgo_A 234 --FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277 (284)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCCC
T ss_pred --cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCCc
Confidence 112347789999999999999999999986 343333333333
No 137
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.1e-39 Score=346.94 Aligned_cols=260 Identities=24% Similarity=0.389 Sum_probs=208.8
Q ss_pred hcCCccceeeecccceeEEEEEc--------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL--------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 568 (796)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcH--HHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 47899999999999999999975 35778999999765432 2356789999999999 8999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
.++..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999986532 23488999999999999999999999 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSS 712 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~ 712 (796)
+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---- 264 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 264 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC----
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC----
Confidence 9999999999999999876543221 222346788999999988889999999999999999999 999986321
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
... ....+.......... .....+.+++.+||+.||.+|||++|++++|++...
T Consensus 265 ----~~~-~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 265 ----VEE-LFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ----HHH-HHHHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HHH-HHHHHhcCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111 111222111111111 122347899999999999999999999999987653
No 138
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.6e-39 Score=349.77 Aligned_cols=263 Identities=24% Similarity=0.374 Sum_probs=210.7
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccch-----hhHHHHHHHHHHHHHhhc-CCCceeeE
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETE-----ETTFFNSFQNEAHVLSKI-AHRNIVKL 563 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l-~hpniv~l 563 (796)
........++|++.+.||+|+||.||+|..+ +|+.||||++...... .....+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999865 7999999998765421 122345788999999999 79999999
Q ss_pred EeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcE
Q 003780 564 YGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 564 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
++++......++||||+++++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999997543 489999999999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCCCccccccccCccCcccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchh
Q 003780 644 FVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~ 717 (796)
||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... .
T Consensus 240 kl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--------~ 310 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--------Q 310 (365)
T ss_dssp EECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------H
T ss_pred EEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--------H
Confidence 999999998775433 2334679999999998863 357889999999999999999999986321 1
Q ss_pred hhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 KIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.......... ........+.+++.+||+.||++|||++|++++-
T Consensus 311 ~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 311 ILMLRMIMEGQYQFSSP-EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp HHHHHHHHHTCCCCCHH-HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHHHHHhCCCCCCCc-ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 22222222222221111 0111233478999999999999999999999863
No 139
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=356.32 Aligned_cols=265 Identities=22% Similarity=0.303 Sum_probs=211.7
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc--eee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK--CMF 574 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~ 574 (796)
.++|.+.+.||+|+||.||+|+.+ +|+.||||++........ .+.+.+|++++++++||||+++++++...+ ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 357999999999999999999765 599999999976543322 457789999999999999999999998765 779
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----cCCCcEEEeeecc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLEAFVADFGT 650 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~ 650 (796)
+||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998765545589999999999999999999999 99999999999999 7788899999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc--------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT--------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~~~~ 237 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMY 237 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT----TTCHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc----cchHHHHH
Confidence 98765432 2233569999999998865 56788999999999999999999999743221 11122222
Q ss_pred HhhcCCCC--------------------CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 723 DVLDSRLS--------------------PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 723 ~~~~~~~~--------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..+..... +............+.+++.+||+.||++||+++|++++++..
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 22222111 111112234556688999999999999999999999998764
No 140
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.8e-39 Score=338.59 Aligned_cols=256 Identities=23% Similarity=0.329 Sum_probs=205.2
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||+|.+........ ...+.+.+|++++++++||||+++++++..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999765 699999999976543321 1246789999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC----cEEEeeec
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL----EAFVADFG 649 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg 649 (796)
++||||+++++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999997643 489999999999999999999999 999999999999998877 89999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .............
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--------KQETLTNISAVNY 228 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTTCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--------hHHHHHHhHhccc
Confidence 998765432 2234568999999999998899999999999999999999999987321 1122222222211
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
... ..........+.+++.+|++.||++||+++|++++-
T Consensus 229 ~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 267 (283)
T 3bhy_A 229 DFD-EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267 (283)
T ss_dssp CCC-HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred CCc-chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence 111 111112234578999999999999999999999863
No 141
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1e-39 Score=351.51 Aligned_cols=263 Identities=24% Similarity=0.371 Sum_probs=210.5
Q ss_pred HHHhcCCccceeeecccceeEEEEEcc-C-----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 003780 495 IKATEDFDIKYCIGTGGYGSVYKAQLP-N-----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFC 567 (796)
Q Consensus 495 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 567 (796)
....++|++.+.||+|+||.||+|... . ++.||+|.+....... ..+.+.+|+++++++ +||||+++++++
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHH--HHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChH--HHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 334678999999999999999999753 2 3479999997665332 246789999999999 899999999999
Q ss_pred EecceeeEEEeeccCCcHHHHHhhcCc-----------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 003780 568 LHKKCMFLIYKYMKRGSLFCFLRNDYE-----------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNIL 636 (796)
Q Consensus 568 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIl 636 (796)
..++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999975421 23478999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCC
Q 003780 637 LNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSP 713 (796)
Q Consensus 637 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~ 713 (796)
++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||.....
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---- 272 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV---- 272 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----
Confidence 999999999999999866443221 223457889999999998899999999999999999998 9999874221
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
.......+.......... .....+.+++.+||+.||.+|||++|++++|++..
T Consensus 273 ----~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 273 ----NSKFYKLVKDGYQMAQPA---FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp ----SHHHHHHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----hHHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111222222222211111 11234788999999999999999999999998764
No 142
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-39 Score=350.44 Aligned_cols=282 Identities=26% Similarity=0.368 Sum_probs=207.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.. +|+.||+|++....... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDK-MVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCch-HHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 468999999999999999999765 59999999987654432 3346788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999988876443 389999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh----------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL---------- 725 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 725 (796)
.........||+.|+|||++.+. .++.++||||+||++|+|++|+.||...... ..........
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-----DQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCHHHHHH
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHHHhCCCChhhhhH
Confidence 44444456799999999998775 6889999999999999999999998743210 0000000000
Q ss_pred -------cC-CCCC-----ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHHHhhhh
Q 003780 726 -------DS-RLSP-----PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLRNQI 792 (796)
Q Consensus 726 -------~~-~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~ 792 (796)
.. .... ............+.+++.+||+.||++|||++|++++-.-. ...+.+....+.+-++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~----~~~~~~~~~~~~~~~~ 327 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ----MDGFAERFSQELQLKV 327 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH----GGGHHHHHHHHHHC--
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhc----cCChhhhhhHHHhhcc
Confidence 00 0000 00000111234588999999999999999999999874322 2234444445556666
Q ss_pred ccC
Q 003780 793 NTT 795 (796)
Q Consensus 793 ~~~ 795 (796)
|++
T Consensus 328 ~~~ 330 (331)
T 4aaa_A 328 QKD 330 (331)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 143
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.8e-39 Score=339.81 Aligned_cols=253 Identities=30% Similarity=0.461 Sum_probs=209.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.+.|++.+.||+|+||.||+|.. .+++.||+|++....... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST--THHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH--HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 45799999999999999999975 579999999997665332 246899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999998753 489999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
.........|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ...... +.....+....
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~-~~~~~~~~~~~- 241 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFL-IPKNNPPTLEG- 241 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHH-HHHSCCCCCCS-
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--------HHHHHH-hhcCCCCCCcc-
Confidence 44444456799999999999999999999999999999999999999873211 111111 11111111111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.....+.+++.+||+.||++|||+.|++++..-
T Consensus 242 --~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 274 (303)
T 3a7i_A 242 --NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274 (303)
T ss_dssp --SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHH
T ss_pred --ccCHHHHHHHHHHcCCChhhCcCHHHHhhChhh
Confidence 112347899999999999999999999998543
No 144
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3e-39 Score=338.66 Aligned_cols=259 Identities=24% Similarity=0.408 Sum_probs=209.4
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..++++.||+|++...... .+.+.+|++++++++||||+++++++. .+..++|
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 85 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence 35689999999999999999999888889999999765433 357899999999999999999999986 4568899
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999999997542 12489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
.... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..... ..+.........
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~-~~~~~~~~~~~~ 232 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVI-QNLERGYRMVRP 232 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHH-HHHHTTCCCCCC
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--------HHHHH-HHHhcccCCCCc
Confidence 3221 223346788999999988889999999999999999999 899986321 11111 222222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
. .....+.+++.+|++.||++|||++++++.|+......
T Consensus 233 ~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 233 D---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred c---cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 1 12234789999999999999999999999998765443
No 145
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-39 Score=338.51 Aligned_cols=261 Identities=23% Similarity=0.362 Sum_probs=208.8
Q ss_pred cCCccce-eeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKY-CIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
++|.+.+ .||+|+||.||+|... +++.||+|++...... ...+.+.+|++++++++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 4566666 8999999999999743 6788999999875432 2356899999999999999999999999 556789
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999997532 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
...... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .. ....+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~-~~~~i~~~~~ 231 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PE-VMAFIEQGKR 231 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------HH-HHHHHHTTCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--------HH-HHHHHhcCCc
Confidence 543221 122346889999999988889999999999999999998 9999873221 11 1122222221
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNP 779 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 779 (796)
..... .....+.+++.+||+.||++||++.|++++|+........+
T Consensus 232 ~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 232 MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 11111 22335889999999999999999999999998876544433
No 146
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=349.30 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=194.8
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|.+.+.||+|+||+||+|+.+ +++.||+|++........ ...+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc--chhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57999999999999999999765 789999999975543221 224567999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9998 58988887643 2488999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc---
Q 003780 658 SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV--- 733 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 733 (796)
........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..... ......+............
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHhchhh
Confidence 444445578999999999876 5689999999999999999999999974221 1111111111111110000
Q ss_pred -------------------chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 734 -------------------DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 734 -------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..........+.+++.+||+.||++|||++|+++|-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 000011223578999999999999999999999974
No 147
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=343.50 Aligned_cols=262 Identities=27% Similarity=0.328 Sum_probs=200.3
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh--hHHHHHHHHHHHHHhhcC---CCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE--TTFFNSFQNEAHVLSKIA---HRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~ 570 (796)
..++|++.+.||+|+||+||+|+. .+|+.||+|++....... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999985 578999999997543211 111235667777777664 99999999999875
Q ss_pred c-----eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEE
Q 003780 571 K-----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFV 645 (796)
Q Consensus 571 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 645 (796)
. ..++||||+. |+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999997 599999986543 3489999999999999999999999 9999999999999999999999
Q ss_pred eeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 646 ADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+....
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~ 235 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKIFDLI 235 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----HHHHHHHHHHH
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHh
Confidence 999999876543 233456799999999999999999999999999999999999999974221 11111111111
Q ss_pred cCCC-------------------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 726 DSRL-------------------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 726 ~~~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... ..............+.+++.+||+.||++|||++|+++|-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 1000 0000011112234578999999999999999999999874
No 148
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-39 Score=348.90 Aligned_cols=262 Identities=22% Similarity=0.270 Sum_probs=195.1
Q ss_pred HHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
...++|++.+.||+|+||+||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE-GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccccc-ccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3457899999999999999999974 579999999997654332 23456789999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-----CCCcEEEeeec
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-----SKLEAFVADFG 649 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-----~~~~~kl~Dfg 649 (796)
+||||+++ +|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 110 lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99999984 9999998654 389999999999999999999999 999999999999994 55569999999
Q ss_pred cccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ..............
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-----IDQLFKIFEVLGLP 257 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCC
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-----HHHHHHHHHHhCCC
Confidence 998776544444556789999999998874 489999999999999999999999874221 01111111111000
Q ss_pred CCC----------------c-----cch-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 LSP----------------P-----VDR-MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 ~~~----------------~-----~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... . ... ........+.+++.+||+.||++|||++|+++|-.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 000 0 000 00002245789999999999999999999998744
No 149
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=344.18 Aligned_cols=265 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred HHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc--CCCceeeEEeEEEec---
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI--AHRNIVKLYGFCLHK--- 570 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~--- 570 (796)
...++|++.+.||+|+||.||+|+.. ++.||||++..... ..+..|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 35578999999999999999999875 89999999864432 2344555555554 899999999999887
Q ss_pred -ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEecCCCcEE
Q 003780 571 -KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC-----MPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~k 644 (796)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 7899999999999999999754 3899999999999999999999752 34899999999999999999999
Q ss_pred EeeeccccccCCCCCC----ccccccccCccCccccccCCcCcc------hhHHHHHHHHHHHHhC----------CCCC
Q 003780 645 VADFGTARLLDSDSSN----RTIVAGTYGYIAPELAYTMVVTEK------CDVYSFGVVALEVLMG----------RHPG 704 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------~DVwSlGv~l~elltg----------~~p~ 704 (796)
|+|||+++........ .....||+.|+|||++.+..++.+ +|||||||++|||+|| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999999876543222 124569999999999987766655 9999999999999999 5555
Q ss_pred cccccCCCCCchhhhHHHHhhcCCCCCccch--hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 705 ELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR--MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
...... .................+.... ........+.+++.+||+.||++|||++|++++|+....
T Consensus 263 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 263 HDLVPS---DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTSCS---SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcCC---CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 422111 1111111122222222222221 122445568899999999999999999999999988654
No 150
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.3e-39 Score=336.19 Aligned_cols=251 Identities=22% Similarity=0.382 Sum_probs=199.1
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|..+ +|+.||+|++...........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367999999999999999999765 7999999999765544334456889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999997653 388999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
.. ......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||.... ...............+ .
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~-~- 232 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKIRGGVFYIP-E- 232 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC-T-
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHhhcCcccCc-h-
Confidence 32 2234568999999999987765 589999999999999999999987321 1112222222211111 1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.....+.+++.+|++.||++|||++|++++
T Consensus 233 ---~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 ---YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 112347789999999999999999999997
No 151
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-39 Score=356.39 Aligned_cols=259 Identities=25% Similarity=0.338 Sum_probs=192.0
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecc--e
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKK--C 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~--~ 572 (796)
..++|++.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|+.+++++. ||||+++++++..++ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS-TDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccCh-HHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 467899999999999999999974 579999999997654332 23467889999999997 999999999997654 6
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999998 5899988753 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC---------------------CCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccC
Q 003780 653 LLDSD---------------------SSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSL 710 (796)
Q Consensus 653 ~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~ 710 (796)
.+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~- 236 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST- 236 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 65321 111233579999999999876 6789999999999999999999999974321
Q ss_pred CCCCchhhhHHHHhhcCCC--------------------------CCccchhhH-------------HHHHHHHHHHHHc
Q 003780 711 SSPSSDQKIMLIDVLDSRL--------------------------SPPVDRMVM-------------QDIVLVTTVALAC 751 (796)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~-------------~~~~~l~~li~~c 751 (796)
......+...+.... ......... .....+.+++.+|
T Consensus 237 ----~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~ 312 (388)
T 3oz6_A 237 ----MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312 (388)
T ss_dssp ----HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred ----HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence 001111111110000 000000000 1123578999999
Q ss_pred CCCCCCCCCCHHHHHHHH
Q 003780 752 LHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 752 l~~dP~~RPs~~evl~~L 769 (796)
|+.||++|||++|+++|-
T Consensus 313 L~~dP~~R~t~~e~l~Hp 330 (388)
T 3oz6_A 313 LQFNPNKRISANDALKHP 330 (388)
T ss_dssp CCSSGGGSCCHHHHTTST
T ss_pred hccCcccCCCHHHHhCCH
Confidence 999999999999999983
No 152
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.6e-39 Score=348.62 Aligned_cols=255 Identities=25% Similarity=0.388 Sum_probs=200.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcE----EEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKV----VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
++|++.+.||+|+||.||+|... +++. ||+|.+...... ...+.+.+|+.++++++||||+++++++. .+..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 57899999999999999999754 4444 788877544322 12346788999999999999999999986 5678
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 89999999999999997642 3488899999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 654 LDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 654 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
...... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||..... ......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------~~~~~~~~~~~~ 235 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL---------AEVPDLLEKGER 235 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT---------THHHHHHHTTCB
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH---------HHHHHHHHcCCC
Confidence 754432 2234567889999999998999999999999999999999 9999874321 111122222111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...... ....+.+++.+||+.||++||+++|++++|++..
T Consensus 236 ~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 236 LAQPQI---CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp CCCCTT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CCCCCc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111 1123668999999999999999999999998754
No 153
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.1e-39 Score=362.20 Aligned_cols=256 Identities=22% Similarity=0.238 Sum_probs=196.5
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------ 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 570 (796)
.++|++.+.||+|+||+||+|.. .+|+.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSH-HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccCh-HHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 56899999999999999999964 479999999998654332 3356788999999999999999999999654
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++||||++++ +.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 3579999999864 6666643 288999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH---------
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML--------- 721 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~--------- 721 (796)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. .....+
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-----~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-----DQWNKVIEQLGTPCP 284 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCSCCH
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCCH
Confidence 9876543 2334467999999999999999999999999999999999999999743210 000000
Q ss_pred ----------HHhhcCCCC---------------CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 722 ----------IDVLDSRLS---------------PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 722 ----------~~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...+..... +............+.+++.+||+.||++|||++|+++|-
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 011111000 000111111245688999999999999999999999984
No 154
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=349.41 Aligned_cols=248 Identities=23% Similarity=0.374 Sum_probs=205.7
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhh-----HHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEET-----TFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|++.+.||+|+||.||+|+. .+++.||||++........ ...+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999974 5799999999987643221 1234677899999999999999999999999
Q ss_pred ceeeEEEeeccCC-cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 571 KCMFLIYKYMKRG-SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 571 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999998653 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
+++....... .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... .....
T Consensus 176 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 9987654332 334569999999999988776 7899999999999999999999874221 11111
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
...+.. ....+.+++.+||+.||++|||++|++++-.
T Consensus 241 ~~~~~~-----~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 241 IHPPYL-----VSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp CCCSSC-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred cCCCcc-----cCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 111110 1234779999999999999999999999853
No 155
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.7e-39 Score=345.55 Aligned_cols=267 Identities=24% Similarity=0.357 Sum_probs=212.1
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeE
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKL 563 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l 563 (796)
...+....++|++.+.||+|+||.||+|+. .+++.||||++....... ..+.+.+|++++.++ +||||+++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH--HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcH--HHHHHHHHHHHHHhcccCCCeeeE
Confidence 334444568999999999999999999963 357899999998654332 246789999999999 69999999
Q ss_pred EeEEEecc-eeeEEEeeccCCcHHHHHhhcCc-------------ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEec
Q 003780 564 YGFCLHKK-CMFLIYKYMKRGSLFCFLRNDYE-------------AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629 (796)
Q Consensus 564 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~d 629 (796)
++++..++ ..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99998755 58999999999999999986543 12278999999999999999999999 999999
Q ss_pred CCCCCeEecCCCcEEEeeeccccccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcc
Q 003780 630 ISSNNILLNSKLEAFVADFGTARLLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGEL 706 (796)
Q Consensus 630 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~ 706 (796)
|||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|+|++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543322 233457889999999999999999999999999999998 9999874
Q ss_pred cccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 707 LSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
... . . .....+.......... .....+.+++.+||+.||++|||++|++++|+...
T Consensus 254 ~~~----~---~-~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 254 VKI----D---E-EFCRRLKEGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CCC----S---H-HHHHHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cch----h---H-HHHHHhccCccCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 221 1 1 1111111111111111 11234789999999999999999999999998764
No 156
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.3e-39 Score=344.42 Aligned_cols=267 Identities=24% Similarity=0.340 Sum_probs=210.2
Q ss_pred hcCCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE--ec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL--HK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~ 570 (796)
.++|++.+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++. ..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD---QQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHH---HHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHH---HHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 36899999999999999999973 46899999999765432 2467899999999999999999999987 45
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++||||+++++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 678999999999999999986432 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC------CCCCchhhhHH
Q 003780 651 ARLLDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL------SSPSSDQKIML 721 (796)
Q Consensus 651 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~------~~~~~~~~~~~ 721 (796)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9876543321 22345788899999999988999999999999999999999998632210 00001111122
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
...+.......... .....+.+++.+||+.||++|||++|++++|+.....
T Consensus 254 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 254 LELLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHHhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 22333333222221 2223478999999999999999999999999887543
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-39 Score=340.05 Aligned_cols=257 Identities=22% Similarity=0.333 Sum_probs=204.4
Q ss_pred hcCCccce-eeecccceeEEEEEc---cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKY-CIGTGGYGSVYKAQL---PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|.+.+ .||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 46788888 999999999999953 34789999999766433 23356899999999999999999999999 56778
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999998653 388999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~~~~~~~ 237 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---------SEVTAMLEKGE 237 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HHHHHHHHTTC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH---------HHHHHHHHcCC
Confidence 6543322 122346788999999988889999999999999999999 9999873221 11222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
...... .....+.+++.+||+.||++||++.|+++.|+....
T Consensus 238 ~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 238 RMGCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222111 223348899999999999999999999999987643
No 158
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.9e-39 Score=336.56 Aligned_cols=254 Identities=25% Similarity=0.365 Sum_probs=198.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|.+.+.||+|+||.||+|+. .+++.||+|++....... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV--PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch--hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 46799999999999999999975 468999999997765332 246789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeecccc
Q 003780 577 YKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTAR 652 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~ 652 (796)
|||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999886532 224589999999999999999999999 99999999999999 456789999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ......||+.|+|||.+. ..++.++||||+|+++|||++|+.||.... ..................
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKATYKEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCC-
T ss_pred ecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhhccCCcccccc
Confidence 765432 233456899999999876 467899999999999999999999987321 111111111111111111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
... ....+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12347789999999999999999999976
No 159
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-39 Score=359.21 Aligned_cols=258 Identities=22% Similarity=0.291 Sum_probs=195.1
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchh-----hHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEE-----TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|.+.+.||+|+||.||+|.. .+++.||||++....... ......+.+|++++++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 567899999999999999999965 468999999997654221 112235889999999999999999999985 4
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---cEEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---EAFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~D 647 (796)
+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 55789999999999998887543 489999999999999999999999 999999999999997544 599999
Q ss_pred eccccccCCCCCCccccccccCccCcccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ......
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--------~~~~~~ 356 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--------VSLKDQ 356 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--------CCHHHH
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--------HHHHHH
Confidence 9999876543 22344679999999999863 56788999999999999999999999742211 111111
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
+..................+.+++.+||+.||++|||++|+++|-.
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 1222111111111122345789999999999999999999998743
No 160
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.3e-39 Score=365.77 Aligned_cols=256 Identities=24% Similarity=0.358 Sum_probs=210.2
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ +|+.||||++...........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999765 7999999999766543333356899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeeccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTARL 653 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~ 653 (796)
|||+.+|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999987653 389999999999999999999999 99999999999999 5678999999999987
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+.........
T Consensus 179 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 179 FEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--------EYDILKKVEKGKYTFEL 248 (484)
T ss_dssp BCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCS
T ss_pred ccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCCC
Confidence 65433 3344569999999999876 68999999999999999999999997321 12223333333322221
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.. .......+.+++.+||+.||++|||++|+++|-.
T Consensus 249 ~~-~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 249 PQ-WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp GG-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred cc-cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 11 1122345789999999999999999999998753
No 161
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.6e-39 Score=342.06 Aligned_cols=263 Identities=22% Similarity=0.342 Sum_probs=199.4
Q ss_pred HHhcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
...++|.+.+.||+|+||.||+|... .++.||+|++....... ...+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ-REIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH-HHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch-hHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 35678999999999999999999653 35589999997664433 23567899999999999999999999998765
Q ss_pred -----eeeEEEeeccCCcHHHHHhhcC---cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcE
Q 003780 572 -----CMFLIYKYMKRGSLFCFLRNDY---EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 572 -----~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
..++||||+++|+|.+++.... ....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3499999999999999985432 234589999999999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 644 FVADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~ 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--------HEM 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHH
Confidence 9999999987644321 2233457889999999999999999999999999999999 8889863221 111
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
......... ..... .....+.+++.+||+.||++|||+++++++|+....
T Consensus 259 ~~~~~~~~~-~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 259 YDYLLHGHR-LKQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HHHHHTTCC-CCCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-CCCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222222211 11111 122347899999999999999999999999987643
No 162
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=350.40 Aligned_cols=267 Identities=17% Similarity=0.182 Sum_probs=202.1
Q ss_pred hcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhH--------HHHHHHHHHHHHhhcCCCceeeEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETT--------FFNSFQNEAHVLSKIAHRNIVKLYG 565 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~ 565 (796)
.++|.+.+.||+|+||.||+|... ++..+|+|++......... ..+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999765 5788999998765432111 1134678889999999999999999
Q ss_pred EEEe----cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC
Q 003780 566 FCLH----KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL 641 (796)
Q Consensus 566 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 641 (796)
++.. ....++||||+ +++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9988 77899999999 999999997653 589999999999999999999999 999999999999999887
Q ss_pred --cEEEeeeccccccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC
Q 003780 642 --EAFVADFGTARLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS 712 (796)
Q Consensus 642 --~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~ 712 (796)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--- 265 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK--- 265 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT---
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc---
Confidence 999999999987643211 11345699999999999999999999999999999999999999963211
Q ss_pred CCchhhhHHHHhhcCCCCCccchhh--HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMV--MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
........................ ......+.+++.+||+.||++||++++|++.|+.....
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 266 -DPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp -CHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred -ccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 111111111111222211110000 01223588999999999999999999999999987653
No 163
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-40 Score=352.09 Aligned_cols=261 Identities=24% Similarity=0.355 Sum_probs=191.3
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh--cCCCceeeEEeEEEecc----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK--IAHRNIVKLYGFCLHKK---- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~---- 571 (796)
.++|.+.+.||+|+||.||+|+.. |+.||||++.... .+.+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 367999999999999999999875 8999999986543 2456778888887 78999999999998876
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEecCCCCCeEecCCCcE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH--------HDCMPSIVHRDISSNNILLNSKLEA 643 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~dlkp~NIll~~~~~~ 643 (796)
..++||||+++|+|.+++++. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999754 3778889999999999999999 76 99999999999999999999
Q ss_pred EEeeeccccccCCCCCC----ccccccccCccCccccccC------CcCcchhHHHHHHHHHHHHhC----------CCC
Q 003780 644 FVADFGTARLLDSDSSN----RTIVAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG----------RHP 703 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DVwSlGv~l~elltg----------~~p 703 (796)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999766543322 1234699999999998776 455689999999999999999 556
Q ss_pred CcccccCCCCCchhhhHHHHhhcCCCCCccch--hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 704 GELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR--MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
|........ ...............+.... ........+.+++.+||+.||++|||++|+++.|++....
T Consensus 228 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 228 YYDLVPSDP---SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TTTTCC-CC---CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccccCCCCc---cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 543221111 11112222333333333222 1224445689999999999999999999999999987654
No 164
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.3e-39 Score=342.21 Aligned_cols=262 Identities=19% Similarity=0.302 Sum_probs=199.9
Q ss_pred hcCCccc-eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 498 TEDFDIK-YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 498 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
.+.|++. +.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++.++ +||||+++++++..++..+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 3568774 7899999999999975 47999999999765432 245788999999985 7999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEeeeccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVADFGTA 651 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a 651 (796)
+||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999998653 388999999999999999999999 9999999999999998776 999999999
Q ss_pred cccCCCCC-------CccccccccCccCcccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc----
Q 003780 652 RLLDSDSS-------NRTIVAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS---- 715 (796)
Q Consensus 652 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~---- 715 (796)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76542211 1123459999999999875 5688999999999999999999999975432110000
Q ss_pred ---hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 716 ---DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 716 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
........+.......+.. ........+.+++.+||+.||++|||++|+++|-
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDK-DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHH-HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred chhHHHHHHHHHhccCcccCch-hcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 0111222222222221111 0111234588999999999999999999999974
No 165
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-38 Score=355.48 Aligned_cols=200 Identities=27% Similarity=0.374 Sum_probs=169.1
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 571 (796)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED-LIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcC-hHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 56899999999999999999975 46899999999765433 23356889999999999999999999999776 5
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 7899999987 59999997543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------------------CccccccccCccCcccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 652 RLLDSDSS----------------------NRTIVAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 652 ~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
+....... ......||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87654321 12456799999999985 56679999999999999999999766654
No 166
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=369.58 Aligned_cols=266 Identities=26% Similarity=0.414 Sum_probs=215.1
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
..++|++.+.||+|+||.||+|..+++..||||+++..... .+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 35678999999999999999999888889999999865432 3578999999999999999999999876 678999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.++++... ...+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997532 23488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 657 DSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 657 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
... ......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ... +...+.........
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--------~~~-~~~~i~~~~~~~~~ 486 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NRE-VLDQVERGYRMPCP 486 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--------HHH-HHHHHHTTCCCCCC
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHH-HHHHHHcCCCCCCC
Confidence 211 1122346788999999998899999999999999999999 999987321 111 22222222221111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccc
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEI 783 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 783 (796)
. .....+.+++.+||+.||++|||+++|++.|+.......+.|.+.
T Consensus 487 ~---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~ 532 (535)
T 2h8h_A 487 P---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 532 (535)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC-
T ss_pred C---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcccCcc
Confidence 1 122347899999999999999999999999999887776666543
No 167
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-38 Score=341.06 Aligned_cols=262 Identities=22% Similarity=0.335 Sum_probs=208.2
Q ss_pred CccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec--cee
Q 003780 501 FDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--KCM 573 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 573 (796)
|++.+.||+|+||+||++.+ .+++.||||++...... ...+.+.+|++++++++||||+++++++... ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP--QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccCh--HHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 48999999999999998854 26899999999866432 2356799999999999999999999999874 678
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.+.. +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999997642 89999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC-----C-CCCchhhhHHHHh
Q 003780 654 LDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL-----S-SPSSDQKIMLIDV 724 (796)
Q Consensus 654 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~-----~-~~~~~~~~~~~~~ 724 (796)
....... .....+|+.|+|||.+.+..++.++||||+|+++|+|++|+.||...... . .............
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 7543321 22345788899999999988999999999999999999999998732110 0 0011111223333
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
+.......... .....+.+++.+||+.||++|||++|+++.|+....
T Consensus 264 ~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 264 LERGERLPRPD---KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcccCCCCCc---cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 33333322222 222358899999999999999999999999987643
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-38 Score=333.42 Aligned_cols=255 Identities=24% Similarity=0.324 Sum_probs=205.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ +++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTT--HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchh--hhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 3468999999999999999999765 79999999997654332 24678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999988654 2489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 656 SDS--SNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 656 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
... .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||...... ...............
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 229 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-------CQEYSDWKEKKTYLN 229 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-------SHHHHHHHTTCTTST
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHHhhhcccccC
Confidence 322 12234568999999999987665 67899999999999999999999743210 011111111111111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .......+.+++.+||+.||++|||++|++++-
T Consensus 230 ~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 230 P---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp T---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred c---hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 1 111233477899999999999999999998863
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=336.43 Aligned_cols=254 Identities=23% Similarity=0.373 Sum_probs=201.0
Q ss_pred CCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEe
Q 003780 500 DFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e 578 (796)
+|.....||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchH---HHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 455566999999999999975 57899999999765432 24678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-CCcEEEeeeccccccCCC
Q 003780 579 YMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-KLEAFVADFGTARLLDSD 657 (796)
Q Consensus 579 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~ 657 (796)
|+++++|.+++.........++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||.+......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999998765545577899999999999999999999 9999999999999987 899999999999876544
Q ss_pred CCCccccccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ........... ...+....
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~-~~~~~~~~ 249 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE------PQAAMFKVGMF-KVHPEIPE 249 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS------HHHHHHHHHHH-CCCCCCCT
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc------hhHHHHhhccc-cccccccc
Confidence 33344456899999999987653 78899999999999999999999874221 11111111111 11111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+.+++.+||+.||++||+++|++++-
T Consensus 250 ---~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~ 280 (295)
T 2clq_A 250 ---SMSAEAKAFILKCFEPDPDKRACANDLLVDE 280 (295)
T ss_dssp ---TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred ---cCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 1123477899999999999999999999763
No 170
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.2e-38 Score=348.94 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=193.4
Q ss_pred hcCCccc-eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhh-cCCCceeeEEeEEEe----c
Q 003780 498 TEDFDIK-YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSK-IAHRNIVKLYGFCLH----K 570 (796)
Q Consensus 498 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~----~ 570 (796)
.++|.+. +.||+|+||+||+|..+ +|+.||||++... ..+.+|++++.+ .+||||+++++++.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 3567776 68999999999999754 6899999998632 246678888754 489999999999876 5
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~D 647 (796)
...++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 67899999999999999998643 23589999999999999999999999 9999999999999998 78999999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||............ ...+...
T Consensus 208 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~----~~~i~~~ 282 (400)
T 1nxk_A 208 FGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KTRIRMG 282 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH----HHHHHHT
T ss_pred cccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH----HHHHHcC
Confidence 99998765322 234467899999999999999999999999999999999999999754332111111 1111111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
........ .......+.+++.+||+.||++|||++|+++|-.
T Consensus 283 ~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 283 QYEFPNPE-WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp CCCCCTTT-TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cccCCCcc-cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 11111000 0112234789999999999999999999999854
No 171
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.2e-39 Score=362.03 Aligned_cols=256 Identities=25% Similarity=0.342 Sum_probs=206.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||+||+|..+ +++.||||++........ ..+.+.+|++++++++||||+++++++..+...++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch-HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 3568999999999999999999754 799999999975443222 24678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec---CCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN---SKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~ 652 (796)
||||+++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999999887653 389999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+........
T Consensus 173 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 173 CFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCSC
T ss_pred ECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 765432 2334569999999999876 58999999999999999999999987321 1222333333332222
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... .......+.+++.+||+.||++|||+.|+++|-.
T Consensus 243 ~~~-~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 243 LPQ-WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp SGG-GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred Ccc-cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 111 1122345789999999999999999999999843
No 172
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.8e-38 Score=341.70 Aligned_cols=267 Identities=23% Similarity=0.338 Sum_probs=210.3
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhh--cCCCceeeEEeEEE
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSK--IAHRNIVKLYGFCL 568 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~ 568 (796)
+.--....++|++.+.||+|+||.||+|+. +|+.||||++.... .+.+.+|++++.. ++||||+++++++.
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 333345667899999999999999999987 48999999986432 2467788888887 78999999999998
Q ss_pred ecc----eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEecCCCCCeE
Q 003780 569 HKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH--------HDCMPSIVHRDISSNNIL 636 (796)
Q Consensus 569 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~dlkp~NIl 636 (796)
... ..++||||+++|+|.+++.+. .+++..++.++.|+++||+||| +. +|+||||||+||+
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 876 789999999999999999754 3899999999999999999999 66 9999999999999
Q ss_pred ecCCCcEEEeeeccccccCCCCCC----ccccccccCccCccccccC------CcCcchhHHHHHHHHHHHHhC------
Q 003780 637 LNSKLEAFVADFGTARLLDSDSSN----RTIVAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG------ 700 (796)
Q Consensus 637 l~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DVwSlGv~l~elltg------ 700 (796)
++.++.+||+|||++......... .....||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999876544321 2334699999999998765 344689999999999999999
Q ss_pred ----CCCCcccccCCCCCchhhhHHHHhhcCCCCCccch--hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 701 ----RHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR--MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 701 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
+.||...... .................+.... ........+.+++.+||+.||++|||+.|++++|++...
T Consensus 260 ~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 260 HEDYQLPYYDLVPS---DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp CCCCCCTTTTTSCS---SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccccCccccCcC---cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 6777533221 1111222222333333333221 122445568899999999999999999999999987643
No 173
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=341.94 Aligned_cols=256 Identities=29% Similarity=0.416 Sum_probs=200.6
Q ss_pred cCCccceeeecccceeEEEEEccC-----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPN-----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.+|++.+.||+|+||.||+|..+. +..||+|++...... .....+.+|++++++++||||+++++++...+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE--KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 567888999999999999997542 346999999765432 2245789999999999999999999999999999
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999997642 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
....... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.... ..... ..+....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~~-~~~~~~~ 267 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--------NHEVM-KAINDGF 267 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHH-HHHHTTC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--------HHHHH-HHHHCCC
Confidence 6543221 122345778999999998899999999999999999999 999986321 11122 2222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..+... .....+.+++.+||+.||++||+++|++++|++..
T Consensus 268 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 268 RLPTPM---DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp CCCCCT---TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred cCCCcc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111 12234789999999999999999999999998754
No 174
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.2e-38 Score=335.44 Aligned_cols=250 Identities=20% Similarity=0.297 Sum_probs=201.0
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|... +++.||+|++......... ...+.+|+..+.++ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHH-HHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHH-HHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 3568999999999999999999765 7999999999865443322 46788999999999 8999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCc-ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-------------
Q 003780 575 LIYKYMKRGSLFCFLRNDYE-AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK------------- 640 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~------------- 640 (796)
+||||+++|+|.+++..... ...+++..+..++.||++||+|||++ +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999976432 14589999999999999999999999 99999999999999844
Q ss_pred ------CcEEEeeeccccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCC
Q 003780 641 ------LEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSP 713 (796)
Q Consensus 641 ------~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~ 713 (796)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|+|++|..|+...
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 234 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------ 234 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence 478999999998765432 23489999999998766 5668999999999999999999875421
Q ss_pred CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 714 SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.. .......... .... .....+.+++.+||+.||++|||++|++++-
T Consensus 235 --~~---~~~~~~~~~~-~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 235 --DQ---WHEIRQGRLP-RIPQ---VLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp --HH---HHHHHTTCCC-CCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred --hH---HHHHHcCCCC-CCCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 11 1111122221 1111 1123478999999999999999999999874
No 175
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=358.78 Aligned_cols=342 Identities=20% Similarity=0.228 Sum_probs=280.7
Q ss_pred CCceeeCCC----------CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCc
Q 003780 63 LDGVTCNTA----------RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN 132 (796)
Q Consensus 63 w~gv~C~~~----------~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 132 (796)
|..|.|... .+++.|+|+++++++..+ ..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 667777532 367888999988886543 458889999999999999998888889999999999999999
Q ss_pred CCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhh
Q 003780 133 LTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQE 212 (796)
Q Consensus 133 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 212 (796)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++++.+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 98776677888999999999999998888888899999999999999998888888999999999999999999888888
Q ss_pred hcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccc
Q 003780 213 LGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLL 292 (796)
Q Consensus 213 ~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 292 (796)
+.++++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|++++..+..|..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 99999999999999999888888888899999999999888878887777777899999999999876667788899999
Q ss_pred cccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccc
Q 003780 293 YLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNK 371 (796)
Q Consensus 293 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~ 371 (796)
+|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+ .+++|+.|+|++|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 99999999988888888889999999999999998888889999999999999999987666555 47889999999999
Q ss_pred cCCCCCccc--cccccccccCCCCcccCCCCCCCCC
Q 003780 372 LNGTIPPFL--YHRFPLDLSYNDLEGEIPDYFRDSP 405 (796)
Q Consensus 372 l~~~~p~~~--~~~~~l~l~~N~l~~~~p~~~~~~~ 405 (796)
+++..+... .....+++.++.....-|..+...+
T Consensus 332 l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~~g~~ 367 (477)
T 2id5_A 332 LACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKE 367 (477)
T ss_dssp EECSGGGHHHHTTTTSSCCTTCCCBEEESGGGTTCB
T ss_pred ccCccchHhHHhhhhccccCccCceeCCchHHcCCc
Confidence 886654211 1122344555555544555444433
No 176
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.6e-38 Score=333.53 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=200.9
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----ccee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----KKCM 573 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~ 573 (796)
..|.+.+.||+|+||.||+|.. .++..||+|.+........ ..+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHH-HHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 3578888999999999999965 4688999999986654432 35688999999999999999999999875 3568
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEec-CCCcEEEeeecc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS--IVHRDISSNNILLN-SKLEAFVADFGT 650 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~dlkp~NIll~-~~~~~kl~Dfg~ 650 (796)
++||||+++|+|.+++.+.. .+++..+..++.|+++||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999998643 388999999999999999999998 7 99999999999998 789999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
+...... ......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||.... ........+.....
T Consensus 179 ~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ--------NAAQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS--------SHHHHHHHHTTTCC
T ss_pred ccccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC--------cHHHHHHHHhccCC
Confidence 9764432 3334569999999998764 58999999999999999999999986321 11122222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
+.. ........+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 PAS--FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CGG--GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccc--cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 111122358899999999999999999999986
No 177
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.8e-39 Score=360.57 Aligned_cols=264 Identities=24% Similarity=0.296 Sum_probs=186.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 571 (796)
.++|++.+.||+|+||+||+|+.+ +|+.||||++....... ...+.+.+|++++++++||||+++++++... .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL-IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSH-HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCH-HHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 468999999999999999999754 78999999997654332 3356889999999999999999999999543 5
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999985 69999987543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---------------------------CccccccccCccCcccc-ccCCcCcchhHHHHHHHHHHHHh----
Q 003780 652 RLLDSDSS---------------------------NRTIVAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLM---- 699 (796)
Q Consensus 652 ~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwSlGv~l~ellt---- 699 (796)
+....... .....+||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 87643211 12335689999999976 56679999999999999999999
Q ss_pred -------CCCCCcccccCCCCC---------------chhhhHHHHhh-----------------------cCCCCCccc
Q 003780 700 -------GRHPGELLSSLSSPS---------------SDQKIMLIDVL-----------------------DSRLSPPVD 734 (796)
Q Consensus 700 -------g~~p~~~~~~~~~~~---------------~~~~~~~~~~~-----------------------~~~~~~~~~ 734 (796)
|+.+|.......... ..+...+.+.+ .........
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 445543222110000 00000000110 011111111
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.........+.+++.+||+.||++|||++|+++|-
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp 398 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHP 398 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence 11112234578999999999999999999999984
No 178
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.2e-38 Score=334.45 Aligned_cols=257 Identities=25% Similarity=0.339 Sum_probs=202.5
Q ss_pred HhcCCccceeeecccceeEEEEEccC----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
..++|.+.+.||+|+||.||+|...+ +..||+|.+...... ...+.+.+|+.++++++||||+++++++.+ +.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH--HHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc--hHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 34689999999999999999997532 346999999866432 224689999999999999999999999865 45
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++++|.+++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 689999999999999997643 3488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 653 LLDSDSS-NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 653 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
....... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... .... ..+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--------~~~~-~~~~~~~~ 232 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--------KDVI-GVLEKGDR 232 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--------GGHH-HHHHHTCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--------HHHH-HHHhcCCC
Confidence 7654322 2233457889999999988889999999999999999998 9999863221 1111 11111111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..... .....+.+++.+|++.||++||++.|++++|+...
T Consensus 233 ~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 233 LPKPD---LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 11111 11234789999999999999999999999998763
No 179
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.7e-39 Score=339.62 Aligned_cols=253 Identities=24% Similarity=0.339 Sum_probs=204.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|.+.+.||+|+||.||+|+.+ +|+.||+|++....... .+.+.+|++++++++||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 3567999999999999999999764 79999999998654322 3468899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~ 652 (796)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999987643 388999999999999999999999 99999999999999 788999999999997
Q ss_pred ccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCc
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPP 732 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (796)
..... ......|++.|+|||.+.+..++.++||||+||++|+|++|+.||.... .......+........
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 158 MEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--------ESKLFEKIKEGYYEFE 227 (304)
T ss_dssp CCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHCCCCCC
T ss_pred ecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCC
Confidence 54322 2334569999999999999999999999999999999999999987321 1112222222221111
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 733 VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 733 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. .........+.+++.+|++.||++|||++|++++-
T Consensus 228 ~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 228 S-PFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp T-TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred c-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0 00112234578999999999999999999999874
No 180
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-38 Score=334.05 Aligned_cols=250 Identities=25% Similarity=0.421 Sum_probs=206.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe------
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------ 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------ 569 (796)
...+|++.+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 4567999999999999999999765 79999999997553 246789999999999999999998864
Q ss_pred ----------cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC
Q 003780 570 ----------KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS 639 (796)
Q Consensus 570 ----------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 639 (796)
....++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 456899999999999999997643 23589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhh
Q 003780 640 KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~ 719 (796)
++.+||+|||++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|..|+... ..
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~ 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SK 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HH
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HH
Confidence 9999999999998765433 233456999999999999989999999999999999999999986521 11
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
.............. ...+.+++.+||+.||++|||+.|++++|+.....
T Consensus 227 ~~~~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 227 FFTDLRDGIISDIF-------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHHHHHTTCCCTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred HHHHhhcccccccC-------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11222222222111 12367899999999999999999999999887643
No 181
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.2e-38 Score=372.81 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=211.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|+.+ +++.||||++...........+.+..|..++..+ +||+|+++++++...+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999754 6889999999865443333456788899999988 6999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998653 389999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccc
Q 003780 655 DSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVD 734 (796)
Q Consensus 655 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (796)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||... ........++......+.
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~~~~~p~- 563 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHNVAYPK- 563 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHSSCCCCCT-
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCCCCCCc-
Confidence 54444455678999999999999999999999999999999999999999732 223334444444333221
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 003780 735 RMVMQDIVLVTTVALACLHSKPKFRPTM-----QRVCQE 768 (796)
Q Consensus 735 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 768 (796)
.....+.+++.+||+.||++||++ +||++|
T Consensus 564 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 564 ----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 122347899999999999999997 777665
No 182
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-39 Score=347.05 Aligned_cols=264 Identities=23% Similarity=0.296 Sum_probs=199.4
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchh--hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEE--TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
...++|++.+.||+|+||.||+|..+ +|+.||||++....... ....+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999865 68999999997644322 1123468899999999999999999999999999
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 8888887543 3478888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
.............||+.|+|||++.+. .++.++||||+||++|||++|..||..... ......+..........
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-----~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----LDQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCTT
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHcCCCChh
Confidence 776554444556799999999998754 588999999999999999999999863221 01111111111100000
Q ss_pred c--------------------cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 732 P--------------------VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 732 ~--------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
. ...........+.+++.+||+.||++|||++|++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0 00000112245889999999999999999999999854
No 183
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=338.74 Aligned_cols=255 Identities=27% Similarity=0.404 Sum_probs=203.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4568999999999999999999765 699999999976532 3578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999987432 3489999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 656 SDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......... ...+....
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~~~~ 247 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MRAIFMIPT-NPPPTFRK 247 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHH-SCCCCCSS
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhc-CCCcccCC
Confidence 544444456789999999999998999999999999999999999999873221 111111111 11111110
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhh
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLT 771 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 771 (796)
.......+.+++.+||+.||++|||+.|++++-.-
T Consensus 248 -~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~ 282 (314)
T 3com_A 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282 (314)
T ss_dssp -GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 11123357899999999999999999999987543
No 184
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.5e-39 Score=344.18 Aligned_cols=269 Identities=20% Similarity=0.286 Sum_probs=210.2
Q ss_pred ccHHHHHHHhcCCccc-eeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEe
Q 003780 489 IAFEDIIKATEDFDIK-YCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYG 565 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~ 565 (796)
+.++......++|.+. +.||+|+||.||+|..+ +|+.||+|++........ ....+.+|+.++++++ ||||+++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-CRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-CHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-HHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 4445555667788887 89999999999999755 699999999987654332 2467899999999995 699999999
Q ss_pred EEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCc
Q 003780 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLE 642 (796)
Q Consensus 566 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~ 642 (796)
++..++..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986532 24589999999999999999999999 9999999999999998 789
Q ss_pred EEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 643 AFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 243 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--------NQETYL 243 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHH
Confidence 9999999998765432 2234569999999999999999999999999999999999999986321 111222
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
.+.......... ........+.+++.+||+.||++|||++|++++-.-.
T Consensus 244 ~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~ 292 (327)
T 3lm5_A 244 NISQVNVDYSEE-TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292 (327)
T ss_dssp HHHHTCCCCCTT-TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGC
T ss_pred HHHhcccccCch-hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhc
Confidence 222211111111 0112233478999999999999999999999885443
No 185
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-38 Score=360.92 Aligned_cols=257 Identities=26% Similarity=0.357 Sum_probs=205.3
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhh----------HHHHHHHHHHHHHhhcCCCceeeEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEET----------TFFNSFQNEAHVLSKIAHRNIVKLYG 565 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hpniv~l~~ 565 (796)
..++|.+.+.||+|+||+||+|..+ +++.||+|++........ ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999754 689999999986543321 22467899999999999999999999
Q ss_pred EEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---c
Q 003780 566 FCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL---E 642 (796)
Q Consensus 566 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~ 642 (796)
++..+...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999987653 389999999999999999999999 999999999999999876 6
Q ss_pred EEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 643 AFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ......
T Consensus 188 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDIIK 257 (504)
T ss_dssp EEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred EEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence 9999999998765432 3344569999999999874 68999999999999999999999997321 222333
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.+........... .......+.+++.+||+.||.+|||++|+++|-.
T Consensus 258 ~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 258 KVEKGKYYFDFND-WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HHHHCCCCCCHHH-HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHcCCCCCCccc-cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 3333333222111 1122345789999999999999999999998843
No 186
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-38 Score=336.36 Aligned_cols=261 Identities=25% Similarity=0.324 Sum_probs=202.1
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~ 577 (796)
++|++.+.||+|+||.||+|+.+ +|+.||||++....... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccch-hhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57999999999999999999765 79999999987654322 22357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++ |+|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 699999876532 3488999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC---------
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS--------- 727 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 727 (796)
........+|+.|+|||.+.+.. ++.++|||||||++|+|++|+.||..... ......+......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-----IDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHHHhCCCchhhhhHh
Confidence 33344456899999999988765 78999999999999999999999974321 0000111111000
Q ss_pred --------CCC----CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 --------RLS----PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 --------~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
... .............+.+++.+|++.||++|||++|++++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~ 286 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChh
Confidence 000 0000001112345789999999999999999999998743
No 187
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.6e-39 Score=337.33 Aligned_cols=260 Identities=24% Similarity=0.369 Sum_probs=198.8
Q ss_pred hcCCccceeeecccceeEEEEEcc--CCc--EEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--NGK--VVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 573 (796)
.++|++.+.||+|+||+||+|++. +++ .||+|+++..........+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357999999999999999999743 333 68999998765444445678999999999999999999999998765 8
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++|+||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997643 3488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
....... .....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.... .............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HHHHHHHHHccCC
Confidence 6543322 223457788999999988889999999999999999999 999987321 1222222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
...... .....+.+++.+|++.||++|||+++++++|++...
T Consensus 243 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 243 RLPRPE---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CCCCCc---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 222111 123348899999999999999999999999988765
No 188
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=341.68 Aligned_cols=265 Identities=21% Similarity=0.318 Sum_probs=206.0
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----cce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----KKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~ 572 (796)
.++|++.+.||+|+||.||+++. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ---QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH---HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH---HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 46899999999999999999975 5799999999865432 234678999999999999999999999973 457
Q ss_pred eeEEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
.++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999987632 234589999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCC---------ccccccccCccCccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhh
Q 003780 652 RLLDSDSSN---------RTIVAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 652 ~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~ 719 (796)
......... .....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||....... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~---- 254 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---D---- 254 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---S----
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---c----
Confidence 764321111 11234799999999987543 6889999999999999999999987422110 0
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccC
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 778 (796)
............+.. ......+.+++.+||+.||.+|||++|++++|+........
T Consensus 255 ~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 255 SVALAVQNQLSIPQS---PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp CHHHHHHCC--CCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred hhhHHhhccCCCCcc---ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 011111111111111 11123488999999999999999999999999998765543
No 189
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=347.04 Aligned_cols=260 Identities=23% Similarity=0.304 Sum_probs=197.1
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++..++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 46899999999999999999975 57999999999765433 233567899999999999999999999998653
Q ss_pred -eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 78999998763 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CCCc----
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SPSS---- 715 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~~~---- 715 (796)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+..
T Consensus 175 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9875432 334568999999999877 678999999999999999999999997432100 0000
Q ss_pred ----hhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 716 ----DQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 716 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.........+..................+.+++.+||+.||++|||++|+++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 000000001111111111111122234578999999999999999999999984
No 190
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-39 Score=357.34 Aligned_cols=246 Identities=16% Similarity=0.154 Sum_probs=192.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHH---HHHhhcCCCceeeEE-------eE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEA---HVLSKIAHRNIVKLY-------GF 566 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~hpniv~l~-------~~ 566 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999986 46999999999865444444467899999 455566899999998 66
Q ss_pred EEecc-----------------eeeEEEeeccCCcHHHHHhhcCc----ccccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 003780 567 CLHKK-----------------CMFLIYKYMKRGSLFCFLRNDYE----AVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625 (796)
Q Consensus 567 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 625 (796)
+..++ ..++||||+ +|+|.+++..... ...+++..+..++.||++||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 278999999 6899999986421 12344688889999999999999999 99
Q ss_pred EEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccC-----------CcCcchhHHHHHHHH
Q 003780 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-----------VVTEKCDVYSFGVVA 694 (796)
Q Consensus 626 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DVwSlGv~l 694 (796)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 2334557 999999999887 899999999999999
Q ss_pred HHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 695 LEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 695 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
|||++|+.||......... .... ... .. ....+.+++.+||+.||++|||+.|++++
T Consensus 304 ~elltg~~Pf~~~~~~~~~--------~~~~-~~~-~~-------~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGS--------EWIF-RSC-KN-------IPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHSSCCC------CCS--------GGGG-SSC-CC-------CCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHCCCCCcccccccch--------hhhh-hhc-cC-------CCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999999743321110 0111 111 11 12247789999999999999999999986
No 191
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-38 Score=340.93 Aligned_cols=257 Identities=27% Similarity=0.408 Sum_probs=203.6
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEE--EEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceee
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVV--ALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~v--avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 574 (796)
++|++.+.||+|+||.||+|+.+ +++.+ |+|++...... ...+.+.+|+++++++ +||||+++++++..++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch--HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 67999999999999999999754 56644 99988754322 2246789999999999 8999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcC-------------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC
Q 003780 575 LIYKYMKRGSLFCFLRNDY-------------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL 641 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 641 (796)
+||||+++|+|.+++.... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997653 224589999999999999999999999 999999999999999999
Q ss_pred cEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhH
Q 003780 642 EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIM 720 (796)
Q Consensus 642 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (796)
.+||+|||+++..... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... .. .
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~-~ 249 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CA-E 249 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HH-H
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------HH-H
Confidence 9999999999753321 12233457889999999988889999999999999999998 999987321 11 1
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
....+.......... .....+.+++.+||+.||++|||++|++++|++..
T Consensus 250 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 250 LYEKLPQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHHHGGGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 222222222211111 12234789999999999999999999999998654
No 192
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.7e-38 Score=360.44 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=200.5
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||+||+|+.+ +++.||+|++......... .+.+.+|+.++++++||||+++++++..+...++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS-NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CT-THHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchH-HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 457999999999999999999764 7899999999866533222 45789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC---CcEEEeeeccccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTARL 653 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~ 653 (796)
|||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.. +.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999887653 389999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCcc
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPV 733 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (796)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .......+.........
T Consensus 189 ~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--------DQEILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCCS
T ss_pred CCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCc
Confidence 65432 233456999999999876 468999999999999999999999997321 12222333332222111
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 734 DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 734 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.. .......+.+++.+||+.||.+|||+.|+++|
T Consensus 259 ~~-~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 PE-WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GG-GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred hh-cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11 11223347899999999999999999999987
No 193
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-38 Score=371.63 Aligned_cols=329 Identities=22% Similarity=0.225 Sum_probs=233.8
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++.+++..+ ..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 578999999999986554 4589999999999999999998899999999999999999999988899999999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCC-CCCccccCCCCccEEEcccccccCcchhhhcCCC-------------
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHG-PIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLK------------- 217 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------------- 217 (796)
|++|++++..|..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..+..++.++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998877889999999999999999986 5688999999999999999988876554333222
Q ss_pred --------------------------------------------------------------------------------
Q 003780 218 -------------------------------------------------------------------------------- 217 (796)
Q Consensus 218 -------------------------------------------------------------------------------- 217 (796)
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003780 218 -------------------------------------------------------------------------------- 217 (796)
Q Consensus 218 -------------------------------------------------------------------------------- 217 (796)
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~ 350 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALP 350 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCT
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCC
Confidence
Q ss_pred CccccccCCcccccc--CCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCc-cccccccccccc
Q 003780 218 NLVALNVGGNKLMGP--IPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIP-LELTRLSQLLYL 294 (796)
Q Consensus 218 ~L~~L~l~~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L 294 (796)
+|++|++++|++++. .|..+..+++|++|+|++|.+++ +|..+..+++|+.|++++|++++..| ..+.++++|++|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 222222222222222 12333334444444444444442 34455566666666666666666555 456666677777
Q ss_pred cccCccccCccccccccccccceeccccccccc-CCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEeccccc
Q 003780 295 SISSNMLSGQIPITIAGLISLKGLDLSNNKLSG-PIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKL 372 (796)
Q Consensus 295 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l 372 (796)
++++|.+++..|..+.++++|++|++++|++++ .+|..++.+++|+.|+|++|++++..|..+ .+++|++|++++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 777777766666667777777777777777766 356667777777777777777776666655 366777777777777
Q ss_pred CCCCCcccc---ccccccccCCCCcccCCCCCCC
Q 003780 373 NGTIPPFLY---HRFPLDLSYNDLEGEIPDYFRD 403 (796)
Q Consensus 373 ~~~~p~~~~---~~~~l~l~~N~l~~~~p~~~~~ 403 (796)
++.+|..+. ++..|++++|+++ .+|..+..
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~ 542 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQH 542 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGG
T ss_pred CCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhh
Confidence 766665543 3456777777776 34444433
No 194
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-38 Score=341.22 Aligned_cols=259 Identities=26% Similarity=0.381 Sum_probs=204.1
Q ss_pred hcCCccceeeecccceeEEEEEc------cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL------PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 571 (796)
.++|++.+.||+|+||.||+|+. .+++.||||++...... .....+.+|+.++++++||||+++++++..++
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch--hhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46899999999999999999974 35778999999754432 22457899999999999999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCc----ccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEE
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYE----AVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAF 644 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~k 644 (796)
..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999986532 14588999999999999999999999 9999999999999994 44699
Q ss_pred EeeeccccccCCCCC--CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHH
Q 003780 645 VADFGTARLLDSDSS--NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (796)
|+|||+++....... ......|++.|+|||.+.+..++.++||||||+++|+|++ |+.||.... .. ..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~-~~ 254 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQ-EV 254 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HH-HH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--------HH-HH
Confidence 999999986543322 2233457889999999998899999999999999999998 999986321 11 12
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...+.......... .....+.+++.+||+.||++||+++|++++++...
T Consensus 255 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 255 LEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 22222221111111 12234789999999999999999999999998653
No 195
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=342.81 Aligned_cols=256 Identities=24% Similarity=0.413 Sum_probs=198.4
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcE----EEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKV----VALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
.++|++.+.||+|+||.||+|+.. +++. ||+|.+...... ...+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC--CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 367999999999999999999753 4544 577777544322 22468899999999999999999999998765
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++|+||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 7899999999999999986532 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 653 LLDSDSSN--RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 653 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
........ .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ......+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---------~~~~~~~~~~~ 236 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA---------SEISSILEKGE 236 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG---------GGHHHHHHTTC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH---------HHHHHHHHcCC
Confidence 76543222 223346778999999999999999999999999999999 9999874321 11222222222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
...... .....+.+++.+||+.||++||++.|+++.|+...
T Consensus 237 ~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 237 RLPQPP---ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp CCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCc---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 222211 12234788999999999999999999999998754
No 196
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.9e-39 Score=334.93 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=199.1
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-ceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-KCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.+ |+.||+|++..... .+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhH-----HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 468999999999999999999874 88999999975532 35789999999999999999999997654 478999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.+.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999997642 23378899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccch
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDR 735 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (796)
. .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... . .....+..........
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~-~~~~~~~~~~~~~~~~ 237 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------K-DVVPRVEKGYKMDAPD 237 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--------G-GHHHHHTTTCCCCCCT
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------H-HHHHHHhcCCCCCCcc
Confidence 2 223357889999999998889999999999999999998 9999873221 1 1112222222221111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 736 MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 736 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.....+.+++.+||+.||++|||+.|+++.|+....
T Consensus 238 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 238 ---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 122347899999999999999999999999987643
No 197
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-39 Score=349.36 Aligned_cols=255 Identities=27% Similarity=0.404 Sum_probs=192.4
Q ss_pred CCccceeeecccceeEEEEEcc--C--CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-cceee
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP--N--GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH-KKCMF 574 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~--~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~ 574 (796)
.|++.+.||+|+||.||+|... + +..||+|.+...... ...+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS--HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4677889999999999999753 2 246899998754332 335689999999999999999999999754 56789
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999997543 3478899999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC----CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 655 DSDSS----NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 655 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
..... ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||...... . ..........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~---~~~~~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----D---ITVYLLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----C---HHHHHHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----H---HHHHHHcCCC
Confidence 43321 1223457788999999999999999999999999999999 66777633211 1 1111111111
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..... .....+.+++.+||+.||++|||++|++++|++..
T Consensus 315 -~~~p~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 315 -LLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp -CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 11234789999999999999999999999998754
No 198
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=335.71 Aligned_cols=258 Identities=25% Similarity=0.322 Sum_probs=202.8
Q ss_pred CCccceeeecccceeEEEEEcc-C---CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee-e
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLP-N---GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM-F 574 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~ 574 (796)
.|...+.||+|+||+||+|... + +..||+|++...... ...+.+.+|+.++++++||||+++++++..++.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM--QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4566789999999999999743 2 337999999764432 2356889999999999999999999999876655 9
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+|+||+.+|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999997632 3478999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC----CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDS----SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
.... .......+++.|+|||.+.+..++.++||||+|+++|+|++|..|+.... ........+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~--------~~~~~~~~~~~~~~ 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI--------DPFDLTHFLAQGRR 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--------CGGGHHHHHHTTCC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC--------CHHHHHHHhhcCCC
Confidence 4321 22233457889999999999999999999999999999999666643111 11112222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
..... .....+.+++.+|++.||++|||++|+++.|++....
T Consensus 247 ~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 247 LPQPE---YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCc---cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111 1123478999999999999999999999999886543
No 199
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4e-39 Score=352.23 Aligned_cols=258 Identities=10% Similarity=0.037 Sum_probs=185.5
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc--CCCceeeEE-------eEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI--AHRNIVKLY-------GFC 567 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~-------~~~ 567 (796)
..+|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345889999999999999999754 7999999999987654445566788886555444 699988755 455
Q ss_pred Eec-----------------ceeeEEEeeccCCcHHHHHhhcCcccccCHHHH------HHHHHHHHHHHHHHhhcCCCC
Q 003780 568 LHK-----------------KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMR------VNIIKCVANALSYLHHDCMPS 624 (796)
Q Consensus 568 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~ 624 (796)
..+ ...++||||++ |+|.+++..... .+++..+ ..++.||++||+|||++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 433 33799999999 899999986422 2344555 77889999999999999 9
Q ss_pred eEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCC
Q 003780 625 IVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRH 702 (796)
Q Consensus 625 ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~ 702 (796)
|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999865432 213457799999999987 679999999999999999999999
Q ss_pred CCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 703 PGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 703 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
||............ ..............+. .......+.+++.+||+.||++|||++|+++|
T Consensus 292 Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIKGSWK-RPSLRVPGTDSLAFGS---CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCTTCCC-BCCTTSCCCCSCCCTT---SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccccchh-hhhhhhccccccchhh---ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99854321110000 0000000011111110 01123357899999999999999999999876
No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-38 Score=355.82 Aligned_cols=278 Identities=17% Similarity=0.242 Sum_probs=218.9
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC-CceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-RNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|.. .+++.||||++...... +++.+|+++++.++| +++..+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 46899999999999999999975 57999999987755432 357889999999986 566677777778889999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---cCCCcEEEeeecccc
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL---NSKLEAFVADFGTAR 652 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~ 652 (796)
||||+ +++|.+++.... ..+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 999999997543 2489999999999999999999999 99999999999999 688999999999998
Q ss_pred ccCCCCCC-------ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhh
Q 003780 653 LLDSDSSN-------RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVL 725 (796)
Q Consensus 653 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (796)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~ 229 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKIS 229 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-----SHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-----hHHHHHHHHh
Confidence 76543321 12456999999999999999999999999999999999999999753321 1111122221
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccCccccccHHHHhhh
Q 003780 726 DSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVNPFEEISIWQLRNQ 791 (796)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~ 791 (796)
.................++.+++..||+.||++||++++|++.|+........++...-+|+....
T Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~ 295 (483)
T 3sv0_A 230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (483)
T ss_dssp HHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC
T ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcc
Confidence 111111111111122345889999999999999999999999998877666667777777776543
No 201
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-38 Score=335.77 Aligned_cols=259 Identities=27% Similarity=0.376 Sum_probs=201.5
Q ss_pred hcCCccceeeecccceeEEEEEccC----CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE-ecce
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN----GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL-HKKC 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~ 572 (796)
..+|++.+.||+|+||.||+|...+ +..+|+|.+...... ...+.+.+|+.++++++||||+++++++. .++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH--HHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 3568889999999999999997542 336899998764432 23568899999999999999999999865 4567
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999997543 3478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 653 LLDSDS----SNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG-RHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 653 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
...... .......+|+.|+|||.+.+..++.++||||+|+++|+|++| ..||..... ..........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------~~~~~~~~~~ 248 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------FDITVYLLQG 248 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--------TTHHHHHHTT
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhcC
Confidence 664322 112334577889999999998999999999999999999995 555543211 1111111111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCcc
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIA 775 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 775 (796)
........ ....+.+++.+|++.||++|||++|+++.|++....
T Consensus 249 ~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 249 RRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11111111 123478999999999999999999999999886543
No 202
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.5e-38 Score=346.31 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=204.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCH--HHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 367999999999999999999765 7899999999866432 2356889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999998653 3889999999999999999999832 899999999999999999999999999976532
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCC-------------------------
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS------------------------- 711 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~------------------------- 711 (796)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 1223568999999999999999999999999999999999999987422100
Q ss_pred ---------CCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 712 ---------SPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 712 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
....................... ......+.+++.+||+.||++|||++|+++|-.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT---TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc---ccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 00000000111111111111110 011234889999999999999999999999853
No 203
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.4e-38 Score=333.13 Aligned_cols=257 Identities=25% Similarity=0.323 Sum_probs=207.1
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccc------hhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAET------EETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCL 568 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 568 (796)
..++|++.+.||+|+||.||+|..+ +|+.||||++..... ......+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999764 689999999976531 11223467889999999996 999999999999
Q ss_pred ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 569 HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 569 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
.++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999998643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccCccCccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAY------TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
|.+....... ......|++.|+|||++. ...++.++||||||+++|+|++|+.||.... ......
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~ 239 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLR 239 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHHHH
Confidence 9998765432 233456899999999875 4567889999999999999999999986321 112222
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............ ........+.+++.+||+.||++|||++|++++-
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 240 MIMSGNYQFGSP-EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp HHHHTCCCCCTT-TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHhcCCcccCcc-cccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence 222222221111 0112234588999999999999999999998753
No 204
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=342.40 Aligned_cols=258 Identities=24% Similarity=0.385 Sum_probs=199.4
Q ss_pred HHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEe-
Q 003780 493 DIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLH- 569 (796)
Q Consensus 493 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~- 569 (796)
++....++|++.+.||+|+||.||+|+. .+|+.||+|++...... .+.+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344578899999999999999999975 57999999999765432 35788999999999 79999999999987
Q ss_pred -----cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEE
Q 003780 570 -----KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 570 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 644 (796)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 468899999999999999998653 24588999999999999999999999 999999999999999999999
Q ss_pred EeeeccccccCCCCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhh
Q 003780 645 VADFGTARLLDSDSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKI 719 (796)
Q Consensus 645 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~ 719 (796)
|+|||++..............|++.|+|||++. +..++.++|||||||++|+|++|+.||..... ..
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~ 241 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--------MR 241 (326)
T ss_dssp ECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HH
T ss_pred EeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HH
Confidence 999999987654433334456999999999987 56688999999999999999999999863221 11
Q ss_pred HHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 720 MLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
................ .....+.+++.+||+.||++||+++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 242 ALFLIPRNPAPRLKSK---KWSKKFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp HHHHHHHSCCCCCSCS---CSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred HHHHhhcCccccCCcc---ccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 1111211111111111 1123478999999999999999999999974
No 205
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.4e-38 Score=341.03 Aligned_cols=257 Identities=24% Similarity=0.310 Sum_probs=197.6
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccch-----hhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETE-----ETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 456899999999999999999975 46899999999765321 112234588999999999999999999998765
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~D 647 (796)
. .++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 899999999999999987543 489999999999999999999999 9999999999999987664 99999
Q ss_pred eccccccCCCCCCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
||+++..... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||...... . .....
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~----~~~~~ 231 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----V----SLKDQ 231 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----S----CHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----H----HHHHH
Confidence 9999876432 1223456899999999864 566889999999999999999999998743211 0 11111
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+..................+.+++.+||+.||++||+++|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 111111111111112234578999999999999999999999763
No 206
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-39 Score=346.70 Aligned_cols=259 Identities=25% Similarity=0.342 Sum_probs=203.9
Q ss_pred hcCCccceeeecccceeEEEEEc----cCCcEEEEEEeccccch-hhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecc
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL----PNGKVVALKKLHRAETE-ETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKK 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 571 (796)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... .....+.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 37899999999764321 111234577899999999 6999999999999999
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999998653 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC-CCccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 652 RLLDSDS-SNRTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 652 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
+...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~ 282 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE 282 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccC
Confidence 8654322 22234569999999999885 34788999999999999999999999743221 11111222222222
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhh
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRP-----TMQRVCQEFLT 771 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~ 771 (796)
.... . .....+.+++.+||+.||++|| +++|++++..-
T Consensus 283 ~~~~-~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 283 PPYP-Q----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp CCCC-T----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred CCCC-c----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 1111 1 1123477899999999999999 99999988643
No 207
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=347.53 Aligned_cols=252 Identities=14% Similarity=0.153 Sum_probs=202.8
Q ss_pred HhcCCccceeeecccceeEEEEE------ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC---CCceeeEEeEE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQ------LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA---HRNIVKLYGFC 567 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~ 567 (796)
..++|.+.+.||+|+||+||+|. ..+++.||+|++.... ..++..|++++++++ |+||+++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 35689999999999999999993 4568999999997653 236777888888886 99999999999
Q ss_pred EecceeeEEEeeccCCcHHHHHhhcC--cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC------
Q 003780 568 LHKKCMFLIYKYMKRGSLFCFLRNDY--EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS------ 639 (796)
Q Consensus 568 ~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~------ 639 (796)
..++..++||||+++|+|.++++... ....+++..+..++.||++||+|||+. +|+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999997532 234599999999999999999999999 9999999999999998
Q ss_pred -----CCcEEEeeeccccccCCC--CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCC
Q 003780 640 -----KLEAFVADFGTARLLDSD--SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSS 712 (796)
Q Consensus 640 -----~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~ 712 (796)
++.+||+|||+|+.+... ........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-- 291 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-- 291 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT--
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC--
Confidence 899999999999765422 22334467999999999999999999999999999999999999998643221
Q ss_pred CCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhhcCc
Q 003780 713 PSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFR-PTMQRVCQEFLTCKI 774 (796)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~ 774 (796)
.. ......... .....+.+++..|++.+|.+| |+++++.+.|+....
T Consensus 292 --~~-------~~~~~~~~~------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 292 --EC-------KPEGLFRRL------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp --EE-------EECSCCTTC------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred --ce-------eechhcccc------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 00 011111111 112346689999999999998 678888877776544
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.2e-38 Score=343.19 Aligned_cols=261 Identities=21% Similarity=0.239 Sum_probs=193.7
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK----- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 571 (796)
.++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCCh-HHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 46899999999999999999965 478999999997654332 33567889999999999999999999997665
Q ss_pred -eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 78888753 278999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC----------CCCCchh---
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL----------SSPSSDQ--- 717 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~----------~~~~~~~--- 717 (796)
++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ..+....
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9866432 2233456999999999999999999999999999999999999999743210 0000000
Q ss_pred -hhHHHHhhcCCC---------------CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 -KIMLIDVLDSRL---------------SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 -~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............ .+............+.+++.+||+.||++|||++|+++|-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000000000 0001111122245688999999999999999999999985
No 209
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.1e-38 Score=342.64 Aligned_cols=261 Identities=23% Similarity=0.301 Sum_probs=200.6
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe-------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------- 569 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 569 (796)
.++|++.+.||+|+||.||+|+. .+|+.||+|++........ ....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS-SCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc-chHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 36899999999999999999976 5799999999976654332 23567899999999999999999999987
Q ss_pred -cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeee
Q 003780 570 -KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADF 648 (796)
Q Consensus 570 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 648 (796)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999985 7777776543 2489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCC----CCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHH
Q 003780 649 GTARLLDSDS----SNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLID 723 (796)
Q Consensus 649 g~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (796)
|+++.+.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~ 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-----QHQLALISQ 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHH
Confidence 9998765321 22234568999999998876 4579999999999999999999999874221 111111111
Q ss_pred hhcCCCCCccc------------------hhhHH------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 724 VLDSRLSPPVD------------------RMVMQ------DIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 724 ~~~~~~~~~~~------------------~~~~~------~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
........... ..... ....+.+++.+||+.||++|||++|+++|-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 11110000000 00000 1234789999999999999999999999843
No 210
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.4e-38 Score=364.60 Aligned_cols=326 Identities=18% Similarity=0.189 Sum_probs=247.8
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
..++.|+++++.+++.. +..|+.+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 47899999999998654 44699999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCcc--ccccCCccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLV--ALNVGGNKL 229 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~l~~N~l 229 (796)
|++|++++..|..+.++++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..++.+++|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999988788999999999999999999986555555699999999999999999999999999998 888999988
Q ss_pred cccCCCccccc---------------------------------------------------CccceEEeccccccccCC
Q 003780 230 MGPIPSTLFRL---------------------------------------------------TNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 230 ~~~~~~~l~~l---------------------------------------------------~~L~~L~L~~N~l~~~~p 258 (796)
++..|..+... .+|+.|++++|.+++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87666544321 046666666666666556
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCc-ccCCCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPP-EIGKCS 337 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~ 337 (796)
..|.++++|+.|++++|+++ .+|..+.++++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 66666777777777777766 5566666667777777777776666666666666666666666666654443 366666
Q ss_pred CCcEEEeecccccCCC--Cccc-cccccceEEecccccCCCCCccc---cccccccccCCCCcccCCC
Q 003780 338 ELRNITLRNNNLSGSI--PPEI-GLMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPD 399 (796)
Q Consensus 338 ~L~~L~L~~N~l~~~~--~~~~-~~~~L~~L~l~~N~l~~~~p~~~---~~~~~l~l~~N~l~~~~p~ 399 (796)
+|+.|++++|++++.. +..+ .+++|++|++++|++++..|..+ .++..|++++|.+++..|.
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 418 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTC
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccc
Confidence 6666666666666543 3333 35566666666666665555433 3344566666666655443
No 211
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=368.53 Aligned_cols=260 Identities=23% Similarity=0.358 Sum_probs=203.3
Q ss_pred cCCccce-eeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 499 EDFDIKY-CIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 499 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
+++.+.+ .||+|+||.||+|..+ ++..||||+++..... ...+.+.+|++++++++||||+++++++.. +..+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 3444445 7999999999999653 5678999999865332 224689999999999999999999999976 5689
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 412 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999999999999997542 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 655 DSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 655 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... . .+...+.....
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~-~~~~~i~~~~~ 557 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------P-EVMAFIEQGKR 557 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--------H-HHHHHHHTTCC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--------H-HHHHHHHcCCC
Confidence 543221 112335688999999998999999999999999999998 9999874221 1 12222222222
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccccC
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIALVN 778 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 778 (796)
..... .....+.+++.+||+.||++||+++++++.|+........
T Consensus 558 ~~~p~---~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 558 MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 22111 1233588999999999999999999999999886554433
No 212
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=343.01 Aligned_cols=268 Identities=24% Similarity=0.359 Sum_probs=198.2
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHH--HhhcCCCceeeEEeEEEe-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHV--LSKIAHRNIVKLYGFCLH-----K 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~-----~ 570 (796)
.++|++.+.||+|+||.||+|+. +++.||||++..... +.+..|.++ +..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch------hhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46899999999999999999976 689999999975432 233444444 556899999999986643 2
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC------CCCeEEecCCCCCeEecCCCcEE
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC------MPSIVHRDISSNNILLNSKLEAF 644 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~dlkp~NIll~~~~~~k 644 (796)
...++||||+++|+|.+++.... .++..+..++.|+++||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 36789999999999999997643 588899999999999999999863 33899999999999999999999
Q ss_pred EeeeccccccCCCC--------CCccccccccCccCcccccc-------CCcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 003780 645 VADFGTARLLDSDS--------SNRTIVAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLMGRHPGELLSS 709 (796)
Q Consensus 645 l~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~ 709 (796)
|+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|..|+.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765321 11223469999999999886 4567799999999999999999877643222
Q ss_pred CCCCCch----------hhhHHHHhhcCCCCCccch---hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 710 LSSPSSD----------QKIMLIDVLDSRLSPPVDR---MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 710 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
....... ..............+.... ........+.+++.+||+.||++|||++|+++.|++....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1111000 0000111111111111111 11223446889999999999999999999999998865433
No 213
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.2e-38 Score=368.07 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=199.1
Q ss_pred eeeecccceeEEEEEc---cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEEEeecc
Q 003780 505 YCIGTGGYGSVYKAQL---PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
+.||+|+||.||+|.+ +.++.||||+++...... ...+++.+|++++++++|||||++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-ALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCG-GGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999954 346889999997654332 335689999999999999999999999964 56889999999
Q ss_pred CCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCC--
Q 003780 582 RGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSS-- 659 (796)
Q Consensus 582 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 659 (796)
+|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999997643 489999999999999999999999 999999999999999999999999999987654322
Q ss_pred -CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhh
Q 003780 660 -NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMV 737 (796)
Q Consensus 660 -~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (796)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+..........
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---------~~~~~~i~~~~~~~~p~-- 595 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---------SEVTAMLEKGERMGCPA-- 595 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HHHHHHHHTTCCCCCCT--
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHcCCCCCCCC--
Confidence 1223346788999999999999999999999999999998 9999873221 12222232222222211
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 738 MQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 738 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.....+.+++.+||+.||++||++++|++.|+....
T Consensus 596 -~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 596 -GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 122347899999999999999999999999987543
No 214
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-38 Score=368.00 Aligned_cols=337 Identities=22% Similarity=0.240 Sum_probs=240.2
Q ss_pred CccCCceeeCCC------------CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEee
Q 003780 60 HCKLDGVTCNTA------------RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLD 127 (796)
Q Consensus 60 ~C~w~gv~C~~~------------~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (796)
.|.|.|| |+.. .+++.|+++++++++..+ ..|..+++|++|+|++|.+.+..|..|+++++|++||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4999998 8642 368999999999886554 3589999999999999999999889999999999999
Q ss_pred cccCcCCCCCCCCCCCCCCCCEEEecCCCCCC-CCchhhhccCccceeeccccccC-CCCCccccCCCCccEEEcccccc
Q 003780 128 FSFNNLTGSIPPELGSLRNLEVLNLKGNNLNG-AIPSSLCQLTKLITMALSRNGLH-GPIPSAIGDLNNLLILSLDSNKL 205 (796)
Q Consensus 128 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l 205 (796)
|++|.+++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|.+. ...+..|.++++|++|++++|.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999998777779999999999999999986 35778899999999999999844 44446888999999999999999
Q ss_pred cCcchhhhcC------------------------CCCccccccCCccccccC--CCcc----------------------
Q 003780 206 SGMLHQELGK------------------------LKNLVALNVGGNKLMGPI--PSTL---------------------- 237 (796)
Q Consensus 206 ~~~~~~~~~~------------------------l~~L~~L~l~~N~l~~~~--~~~l---------------------- 237 (796)
++..|..++. +++|++|++++|++++.. |..+
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 8877777665 455666666666665421 0000
Q ss_pred -------c-----------------------------------------------------------ccCccceEEeccc
Q 003780 238 -------F-----------------------------------------------------------RLTNLTYLYLHSN 251 (796)
Q Consensus 238 -------~-----------------------------------------------------------~l~~L~~L~L~~N 251 (796)
. ..++|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 0 0122333444444
Q ss_pred cccccCCccc-cCCcccceeecccccccccCcc---ccccccccccccccCccccCccc--cccccccccceeccccccc
Q 003780 252 HLNGSIPPEI-GNMTGILKVDMSMNNIEGTIPL---ELTRLSQLLYLSISSNMLSGQIP--ITIAGLISLKGLDLSNNKL 325 (796)
Q Consensus 252 ~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l 325 (796)
+++ .+|..+ ..+++|+.|+|++|++++.+|. .++.+++|++|++++|++++..+ ..+..+++|++|+|++|++
T Consensus 321 ~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 321 KVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp CCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred ccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 443 344333 3577777888888887776543 36677778888888887775432 4577778888888888888
Q ss_pred ccCCCcccCCCCCCcEEEeecccccCCCCccc-------------------cccccceEEecccccCCCCCcc--ccccc
Q 003780 326 SGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-------------------GLMKLEYLDLSHNKLNGTIPPF--LYHRF 384 (796)
Q Consensus 326 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-------------------~~~~L~~L~l~~N~l~~~~p~~--~~~~~ 384 (796)
+ .+|..+..+++|+.|+|++|++++. |..+ .+++|++|+|++|+++ .+|.. +.++.
T Consensus 400 ~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~ 476 (549)
T 2z81_A 400 H-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDASLFPVLL 476 (549)
T ss_dssp C-CCCSCCCCCTTCCEEECTTSCCSCC-CTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCGGGCTTCC
T ss_pred c-cCChhhcccccccEEECCCCCcccc-cchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCcccCccCC
Confidence 7 5677777777777777777777632 2211 3456666666666665 45532 33455
Q ss_pred cccccCCCCcccCCCCCC
Q 003780 385 PLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 385 ~l~l~~N~l~~~~p~~~~ 402 (796)
.|||++|++++.+|..|.
T Consensus 477 ~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 477 VMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp EEECCSSCCCCCCTTGGG
T ss_pred EEecCCCccCCcCHHHHh
Confidence 667777777766665443
No 215
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-38 Score=337.52 Aligned_cols=256 Identities=23% Similarity=0.342 Sum_probs=200.1
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|..+ +++.||+|++....... .+.+.+|++++++++||||+++++++..++..++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC---HHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH---HHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 3568999999999999999999765 68999999987654322 4678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999987532 2489999999999999999999999 99999999999999999999999999976432
Q ss_pred CCCCCccccccccCccCcccc-----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELA-----YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
..........||+.|+|||++ .+..++.++||||||+++|+|++|+.||..... .............
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~ 240 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSDPP 240 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSCCC
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHHHHHHhccCCc
Confidence 221122334689999999988 466788999999999999999999999874221 1112222222211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.... .......+.+++.+||+.||++|||++|++++-.
T Consensus 241 ~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 278 (302)
T 2j7t_A 241 TLLT--PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278 (302)
T ss_dssp CCSS--GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred ccCC--ccccCHHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence 1110 1122335789999999999999999999998743
No 216
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=337.25 Aligned_cols=265 Identities=23% Similarity=0.363 Sum_probs=208.0
Q ss_pred hcCCccceeeecccceeEEEEEc-----cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecc-
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-----PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKK- 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~- 571 (796)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS---HHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 35789999999999999999973 4689999999976533 23568999999999999999999999987654
Q ss_pred -eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 572 -CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 572 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 7899999999999999998653 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc-------CCCCCchhhhH
Q 003780 651 ARLLDSDSSN---RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSS-------LSSPSSDQKIM 720 (796)
Q Consensus 651 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~-------~~~~~~~~~~~ 720 (796)
++........ .....++..|+|||.+.+..++.++||||||+++|||+||..|+..... ...........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9876543321 1223467789999999988899999999999999999999999763210 00000111111
Q ss_pred HHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcC
Q 003780 721 LIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCK 773 (796)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 773 (796)
..+.+......+... .....+.+++.+||+.||++|||+.|+++.|++..
T Consensus 272 ~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 272 LIELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222333222222111 12235889999999999999999999999998764
No 217
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=341.02 Aligned_cols=255 Identities=23% Similarity=0.346 Sum_probs=188.1
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEE-------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCL------- 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~------- 568 (796)
..+|++.+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|+.++.++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE---KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHH---HHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchH---HHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 45799999999999999999975 47999999998655332 2467899999999996 999999999994
Q ss_pred -ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEecCCCcEEE
Q 003780 569 -HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPS--IVHRDISSNNILLNSKLEAFV 645 (796)
Q Consensus 569 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl 645 (796)
.....++||||+. |+|.+++........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3445899999996 79999887644445699999999999999999999998 7 999999999999999999999
Q ss_pred eeeccccccCCCCCC------------ccccccccCccCcccc---ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC
Q 003780 646 ADFGTARLLDSDSSN------------RTIVAGTYGYIAPELA---YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL 710 (796)
Q Consensus 646 ~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~ 710 (796)
+|||+++........ .....||+.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134589999999998 5667889999999999999999999998742211
Q ss_pred CCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 711 SSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
............... ...+.+++.+||+.||++|||++|++++|+....
T Consensus 260 ------------~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 ------------RIVNGKYSIPPHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ------------------CCCCTTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------HhhcCcccCCccccc---chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111111111101 1126689999999999999999999999987653
No 218
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=346.33 Aligned_cols=262 Identities=18% Similarity=0.214 Sum_probs=204.2
Q ss_pred hcCCccceeeecccceeEEEEEccC---------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceee------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPN---------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVK------ 562 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~------ 562 (796)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 3689999999999999999997653 789999998754 25788999999999999987
Q ss_pred ---------EEeEEEe-cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 003780 563 ---------LYGFCLH-KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISS 632 (796)
Q Consensus 563 ---------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 632 (796)
+++++.. ++..++||||+ +++|.+++.... ...+++..+..++.||++||+|||+. +|+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6777776 67889999999 999999998652 24589999999999999999999999 999999999
Q ss_pred CCeEecCCC--cEEEeeeccccccCCCCC-------CccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 003780 633 NNILLNSKL--EAFVADFGTARLLDSDSS-------NRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703 (796)
Q Consensus 633 ~NIll~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p 703 (796)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999987643221 12334699999999999998999999999999999999999999
Q ss_pred CcccccCCCCCchhhhHHHHhhcCCCCCccchh--hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 704 GELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM--VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
|..... ....................... .......+.+++.+||+.||++||+++|+++.|++.....
T Consensus 268 f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 268 WTNCLP----NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TGGGTT----CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cccCCc----CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 984321 11111111111111111111000 0011234889999999999999999999999998765443
No 219
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.4e-38 Score=345.09 Aligned_cols=269 Identities=22% Similarity=0.280 Sum_probs=202.6
Q ss_pred ccHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchh--------hHHHHHHHHHHHHHhhcCCCce
Q 003780 489 IAFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEE--------TTFFNSFQNEAHVLSKIAHRNI 560 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--------~~~~~~~~~E~~~l~~l~hpni 560 (796)
...+++....++|++.+.||+|+||.||+|...+|+.||||++....... ....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34567788899999999999999999999998889999999997643321 2224689999999999999999
Q ss_pred eeEEeEEEe-----cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 003780 561 VKLYGFCLH-----KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNI 635 (796)
Q Consensus 561 v~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 635 (796)
+++++++.. ....++||||++ |+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999999854 336899999998 58888887542 3589999999999999999999999 999999999999
Q ss_pred EecCCCcEEEeeeccccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCC
Q 003780 636 LLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPS 714 (796)
Q Consensus 636 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~ 714 (796)
+++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---- 240 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY---- 240 (362)
T ss_dssp EECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----
T ss_pred EEcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH----
Confidence 9999999999999999754433 22334568999999999876 67899999999999999999999999742210
Q ss_pred chhhhHH--------------------HHhhcCCCCC----ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 715 SDQKIML--------------------IDVLDSRLSP----PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 715 ~~~~~~~--------------------~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.....+ .+........ ............+.+++.+||+.||++|||++|+++|-
T Consensus 241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 318 (362)
T 3pg1_A 241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318 (362)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence 000000 0111111110 11111112234588999999999999999999999984
No 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4e-38 Score=332.00 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=190.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+. .+|+.||+|++........ ..+.+.++...++.++||||+++++++..++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHH-HHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46899999999999999999975 5799999999976644332 234455566668888999999999999999999999
Q ss_pred EeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||++ |+|.+++... .....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 4888777642 12345899999999999999999999853 89999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCcccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELA----YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
... ......||+.|+|||.+ .+..++.++||||+||++|+|++|+.||.... ................
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~ 233 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQLKQVVEEPSPQ 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHHHHHHHHSCCCC
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-------chHHHHHHHhccCCCC
Confidence 432 22334699999999996 56678899999999999999999999987321 1122222233332222
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... .....+.+++.+|++.||++|||++|+++|-
T Consensus 234 ~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 234 LPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHP 268 (290)
T ss_dssp CCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred cccc---cCCHHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence 1111 1123478999999999999999999999863
No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-38 Score=345.36 Aligned_cols=255 Identities=24% Similarity=0.300 Sum_probs=184.4
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------ 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 570 (796)
.++|++.+.||+|+||.||+|. ..+|+.||||++....... ...+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSH-HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4789999999999999999996 4579999999997654332 2356788999999999999999999999754
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
...++|+|++ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 68999888652 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh-----
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV----- 724 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 724 (796)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...
T Consensus 179 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 179 ARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-----DQLKLILRLVGTPG 250 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCC
T ss_pred ccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCC
Confidence 9865432 334568999999999877 67899999999999999999999999743210 000011110
Q ss_pred ------------------hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 ------------------LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 ------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+..................+.+++.+||+.||++|||++|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 011011111111111234578999999999999999999999984
No 222
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=358.23 Aligned_cols=327 Identities=21% Similarity=0.175 Sum_probs=295.0
Q ss_pred eeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCC
Q 003780 66 VTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLR 145 (796)
Q Consensus 66 v~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 145 (796)
-.|... ...+++++++++..... -.++++.|+|++|++.+..+..|.++++|++|+|++|.|++..|..|.+++
T Consensus 7 C~C~~~--~~~v~c~~~~l~~ip~~----~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 80 (477)
T 2id5_A 7 CECSAQ--DRAVLCHRKRFVAVPEG----IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80 (477)
T ss_dssp CEEETT--TTEEECCSCCCSSCCSC----CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CeECCC--CCEEEeCCCCcCcCCCC----CCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCc
Confidence 346543 34688888888754332 236899999999999999999999999999999999999998899999999
Q ss_pred CCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccC
Q 003780 146 NLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVG 225 (796)
Q Consensus 146 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 225 (796)
+|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++++.+..|.++++|+.|+|+
T Consensus 81 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 81 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp TCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred cCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 99999999999998777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcc
Q 003780 226 GNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQI 305 (796)
Q Consensus 226 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 305 (796)
+|++++..+..+.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|++|+|++|.+++..
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 240 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 240 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCC
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccC
Confidence 99999877778999999999999999999988889999999999999999988888888777789999999999999766
Q ss_pred ccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccc---c
Q 003780 306 PITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFL---Y 381 (796)
Q Consensus 306 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~---~ 381 (796)
+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+ .+++|+.|+|++|++++..+..+ .
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 6789999999999999999999889999999999999999999999888877 58999999999999996555443 4
Q ss_pred ccccccccCCCCcccCC
Q 003780 382 HRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 382 ~~~~l~l~~N~l~~~~p 398 (796)
++..|++++|.+.+.-+
T Consensus 321 ~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 321 NLETLILDSNPLACDCR 337 (477)
T ss_dssp GCCEEECCSSCEECSGG
T ss_pred ccCEEEccCCCccCccc
Confidence 56789999999986543
No 223
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=330.04 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=199.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchh-hHHHHHHHHHHHHHhhcCCCceeeEEeEEE--ecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEE-TTFFNSFQNEAHVLSKIAHRNIVKLYGFCL--HKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~ 572 (796)
..++|.+.+.||+|+||.||+|... +++.||+|++....... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3478999999999999999999764 68999999997654322 223467899999999999999999999984 4568
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||++++ +.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999986 777776543 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC--CCccccccccCccCccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCC
Q 003780 653 LLDSDS--SNRTIVAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSR 728 (796)
Q Consensus 653 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (796)
...... .......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||.... .......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIGKGS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHhcCC
Confidence 765322 2223456899999999987643 4779999999999999999999987321 111222222222
Q ss_pred CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 729 LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 729 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... . .....+.+++.+|++.||++|||++|++++-
T Consensus 230 ~~~~-~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 230 YAIP-G----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp CCCC-S----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred CCCC-C----ccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 1111 1 1123477899999999999999999999874
No 224
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-38 Score=370.33 Aligned_cols=322 Identities=19% Similarity=0.278 Sum_probs=285.4
Q ss_pred CCeEEEeCCCCCcccc-----------------ccccccC--CCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCc
Q 003780 72 RSIIEINLPEKKLKGE-----------------LSQFNFS--CFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN 132 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~-----------------~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 132 (796)
.++..|+|+++.++|. ++. .++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 5788999999999995 554 366 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCCCCCCC------CCCCEEEecCCCCCCCCch--hhhccCccceeeccccccCCCCCccccCCCCccEEEccc
Q 003780 133 -LTG-SIPPELGSL------RNLEVLNLKGNNLNGAIPS--SLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDS 202 (796)
Q Consensus 133 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 202 (796)
+++ .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .|+.+++|++|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 889888877 99999999999999 7888 99999999999999999998899 999999999999999
Q ss_pred ccccCcchhhhcCCCC-ccccccCCccccccCCCcccccC--ccceEEeccccccccCCcccc-------CCcccceeec
Q 003780 203 NKLSGMLHQELGKLKN-LVALNVGGNKLMGPIPSTLFRLT--NLTYLYLHSNHLNGSIPPEIG-------NMTGILKVDM 272 (796)
Q Consensus 203 N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~L 272 (796)
|+++ .+|..+.++++ |++|++++|+++ .+|..+..++ +|++|++++|++++.+|..+. .+++|+.|+|
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 9999 77788999999 999999999999 7788887755 899999999999999999888 8889999999
Q ss_pred ccccccccCccccccccccccccccCccccCcccc-ccccc-------cccceecccccccccCCCcccC--CCCCCcEE
Q 003780 273 SMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPI-TIAGL-------ISLKGLDLSNNKLSGPIPPEIG--KCSELRNI 342 (796)
Q Consensus 273 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~-~~~~l-------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L 342 (796)
++|++++..+..+..+++|++|+|++|.++ .+|. .+... ++|++|+|++|+++ .+|..+. .+++|+.|
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L 518 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGI 518 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEE
Confidence 999999655555667999999999999999 4554 44433 39999999999999 6888887 99999999
Q ss_pred EeecccccCCCCccc-cccccceEEe------cccccCCCCCccccc---cccccccCCCCcccCCCCCC
Q 003780 343 TLRNNNLSGSIPPEI-GLMKLEYLDL------SHNKLNGTIPPFLYH---RFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 343 ~L~~N~l~~~~~~~~-~~~~L~~L~l------~~N~l~~~~p~~~~~---~~~l~l~~N~l~~~~p~~~~ 402 (796)
+|++|++++ +|..+ .+++|+.|+| ++|++.+.+|..+.. +..|+|++|.+ +.+|..+.
T Consensus 519 ~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~ 586 (636)
T 4eco_A 519 DLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT 586 (636)
T ss_dssp ECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred ECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh
Confidence 999999998 77666 5899999999 568889999977644 56899999999 78888655
No 225
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.1e-38 Score=333.21 Aligned_cols=255 Identities=22% Similarity=0.364 Sum_probs=201.9
Q ss_pred HhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC--CCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA--HRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||++..++++.||||++....... ...+.+.+|++++++++ ||||+++++++..++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCH-HHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccc-cchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 456899999999999999999998889999999997654432 23568899999999997 599999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
+||| +.+++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++..
T Consensus 105 lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 9999 67889999998653 488999999999999999999999 9999999999999965 89999999999876
Q ss_pred CCCCCC--ccccccccCccCcccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 655 DSDSSN--RTIVAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 655 ~~~~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
...... .....|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.... ......
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~ 249 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKL 249 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-------HHHHHH
Confidence 543221 233568999999999875 468889999999999999999999987321 112223
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
....+........... ...+.+++.+||+.||++||+++|++++-.
T Consensus 250 ~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 250 HAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHhcccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 3344433332222211 234778999999999999999999998753
No 226
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.7e-38 Score=329.01 Aligned_cols=256 Identities=25% Similarity=0.347 Sum_probs=205.9
Q ss_pred HHhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceee
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
...++|++.+.||+|+||.||+|+.+ +++.||+|++........ ..+.+.+|++++++++||||+++++++...+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchH-HHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 35678999999999999999999765 799999999976544322 2467899999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC---CcEEEeeeccc
Q 003780 575 LIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK---LEAFVADFGTA 651 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a 651 (796)
+|+||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999999887543 389999999999999999999999 99999999999999764 46999999999
Q ss_pred cccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCC
Q 003780 652 RLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSP 731 (796)
Q Consensus 652 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (796)
........ .....|++.|+|||.+.+. ++.++||||||+++|+|++|+.||.... .......+.......
T Consensus 172 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYAF 241 (287)
T ss_dssp GTBCCCSS-CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCC
T ss_pred eeecCCCc-cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCC
Confidence 87654322 2334589999999988764 8899999999999999999999987321 112222222222221
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 732 PVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 732 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
.... .......+.+++.+|++.||++|||++|++++-
T Consensus 242 ~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 242 DLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp CSGG-GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred Cchh-hhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 1111 111233578999999999999999999999863
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.7e-38 Score=346.02 Aligned_cols=256 Identities=22% Similarity=0.285 Sum_probs=195.0
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce-----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC----- 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 572 (796)
..+|++.+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3579999999999999999999877777999988654322 2369999999999999999999965443
Q ss_pred -eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-CCCcEEEeeecc
Q 003780 573 -MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKLEAFVADFGT 650 (796)
Q Consensus 573 -~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~ 650 (796)
.++||||++++.+....+.......+++..+..++.||++||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 789999998865544443222334589999999999999999999999 999999999999999 789999999999
Q ss_pred ccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh-----
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV----- 724 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 724 (796)
++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+...
T Consensus 189 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p~ 262 (394)
T 4e7w_A 189 AKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-----IDQLVEIIKVLGTPS 262 (394)
T ss_dssp CEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCC
T ss_pred cccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCC
Confidence 987654332 3345689999999998764 589999999999999999999999974321 0011111110
Q ss_pred -----------hcCCCCC----ccch-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 -----------LDSRLSP----PVDR-MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 -----------~~~~~~~----~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
....... .... ........+.+++.+||+.||++|||+.|+++|-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (394)
T 4e7w_A 263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323 (394)
T ss_dssp HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence 0000000 0000 0011234588999999999999999999999983
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-37 Score=330.46 Aligned_cols=251 Identities=23% Similarity=0.405 Sum_probs=193.7
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe------
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------ 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------ 569 (796)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH----HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH----HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 356899999999999999999975 479999999996432 224678999999999999999999998865
Q ss_pred -------cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc
Q 003780 570 -------KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE 642 (796)
Q Consensus 570 -------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 642 (796)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 457899999999999999998643 3478889999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCC--------------CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccc
Q 003780 643 AFVADFGTARLLDSDS--------------SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELL 707 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~ 707 (796)
+||+|||++....... .......|++.|+|||.+.+. .++.++||||+||++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998654321 112335689999999998764 68899999999999999998 44311
Q ss_pred ccCCCCCchhhhHHHHhhc--CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 708 SSLSSPSSDQKIMLIDVLD--SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............ ...++.. .......+.+++.+||+.||++|||++|++++-
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 232 -------MERVNILKKLRSVSIEFPPDF---DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp -------HHHHHHHHHHHSTTCCCCTTC---CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred -------hhHHHHHHhccccccccCccc---cccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 111111111111 1122222 122234478999999999999999999999863
No 229
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.2e-38 Score=336.68 Aligned_cols=252 Identities=17% Similarity=0.235 Sum_probs=198.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEe--ccee
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLH--KKCM 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~--~~~~ 573 (796)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... .+.+.+|++++++++ ||||+++++++.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 36799999999999999999964 579999999987543 357889999999997 9999999999988 5678
Q ss_pred eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC-cEEEeeecccc
Q 003780 574 FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL-EAFVADFGTAR 652 (796)
Q Consensus 574 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~ 652 (796)
++||||+++++|.+++.. +++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999999988853 78889999999999999999999 999999999999999777 89999999998
Q ss_pred ccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhH---------HH
Q 003780 653 LLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIM---------LI 722 (796)
Q Consensus 653 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~---------~~ 722 (796)
....... .....|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||..... ....... ..
T Consensus 180 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~----~~~~l~~~~~~~~~~~~~ 254 (330)
T 3nsz_A 180 FYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD----NYDQLVRIAKVLGTEDLY 254 (330)
T ss_dssp ECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS----HHHHHHHHHHHHCHHHHH
T ss_pred EcCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc----hHHHHHHHHHhcCCchhh
Confidence 7654332 334568999999999877 6789999999999999999999999852211 0000000 00
Q ss_pred Hhhc---------------CCCCCccc-----hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 723 DVLD---------------SRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 723 ~~~~---------------~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
+.+. ........ .........+.+++.+||+.||++|||++|+++|-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0000 00000000 00011234588999999999999999999999873
No 230
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-38 Score=341.78 Aligned_cols=258 Identities=22% Similarity=0.356 Sum_probs=206.0
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHH--------------HHHHHHHHHHHhhcCCCceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTF--------------FNSFQNEAHVLSKIAHRNIVKL 563 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~--------------~~~~~~E~~~l~~l~hpniv~l 563 (796)
.++|++.+.||+|+||.||+|.. +|+.||+|++.......... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 89999999997654332211 1689999999999999999999
Q ss_pred EeEEEecceeeEEEeeccCCcHHHH------HhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeE
Q 003780 564 YGFCLHKKCMFLIYKYMKRGSLFCF------LRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNIL 636 (796)
Q Consensus 564 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIl 636 (796)
++++.+++..++||||+++|+|.++ +... ....+++..+..++.|+++||+|||+ . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 5432 13458999999999999999999999 8 9999999999999
Q ss_pred ecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccC-CcCc-chhHHHHHHHHHHHHhCCCCCcccccCCCCC
Q 003780 637 LNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTE-KCDVYSFGVVALEVLMGRHPGELLSSLSSPS 714 (796)
Q Consensus 637 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DVwSlGv~l~elltg~~p~~~~~~~~~~~ 714 (796)
++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++|||||||++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876443 33345689999999999877 6666 999999999999999999998742210
Q ss_pred chhhhHHHHhhcCCCCCccc--------------hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 715 SDQKIMLIDVLDSRLSPPVD--------------RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..............+.. .........+.+++.+||+.||++|||++|++++-
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11122222221111100 00012234578999999999999999999999863
No 231
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.1e-38 Score=347.37 Aligned_cols=197 Identities=20% Similarity=0.305 Sum_probs=171.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc------CCCceeeEEeEEEec
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI------AHRNIVKLYGFCLHK 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~l~~~~~~~ 570 (796)
..+|++.+.||+|+||.||+|.. .+++.||||++..... ..+++.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR----FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc----hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 45799999999999999999965 4689999999976432 235677888888877 577999999999999
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc--EEEeee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE--AFVADF 648 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Df 648 (796)
+..++||||+. ++|.+++..... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 589998876532 3489999999999999999999999 9999999999999999987 999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 999765432 2335689999999999999999999999999999999999999874
No 232
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.8e-38 Score=335.41 Aligned_cols=259 Identities=26% Similarity=0.417 Sum_probs=186.8
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
..++|++.+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++..++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 4578999999999999999999754 6899999998755432 224578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhc-----CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 576 IYKYMKRGSLFCFLRND-----YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
||||+++++|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998742 1234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-----CccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh
Q 003780 651 ARLLDSDSS-----NRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 651 a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
+........ ......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~ 239 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--------KVLMLT 239 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------GHHHHH
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------hHHHHH
Confidence 986643211 1233568999999999875 56889999999999999999999998743211 111111
Q ss_pred hcCCCCCccc-----hhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSRLSPPVD-----RMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.......... .........+.+++.+||+.||.+||+++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111110000 0001112347899999999999999999999986
No 233
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.5e-37 Score=338.86 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=201.4
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 571 (796)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCH--HHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCc--HHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 46899999999999999999975 47899999999754432 2346789999999999999999999999765 3
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++|+||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999998 5999988753 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC---ccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc-
Q 003780 652 RLLDSDSSN---RTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD- 726 (796)
Q Consensus 652 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 726 (796)
+........ .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... .....+...+.
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~~ 250 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-----DQLNHILGILGS 250 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-----GHHHHHHHHHCS
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-----HHHHHHHHHhCC
Confidence 876533221 234579999999998654 45899999999999999999999999743221 00011110000
Q ss_pred ----------------------CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 727 ----------------------SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 727 ----------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.................+.+++.+||+.||++|||++|+++|-.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp CCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred CCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00001111111122345789999999999999999999999853
No 234
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-37 Score=342.21 Aligned_cols=257 Identities=23% Similarity=0.300 Sum_probs=194.3
Q ss_pred HHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec---
Q 003780 495 IKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK--- 570 (796)
Q Consensus 495 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--- 570 (796)
....++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 34567899999999999999999964 57999999998755322 34699999999999999999998543
Q ss_pred -----------------------------------ceeeEEEeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHH
Q 003780 571 -----------------------------------KCMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANAL 614 (796)
Q Consensus 571 -----------------------------------~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L 614 (796)
...++||||++ |+|.+.+... .....+++..+..++.|+++||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 34889999998 5887777642 1234589999999999999999
Q ss_pred HHHhhcCCCCeEEecCCCCCeEec-CCCcEEEeeeccccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHH
Q 003780 615 SYLHHDCMPSIVHRDISSNNILLN-SKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGV 692 (796)
Q Consensus 615 ~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv 692 (796)
+|||+. +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||.+.+. .++.++||||+||
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 999999 999999999999998 68899999999998765433 23345689999999998765 4899999999999
Q ss_pred HHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc-----------CC-----CC----Cccc-hhhHHHHHHHHHHHHHc
Q 003780 693 VALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD-----------SR-----LS----PPVD-RMVMQDIVLVTTVALAC 751 (796)
Q Consensus 693 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~-----~~----~~~~-~~~~~~~~~l~~li~~c 751 (796)
++|||++|+.||..... ......+..... +. .+ .... .........+.+++.+|
T Consensus 231 il~ell~g~~pf~~~~~-----~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 305 (383)
T 3eb0_A 231 VFGELILGKPLFSGETS-----IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI 305 (383)
T ss_dssp HHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence 99999999999974321 111111111100 00 00 0000 00111233478999999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 003780 752 LHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 752 l~~dP~~RPs~~evl~~ 768 (796)
|+.||++|||+.|+++|
T Consensus 306 L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 306 LRYEPDLRINPYEAMAH 322 (383)
T ss_dssp CCSSGGGSCCHHHHHTS
T ss_pred ccCChhhCCCHHHHhcC
Confidence 99999999999999976
No 235
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.1e-38 Score=352.92 Aligned_cols=308 Identities=19% Similarity=0.252 Sum_probs=268.5
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCC--CCCCCCCC
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPE--LGSLRNLE 148 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~ 148 (796)
-.+++.|+++++.+.+.+++..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|.. |.++++|+
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 3579999999999999998888999999999999999999999999999999999999999999755544 99999999
Q ss_pred EEEecCCCCCCCCchh-hhccCccceeeccccccCCCCCccccCC--CCccEEEcccccccCcchhhh--------cCCC
Q 003780 149 VLNLKGNNLNGAIPSS-LCQLTKLITMALSRNGLHGPIPSAIGDL--NNLLILSLDSNKLSGMLHQEL--------GKLK 217 (796)
Q Consensus 149 ~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~--------~~l~ 217 (796)
+|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+ .+|+.|++++|.+.+..+..+ ..++
T Consensus 133 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 133 MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999999888876 8999999999999999999999888776 566666666666665544332 2445
Q ss_pred CccccccCCccccccCCCccc-------------------------------------c--cCccceEEeccccccccCC
Q 003780 218 NLVALNVGGNKLMGPIPSTLF-------------------------------------R--LTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 218 ~L~~L~l~~N~l~~~~~~~l~-------------------------------------~--l~~L~~L~L~~N~l~~~~p 258 (796)
+|++|++++|++++..|..+. . .++|++|++++|++++.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 666666666666543333221 1 2689999999999999999
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSE 338 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 338 (796)
..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..|..+++
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CcEEEeecccccCCCCccc-cccccceEEecccccCCCCCc
Q 003780 339 LRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPP 378 (796)
Q Consensus 339 L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~ 378 (796)
|+.|+|++|++++..+..+ .+++|++|++++|++++.+|.
T Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 373 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999999999998666665 589999999999999999884
No 236
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-37 Score=334.13 Aligned_cols=260 Identities=27% Similarity=0.383 Sum_probs=200.7
Q ss_pred HhcCCccceeeecccceeEEEEEc--cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc---CCCceeeEEeEEE---
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL--PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI---AHRNIVKLYGFCL--- 568 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~l~~~~~--- 568 (796)
+.++|++.+.||+|+||.||+|+. .+|+.||+|++........ ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc-CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 457899999999999999999976 4689999999976543321 123566777777766 8999999999997
Q ss_pred --ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEe
Q 003780 569 --HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVA 646 (796)
Q Consensus 569 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 646 (796)
.....++||||++ |+|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5667899999998 599999976532 3488999999999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhc
Q 003780 647 DFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLD 726 (796)
Q Consensus 647 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (796)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.....
T Consensus 163 Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHC
T ss_pred cCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHcC
Confidence 999998654321 23345689999999999998999999999999999999999999874221 000001111000
Q ss_pred -------------------CCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 727 -------------------SRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 727 -------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
.................+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000111111223457899999999999999999999976
No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-37 Score=339.63 Aligned_cols=264 Identities=22% Similarity=0.248 Sum_probs=189.5
Q ss_pred HHHHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec
Q 003780 492 EDIIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK 570 (796)
Q Consensus 492 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 570 (796)
++.....++|++.+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++.++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 44556778999999999999999999976 46899999998655432 23567788888999999999999999764
Q ss_pred ce-------eeEEEeeccCCcHHHHHh-hcCcccccCHHHHHHHHHHHHHHHHHHh--hcCCCCeEEecCCCCCeEecC-
Q 003780 571 KC-------MFLIYKYMKRGSLFCFLR-NDYEAVVLDWTMRVNIIKCVANALSYLH--HDCMPSIVHRDISSNNILLNS- 639 (796)
Q Consensus 571 ~~-------~~lV~e~~~~gsL~~~l~-~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~dlkp~NIll~~- 639 (796)
+. .++||||++++ |.+.+. .......+++..+..++.|++.||.||| +. +|+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 43 78999999975 444333 2223345889999999999999999999 77 9999999999999997
Q ss_pred CCcEEEeeeccccccCCCCCCccccccccCccCccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhh
Q 003780 640 KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQK 718 (796)
Q Consensus 640 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~ 718 (796)
++.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... ....
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~~~~ 241 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-----AGQL 241 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH
T ss_pred CCcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-----HHHH
Confidence 89999999999987654332 33456899999999986554 89999999999999999999999974221 0000
Q ss_pred hHHHHh-----------hcCCCC---------Ccc----chhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 719 IMLIDV-----------LDSRLS---------PPV----DRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 719 ~~~~~~-----------~~~~~~---------~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..+... +.+... ... ..........+.+++.+||+.||++|||+.|+++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 242 HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 011100 000000 000 000011244688999999999999999999999984
No 238
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-37 Score=339.43 Aligned_cols=259 Identities=23% Similarity=0.307 Sum_probs=198.1
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEeccee---
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCM--- 573 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~--- 573 (796)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSH-HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccch-hHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 46899999999999999999975 479999999998654332 3356889999999999999999999999877654
Q ss_pred ---eEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 574 ---FLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 574 ---~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 588877743 288999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CC------
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SP------ 713 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~------ 713 (796)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ..
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9865432 234568999999999887 678999999999999999999999997432100 00
Q ss_pred --CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 714 --SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 714 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...........+..................+.+++.+||+.||++|||++|++++-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 00000000011111111111111112234588999999999999999999999984
No 239
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-37 Score=344.22 Aligned_cols=260 Identities=21% Similarity=0.278 Sum_probs=198.8
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC--------CCceeeEEeEEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA--------HRNIVKLYGFCL 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------hpniv~l~~~~~ 568 (796)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC----cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 46899999999999999999964 578999999997543 22457889999999985 788999999998
Q ss_pred ----ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCC---
Q 003780 569 ----HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKL--- 641 (796)
Q Consensus 569 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~--- 641 (796)
.....++||||+ ++++.+.+.... ...+++..+..++.||++||+|||+++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 556899999999 456666555432 234899999999999999999999864 899999999999999775
Q ss_pred ----------------------------------------------cEEEeeeccccccCCCCCCccccccccCccCccc
Q 003780 642 ----------------------------------------------EAFVADFGTARLLDSDSSNRTIVAGTYGYIAPEL 675 (796)
Q Consensus 642 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 675 (796)
.+||+|||.++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876532 233468999999999
Q ss_pred cccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhh-hHHHHhhcCCC-----------------------CC
Q 003780 676 AYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQK-IMLIDVLDSRL-----------------------SP 731 (796)
Q Consensus 676 ~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------------------~~ 731 (796)
+.+..++.++|||||||++|||++|+.||.............. ........... ..
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 9999999999999999999999999999974332211111111 01111111000 00
Q ss_pred --c---------cchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 732 --P---------VDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 732 --~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
. ...........+.+++.+||+.||++|||++|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0 000123344568899999999999999999999986
No 240
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=350.10 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=184.7
Q ss_pred cCCcc-ceeeecccceeEEEEEcc---CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe--cce
Q 003780 499 EDFDI-KYCIGTGGYGSVYKAQLP---NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH--KKC 572 (796)
Q Consensus 499 ~~~~~-~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~ 572 (796)
+.|++ .+.||+|+||+||+|+.+ +++.||+|++...... +.+.+|++++++++||||+++++++.. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 45666 457999999999999865 5789999999765432 367899999999999999999999954 678
Q ss_pred eeEEEeeccCCcHHHHHhhcC------cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----cCCCc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDY------EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL----NSKLE 642 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~ 642 (796)
.++||||+++ +|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 9999999975 7887775332 123489999999999999999999999 99999999999999 67789
Q ss_pred EEEeeeccccccCCCC---CCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCC----CCC
Q 003780 643 AFVADFGTARLLDSDS---SNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----SPS 714 (796)
Q Consensus 643 ~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----~~~ 714 (796)
+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 9999999998765432 222345789999999998874 58999999999999999999999996432210 000
Q ss_pred chhhhHHHHhhcCCCCCccchh---------------------h---------HHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 003780 715 SDQKIMLIDVLDSRLSPPVDRM---------------------V---------MQDIVLVTTVALACLHSKPKFRPTMQR 764 (796)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~---------------------~---------~~~~~~l~~li~~cl~~dP~~RPs~~e 764 (796)
......+...+........... . ......+.+++.+||+.||++|||++|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 0111111111111100000000 0 000234778999999999999999999
Q ss_pred HHHHHh
Q 003780 765 VCQEFL 770 (796)
Q Consensus 765 vl~~L~ 770 (796)
+++|-.
T Consensus 331 ~L~hp~ 336 (405)
T 3rgf_A 331 AMQDPY 336 (405)
T ss_dssp HHTSGG
T ss_pred HhcChh
Confidence 999854
No 241
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.4e-37 Score=335.94 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=200.7
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHH-HhhcCCCceeeEEeEEEecceee
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHV-LSKIAHRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~ 574 (796)
..++|++.+.||+|+||.||+|+. .+|+.||||++........ ..++..|..+ ++.++||||+++++++..++..+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH--HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH--HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 346899999999999999999975 5799999999976644322 3455555555 78889999999999999999999
Q ss_pred EEEeeccCCcHHHHHhhcC-cccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 575 LIYKYMKRGSLFCFLRNDY-EAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 575 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
+||||+++ +|.+++.... ....+++..+..++.||++||+|||+++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999985 9988886421 2345899999999999999999999742 899999999999999999999999999987
Q ss_pred cCCCCCCccccccccCccCccccc----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELAY----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
.... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... .........+....
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-------~~~~~~~~~~~~~~ 275 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQLKQVVEEPS 275 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHHHHHHHHSCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-------chHHHHHHHhcCCC
Confidence 6432 1222346999999999964 3468899999999999999999999987321 11122222332222
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...... .....+.+++.+||+.||++||++.|++++-
T Consensus 276 ~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 312 (340)
T 3an0_A 276 PQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHP 312 (340)
T ss_dssp CCCCGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred CCCCcc---cCCHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 211111 1233588999999999999999999999863
No 242
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.1e-37 Score=336.27 Aligned_cols=262 Identities=23% Similarity=0.322 Sum_probs=199.0
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec-----c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK-----K 571 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~ 571 (796)
.++|++.+.||+|+||.||+|... +|+.||||++...... .....+.+|++++++++||||+++++++..+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP--LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSH--HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccc--hHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 468999999999999999999754 7999999999654322 2345788999999999999999999998764 6
Q ss_pred eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccc
Q 003780 572 CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTA 651 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 651 (796)
..++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 5899988753 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC----------ccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC---------
Q 003780 652 RLLDSDSSN----------RTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS--------- 711 (796)
Q Consensus 652 ~~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~--------- 711 (796)
+........ .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876532211 122468999999998754 678999999999999999999999997432100
Q ss_pred -------CCCchhhhHHHHhhcCC---CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 712 -------SPSSDQKIMLIDVLDSR---LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 712 -------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...........+..... ...............+.+++.+||+.||++|||++|++++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00000000000111100 00011111112234578999999999999999999999974
No 243
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=372.01 Aligned_cols=311 Identities=24% Similarity=0.268 Sum_probs=189.6
Q ss_pred ccCCCCCCcEEeccCCcccccC-CcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchh--hhcc
Q 003780 92 NFSCFPGLESLSLRFNYLFGSI-PSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSS--LCQL 168 (796)
Q Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l 168 (796)
.|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+++.+|.. |.++
T Consensus 43 ~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L 122 (844)
T 3j0a_A 43 SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNL 122 (844)
T ss_dssp SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSC
T ss_pred HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCcccccc
Confidence 3666777777777777544443 667777777777777777777777777777777777777777777655554 7777
Q ss_pred CccceeeccccccCCCCC-ccccCCCCccEEEcccccccCcchhhhcCC--CC---------------------------
Q 003780 169 TKLITMALSRNGLHGPIP-SAIGDLNNLLILSLDSNKLSGMLHQELGKL--KN--------------------------- 218 (796)
Q Consensus 169 ~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~--------------------------- 218 (796)
++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++
T Consensus 123 ~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~ 202 (844)
T 3j0a_A 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFR 202 (844)
T ss_dssp SSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTT
T ss_pred CCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccc
Confidence 778888888877776654 467778888888888777766555444332 22
Q ss_pred ---ccccccCCc--------------------------------------------------------------cccccC
Q 003780 219 ---LVALNVGGN--------------------------------------------------------------KLMGPI 233 (796)
Q Consensus 219 ---L~~L~l~~N--------------------------------------------------------------~l~~~~ 233 (796)
|+.|++++| .+.+..
T Consensus 203 ~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~ 282 (844)
T 3j0a_A 203 NMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLN 282 (844)
T ss_dssp TCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEEC
T ss_pred cCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccC
Confidence 233333333 222223
Q ss_pred CCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccccc
Q 003780 234 PSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLI 313 (796)
Q Consensus 234 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 313 (796)
|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|++++|.+++..+..|.+++
T Consensus 283 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 362 (844)
T 3j0a_A 283 SRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLE 362 (844)
T ss_dssp SCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCC
T ss_pred hhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCC
Confidence 33344444455555555555544444555555555555555555544455555555555555555555544444555555
Q ss_pred ccceecccccccccCC------------------Cc----------------------ccCCCCCCcEEEeecccccCCC
Q 003780 314 SLKGLDLSNNKLSGPI------------------PP----------------------EIGKCSELRNITLRNNNLSGSI 353 (796)
Q Consensus 314 ~L~~L~Ls~N~l~~~~------------------~~----------------------~~~~l~~L~~L~L~~N~l~~~~ 353 (796)
+|++|+|++|.+++.. |. .+..+++|+.|+|++|++++..
T Consensus 363 ~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~ 442 (844)
T 3j0a_A 363 KLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS 442 (844)
T ss_dssp CCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCC
T ss_pred CCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccc
Confidence 5555555555544210 00 0123445555555555554321
Q ss_pred C------------------------------ccc-cccccceEEecccccCCCCCccc---cccccccccCCCCcccCCC
Q 003780 354 P------------------------------PEI-GLMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPD 399 (796)
Q Consensus 354 ~------------------------------~~~-~~~~L~~L~l~~N~l~~~~p~~~---~~~~~l~l~~N~l~~~~p~ 399 (796)
+ ..+ ++++|+.|+|++|++++..|..+ .++..|+|++|++++..|.
T Consensus 443 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 443 GDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp SSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred cccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChh
Confidence 1 112 35789999999999998877654 5567899999999998777
Q ss_pred CCC
Q 003780 400 YFR 402 (796)
Q Consensus 400 ~~~ 402 (796)
.+.
T Consensus 523 ~~~ 525 (844)
T 3j0a_A 523 DLP 525 (844)
T ss_dssp CCC
T ss_pred hhh
Confidence 665
No 244
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=331.76 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=191.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE--------
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL-------- 568 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-------- 568 (796)
.++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH---HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh---HHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 468999999999999999999765 589999999875532 23568899999999999999999999874
Q ss_pred ------ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-CCC
Q 003780 569 ------HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKL 641 (796)
Q Consensus 569 ------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~ 641 (796)
+....++||||++ |+|.+++.+. .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 6999998653 388999999999999999999999 999999999999997 567
Q ss_pred cEEEeeeccccccCCCC---CCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchh
Q 003780 642 EAFVADFGTARLLDSDS---SNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQ 717 (796)
Q Consensus 642 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~ 717 (796)
.+||+|||+++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------- 230 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-------- 230 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--------
Confidence 99999999998764321 12233457899999998765 6788999999999999999999999974321
Q ss_pred hhHHHHhhcCC-------------------------CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 718 KIMLIDVLDSR-------------------------LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 718 ~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
......+.... ...............+.+++.+||+.||++|||++|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (320)
T 2i6l_A 231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307 (320)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence 01111111000 00000111111234588999999999999999999999874
No 245
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-37 Score=344.63 Aligned_cols=254 Identities=26% Similarity=0.360 Sum_probs=192.3
Q ss_pred cCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEec------c
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHK------K 571 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 571 (796)
.+|++.+.||+|+||.||+|+.+ +|+.||||++..... ...+|++++++++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 46889999999999999999765 699999999875432 234699999999999999999998642 2
Q ss_pred eeeEEEeeccCCcHHHHHhhc-CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-CcEEEeeec
Q 003780 572 CMFLIYKYMKRGSLFCFLRND-YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK-LEAFVADFG 649 (796)
Q Consensus 572 ~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg 649 (796)
..++||||+++ ++.+.+... .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999986 566555431 2234589999999999999999999999 99999999999999965 568999999
Q ss_pred cccccCCCCCCccccccccCccCccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHh----
Q 003780 650 TARLLDSDSSNRTIVAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDV---- 724 (796)
Q Consensus 650 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 724 (796)
+++.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+...
T Consensus 203 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-----~~~l~~i~~~lg~p 276 (420)
T 1j1b_A 203 SAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----VDQLVEIIKVLGTP 276 (420)
T ss_dssp TCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCSC
T ss_pred hhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCC
Confidence 9987654332 2345689999999998764 789999999999999999999999974221 0111111111
Q ss_pred -------hcCCCC----Cccch------hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 725 -------LDSRLS----PPVDR------MVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 725 -------~~~~~~----~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..+... +.... ........+.+++.+||+.||++||++.|+++|-
T Consensus 277 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp CHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 011100 00000 0011124588999999999999999999999874
No 246
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-37 Score=359.09 Aligned_cols=330 Identities=21% Similarity=0.185 Sum_probs=277.2
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEe
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNL 152 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 152 (796)
.+..++++++.+.. +++..|..+++|++|+|++|.+.+..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 34566677766654 55555788999999999999999988889999999999999999999888888999999999999
Q ss_pred cCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccccc
Q 003780 153 KGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP 232 (796)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 232 (796)
++|.|++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-
Confidence 999999777777899999999999999999988889999999999999999998763 5667889999999998875
Q ss_pred CCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccc
Q 003780 233 IPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGL 312 (796)
Q Consensus 233 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 312 (796)
+...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..+
T Consensus 207 ----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 207 ----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp ----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred ----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 34456899999999999854332 2 3689999999999997 4679999999999999999999999999999
Q ss_pred cccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccccccccccccCC
Q 003780 313 ISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFLYHRFPLDLSYN 391 (796)
Q Consensus 313 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~l~~N 391 (796)
++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+ .+++|++|+|++|++++..+..+..+..|++++|
T Consensus 278 ~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 278 QRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHN 355 (597)
T ss_dssp SSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSS
T ss_pred cCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCC
Confidence 999999999999996 57778889999999999999994 55555 5899999999999999776667788889999999
Q ss_pred CCcccCCC-CCCCCC-ccccCCccccccC
Q 003780 392 DLEGEIPD-YFRDSP-FKVYGNQGICYFS 418 (796)
Q Consensus 392 ~l~~~~p~-~~~~~~-~~~~~n~~~c~~~ 418 (796)
.+++.... ++...+ ..+.++...|+.+
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 356 DWDCNSLRALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CEEHHHHHHHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCChhHHHHHHHHhhhccccccccCCcc
Confidence 99875432 333322 2235777788754
No 247
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-37 Score=331.82 Aligned_cols=253 Identities=19% Similarity=0.340 Sum_probs=200.5
Q ss_pred hcCCccceeeecccceeEEEEEc--cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCC------ceeeEEeEEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL--PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR------NIVKLYGFCLH 569 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp------niv~l~~~~~~ 569 (796)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.++|+ +++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 46899999999999999999975 368999999997543 2245788999999988755 49999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC----------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---------- 639 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---------- 639 (796)
.+..++||||+ +++|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 8899999976532 3488999999999999999999999 9999999999999987
Q ss_pred ---------CCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC
Q 003780 640 ---------KLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL 710 (796)
Q Consensus 640 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~ 710 (796)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~- 239 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS- 239 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-
Confidence 668999999999865432 2345689999999999999999999999999999999999999874221
Q ss_pred CCCCchhhhHHHHhhcCCCCC-------------------------------------ccchhhHHHHHHHHHHHHHcCC
Q 003780 711 SSPSSDQKIMLIDVLDSRLSP-------------------------------------PVDRMVMQDIVLVTTVALACLH 753 (796)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~l~~li~~cl~ 753 (796)
............. .+. ............+.+++.+||+
T Consensus 240 ----~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 314 (339)
T 1z57_A 240 ----KEHLAMMERILGP-LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314 (339)
T ss_dssp ----HHHHHHHHHHHCS-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHHhCC-CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence 0111111111100 000 0000011234568899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003780 754 SKPKFRPTMQRVCQE 768 (796)
Q Consensus 754 ~dP~~RPs~~evl~~ 768 (796)
.||++|||++|++++
T Consensus 315 ~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 315 YDPAKRITLREALKH 329 (339)
T ss_dssp SSTTTSCCHHHHTTS
T ss_pred cCcccccCHHHHhcC
Confidence 999999999999876
No 248
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=335.53 Aligned_cols=261 Identities=20% Similarity=0.365 Sum_probs=200.3
Q ss_pred HHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeE
Q 003780 496 KATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 496 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
...++|++.+.||+|+||.||+|+.++ .+|+|++........ ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED-QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC-CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH-HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 345789999999999999999998753 499999876543322 23467889999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999999997643 3488999999999999999999999 999999999999998 6799999999987653
Q ss_pred CC-----CCCccccccccCccCcccccc---------CCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHH
Q 003780 656 SD-----SSNRTIVAGTYGYIAPELAYT---------MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIML 721 (796)
Q Consensus 656 ~~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (796)
.. ........|++.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .....
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~ 252 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP--------AEAII 252 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC--------HHHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHH
Confidence 21 122233458999999999874 347889999999999999999999987321 11112
Q ss_pred HHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCccc
Q 003780 722 IDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKIAL 776 (796)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 776 (796)
..... ...+.... ......+.+++.+||+.||++|||++|+++.|+......
T Consensus 253 ~~~~~-~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 253 WQMGT-GMKPNLSQ--IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHHHT-TCCCCCCC--SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred HHhcc-CCCCCCCc--CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 12211 11111110 011123778999999999999999999999999876543
No 249
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.5e-37 Score=352.38 Aligned_cols=342 Identities=20% Similarity=0.205 Sum_probs=238.5
Q ss_pred cCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCC
Q 003780 62 KLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPEL 141 (796)
Q Consensus 62 ~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~ 141 (796)
.+++|..+-..+++.|++++|.+.+.. +..|..+++|++|+|++|.+++..|..|+++++|++|||++|.|+ .+|..
T Consensus 42 ~L~~ip~~~~~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~- 118 (562)
T 3a79_B 42 NLTHVPKDLPPRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC- 118 (562)
T ss_dssp CCCSCCTTSCTTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC-
T ss_pred CCccCCCCCCCCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc-
Confidence 444555444456778888888777544 335778888888888888888777777888888888888888887 45555
Q ss_pred CCCCCCCEEEecCCCCCCC-CchhhhccCccceeeccccccCCCCCccccCCCCc--cEEEcccccc--cCcchhhhcCC
Q 003780 142 GSLRNLEVLNLKGNNLNGA-IPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNL--LILSLDSNKL--SGMLHQELGKL 216 (796)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l 216 (796)
.+++|++|+|++|++++. +|..|+++++|++|+|++|++++. .+..+++| ++|+|++|.+ ++..|..+..+
T Consensus 119 -~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 119 -PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp -CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred -ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCccccccc
Confidence 678888888888888763 457788888888888888887753 34444444 8888888877 55555555443
Q ss_pred C-------------------------------------------------------------------------------
Q 003780 217 K------------------------------------------------------------------------------- 217 (796)
Q Consensus 217 ~------------------------------------------------------------------------------- 217 (796)
.
T Consensus 195 ~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~ 274 (562)
T 3a79_B 195 NTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW 274 (562)
T ss_dssp CEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHT
T ss_pred CcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhh
Confidence 2
Q ss_pred --CccccccCCccccccCCCcc-----cccC--------------------------ccceEEeccccccccCCccccCC
Q 003780 218 --NLVALNVGGNKLMGPIPSTL-----FRLT--------------------------NLTYLYLHSNHLNGSIPPEIGNM 264 (796)
Q Consensus 218 --~L~~L~l~~N~l~~~~~~~l-----~~l~--------------------------~L~~L~L~~N~l~~~~p~~~~~l 264 (796)
+|++|++++|.++|.+|..+ .+++ +|++|++++|.+.... ....+
T Consensus 275 ~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l 352 (562)
T 3a79_B 275 PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSP 352 (562)
T ss_dssp TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSC
T ss_pred cccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCC
Confidence 44455555555554444443 2221 2333333333332111 01677
Q ss_pred cccceeecccccccccCccccccccccccccccCccccC--ccccccccccccceecccccccccCCCc-ccCCCCCCcE
Q 003780 265 TGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG--QIPITIAGLISLKGLDLSNNKLSGPIPP-EIGKCSELRN 341 (796)
Q Consensus 265 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~ 341 (796)
++|+.|++++|++++.+|..+.++++|++|++++|++++ .+|..+.++++|++|++++|++++.+|. .+..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 889999999999998888889999999999999999987 3456788899999999999999884554 5888899999
Q ss_pred EEeecccccCCCCccccccccceEEecccccCCCCCcccc---ccccccccCCCCcccCCCC-CCCCC----ccccCCcc
Q 003780 342 ITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLY---HRFPLDLSYNDLEGEIPDY-FRDSP----FKVYGNQG 413 (796)
Q Consensus 342 L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~---~~~~l~l~~N~l~~~~p~~-~~~~~----~~~~~n~~ 413 (796)
|+|++|++++.+|..+. ++|++|+|++|+++ .+|..++ ++..|+|++|++++ +|.. |...+ ....+|+.
T Consensus 433 L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EECCSSCCCGGGGSSCC-TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCB
T ss_pred EECCCCCCCcchhhhhc-CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCc
Confidence 99999999887776554 68999999999988 6776544 45678999999985 4543 54332 12355655
Q ss_pred cc
Q 003780 414 IC 415 (796)
Q Consensus 414 ~c 415 (796)
.|
T Consensus 510 ~c 511 (562)
T 3a79_B 510 DC 511 (562)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 250
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=334.36 Aligned_cols=259 Identities=23% Similarity=0.300 Sum_probs=197.2
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce----
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC---- 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 572 (796)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 46799999999999999999975 47999999999765433 2335678999999999999999999999987654
Q ss_pred --eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 573 --MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 573 --~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
.++||||++ |+|.+++.. .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 588877643 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCccCcccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccCC----------CC------
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGRHPGELLSSLS----------SP------ 713 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~----------~~------ 713 (796)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ..
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 233568999999999876 678899999999999999999999997432100 00
Q ss_pred --CchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 714 --SSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 714 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
...........+..................+.+++.+||+.||++|||++|+++|-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000000001111111111111122234588999999999999999999999884
No 251
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-36 Score=354.93 Aligned_cols=324 Identities=20% Similarity=0.172 Sum_probs=270.0
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++.+++..+ ..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIED-KAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCH-HHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 467788888887775433 3577888888888888888877788888888888888888888766667778888888888
Q ss_pred ecCCCCCC-CCchhhhccCccceeeccccccCCCCCccc-----------------------------------------
Q 003780 152 LKGNNLNG-AIPSSLCQLTKLITMALSRNGLHGPIPSAI----------------------------------------- 189 (796)
Q Consensus 152 L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----------------------------------------- 189 (796)
|++|++++ .+|..|+++++|++|+|++|++++..|..|
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 88888775 457777777777777777777665433211
Q ss_pred --------------------------------------------------------------------------------
Q 003780 190 -------------------------------------------------------------------------------- 189 (796)
Q Consensus 190 -------------------------------------------------------------------------------- 189 (796)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred ----------------------------------------------------cCCCCccEEEcccccccCcc--hhhhcC
Q 003780 190 ----------------------------------------------------GDLNNLLILSLDSNKLSGML--HQELGK 215 (796)
Q Consensus 190 ----------------------------------------------------~~l~~L~~L~L~~N~l~~~~--~~~~~~ 215 (796)
..+++|++|+|++|++++.. +..+..
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred ccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 12345666666666766553 778899
Q ss_pred CCCccccccCCccccccCCCcccccCccceEEeccccccccCC-ccccCCcccceeecccccccccCccccccccccccc
Q 003780 216 LKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP-PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYL 294 (796)
Q Consensus 216 l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 294 (796)
+++|++|++++|.+++ +|..+..+++|+.|++++|++++..| ..+.++++|+.|++++|++++..|..+.++++|++|
T Consensus 375 ~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 9999999999999985 56889999999999999999998887 689999999999999999999999999999999999
Q ss_pred cccCccccC-ccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc-ccccceEEeccccc
Q 003780 295 SISSNMLSG-QIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG-LMKLEYLDLSHNKL 372 (796)
Q Consensus 295 ~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~l~~N~l 372 (796)
++++|.+++ .+|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+. +++|+.|+|++|++
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999998 4799999999999999999999999999999999999999999999998888875 88999999999999
Q ss_pred CCCCCcccc----ccccccccCCCCcccCC
Q 003780 373 NGTIPPFLY----HRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 373 ~~~~p~~~~----~~~~l~l~~N~l~~~~p 398 (796)
+ .+|..+. .+..+++++|.+.+..+
T Consensus 534 ~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 534 E-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp C-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred c-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 8 6776543 36689999999988665
No 252
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-36 Score=352.11 Aligned_cols=315 Identities=22% Similarity=0.268 Sum_probs=261.7
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCC-CCCCCCCCCCCCCE
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTG-SIPPELGSLRNLEV 149 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~ 149 (796)
-.+++.|++++|.+++..+ ..|..+++|++|+|++|.++. +|.. .+++|++|+|++|.+++ .+|..|+++++|++
T Consensus 75 l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~ 150 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDF-HVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTF 150 (562)
T ss_dssp CTTCCEEECCSCCCCEECT-TTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCE
T ss_pred CCCccEEECCCCCCCcCCH-HHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccE
Confidence 3579999999999987544 469999999999999999994 5555 89999999999999997 34689999999999
Q ss_pred EEecCCCCCCCCchhhhccCcc--ceeecccccc--CCCCCccccCCC--------------------------------
Q 003780 150 LNLKGNNLNGAIPSSLCQLTKL--ITMALSRNGL--HGPIPSAIGDLN-------------------------------- 193 (796)
Q Consensus 150 L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-------------------------------- 193 (796)
|+|++|++++. .+..+++| +.|+|++|.+ ++..|..|..+.
T Consensus 151 L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~ 227 (562)
T 3a79_B 151 LGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSN 227 (562)
T ss_dssp EEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEE
T ss_pred EecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEec
Confidence 99999999864 45555555 9999999999 778787776654
Q ss_pred -------------------------------------------------CccEEEcccccccCcchhhh-----cCCC--
Q 003780 194 -------------------------------------------------NLLILSLDSNKLSGMLHQEL-----GKLK-- 217 (796)
Q Consensus 194 -------------------------------------------------~L~~L~L~~N~l~~~~~~~~-----~~l~-- 217 (796)
+|++|++++|.+++.+|..+ ..++
T Consensus 228 l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L 307 (562)
T 3a79_B 228 IKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSL 307 (562)
T ss_dssp EECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEE
T ss_pred ccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchhe
Confidence 78888888898887777665 3333
Q ss_pred ------------------------CccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecc
Q 003780 218 ------------------------NLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMS 273 (796)
Q Consensus 218 ------------------------~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 273 (796)
+|+.|++++|.+.... ....+++|++|++++|++++.+|..+.++++|+.|+|+
T Consensus 308 ~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 308 MIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred ehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 4666667777665321 12678999999999999999899999999999999999
Q ss_pred ccccccc--CccccccccccccccccCccccCccc-cccccccccceecccccccccCCCcccCCCCCCcEEEeeccccc
Q 003780 274 MNNIEGT--IPLELTRLSQLLYLSISSNMLSGQIP-ITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS 350 (796)
Q Consensus 274 ~N~l~~~--~p~~l~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 350 (796)
+|++++. +|..+.++++|++|++++|.+++.+| ..+..+++|++|++++|++++.+|..+. ++|+.|+|++|+++
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 9999973 45779999999999999999998555 4588999999999999999987777665 79999999999999
Q ss_pred CCCCc-cccccccceEEecccccCCCCCcc-c---cccccccccCCCCcccCC
Q 003780 351 GSIPP-EIGLMKLEYLDLSHNKLNGTIPPF-L---YHRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 351 ~~~~~-~~~~~~L~~L~l~~N~l~~~~p~~-~---~~~~~l~l~~N~l~~~~p 398 (796)
.+|. .+.+++|++|+|++|+++ .+|.. + .++..|++++|.+.+..|
T Consensus 464 -~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 464 -SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp -CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 4554 446899999999999999 56654 3 456689999999998665
No 253
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.2e-37 Score=331.17 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=174.6
Q ss_pred HhcCCccce-eeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe----c
Q 003780 497 ATEDFDIKY-CIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH----K 570 (796)
Q Consensus 497 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~ 570 (796)
..++|.+.+ .||+|+||+||+|..+ +|+.||||++..... ...+....++.++||||+++++++.. +
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-------ARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-------HHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-------HHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 356898855 6999999999999765 799999999865321 11222334566789999999999976 4
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~D 647 (796)
...++||||+++|+|.+++.+... ..+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 568999999999999999986532 3589999999999999999999999 9999999999999986 45599999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
||+++..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.............. .. .....
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~-~~~~~ 250 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR-RI-RLGQY 250 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH-hh-hcccc
Confidence 9999865432 22345689999999999888899999999999999999999999974332111000000 00 00000
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
...... .......+.+++.+||+.||++|||++|++++-.
T Consensus 251 ~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 251 GFPNPE---WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp CCCTTT---STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred ccCchh---hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 111110 1112334789999999999999999999999753
No 254
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.1e-37 Score=342.04 Aligned_cols=253 Identities=22% Similarity=0.289 Sum_probs=187.0
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~ 577 (796)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++..++..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 3455578899999999987766789999999986542 24578899999886 8999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCccc----ccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCC-------------
Q 003780 578 KYMKRGSLFCFLRNDYEAV----VLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSK------------- 640 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~------------- 640 (796)
||+. |+|.+++....... ...+..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 69999998653211 112334578999999999999999 99999999999999754
Q ss_pred CcEEEeeeccccccCCCCCC----ccccccccCccCcccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCcccc
Q 003780 641 LEAFVADFGTARLLDSDSSN----RTIVAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLM-GRHPGELLS 708 (796)
Q Consensus 641 ~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~ 708 (796)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999877543221 223569999999999875 568899999999999999999 999986321
Q ss_pred cCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 709 SLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
............. ..............+.+++.+||+.||++|||+.|+++|-
T Consensus 245 ------~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 245 ------SRESNIIRGIFSL--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp ------THHHHHHHTCCCC--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred ------hhHHHHhcCCCCc--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 1111111111111 1000001123345688999999999999999999999763
No 255
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=350.63 Aligned_cols=326 Identities=21% Similarity=0.236 Sum_probs=253.8
Q ss_pred cCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCC
Q 003780 62 KLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPEL 141 (796)
Q Consensus 62 ~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~ 141 (796)
..++|.-.-..+++.|+++++.+++..+ ..|..+++|++|+|++|++.+..|..|+++++|++|||++|+|+ .+|..
T Consensus 11 ~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~- 87 (520)
T 2z7x_B 11 GLIHVPKDLSQKTTILNISQNYISELWT-SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH- 87 (520)
T ss_dssp CCSSCCCSCCTTCSEEECCSSCCCCCCH-HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC-
T ss_pred CcccccccccccccEEECCCCcccccCh-hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc-
Confidence 3444443333679999999999987554 35899999999999999999998999999999999999999999 56665
Q ss_pred CCCCCCCEEEecCCCCCC-CCchhhhccCccceeeccccccCCCCCccccCCCCc--cEEEcccccc--cCcchhhhcCC
Q 003780 142 GSLRNLEVLNLKGNNLNG-AIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNL--LILSLDSNKL--SGMLHQELGKL 216 (796)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l 216 (796)
.+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++ ..|..+++| ++|+|++|.+ .+..|..+..+
T Consensus 88 -~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l 163 (520)
T 2z7x_B 88 -PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDF 163 (520)
T ss_dssp -CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTC
T ss_pred -ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccccccccccccc
Confidence 89999999999999997 478999999999999999999986 467778888 9999999999 66666666553
Q ss_pred C-------------------------------------------------------------------------------
Q 003780 217 K------------------------------------------------------------------------------- 217 (796)
Q Consensus 217 ~------------------------------------------------------------------------------- 217 (796)
.
T Consensus 164 ~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~ 243 (520)
T 2z7x_B 164 NTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQL 243 (520)
T ss_dssp CEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHH
T ss_pred ccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHH
Confidence 2
Q ss_pred ----CccccccCCccccccCCCcc-----cccCccceEEeccccccccCCc-c-------------------------cc
Q 003780 218 ----NLVALNVGGNKLMGPIPSTL-----FRLTNLTYLYLHSNHLNGSIPP-E-------------------------IG 262 (796)
Q Consensus 218 ----~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~p~-~-------------------------~~ 262 (796)
+|++|++++|+++|.+|..+ .++++|+.+++++|.+ .+|. . +.
T Consensus 244 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 321 (520)
T 2z7x_B 244 VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPS 321 (520)
T ss_dssp HHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCS
T ss_pred hhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchh
Confidence 56666666666666666666 5555555555555554 2220 0 15
Q ss_pred CCcccceeecccccccccCccccccccccccccccCccccC--ccccccccccccceecccccccccCCCc-ccCCCCCC
Q 003780 263 NMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG--QIPITIAGLISLKGLDLSNNKLSGPIPP-EIGKCSEL 339 (796)
Q Consensus 263 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L 339 (796)
.+++|+.|++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 67788888888888888888888888888888888888886 5567788888888888888888875554 47788888
Q ss_pred cEEEeecccccCCCCccccccccceEEecccccCCCCCccc---cccccccccCCCCcccCCC
Q 003780 340 RNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPD 399 (796)
Q Consensus 340 ~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~---~~~~~l~l~~N~l~~~~p~ 399 (796)
+.|+|++|++++.+|..+. ++|+.|++++|+++ .+|..+ .++..|++++|++++ +|.
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~ 461 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP-PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPD 461 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC-TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCT
T ss_pred CEEECcCCCCCcchhhhhc-ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCH
Confidence 8888888888877666554 68888888888888 777654 345578888888884 444
No 256
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-36 Score=334.08 Aligned_cols=200 Identities=25% Similarity=0.347 Sum_probs=170.5
Q ss_pred HhcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CC-----ceeeEEeEEEe
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HR-----NIVKLYGFCLH 569 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----niv~l~~~~~~ 569 (796)
..++|++.+.||+|+||+||+|..+ +++.||||++.... ...+++..|+.+++.++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 4578999999999999999999754 68999999997543 22456788888888885 54 49999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec--CCCcEEEee
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN--SKLEAFVAD 647 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~D 647 (796)
.+..++||||+++ +|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~~-~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-NLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCCC-BHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCCC-CHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999999964 99999986532 3489999999999999999999952 22899999999999995 477899999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999876532 2345689999999999999999999999999999999999999974
No 257
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.8e-37 Score=356.37 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=203.2
Q ss_pred HhcCCccceeeecccceeEEEEEcc----CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQLP----NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC 572 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 572 (796)
..++|++.+.||+|+||.||+|... .+..||+|++...... ...+.+.+|+.++++++||||+++++++. ++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 4568999999999999999999754 2567999998765432 23468999999999999999999999985 466
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999998643 3488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC-ccccccccCccCccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 653 LLDSDSSN-RTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 653 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .......+.....
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--------~~~~~~~i~~~~~- 610 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------NNDVIGRIENGER- 610 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHHTCC-
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHcCCC-
Confidence 76543222 223446789999999998899999999999999999997 999987321 1112222222111
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhc
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTC 772 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 772 (796)
..... .....+.+++.+||+.||++|||+.|+++.|+..
T Consensus 611 ~~~~~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 611 LPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111 1223478999999999999999999999999875
No 258
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=340.65 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=187.5
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV 576 (796)
..+|+..+.||+|+||+||.....+|+.||||++...... .+.+|+++++++ +||||+++++++.+....++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3568899999999999976655667999999999754432 356799999999 799999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC-----CCcEEEeeeccc
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS-----KLEAFVADFGTA 651 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-----~~~~kl~Dfg~a 651 (796)
|||+. |+|.+++..... ...+..+..++.||++||+|||+. +|+||||||+||+++. ...+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99997 599999976532 234445678999999999999999 9999999999999953 346889999999
Q ss_pred cccCCCC---CCccccccccCccCccccc---cCCcCcchhHHHHHHHHHHHHh-CCCCCcccccCCCCCchhhhHHHHh
Q 003780 652 RLLDSDS---SNRTIVAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLM-GRHPGELLSSLSSPSSDQKIMLIDV 724 (796)
Q Consensus 652 ~~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwSlGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (796)
+...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||.... .. .....
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~------~~---~~~~~ 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL------QR---QANIL 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT------TH---HHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh------HH---HHHHH
Confidence 8765432 1233456999999999987 4567789999999999999999 999986311 11 11111
Q ss_pred hcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 725 LDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
...... ............+.+++.+||+.||++|||++|+++|
T Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 242 LGACSL-DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTCCCC-TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCCc-cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 111111 1111112233447789999999999999999999976
No 259
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-36 Score=335.60 Aligned_cols=329 Identities=21% Similarity=0.175 Sum_probs=265.8
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEe
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNL 152 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 152 (796)
++..++++++.++. ++...|..+++|++|+|++|.+.+..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45667777766654 45545788889999999999988888888899999999999999998887888888999999999
Q ss_pred cCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccccc
Q 003780 153 KGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP 232 (796)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 232 (796)
++|+++...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++. .+..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc
Confidence 99998866556678889999999999999888888888899999999999988876 356678888899999888742
Q ss_pred CCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccc
Q 003780 233 IPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGL 312 (796)
Q Consensus 233 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 312 (796)
...++|++|++++|.++.. |.. ..++|+.|++++|++++. ..+..+++|++|++++|.+++..|..+..+
T Consensus 202 -----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (390)
T 3o6n_A 202 -----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 271 (390)
T ss_dssp -----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred -----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcccc
Confidence 3446899999999999854 432 347899999999999974 578999999999999999999999999999
Q ss_pred cccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccccccccccccCC
Q 003780 313 ISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFLYHRFPLDLSYN 391 (796)
Q Consensus 313 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~l~~N 391 (796)
++|++|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+ .+++|++|++++|+++..-...+.++..|++++|
T Consensus 272 ~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N 349 (390)
T 3o6n_A 272 QRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHN 349 (390)
T ss_dssp SSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSS
T ss_pred ccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCC
Confidence 999999999999985 56677889999999999999995 44444 5899999999999998765566778889999999
Q ss_pred CCcccCCC-CCCCCC-ccccCCcccccc
Q 003780 392 DLEGEIPD-YFRDSP-FKVYGNQGICYF 417 (796)
Q Consensus 392 ~l~~~~p~-~~~~~~-~~~~~n~~~c~~ 417 (796)
.+++.-.. ++...+ ..+.+++..|..
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 350 DWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CccchhHHHHHHHHHhhcccccCceecc
Confidence 99874332 222211 122455555653
No 260
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=347.39 Aligned_cols=325 Identities=23% Similarity=0.284 Sum_probs=273.6
Q ss_pred ccCCceee---CCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCC-C
Q 003780 61 CKLDGVTC---NTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTG-S 136 (796)
Q Consensus 61 C~w~gv~C---~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~ 136 (796)
|...++.. ..-.+++.|++++|.+++..+. .|..+++|++|+|++|.+++ +|.. .+++|++|+|++|.+++ .
T Consensus 31 n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 31 NYISELWTSDILSLSKLRILIISHNRIQYLDIS-VFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALP 106 (520)
T ss_dssp SCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGG-GGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCC
T ss_pred CcccccChhhccccccccEEecCCCccCCcChH-HhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCcccccc
Confidence 55555542 2346799999999999876544 59999999999999999995 4554 89999999999999997 4
Q ss_pred CCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcc--ceeecccccc--CCCCCccccCCC-------------------
Q 003780 137 IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKL--ITMALSRNGL--HGPIPSAIGDLN------------------- 193 (796)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~------------------- 193 (796)
+|..|+++++|++|+|++|++++ ..+..+++| +.|+|++|.+ .+..|..+..+.
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~ 183 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILD 183 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCC
T ss_pred chhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhh
Confidence 78999999999999999999986 567788888 9999999999 777777776643
Q ss_pred ----------------------------------------------------------------CccEEEcccccccCcc
Q 003780 194 ----------------------------------------------------------------NLLILSLDSNKLSGML 209 (796)
Q Consensus 194 ----------------------------------------------------------------~L~~L~L~~N~l~~~~ 209 (796)
+|++|++++|++++.+
T Consensus 184 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 263 (520)
T 2z7x_B 184 VSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQL 263 (520)
T ss_dssp CCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCC
T ss_pred hhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCcc
Confidence 7888888999998888
Q ss_pred hhhh-----cCCCCccccccCCccccccCC-Cc-------------------------ccccCccceEEeccccccccCC
Q 003780 210 HQEL-----GKLKNLVALNVGGNKLMGPIP-ST-------------------------LFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 210 ~~~~-----~~l~~L~~L~l~~N~l~~~~~-~~-------------------------l~~l~~L~~L~L~~N~l~~~~p 258 (796)
|..+ +++++|+.+++++|.+ .+| .. +..+++|++|++++|++++.+|
T Consensus 264 p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 341 (520)
T 2z7x_B 264 DFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVF 341 (520)
T ss_dssp CCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTT
T ss_pred ccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhh
Confidence 8877 7777777777777766 223 11 2678999999999999999899
Q ss_pred ccccCCcccceeecccccccc--cCccccccccccccccccCccccCcccc-ccccccccceecccccccccCCCcccCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEG--TIPLELTRLSQLLYLSISSNMLSGQIPI-TIAGLISLKGLDLSNNKLSGPIPPEIGK 335 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 335 (796)
..++++++|+.|+|++|++++ .+|..+..+++|++|++++|.+++.+|. .+..+++|++|++++|++++..|..+.
T Consensus 342 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 342 ENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp TTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred hhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-
Confidence 999999999999999999997 5678899999999999999999985665 588999999999999999988877765
Q ss_pred CCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCcc-c---cccccccccCCCCcccCC
Q 003780 336 CSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPF-L---YHRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 336 l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~-~---~~~~~l~l~~N~l~~~~p 398 (796)
++|+.|+|++|+++ .+|..+ .+++|++|++++|+++ .+|.. + .++..|++++|.+++..+
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 79999999999999 666644 6899999999999999 57764 3 456689999999987554
No 261
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.8e-36 Score=355.86 Aligned_cols=331 Identities=23% Similarity=0.302 Sum_probs=270.5
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++++++.. +..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLP-AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCC-GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcC-HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 57999999999998744 44689999999999999999999999999999999999999999976666899999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhc--CCCCccccccCCccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELG--KLKNLVALNVGGNKL 229 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l 229 (796)
|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+. .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988889999999999999999999999999999999999999999999999888765 458999999999999
Q ss_pred cccCCCccccc---------------------------CccceEEeccccccccCCccccCCcc--cceeeccccccccc
Q 003780 230 MGPIPSTLFRL---------------------------TNLTYLYLHSNHLNGSIPPEIGNMTG--ILKVDMSMNNIEGT 280 (796)
Q Consensus 230 ~~~~~~~l~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~ 280 (796)
++..|..+..+ ++|+.|++++|.+++..|..+.+++. |+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 98888776654 45677888888888888888887765 89999999998888
Q ss_pred CccccccccccccccccCccccCccccccccccccceeccccccccc-----CCCc----ccCCCCCCcEEEeecccccC
Q 003780 281 IPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSG-----PIPP----EIGKCSELRNITLRNNNLSG 351 (796)
Q Consensus 281 ~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~~~----~~~~l~~L~~L~L~~N~l~~ 351 (796)
.|..|..+++|++|++++|.+++..|..+.++++|++|++++|...+ .+|. .|..+++|+.|++++|++++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 88888888999999999998888888888888888888887765543 2232 56777778888888888877
Q ss_pred CCCccc-cccccceEEecccccCCC-CCcc-c-----cccccccccCCCCcccCCCCCCC
Q 003780 352 SIPPEI-GLMKLEYLDLSHNKLNGT-IPPF-L-----YHRFPLDLSYNDLEGEIPDYFRD 403 (796)
Q Consensus 352 ~~~~~~-~~~~L~~L~l~~N~l~~~-~p~~-~-----~~~~~l~l~~N~l~~~~p~~~~~ 403 (796)
..+..+ ++++|++|++++|.+.+. +|.. + ..+..|++++|.+++..|..|..
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 666655 366777777777765433 2211 1 23456667777776666655543
No 262
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5e-37 Score=329.67 Aligned_cols=259 Identities=24% Similarity=0.288 Sum_probs=179.5
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHH-HHhhcCCCceeeEEeEEEecceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAH-VLSKIAHRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~l 575 (796)
.++|++.+.||+|+||.||+|..+ +|+.||||++....... ...++..|+. +++.++||||+++++++..++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK--EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH--HHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCch--HHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 468999999999999999999764 79999999997654332 2345555665 7778899999999999999999999
Q ss_pred EEeeccCCcHHHHHhhc--CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 576 IYKYMKRGSLFCFLRND--YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
||||+++ +|.+++... .....+++..+..++.|+++||.|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 887777532 12345899999999999999999999852 899999999999999999999999999987
Q ss_pred cCCCCCCccccccccCccCcccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC
Q 003780 654 LDSDSSNRTIVAGTYGYIAPELA----YTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL 729 (796)
Q Consensus 654 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (796)
..... ......||+.|+|||++ .+..++.++|||||||++|+|++|+.||...... ............
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHHHHhcCCC
Confidence 65432 22334699999999998 4566889999999999999999999998742211 001111111111
Q ss_pred CCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 730 SPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 730 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
..............+.+++.+||+.||++|||++|++++-
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 1000000111233578999999999999999999998864
No 263
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.6e-37 Score=333.78 Aligned_cols=261 Identities=20% Similarity=0.301 Sum_probs=198.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-----------CCceeeEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-----------HRNIVKLYG 565 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~l~~ 565 (796)
.++|++.+.||+|+||+||+|+. .+++.||||++..... ..+.+.+|++++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc----chhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 35899999999999999999975 5799999999975432 2356788999998886 899999999
Q ss_pred EEEecc----eeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec---
Q 003780 566 FCLHKK----CMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN--- 638 (796)
Q Consensus 566 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--- 638 (796)
++...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 998654 789999999 8899999986432 34889999999999999999999953 899999999999994
Q ss_pred ---CCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCc
Q 003780 639 ---SKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSS 715 (796)
Q Consensus 639 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~ 715 (796)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4447999999999876532 2234689999999999999999999999999999999999999984332111111
Q ss_pred hhh-hHHHHhhcCC-----------------------CCC-c----------cchhhHHHHHHHHHHHHHcCCCCCCCCC
Q 003780 716 DQK-IMLIDVLDSR-----------------------LSP-P----------VDRMVMQDIVLVTTVALACLHSKPKFRP 760 (796)
Q Consensus 716 ~~~-~~~~~~~~~~-----------------------~~~-~----------~~~~~~~~~~~l~~li~~cl~~dP~~RP 760 (796)
... ..+...+... ... . ...........+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 111 0111111000 000 0 0001223455688999999999999999
Q ss_pred CHHHHHHHH
Q 003780 761 TMQRVCQEF 769 (796)
Q Consensus 761 s~~evl~~L 769 (796)
|++|+++|-
T Consensus 327 t~~ell~hp 335 (373)
T 1q8y_A 327 DAGGLVNHP 335 (373)
T ss_dssp CHHHHHTCG
T ss_pred CHHHHhhCh
Confidence 999999974
No 264
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=350.51 Aligned_cols=330 Identities=22% Similarity=0.225 Sum_probs=213.4
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++++++..+ ..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECT-TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccCh-hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468888888888876443 4588888888888888888888888888888888888888888877778888888888888
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCC-CCCccccCCCCccEEEcccccccCcchhhhcCCCCc----cccccCC
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHG-PIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNL----VALNVGG 226 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~l~~ 226 (796)
|++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 88888887666678888888888888888886 368888888888888888888877666666555555 4555555
Q ss_pred ccccccCC------------------------------------------------------------------------
Q 003780 227 NKLMGPIP------------------------------------------------------------------------ 234 (796)
Q Consensus 227 N~l~~~~~------------------------------------------------------------------------ 234 (796)
|.+++..|
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 54433222
Q ss_pred ---------CcccccCccceEEeccccccccCCccc------------------------------------------cC
Q 003780 235 ---------STLFRLTNLTYLYLHSNHLNGSIPPEI------------------------------------------GN 263 (796)
Q Consensus 235 ---------~~l~~l~~L~~L~L~~N~l~~~~p~~~------------------------------------------~~ 263 (796)
..+..+++|++|++++|.++ .+|..+ ..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 12222333444444443333 122111 23
Q ss_pred CcccceeecccccccccC--ccc-----------------------cccccccccccccCccccCccc-cccccccccce
Q 003780 264 MTGILKVDMSMNNIEGTI--PLE-----------------------LTRLSQLLYLSISSNMLSGQIP-ITIAGLISLKG 317 (796)
Q Consensus 264 l~~L~~L~Ls~N~l~~~~--p~~-----------------------l~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~ 317 (796)
+++|+.|++++|++++.. |.. +..+++|++|++++|.+.+..+ ..+..+++|++
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 344555555555554332 333 5555555555555555555443 34556666666
Q ss_pred ecccccccccCCCcccCCCCCCcEEEeeccccc-CCCCccc-cccccceEEecccccCCCCCcccc---ccccccccCCC
Q 003780 318 LDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS-GSIPPEI-GLMKLEYLDLSHNKLNGTIPPFLY---HRFPLDLSYND 392 (796)
Q Consensus 318 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~---~~~~l~l~~N~ 392 (796)
|++++|.+++..|..+..+++|+.|+|++|+++ +.+|..+ .+++|++|++++|++++..|..+. ++..|++++|.
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 666666666666666666666666666666665 3455444 356666666666666655554433 34466666776
Q ss_pred CcccCCCCCCC
Q 003780 393 LEGEIPDYFRD 403 (796)
Q Consensus 393 l~~~~p~~~~~ 403 (796)
+++.+|..|..
T Consensus 506 l~~~~~~~~~~ 516 (570)
T 2z63_A 506 LKSVPDGIFDR 516 (570)
T ss_dssp CSCCCTTTTTT
T ss_pred CCCCCHHHhhc
Confidence 66666555543
No 265
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=325.35 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=182.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|..+ +|+.||||++........ ..+.+.++..+++.++||||+++++++..++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHH-HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchH-HHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 467999999999999999999764 799999999987654332 234455556678888999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeeccccccC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLD 655 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 655 (796)
|||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 556655554322 348899999999999999999998 5 89999999999999999999999999997664
Q ss_pred CCCCCccccccccCccCccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 656 SDSSNRTIVAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 656 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
... ......|++.|+|||++. ...++.++|||||||++|+|++|+.||.... ...............
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~ 248 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-------TDFEVLTKVLQEEPP 248 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHHHHHHSCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-------ccHHHHHHHhccCCC
Confidence 432 223456899999999984 5568889999999999999999999987321 111222222222211
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEF 769 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 769 (796)
. ... .......+.+++.+||+.||.+||+++|++++-
T Consensus 249 ~-~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 249 L-LPG-HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp C-CCS-SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred C-CCc-cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 1 100 011223478999999999999999999999874
No 266
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.1e-36 Score=349.96 Aligned_cols=322 Identities=19% Similarity=0.190 Sum_probs=195.8
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++.+.+.. +..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 57 ~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIH-EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLY 135 (606)
T ss_dssp TTCSEEECTTCCCCEEC-TTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEE
T ss_pred ccceEEECCCCccceeC-hhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEE
Confidence 34556666666655432 23456666666666666666655555566666666666666655554445555555555555
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCcc-----------------------------------
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLL----------------------------------- 196 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----------------------------------- 196 (796)
|++|++++..+..+..+++|++|+|++|.+++..|..|+.+++|+
T Consensus 136 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~ 215 (606)
T 3t6q_A 136 LGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNL 215 (606)
T ss_dssp CCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCH
T ss_pred CCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhH
Confidence 555555543322333345555555555544444444444444333
Q ss_pred ------------------------------------------EEEcccccccCcchhhhcCCCCccccccCCccccccCC
Q 003780 197 ------------------------------------------ILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIP 234 (796)
Q Consensus 197 ------------------------------------------~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 234 (796)
.|++++|.++++.+..|..+++|++|++++|+++ .+|
T Consensus 216 ~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp 294 (606)
T 3t6q_A 216 LVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELP 294 (606)
T ss_dssp HHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCC
T ss_pred HHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCC
Confidence 3444444444444455667777888888888777 566
Q ss_pred CcccccCccceEEeccccccccCCccccCCcccceeecccccccccCcc-ccccccccccccccCccccCcc--cccccc
Q 003780 235 STLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPL-ELTRLSQLLYLSISSNMLSGQI--PITIAG 311 (796)
Q Consensus 235 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~--~~~~~~ 311 (796)
..+.++++|++|++++|++++..|..+.++++|+.|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..
T Consensus 295 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 374 (606)
T 3t6q_A 295 SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374 (606)
T ss_dssp SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTT
T ss_pred hhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhccc
Confidence 6777777788888887777766666777777777777777777655544 3666777777777777776554 556666
Q ss_pred ccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcc-c-cccccceEEecccccCCCCCccc---cccccc
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPE-I-GLMKLEYLDLSHNKLNGTIPPFL---YHRFPL 386 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~-~~~~L~~L~l~~N~l~~~~p~~~---~~~~~l 386 (796)
+++|++|++++|++++..|..|..+++|+.|++++|++++..|.. + .+++|+.|++++|++++..|..+ .++..|
T Consensus 375 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp CTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 777777777777776666666666777777777777766655443 2 35666666666666666555443 334456
Q ss_pred cccCCCCcc
Q 003780 387 DLSYNDLEG 395 (796)
Q Consensus 387 ~l~~N~l~~ 395 (796)
++++|.+++
T Consensus 455 ~L~~n~l~~ 463 (606)
T 3t6q_A 455 NLQGNHFPK 463 (606)
T ss_dssp ECTTCBCGG
T ss_pred ECCCCCCCc
Confidence 666666655
No 267
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=324.79 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=193.2
Q ss_pred HHHHhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhc----CCCceeeEEe
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKI----AHRNIVKLYG 565 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~hpniv~l~~ 565 (796)
.....++|++.+.||+|+||.||+|+. .+++.||||++........ .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999975 4789999999976543221 1123456789999988 8999999999
Q ss_pred EEEecceeeEEEee-ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-CCCcE
Q 003780 566 FCLHKKCMFLIYKY-MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKLEA 643 (796)
Q Consensus 566 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~ 643 (796)
++...+..++|+|+ +.+++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 78999999998643 389999999999999999999999 999999999999999 88999
Q ss_pred EEeeeccccccCCCCCCccccccccCccCccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHH
Q 003780 644 FVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLI 722 (796)
Q Consensus 644 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (796)
||+|||+++..... ......|++.|+|||++.+..+. .++||||+|+++|+|++|+.||....
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------- 243 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------- 243 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------------
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------------
Confidence 99999999876543 23345689999999998876664 58999999999999999999987321
Q ss_pred HhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 723 DVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
.......... . .....+.+++.+||+.||++|||++|++++-.
T Consensus 244 ~~~~~~~~~~--~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 244 EILEAELHFP--A---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp HHHHTCCCCC--T---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred HHhhhccCCc--c---cCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 1111111111 0 11234778999999999999999999998743
No 268
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.6e-37 Score=329.56 Aligned_cols=247 Identities=22% Similarity=0.332 Sum_probs=200.7
Q ss_pred HhcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhh---HHHHHHHHHHHHHhhcC--CCceeeEEeEEEec
Q 003780 497 ATEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEET---TFFNSFQNEAHVLSKIA--HRNIVKLYGFCLHK 570 (796)
Q Consensus 497 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~ 570 (796)
..++|++.+.||+|+||.||+|.. .+++.||||++........ ...+.+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 457899999999999999999964 5789999999976543321 11235678999999996 59999999999999
Q ss_pred ceeeEEEeeccC-CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEec-CCCcEEEeee
Q 003780 571 KCMFLIYKYMKR-GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLN-SKLEAFVADF 648 (796)
Q Consensus 571 ~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Df 648 (796)
+..++|+|++.+ ++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999986 89999998643 489999999999999999999999 999999999999999 7889999999
Q ss_pred ccccccCCCCCCccccccccCccCccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 649 GTARLLDSDSSNRTIVAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 649 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
|+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .....
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------------~~~~~ 258 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------------EIIRG 258 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------------HHHHC
T ss_pred ccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------------hhhcc
Confidence 999876532 2233569999999999887665 678999999999999999999987321 11111
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
..... . .....+.+++.+||+.||++|||++|++++-.
T Consensus 259 ~~~~~-~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 259 QVFFR-Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp CCCCS-S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ccccc-c----cCCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 11110 1 11234778999999999999999999998643
No 269
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-36 Score=327.81 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=196.9
Q ss_pred hcCCccceeeecccceeEEEEEcc-CC-cEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCc------eeeEEeEEEe
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NG-KVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN------IVKLYGFCLH 569 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~ 569 (796)
.++|++.+.||+|+||.||+|... ++ +.||+|++..... ..+.+.+|+.++++++|++ ++.+.+++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK----YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc----chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 468999999999999999999754 44 7899999975432 2457888999999987655 9999999999
Q ss_pred cceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe------------
Q 003780 570 KKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILL------------ 637 (796)
Q Consensus 570 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll------------ 637 (796)
.+..++||||+ ++++.+++.... ...+++..+..++.||++||+|||+. +|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 556767666542 23489999999999999999999999 99999999999999
Q ss_pred -------cCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccC
Q 003780 638 -------NSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSL 710 (796)
Q Consensus 638 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~ 710 (796)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~- 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN- 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-
Confidence 56789999999999865432 2345699999999999999999999999999999999999999974221
Q ss_pred CCCCchhhhHHHHhhcCC----------------------------------CCC--ccchhhHHHHHHHHHHHHHcCCC
Q 003780 711 SSPSSDQKIMLIDVLDSR----------------------------------LSP--PVDRMVMQDIVLVTTVALACLHS 754 (796)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~----------------------------------~~~--~~~~~~~~~~~~l~~li~~cl~~ 754 (796)
.............. ..+ ............+.+++.+||+.
T Consensus 245 ----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 245 ----REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp ----HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred ----HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 00001111111000 000 00000112234688999999999
Q ss_pred CCCCCCCHHHHHHH
Q 003780 755 KPKFRPTMQRVCQE 768 (796)
Q Consensus 755 dP~~RPs~~evl~~ 768 (796)
||++|||++|+++|
T Consensus 321 dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 321 DPAQRITLAEALLH 334 (355)
T ss_dssp STTTSCCHHHHTTS
T ss_pred ChhhCcCHHHHhcC
Confidence 99999999999876
No 270
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-36 Score=360.13 Aligned_cols=322 Identities=19% Similarity=0.252 Sum_probs=275.5
Q ss_pred CCeEEEeCCCCCccc-----------------ccccc-ccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCc-
Q 003780 72 RSIIEINLPEKKLKG-----------------ELSQF-NFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN- 132 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~-----------------~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~- 132 (796)
.++..|+|++|.++| .++.. .|.++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 578899999999999 25543 24499999999999999999999999999999999999998
Q ss_pred CCC-CCCCCCCCC-------CCCCEEEecCCCCCCCCch--hhhccCccceeeccccccCCCCCccccCCCCccEEEccc
Q 003780 133 LTG-SIPPELGSL-------RNLEVLNLKGNNLNGAIPS--SLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDS 202 (796)
Q Consensus 133 l~~-~~p~~~~~l-------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 202 (796)
+++ .+|..++++ ++|++|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDY 604 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcC
Confidence 998 788766555 49999999999999 8888 9999999999999999999 777 899999999999999
Q ss_pred ccccCcchhhhcCCCC-ccccccCCccccccCCCcccccCc--cceEEeccccccccCCcc---cc--CCcccceeeccc
Q 003780 203 NKLSGMLHQELGKLKN-LVALNVGGNKLMGPIPSTLFRLTN--LTYLYLHSNHLNGSIPPE---IG--NMTGILKVDMSM 274 (796)
Q Consensus 203 N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~p~~---~~--~l~~L~~L~Ls~ 274 (796)
|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++++.+|.. +. .+++|+.|+|++
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~ 682 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSY 682 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCS
T ss_pred Cccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccC
Confidence 9999 77888999999 999999999999 77888877654 999999999999877642 22 345899999999
Q ss_pred ccccccCccccccccccccccccCccccCcccccccc--------ccccceecccccccccCCCcccC--CCCCCcEEEe
Q 003780 275 NNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG--------LISLKGLDLSNNKLSGPIPPEIG--KCSELRNITL 344 (796)
Q Consensus 275 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L 344 (796)
|+++...+..+..+++|+.|+|++|.++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|
T Consensus 683 N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~L 760 (876)
T 4ecn_A 683 NEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDV 760 (876)
T ss_dssp SCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEEC
T ss_pred CcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEe
Confidence 9999544444558999999999999999 55554332 349999999999999 7888887 9999999999
Q ss_pred ecccccCCCCccc-cccccceEEecc------cccCCCCCcccc---ccccccccCCCCcccCCCCCC
Q 003780 345 RNNNLSGSIPPEI-GLMKLEYLDLSH------NKLNGTIPPFLY---HRFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 345 ~~N~l~~~~~~~~-~~~~L~~L~l~~------N~l~~~~p~~~~---~~~~l~l~~N~l~~~~p~~~~ 402 (796)
++|++++ +|..+ .+++|+.|+|++ |++.+.+|..+. ++..|+|++|.+ +.+|..+.
T Consensus 761 s~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~ 826 (876)
T 4ecn_A 761 SYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT 826 (876)
T ss_dssp CSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred CCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc
Confidence 9999998 66555 589999999976 888899997664 456899999999 88888654
No 271
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=349.90 Aligned_cols=326 Identities=21% Similarity=0.226 Sum_probs=253.8
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++++++. ++..|..+++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 52 ~~L~~L~Ls~n~i~~i-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 52 PELQVLDLSRCEIQTI-EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (570)
T ss_dssp SSCCEEECTTCCCCEE-CTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE
T ss_pred CCceEEECCCCcCCcc-CcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEe
Confidence 4688888888888763 444588888888888888888888888888888888888888888866665788888888888
Q ss_pred ecCCCCCC-CCchhhhccCccceeeccccccCCCCCccccCCCCc----cEEEcccccccCcch----------------
Q 003780 152 LKGNNLNG-AIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNL----LILSLDSNKLSGMLH---------------- 210 (796)
Q Consensus 152 L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N~l~~~~~---------------- 210 (796)
|++|++++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|.++++.+
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccc
Confidence 88888886 468888888888888888888776655555544444 444444444332221
Q ss_pred -----------------------------------------------------------------hhh------------
Q 003780 211 -----------------------------------------------------------------QEL------------ 213 (796)
Q Consensus 211 -----------------------------------------------------------------~~~------------ 213 (796)
..+
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 111
Q ss_pred -----------------------------------------------------cCCCCccccccCCccccccC--CCccc
Q 003780 214 -----------------------------------------------------GKLKNLVALNVGGNKLMGPI--PSTLF 238 (796)
Q Consensus 214 -----------------------------------------------------~~l~~L~~L~l~~N~l~~~~--~~~l~ 238 (796)
..+++|++|++++|++++.. |..+.
T Consensus 291 ~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 370 (570)
T 2z63_A 291 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370 (570)
T ss_dssp SCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHH
T ss_pred CccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccccc
Confidence 22344444455555544332 34455
Q ss_pred ccCccceEEeccccccccCCccccCCcccceeecccccccccCc-cccccccccccccccCccccCccccccccccccce
Q 003780 239 RLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIP-LELTRLSQLLYLSISSNMLSGQIPITIAGLISLKG 317 (796)
Q Consensus 239 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 317 (796)
++++|++|++++|.+++..+ .+..+++|+.|++++|.+++..| ..+.++++|++|++++|.+.+..|..+.++++|++
T Consensus 371 ~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 371 GTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp TCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred ccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 66677777777777765433 38888999999999999988766 57899999999999999999999999999999999
Q ss_pred ecccccccc-cCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCccc---cccccccccCCC
Q 003780 318 LDLSNNKLS-GPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPPFL---YHRFPLDLSYND 392 (796)
Q Consensus 318 L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~---~~~~~l~l~~N~ 392 (796)
|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..+ .+++|++|++++|++++..|..+ .++..|++++|.
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 999999998 6789999999999999999999999888777 48899999999999998777554 456689999999
Q ss_pred CcccCCC
Q 003780 393 LEGEIPD 399 (796)
Q Consensus 393 l~~~~p~ 399 (796)
++|..|.
T Consensus 530 ~~~~~~~ 536 (570)
T 2z63_A 530 WDCSCPR 536 (570)
T ss_dssp BCCCTTT
T ss_pred ccCCCcc
Confidence 9998885
No 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8e-37 Score=349.41 Aligned_cols=263 Identities=24% Similarity=0.297 Sum_probs=198.3
Q ss_pred hcCCccceeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEe------c
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLH------K 570 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~ 570 (796)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|++++++++||||+++++++.. +
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~--~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP--KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCH--HHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 46899999999999999999975 46899999998765332 234678999999999999999999998765 6
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCc---EEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLE---AFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~D 647 (796)
+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 77899999999999999998765545688899999999999999999999 9999999999999997765 89999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc---CCCCC---chhhhHH
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSS---LSSPS---SDQKIML 721 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~---~~~~~---~~~~~~~ 721 (796)
||.+....... ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||..... +.... .......
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765433 23345799999999999999999999999999999999999999863210 00000 0000000
Q ss_pred HHhhcCC-----CCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 003780 722 IDVLDSR-----LSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVC 766 (796)
Q Consensus 722 ~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 766 (796)
....... ..+............+.+++.+||+.||++|||++|++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0000000 00111112223455688999999999999999998743
No 273
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-36 Score=323.10 Aligned_cols=250 Identities=31% Similarity=0.494 Sum_probs=154.7
Q ss_pred CCCcEEeccCCcccc--cCCcCccCCCCCcEeeccc-CcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 97 PGLESLSLRFNYLFG--SIPSQVGALSKLRYLDFSF-NNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
.+++.|+|++|.+.+ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666666 6666666666666666663 6666666666666666666666666666666666666666666
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
|+|++|.+++.+|..|..+++|++|+|++|++++.+|..+..++ ++|++|+|++|++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-----------------------~~L~~L~L~~N~l 186 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS-----------------------KLFTSMTISRNRL 186 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC-----------------------TTCCEEECCSSEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh-----------------------hcCcEEECcCCee
Confidence 66666666655555555555555555555555544444444444 0455555555555
Q ss_pred cccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCccc
Q 003780 254 NGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEI 333 (796)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 333 (796)
++.+|..+..++ |+.|+|++|++++..|..|..+++|++|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 555555555544 55555555555555555555556666666666666554444 5556677777777777777777777
Q ss_pred CCCCCCcEEEeecccccCCCCccccccccceEEecccc
Q 003780 334 GKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNK 371 (796)
Q Consensus 334 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~ 371 (796)
..+++|+.|+|++|+++|.+|....+++|+.|++++|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 77777777777777777777766556667777777776
No 274
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1e-35 Score=312.45 Aligned_cols=235 Identities=10% Similarity=0.064 Sum_probs=186.8
Q ss_pred hcCCccceeeecccceeEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
.++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999765 5999999999877655445567899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.+. ....++.+++.|+++||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999643 35557888999999999999999 99999999999999999999997433
Q ss_pred CCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchh
Q 003780 657 DSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRM 736 (796)
Q Consensus 657 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (796)
|++| ++.++|||||||++|||+||+.||............ ......... .....
T Consensus 175 -------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----~~~~~~~~~-~~~~~ 228 (286)
T 3uqc_A 175 -------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----ERDTAGQPI-EPADI 228 (286)
T ss_dssp -------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----CBCTTSCBC-CHHHH
T ss_pred -------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----HHHhccCCC-Chhhc
Confidence 3333 688999999999999999999999854332100000 000001000 00011
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhhcCc
Q 003780 737 VMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFLTCKI 774 (796)
Q Consensus 737 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 774 (796)
.......+.+++.+||+.||++| |+.|+++.|++...
T Consensus 229 ~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 229 DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 11122347899999999999999 99999999988654
No 275
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-34 Score=343.52 Aligned_cols=342 Identities=22% Similarity=0.253 Sum_probs=254.6
Q ss_pred eEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCC-----CCCC----CCCCC
Q 003780 74 IIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTG-----SIPP----ELGSL 144 (796)
Q Consensus 74 v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-----~~p~----~~~~l 144 (796)
++.|+++++.+.+..+. .|+.+++|++|+|++|.+.+..|..|.++++|++|+|++|...+ .+|. .|..+
T Consensus 250 L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGND-SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCEEECTTSCCCEECTT-TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCEEECCCCCcCccCcc-cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 66666666666554332 46666666666666666666666666666666666666654432 1222 56667
Q ss_pred CCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCC--CCccccCC--CCccEEEcccccccCcchhhhcCCCCcc
Q 003780 145 RNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGP--IPSAIGDL--NNLLILSLDSNKLSGMLHQELGKLKNLV 220 (796)
Q Consensus 145 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 220 (796)
++|++|+|++|++++..|..|.++++|++|++++|.++.. .+..|..+ ++|+.|++++|+++++.+..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 7777777777777777677777777777777777764422 22333333 4677778888888888888999999999
Q ss_pred ccccCCccccccCC-CcccccCccceEEeccccccccCCccccCCcccceeeccccccc--ccCcccccccccccccccc
Q 003780 221 ALNVGGNKLMGPIP-STLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIE--GTIPLELTRLSQLLYLSIS 297 (796)
Q Consensus 221 ~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~l~ 297 (796)
.|++++|++++.+| ..+.++++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..|.++++|++|+++
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 99999999987665 67888999999999999999888888999999999999999987 5788889999999999999
Q ss_pred CccccCccccccccccccceecccccccccCC--------CcccCCCCCCcEEEeecccccCCCCccc-cccccceEEec
Q 003780 298 SNMLSGQIPITIAGLISLKGLDLSNNKLSGPI--------PPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLS 368 (796)
Q Consensus 298 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~ 368 (796)
+|.+++..+..|.++++|++|+|++|++++.. +..|..+++|+.|+|++|+++...+..+ ++++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 99999888888999999999999999988642 2347888999999999999995444444 58899999999
Q ss_pred ccccCCCCCccc---cccccccccCCCCcccCCCCCC----C-CCccccCCccccc
Q 003780 369 HNKLNGTIPPFL---YHRFPLDLSYNDLEGEIPDYFR----D-SPFKVYGNQGICY 416 (796)
Q Consensus 369 ~N~l~~~~p~~~---~~~~~l~l~~N~l~~~~p~~~~----~-~~~~~~~n~~~c~ 416 (796)
+|++++..+..+ ..+..|+|++|.+++..|..|. . ......+|+..|.
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999985444333 4566899999999987776443 1 1223367777774
No 276
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.9e-34 Score=338.40 Aligned_cols=343 Identities=21% Similarity=0.217 Sum_probs=260.0
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
..++.|+|++|++++ +++..|.++++|++|+|++|+|+++.|++|+++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 368999999999985 5556799999999999999999999899999999999999999999977778899999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCC-CCccccCCCCccEEEcccccccCcchhhhcCCCCcc----ccccCC
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGP-IPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLV----ALNVGG 226 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~l~~ 226 (796)
|++|+|++..+..|+++++|++|+|++|.+++. .|..++.+++|++|+|++|+++++.+..+..+.+++ .++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 999999988888899999999999999999864 678899999999999999999888776665444332 233333
Q ss_pred ccccccCCC-----------------------------------------------------------------------
Q 003780 227 NKLMGPIPS----------------------------------------------------------------------- 235 (796)
Q Consensus 227 N~l~~~~~~----------------------------------------------------------------------- 235 (796)
|.++...+.
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 333211100
Q ss_pred --------------------------------cccccCccceEEeccccccccCCc-------------------cccCC
Q 003780 236 --------------------------------TLFRLTNLTYLYLHSNHLNGSIPP-------------------EIGNM 264 (796)
Q Consensus 236 --------------------------------~l~~l~~L~~L~L~~N~l~~~~p~-------------------~~~~l 264 (796)
.+....+|+.|++.+|.+.+..+. ...++
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 001112233344444333221111 11123
Q ss_pred cccceeecccccc-------------------------------------------------cccC-ccccccccccccc
Q 003780 265 TGILKVDMSMNNI-------------------------------------------------EGTI-PLELTRLSQLLYL 294 (796)
Q Consensus 265 ~~L~~L~Ls~N~l-------------------------------------------------~~~~-p~~l~~l~~L~~L 294 (796)
++|+.|+++.|.+ .... +..|..+++++.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 3444444444433 3222 2346677889999
Q ss_pred cccCccccCccccccccccccceeccccccc-ccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEeccccc
Q 003780 295 SISSNMLSGQIPITIAGLISLKGLDLSNNKL-SGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKL 372 (796)
Q Consensus 295 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l 372 (796)
+++.|.+.+..+..+..+++|+.|+|++|.+ .+..|..|..+++|+.|+|++|+|++..|..+ ++++|++|+|++|+|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 9999999999999999999999999999975 45678899999999999999999999888877 588999999999999
Q ss_pred CCCCCccc---cccccccccCCCCcccCCCCCCCCC--c---cccCCcccc
Q 003780 373 NGTIPPFL---YHRFPLDLSYNDLEGEIPDYFRDSP--F---KVYGNQGIC 415 (796)
Q Consensus 373 ~~~~p~~~---~~~~~l~l~~N~l~~~~p~~~~~~~--~---~~~~n~~~c 415 (796)
++..|..+ .++..|||++|+|++.+|+.|...+ . ...+|+..|
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 97777554 4567899999999999998886543 2 236787776
No 277
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4e-35 Score=338.15 Aligned_cols=180 Identities=21% Similarity=0.235 Sum_probs=154.1
Q ss_pred eeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCC
Q 003780 67 TCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRN 146 (796)
Q Consensus 67 ~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 146 (796)
+|...+ + .++++++++..... + .++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++
T Consensus 3 ~C~~~~-~--c~~~~~~l~~ip~~--~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDASG-V--CDGRSRSFTSIPSG--L--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECTTS-E--EECTTSCCSSCCSC--C--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCc-e--EECCCCcccccccc--C--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 576544 3 78888888754332 2 379999999999999999999999999999999999999988899999999
Q ss_pred CCEEEecCCCCCCCCchhhhccCccceeeccccccCCC-CCccccCCCCccEEEccccc-ccCcchhhhcCCCCcccccc
Q 003780 147 LEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGP-IPSAIGDLNNLLILSLDSNK-LSGMLHQELGKLKNLVALNV 224 (796)
Q Consensus 147 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l 224 (796)
|++|+|++|++++..|..|+++++|++|+|++|.+++. .|..|+++++|++|++++|. +..+.+..|.++++|++|++
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 99999999999998888899999999999999999974 67889999999999999999 55555678999999999999
Q ss_pred CCccccccCCCcccccCccceEEeccccc
Q 003780 225 GGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 225 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
++|++++..|..+..+++|++|+++.|.+
T Consensus 156 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 156 KALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred cCCcccccChhhhhccccCceEecccCcc
Confidence 99999998888877655555444444443
No 278
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.9e-34 Score=305.41 Aligned_cols=234 Identities=21% Similarity=0.298 Sum_probs=179.9
Q ss_pred hcCCccc-eeeecccceeEEEEEc-cCCcEEEEEEeccccchhhHHHHHHHHHHHHH-hhcCCCceeeEEeEEEe----c
Q 003780 498 TEDFDIK-YCIGTGGYGSVYKAQL-PNGKVVALKKLHRAETEETTFFNSFQNEAHVL-SKIAHRNIVKLYGFCLH----K 570 (796)
Q Consensus 498 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~l~~~~~~----~ 570 (796)
.++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4567777 7899999999999975 57899999998642 2567788887 55689999999999987 6
Q ss_pred ceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecC---CCcEEEee
Q 003780 571 KCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNS---KLEAFVAD 647 (796)
Q Consensus 571 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~D 647 (796)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 788999999999999999987532 3589999999999999999999999 9999999999999998 78899999
Q ss_pred eccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcC
Q 003780 648 FGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDS 727 (796)
Q Consensus 648 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (796)
||++.... +..++.++||||+||++|||++|+.||........... ....+..
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-----~~~~~~~ 216 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRM 216 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-----SCCSSCT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-----HHHHHhh
Confidence 99987533 23467899999999999999999999974322110000 0000000
Q ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Q 003780 728 RLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQEFL 770 (796)
Q Consensus 728 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 770 (796)
................+.+++.+||+.||++|||++|+++|-.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 0000000000122345889999999999999999999999753
No 279
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.7e-35 Score=344.88 Aligned_cols=238 Identities=23% Similarity=0.322 Sum_probs=191.1
Q ss_pred hcCCccceeeecccceeEEEEEcc--CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEEecce---
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLP--NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKC--- 572 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--- 572 (796)
.++|++.+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDA--EAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCH--HHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 368999999999999999999764 6899999998764332 234678999999999999999999999988765
Q ss_pred --eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeecc
Q 003780 573 --MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGT 650 (796)
Q Consensus 573 --~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 650 (796)
.++||||+++++|.+++.. .+++..+..++.||++||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999887754 389999999999999999999999 99999999999999986 899999999
Q ss_pred ccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCC
Q 003780 651 ARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLS 730 (796)
Q Consensus 651 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (796)
++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||...... .+.
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------ccc
Confidence 9876543 3456999999999987654 88999999999999999999887632110 000
Q ss_pred CccchhhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHh
Q 003780 731 PPVDRMVMQDIVLVTTVALACLHSKPKFRPT-MQRVCQEFL 770 (796)
Q Consensus 731 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~ 770 (796)
.. .........+.+++.+||+.||++||+ ++++.+.+.
T Consensus 286 ~~--~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 286 ED--DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp TT--CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cc--ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 00 001122245789999999999999996 455555454
No 280
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-35 Score=324.07 Aligned_cols=246 Identities=16% Similarity=0.130 Sum_probs=181.3
Q ss_pred hcCCccceeeecccceeEEEEE-ccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC-Ccee---------eEE--
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQ-LPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH-RNIV---------KLY-- 564 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv---------~l~-- 564 (796)
...|...+.||+|+||+||+|. ..+|+.||||++...........+.+.+|+.+++.++| +|.. ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3457788999999999999997 55799999999985554444445789999999999987 2211 111
Q ss_pred ----------eEEEe-----cceeeEEEeeccCCcHHHHHhhc----CcccccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 003780 565 ----------GFCLH-----KKCMFLIYKYMKRGSLFCFLRND----YEAVVLDWTMRVNIIKCVANALSYLHHDCMPSI 625 (796)
Q Consensus 565 ----------~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 625 (796)
.++.. ....+++|+++ +++|.+++... .....+++..+..++.|+++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111 12356666654 67999888521 1234578889999999999999999999 99
Q ss_pred EEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccccccccCccCcccc----------ccCCcCcchhHHHHHHHHH
Q 003780 626 VHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELA----------YTMVVTEKCDVYSFGVVAL 695 (796)
Q Consensus 626 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DVwSlGv~l~ 695 (796)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999865432 334457 999999998 5666888999999999999
Q ss_pred HHHhCCCCCcccccCCCCCchhhhHHHHhhcCCCCCccchhhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 003780 696 EVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRLSPPVDRMVMQDIVLVTTVALACLHSKPKFRPTMQRVCQE 768 (796)
Q Consensus 696 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 768 (796)
||++|+.||....... .....+.... . ....+.+++.+||+.||++||++.|++++
T Consensus 309 elltg~~Pf~~~~~~~--------~~~~~~~~~~--~-------~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG--------GSEWIFRSCK--N-------IPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHSSCCCCTTGGGS--------CSGGGGSSCC--C-------CCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHCCCCCCCcchhh--------hHHHHHhhcc--c-------CCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999999997433211 0111111111 1 11347899999999999999998888654
No 281
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.7e-34 Score=333.25 Aligned_cols=323 Identities=21% Similarity=0.224 Sum_probs=251.2
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+|++|++++ +++..|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++..+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 478899999999986 5555799999999999999999998888999999999999999999988888899999999999
Q ss_pred ecCCCCCC-CCchhhhccCccceeeccccccCCCCCccccCCCCcc----EEEcccccccCcchh---------------
Q 003780 152 LKGNNLNG-AIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLL----ILSLDSNKLSGMLHQ--------------- 211 (796)
Q Consensus 152 L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~--------------- 211 (796)
|++|++++ .+|..+..+++|++|+|++|+|++..|..|..+.+++ .++++.|.++.+.+.
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999986 4688999999999999999999877776655443322 233333332211100
Q ss_pred --------------------------------------------------------------------------------
Q 003780 212 -------------------------------------------------------------------------------- 211 (796)
Q Consensus 212 -------------------------------------------------------------------------------- 211 (796)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred --------hhc-------------------------------------------CCCCccccccCCcccccc--C-----
Q 003780 212 --------ELG-------------------------------------------KLKNLVALNVGGNKLMGP--I----- 233 (796)
Q Consensus 212 --------~~~-------------------------------------------~l~~L~~L~l~~N~l~~~--~----- 233 (796)
.+. .+++|+.|++++|.+... .
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 011 123333344444333210 0
Q ss_pred ------------------CCcccccCccceEEeccccccccCC-ccccCCcccceeecccccccccCccccccccccccc
Q 003780 234 ------------------PSTLFRLTNLTYLYLHSNHLNGSIP-PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYL 294 (796)
Q Consensus 234 ------------------~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 294 (796)
+..+..+++|+.++++.|+.....+ ..+.++.+++.++++.|.+.+..+..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 1122233344444444444333332 356778899999999999999999999999999999
Q ss_pred cccCcccc-CccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEeccccc
Q 003780 295 SISSNMLS-GQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKL 372 (796)
Q Consensus 295 ~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l 372 (796)
++++|.+. +..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..+ ++++|++|+|++|+|
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 99999854 5678899999999999999999999999999999999999999999999888777 489999999999999
Q ss_pred CCCCCcccc----ccccccccCCCCcc
Q 003780 373 NGTIPPFLY----HRFPLDLSYNDLEG 395 (796)
Q Consensus 373 ~~~~p~~~~----~~~~l~l~~N~l~~ 395 (796)
++..|..+. ++..|+|++|.+.+
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 988887664 45679999999976
No 282
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-33 Score=305.84 Aligned_cols=301 Identities=27% Similarity=0.378 Sum_probs=261.4
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.++++++++... + .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++. +.|.++++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~~-~--~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVASI-Q--GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred ccccEEEEeCCccccc-h--hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEE
Confidence 5688999999988753 3 37889999999999999997644 99999999999999999953 3699999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMG 231 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 231 (796)
|++|++++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 99999996543 8999999999999997665544 48999999999999999997765 8899999999999999986
Q ss_pred cCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccc
Q 003780 232 PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG 311 (796)
Q Consensus 232 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 311 (796)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+++. ..+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 544 8899999999999999996544 8899999999999999997655 89999999999999999864 46889
Q ss_pred ccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCC-cccccccccccc
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIP-PFLYHRFPLDLS 389 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p-~~~~~~~~l~l~ 389 (796)
+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+ .+++|++|++++|++++..| ..+.++..|+++
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~ 341 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 341 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSS
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehh
Confidence 99999999999999865 568899999999999999998877766 48999999999999998777 445677799999
Q ss_pred CCCCc
Q 003780 390 YNDLE 394 (796)
Q Consensus 390 ~N~l~ 394 (796)
+|.++
T Consensus 342 ~N~i~ 346 (347)
T 4fmz_A 342 NQVIK 346 (347)
T ss_dssp CC---
T ss_pred hhccc
Confidence 99875
No 283
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.2e-33 Score=301.54 Aligned_cols=268 Identities=21% Similarity=0.267 Sum_probs=191.0
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
+.|++|+|++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 67888888888888777778888888888888888888777888888888888888888887 4555443 67888888
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccC--cchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSG--MLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
++|++++..+..|.++++|++|++++|.++. ..+..+.++++|++|++++|+++. +|..+. ++|++|+|++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 8888877777777778888888888887753 566677777777777777777774 444433 67777777777777
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
+..|..+.++++|+.|+|++|++++..+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 766777777777777777777777766667777777777777777777 5666677777777777777777766555554
Q ss_pred C------CCCCcEEEeecccccC--CCCccc-cccccceEEecccc
Q 003780 335 K------CSELRNITLRNNNLSG--SIPPEI-GLMKLEYLDLSHNK 371 (796)
Q Consensus 335 ~------l~~L~~L~L~~N~l~~--~~~~~~-~~~~L~~L~l~~N~ 371 (796)
. .+.|+.|++++|.+.. ..|..+ .+.+|+.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3 2566667777776653 233333 25566666666664
No 284
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-33 Score=318.66 Aligned_cols=301 Identities=29% Similarity=0.388 Sum_probs=185.1
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.|+++++.+++..+ +..+++|++|+|++|.+.+..+ ++++++|++|+|++|.+++..+ +.++++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 457777777777766443 6777777777777777776544 7777777777777777775433 77777777777
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMG 231 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 231 (796)
|++|++++. + .+..+++|+.|+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|++++
T Consensus 141 l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 141 LSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp EEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc
Confidence 777777753 2 35555555555553 3333222 256666667777777766654 236666666666666666665
Q ss_pred cCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccc
Q 003780 232 PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG 311 (796)
Q Consensus 232 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 311 (796)
..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|++++|.+++..+ +..
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 285 (466)
T 1o6v_A 214 ITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 285 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTT
T ss_pred ccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccC
Confidence 444 55566666666666666642 245566666666666666665443 5666666666666666665433 556
Q ss_pred ccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCCc--ccccccccccc
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPP--FLYHRFPLDLS 389 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~--~~~~~~~l~l~ 389 (796)
+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| ...+++|+.|++++|++++. +. .+.++..|+++
T Consensus 286 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 286 LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAG 361 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECC
T ss_pred CCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCC
Confidence 6666666666666665333 5566666666666666665443 33455666666666666543 21 22344456666
Q ss_pred CCCCcccCC
Q 003780 390 YNDLEGEIP 398 (796)
Q Consensus 390 ~N~l~~~~p 398 (796)
+|++++.+|
T Consensus 362 ~n~l~~~~~ 370 (466)
T 1o6v_A 362 HNQISDLTP 370 (466)
T ss_dssp SSCCCBCGG
T ss_pred CCccCccch
Confidence 666665554
No 285
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.9e-33 Score=302.27 Aligned_cols=267 Identities=21% Similarity=0.257 Sum_probs=210.2
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 67888999999988888888889999999999999988877888888999999999999888 5555554 78888889
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccC--cchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSG--MLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
++|++++..+..|.++++|++|++++|.++. ..+..+..+ +|+.|++++|++++ +|..+. ++|++|+|++|+++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 9888887777788888888888888888863 667777777 88888888888885 454443 67888888888888
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
+..+..+.++++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 777778888888888888888888777777888888888888888887 6777788888888888888888877666665
Q ss_pred CC------CCCcEEEeeccccc--CCCCccc-cccccceEEecccc
Q 003780 335 KC------SELRNITLRNNNLS--GSIPPEI-GLMKLEYLDLSHNK 371 (796)
Q Consensus 335 ~l------~~L~~L~L~~N~l~--~~~~~~~-~~~~L~~L~l~~N~ 371 (796)
.. ++|+.|++++|.+. +..|..+ .+++|+.|++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 43 56777888888776 4444444 36677777777764
No 286
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.4e-35 Score=315.68 Aligned_cols=245 Identities=16% Similarity=0.148 Sum_probs=187.9
Q ss_pred hcCCccceeeecccceeEEEEEccCCcEEEEEEeccccch-----hhHHHHHHHHHHHHHhhcC---------CCceeeE
Q 003780 498 TEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETE-----ETTFFNSFQNEAHVLSKIA---------HRNIVKL 563 (796)
Q Consensus 498 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~---------hpniv~l 563 (796)
.++|++.+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 6899999999876432 1222467889999988886 7777777
Q ss_pred EeEEE------------------------------ecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHH
Q 003780 564 YGFCL------------------------------HKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANA 613 (796)
Q Consensus 564 ~~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 613 (796)
.+.+. .++..++||||+++|++.+.+.+ ..+++..+..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 77643 26789999999999977666643 247999999999999999
Q ss_pred HHHHh-hcCCCCeEEecCCCCCeEecCCC--------------------cEEEeeeccccccCCCCCCccccccccCccC
Q 003780 614 LSYLH-HDCMPSIVHRDISSNNILLNSKL--------------------EAFVADFGTARLLDSDSSNRTIVAGTYGYIA 672 (796)
Q Consensus 614 L~~LH-~~~~~~ivH~dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~a 672 (796)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCcCcchhHHHHHHH-HHHHHhCCCCCcccccCCCCCchhhhHHHHhhcCCC--CCccchhhHHHHHHHHHHHH
Q 003780 673 PELAYTMVVTEKCDVYSFGVV-ALEVLMGRHPGELLSSLSSPSSDQKIMLIDVLDSRL--SPPVDRMVMQDIVLVTTVAL 749 (796)
Q Consensus 673 PE~~~~~~~~~~~DVwSlGv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~ 749 (796)
||++.+.. +.++||||+|++ .+++++|..||.... .............. ..............+.+++.
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~ 317 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-------WLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHR 317 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-------HHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-------hhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHH
Confidence 99998766 889999998777 788999999975211 00111112221111 11112223344567899999
Q ss_pred HcCCCCCCCCCCHHHHH-HH
Q 003780 750 ACLHSKPKFRPTMQRVC-QE 768 (796)
Q Consensus 750 ~cl~~dP~~RPs~~evl-~~ 768 (796)
+||+.| |++|++ +|
T Consensus 318 ~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 318 TMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HGGGSS-----SHHHHHHHC
T ss_pred HHhccC-----CHHHHHhcC
Confidence 999976 999998 65
No 287
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-33 Score=311.02 Aligned_cols=289 Identities=18% Similarity=0.151 Sum_probs=257.0
Q ss_pred CCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 95 CFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999998777778999999999999999998888899999999999999999999989999999999999
Q ss_pred eccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++|+++...+..|.++++|++|+|++|.+++..+..+.++++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999977777789999999999999999999999999999999999999999865 3677899999999999998
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
+ +...++|+.|++++|.++.. |.. ..++|+.|++++|.+++. ..+..+++|++|+|++|.+++..|..|.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 5 23456899999999999965 332 247999999999999964 5789999999999999999999999999
Q ss_pred CCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcc---ccccccccccCCCCcccC
Q 003780 335 KCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPF---LYHRFPLDLSYNDLEGEI 397 (796)
Q Consensus 335 ~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~---~~~~~~l~l~~N~l~~~~ 397 (796)
.+++|+.|+|++|++++..+....+++|++|++++|+++ .+|.. +.++..|++++|.++...
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~ 334 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 334 (390)
T ss_dssp TCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred ccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC
Confidence 999999999999999975443446899999999999998 45654 356778999999998654
No 288
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.3e-33 Score=297.52 Aligned_cols=284 Identities=22% Similarity=0.305 Sum_probs=242.7
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
++.++++++.+.. +|..+. ++|++|+|++|.|++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 33 l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 4555666666653 454443 6899999999999988888999999999999999999988899999999999999999
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccc--cCCCcccccCccceEEecccccccc
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMG--PIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
|+++. +|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++. ..+..+.++++|++|++++|+++ .
T Consensus 110 n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~ 185 (330)
T 1xku_A 110 NQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-T 185 (330)
T ss_dssp SCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-S
T ss_pred CcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-c
Confidence 99995 454443 799999999999999999999999999999999999964 77889999999999999999999 4
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCC
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKC 336 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 336 (796)
+|..+. ++|+.|++++|++++..|..|..+++|++|++++|.+++..+..+..+++|++|+|++|+++ .+|..+..+
T Consensus 186 l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 186 IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 666554 79999999999999998999999999999999999999888889999999999999999999 788899999
Q ss_pred CCCcEEEeecccccCCCCcccc-------ccccceEEecccccCC-CCC-ccc---cccccccccCCC
Q 003780 337 SELRNITLRNNNLSGSIPPEIG-------LMKLEYLDLSHNKLNG-TIP-PFL---YHRFPLDLSYND 392 (796)
Q Consensus 337 ~~L~~L~L~~N~l~~~~~~~~~-------~~~L~~L~l~~N~l~~-~~p-~~~---~~~~~l~l~~N~ 392 (796)
++|+.|+|++|++++..+..+. ...|+.|++++|++.. .++ ..+ ..+..++|++|+
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 9999999999999987666552 3678999999999863 233 333 335578888774
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-33 Score=327.62 Aligned_cols=307 Identities=18% Similarity=0.145 Sum_probs=266.3
Q ss_pred CCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 95 CFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
.+++++.|++++|.+....+..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36789999999999998888889999999999999999998888899999999999999999999999999999999999
Q ss_pred eccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|+.|+|++|.+++. .+..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccc
Confidence 9999999988888889999999999999999999999999999999999999999975 3667899999999999998
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
+ +...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|+
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 5 344568999999999998654433 2689999999999997 47889999999999999999999999999
Q ss_pred CCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcc---ccccccccccCCCCcccCCCCCCCC-CccccC
Q 003780 335 KCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPF---LYHRFPLDLSYNDLEGEIPDYFRDS-PFKVYG 410 (796)
Q Consensus 335 ~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~---~~~~~~l~l~~N~l~~~~p~~~~~~-~~~~~~ 410 (796)
.+++|+.|+|++|++++..+....+++|+.|+|++|+++ .+|.. +.++..|+|++|.+.+..+..+... .....+
T Consensus 276 ~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 276 KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSH 354 (597)
T ss_dssp TCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCS
T ss_pred CccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeC
Confidence 999999999999999985433345899999999999999 56654 3567789999999987654433221 122356
Q ss_pred Ccccc
Q 003780 411 NQGIC 415 (796)
Q Consensus 411 n~~~c 415 (796)
|+..|
T Consensus 355 N~~~~ 359 (597)
T 3oja_B 355 NDWDC 359 (597)
T ss_dssp SCEEH
T ss_pred CCCCC
Confidence 65544
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.5e-33 Score=299.36 Aligned_cols=284 Identities=23% Similarity=0.327 Sum_probs=243.5
Q ss_pred CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecc
Q 003780 98 GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALS 177 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (796)
+++.++++++.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4566777777776 4455553 689999999999998888899999999999999999998889999999999999999
Q ss_pred ccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc--ccCCCcccccCccceEEeccccccc
Q 003780 178 RNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM--GPIPSTLFRLTNLTYLYLHSNHLNG 255 (796)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (796)
+|+++. +|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 999995 454444 89999999999999998889999999999999999996 4778888888 99999999999995
Q ss_pred cCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCC
Q 003780 256 SIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGK 335 (796)
Q Consensus 256 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 335 (796)
+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|+|++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 666554 79999999999999988899999999999999999999988889999999999999999999 78888999
Q ss_pred CCCCcEEEeecccccCCCCcccc-------ccccceEEecccccC--CCCCccc---cccccccccCCC
Q 003780 336 CSELRNITLRNNNLSGSIPPEIG-------LMKLEYLDLSHNKLN--GTIPPFL---YHRFPLDLSYND 392 (796)
Q Consensus 336 l~~L~~L~L~~N~l~~~~~~~~~-------~~~L~~L~l~~N~l~--~~~p~~~---~~~~~l~l~~N~ 392 (796)
+++|+.|+|++|++++..+..+. ..+|+.|++++|++. +..|..+ .++..+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 99999999999999977665552 357999999999987 3344433 335567887764
No 291
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-33 Score=313.70 Aligned_cols=300 Identities=27% Similarity=0.379 Sum_probs=262.3
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.+++.++++.. ++ .+..+++|++|+|++|.+.+..+ ++++++|++|+|++|.+++..+ ++++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~--~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc--chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 468899999998875 43 37889999999999999997755 9999999999999999997655 99999999999
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMG 231 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 231 (796)
|++|++++..+ +.++++|++|++++|.+++. + .+..+++|++|+++ |.+.+..+ +.++++|+.|++++|.+++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 99999997643 99999999999999999964 3 58999999999997 56665543 9999999999999999986
Q ss_pred cCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccc
Q 003780 232 PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG 311 (796)
Q Consensus 232 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 311 (796)
. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|++|++++|.+++..+ +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 4 358899999999999999997655 78899999999999999964 468899999999999999997765 889
Q ss_pred ccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCC-ccccccccccccC
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIP-PFLYHRFPLDLSY 390 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p-~~~~~~~~l~l~~ 390 (796)
+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ ...+++|+.|++++|++++..| ..+.++..|++++
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 340 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCS
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCC
Confidence 9999999999999997544 8899999999999999997544 4568999999999999998766 3456677899999
Q ss_pred CCCccc
Q 003780 391 NDLEGE 396 (796)
Q Consensus 391 N~l~~~ 396 (796)
|.+++.
T Consensus 341 n~l~~~ 346 (466)
T 1o6v_A 341 NKVSDV 346 (466)
T ss_dssp SCCCCC
T ss_pred CccCCc
Confidence 999885
No 292
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.6e-33 Score=309.26 Aligned_cols=303 Identities=21% Similarity=0.191 Sum_probs=256.8
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEE
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVL 150 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 150 (796)
..+++.|+++++++++. +++.+++|++|+|++|.+++. + ++++++|++|+|++|.+++. | ++.+++|++|
T Consensus 63 l~~L~~L~Ls~n~l~~~----~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L 132 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTL----DLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYL 132 (457)
T ss_dssp CTTCSEEECCSSCCSCC----CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred cCCCCEEEccCCcCCeE----ccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEE
Confidence 35789999999999884 389999999999999999985 3 99999999999999999974 4 8999999999
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
+|++|++++. + ++++++|++|++++|+..+.+ .+..+++|++|++++|+++++. ++.+++|+.|++++|+++
T Consensus 133 ~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 133 NCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp ECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCC
Confidence 9999999974 3 889999999999999766555 4888999999999999999863 889999999999999999
Q ss_pred ccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCcccccccc-------ccccccccCccccC
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLS-------QLLYLSISSNMLSG 303 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-------~L~~L~l~~N~l~~ 303 (796)
+. .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++..+..+.+++ +|+.|++++|.+.+
T Consensus 205 ~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~ 278 (457)
T 3bz5_A 205 KL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLI 278 (457)
T ss_dssp CC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred ee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCC
Confidence 75 38889999999999999997 66 88999999999999999988776676665 67888888888887
Q ss_pred ccccccccccccceecccccccccCCCc--------ccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCC
Q 003780 304 QIPITIAGLISLKGLDLSNNKLSGPIPP--------EIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGT 375 (796)
Q Consensus 304 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~ 375 (796)
.+| +..+++|+.|++++|.+.+.+|. .+..+++|+.|++++|++++. + ...+++|+.|++++|++++
T Consensus 279 ~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~l~~- 353 (457)
T 3bz5_A 279 YFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKLKSLSCVNAHIQD- 353 (457)
T ss_dssp EEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTCSEEECCSSCCCB-
T ss_pred ccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccCCcCcEEECCCCCCCC-
Confidence 777 56789999999999987766554 356678999999999999984 3 4468899999999999986
Q ss_pred CCc--cc-------------cccccccccCCCCcccCCCCCC
Q 003780 376 IPP--FL-------------YHRFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 376 ~p~--~~-------------~~~~~l~l~~N~l~~~~p~~~~ 402 (796)
+|. .+ ..+..+++++|+|+|.+|..+.
T Consensus 354 l~~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 354 FSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CTTGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTTCB
T ss_pred ccccccccccCCcEEecceeeecCccccccCcEEEEcChhHh
Confidence 331 11 1234578888888888887543
No 293
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.3e-34 Score=304.34 Aligned_cols=277 Identities=22% Similarity=0.254 Sum_probs=169.5
Q ss_pred CCchHHHhhcHHHHHHhh---cCCccccCCCCCCCCCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEe
Q 003780 27 TTDDICVAAFELEREALV---NSSWWSNLIDSNSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLS 103 (796)
Q Consensus 27 ~~~~~~~~~~~~~~~~l~---~~~w~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~ 103 (796)
.++..++.+++....+-- .++|-.. ...+.++|.|.|++|+.... .+. ....++++.|+
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~--~~~~~~~~~~~g~~~~~~~~-------------~l~---~~~~~~l~~L~ 87 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQA--NSNNPQIETRTGRALKATAD-------------LLE---DATQPGRVALE 87 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHH--TTTCTTSCCSHHHHHHHHHH-------------HHH---HHTSTTCCEEE
T ss_pred chHHHHHHHHHHhccCCchhhhhhhccc--ccccccccccCCcchhhhHH-------------HHh---cccccceeEEE
Confidence 345566667665432110 0233211 12357899999999963210 000 12246778888
Q ss_pred ccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCC
Q 003780 104 LRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHG 183 (796)
Q Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 183 (796)
|++|.+. .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..+.++++|++|+|++|++.+
T Consensus 88 L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~ 164 (328)
T 4fcg_A 88 LRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELT 164 (328)
T ss_dssp EESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCC
T ss_pred ccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcc
Confidence 8888887 66777888999999999999988 78888888999999999999988 778888889999999999988888
Q ss_pred CCCccccC---------CCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 184 PIPSAIGD---------LNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 184 ~~p~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
.+|..+.. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|+|++|++
T Consensus 165 ~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~- 241 (328)
T 4fcg_A 165 ELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA- 241 (328)
T ss_dssp CCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT-
T ss_pred ccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc-
Confidence 88876654 555555555555554 333444444445555555544442 333344444444444444444
Q ss_pred ccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccC
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
.+.+|..+.++++|++|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..++
T Consensus 242 -----------------------~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 242 -----------------------LRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp -----------------------CCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred -----------------------hhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 444444444445555555555544445555555555555555555555555555555
Q ss_pred CCCCCcEEEeeccccc
Q 003780 335 KCSELRNITLRNNNLS 350 (796)
Q Consensus 335 ~l~~L~~L~L~~N~l~ 350 (796)
.+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 5555555555544443
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-32 Score=308.36 Aligned_cols=296 Identities=20% Similarity=0.207 Sum_probs=257.3
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEE
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVL 150 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 150 (796)
-.+++.|+++++++++. + .|..+++|++|+|++|++++. | ++.+++|++|+|++|.|++. | ++++++|++|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred cCCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 35799999999999975 3 589999999999999999985 4 99999999999999999975 3 8999999999
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
+|++|++++. | ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .++.+++|+.|++++|+++
T Consensus 112 ~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 112 NCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp ECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccc
Confidence 9999999974 4 89999999999999999985 3 889999999999999655554 5889999999999999999
Q ss_pred ccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
+. | +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|++|++++|++++..+..+.
T Consensus 184 ~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 184 EL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp CC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCT
T ss_pred ee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCC
Confidence 74 4 88899999999999999975 38899999999999999998 56 88999999999999999987766666
Q ss_pred ccc-------ccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc---------cccccceEEecccccCC
Q 003780 311 GLI-------SLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI---------GLMKLEYLDLSHNKLNG 374 (796)
Q Consensus 311 ~l~-------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---------~~~~L~~L~l~~N~l~~ 374 (796)
.+. +|+.|++++|.+.+.+| ++.+++|+.|+|++|.+.+.+|... ++++|++|++++|++++
T Consensus 255 ~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 255 KLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp TCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 665 66788888888877776 5788999999999999887766421 35689999999999998
Q ss_pred CCC-ccccccccccccCCCCcc
Q 003780 375 TIP-PFLYHRFPLDLSYNDLEG 395 (796)
Q Consensus 375 ~~p-~~~~~~~~l~l~~N~l~~ 395 (796)
. | ..+.++..|++++|++++
T Consensus 333 l-~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 333 L-DVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp C-CCTTCTTCSEEECCSSCCCB
T ss_pred c-ccccCCcCcEEECCCCCCCC
Confidence 4 4 334567789999999997
No 295
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3e-32 Score=294.94 Aligned_cols=282 Identities=23% Similarity=0.331 Sum_probs=248.9
Q ss_pred CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEE
Q 003780 71 ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVL 150 (796)
Q Consensus 71 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 150 (796)
..+++.|+++++.+++..+ |..+++|++|+|++|.+.+. +.|..+++|++|+|++|.+++..+ +..+++|++|
T Consensus 65 ~~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L 137 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSL 137 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEE
T ss_pred cCCccEEEccCCccccchh---hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEE
Confidence 3579999999999886433 89999999999999999874 469999999999999999996533 8999999999
Q ss_pred EecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 151 NLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.++
T Consensus 138 ~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 212 (347)
T 4fmz_A 138 NLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQIT 212 (347)
T ss_dssp ECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCC
Confidence 999997765544 49999999999999999986654 8899999999999999997755 899999999999999999
Q ss_pred ccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 231 GPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 231 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|++|++++|.+++. ..+.
T Consensus 213 ~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 213 DITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred CCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 7654 8899999999999999996444 89999999999999999974 4689999999999999999975 4688
Q ss_pred cccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccC
Q 003780 311 GLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLN 373 (796)
Q Consensus 311 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~ 373 (796)
.+++|+.|++++|++++..|..+..+++|+.|+|++|++++..| ...+++|++|++++|+++
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhccc
Confidence 99999999999999999999999999999999999999998666 556899999999999986
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=301.58 Aligned_cols=286 Identities=20% Similarity=0.229 Sum_probs=198.5
Q ss_pred CCCCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCC
Q 003780 57 SSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGS 136 (796)
Q Consensus 57 ~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 136 (796)
....|.|.|+ |+. ++++++. ++. .-.++|++|+|++|++.+..+..|.++++|++|+|++|.+++.
T Consensus 26 ~~~~C~~~~~-c~~---------~~~~l~~-iP~---~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 26 ASLSCDRNGI-CKG---------SSGSLNS-IPS---GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp -CCEECTTSE-EEC---------CSTTCSS-CCT---TCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCCCeE-eeC---------CCCCccc-ccc---cccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 3467999998 754 3444443 222 2236899999999999988777899999999999999999988
Q ss_pred CCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCC-ccccCCCCccEEEcccc-cccCcchhhhc
Q 003780 137 IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIP-SAIGDLNNLLILSLDSN-KLSGMLHQELG 214 (796)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~ 214 (796)
.|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++| .++...+..+.
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 171 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHcc
Confidence 88889999999999999999997666678899999999999999986555 57888899999999988 47767677788
Q ss_pred CCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCcccccc---cccc
Q 003780 215 KLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTR---LSQL 291 (796)
Q Consensus 215 ~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~---l~~L 291 (796)
++++|++|++++|++++..|..+.++++|++|++++|+++...+..+..+++|+.|++++|++++..+..+.. .+.+
T Consensus 172 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l 251 (353)
T 2z80_A 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLI 251 (353)
T ss_dssp TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCC
T ss_pred CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchh
Confidence 8888888888888888777777888888888888888876433333445677777777777777654443321 2333
Q ss_pred ccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcc-c-cccccceEEecc
Q 003780 292 LYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPE-I-GLMKLEYLDLSH 369 (796)
Q Consensus 292 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~-~~~~L~~L~l~~ 369 (796)
+.+++++|.+++ |.+. .+|..+..+++|+.|+|++|+++ .+|.. + .+++|++|++++
T Consensus 252 ~~l~L~~~~l~~-------------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 310 (353)
T 2z80_A 252 KKFTFRNVKITD-------------------ESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHT 310 (353)
T ss_dssp CEEEEESCBCCH-------------------HHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred hccccccccccC-------------------cchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeC
Confidence 444444433332 1111 23445555556666666666665 33332 2 355666666666
Q ss_pred cccCCCCC
Q 003780 370 NKLNGTIP 377 (796)
Q Consensus 370 N~l~~~~p 377 (796)
|++++..|
T Consensus 311 N~~~~~~~ 318 (353)
T 2z80_A 311 NPWDCSCP 318 (353)
T ss_dssp SCBCCCHH
T ss_pred CCccCcCC
Confidence 66665544
No 297
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.9e-32 Score=287.18 Aligned_cols=231 Identities=23% Similarity=0.242 Sum_probs=163.1
Q ss_pred CCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCC--CchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 121 SKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGA--IPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
++|++|+|++|.++...+..|.++++|++|+|++|+++.. .|..+..+++|++|+|++|.+++ +|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEE
Confidence 4667777777777644444567777777777777777632 25666667777777777777763 45567777777777
Q ss_pred EcccccccCcch-hhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccc-cCCccccCCcccceeeccccc
Q 003780 199 SLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNG-SIPPEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 199 ~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 276 (796)
++++|++++..+ ..+..+++|++|++++|.+++..+..+.++++|++|+|++|.+++ .+|..+..+++|+.|+|++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 777777776655 567777777777777777776667777777777777777777765 466677777777777777777
Q ss_pred ccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCC-CCcEEEeecccccCC
Q 003780 277 IEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCS-ELRNITLRNNNLSGS 352 (796)
Q Consensus 277 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 352 (796)
+++..|..|..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..+..++ +|+.|+|++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 7776677777777777777777777766666677777777777777777777777777764 677777777777654
No 298
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1e-31 Score=300.36 Aligned_cols=295 Identities=24% Similarity=0.326 Sum_probs=165.0
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCC-------------cEeecccCcCCCC--
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKL-------------RYLDFSFNNLTGS-- 136 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~Ls~n~l~~~-- 136 (796)
.++..++++++++ |.+|. .++++++|++|++++|.+.|.+|..++++.+| ++|++++|.+++.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 4567777888887 67765 37788888888888888777777777766542 5555555554431
Q ss_pred -----------------CCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEE
Q 003780 137 -----------------IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILS 199 (796)
Q Consensus 137 -----------------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 199 (796)
+|.. +++|++|+|++|++++. |.. .++|++|++++|++++ +| .|+++++|++|+
T Consensus 89 ~~~~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CCTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CcCCCCEEEccCCcCCccccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 3322 13455555555554431 111 1577788888888776 55 477888888888
Q ss_pred cccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccc
Q 003780 200 LDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEG 279 (796)
Q Consensus 200 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 279 (796)
+++|+++++ |.. ..+|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++|+.|++++|+++
T Consensus 160 l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKKL-PDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSCC-CCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCccc-CCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 888887763 332 2477777777777775 44 47777777777777777774 44322 46677777777776
Q ss_pred cCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccC--CCCccc
Q 003780 280 TIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSG--SIPPEI 357 (796)
Q Consensus 280 ~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~ 357 (796)
.+| .+..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|+.|++++|++++ .+|...
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L 299 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNL 299 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTC
T ss_pred ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcC
Confidence 455 36667777777777777664 3322 2456666666666554 3322 2445555555555554 222111
Q ss_pred --------------cc-cccceEEecccccCCCCCccccccccccccCCCCcccCCC
Q 003780 358 --------------GL-MKLEYLDLSHNKLNGTIPPFLYHRFPLDLSYNDLEGEIPD 399 (796)
Q Consensus 358 --------------~~-~~L~~L~l~~N~l~~~~p~~~~~~~~l~l~~N~l~~~~p~ 399 (796)
.+ .+|++|++++|++++ +|..+.++..|++++|.+++ +|.
T Consensus 300 ~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~~~~L~~L~L~~N~l~~-lp~ 354 (454)
T 1jl5_A 300 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERLIASFNHLAE-VPE 354 (454)
T ss_dssp CEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC
T ss_pred CEEECcCCcCCcccCCcCcCCEEECCCCcccc-ccccCCcCCEEECCCCcccc-ccc
Confidence 11 367777777777775 66666667777777777774 444
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=8.7e-33 Score=293.63 Aligned_cols=252 Identities=22% Similarity=0.255 Sum_probs=223.2
Q ss_pred ccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCC--CC
Q 003780 61 CKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGS--IP 138 (796)
Q Consensus 61 C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~p 138 (796)
|.|++|.|+..+ ++. ++. .-.++|++|+|++|.+....+..|+++++|++|+|++|.++.. .|
T Consensus 7 C~~~~l~c~~~~-----------l~~-ip~---~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNSKG-----------LTS-VPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCSSC-----------CSS-CCS---CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCCCC-----------ccc-CCC---CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 789999997532 221 111 2236899999999999977777789999999999999999833 36
Q ss_pred CCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCC-ccccCCCCccEEEcccccccCcchhhhcCCC
Q 003780 139 PELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIP-SAIGDLNNLLILSLDSNKLSGMLHQELGKLK 217 (796)
Q Consensus 139 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 217 (796)
..+.++++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+.+++
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 150 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 150 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc
Confidence 67778999999999999998 567789999999999999999997765 6899999999999999999999999999999
Q ss_pred CccccccCCccccc-cCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccc
Q 003780 218 NLVALNVGGNKLMG-PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSI 296 (796)
Q Consensus 218 ~L~~L~l~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 296 (796)
+|++|++++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|++|+|
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 99999999999987 67889999999999999999999888999999999999999999999888888999999999999
Q ss_pred cCccccCcccccccccc-ccceecccccccccC
Q 003780 297 SSNMLSGQIPITIAGLI-SLKGLDLSNNKLSGP 328 (796)
Q Consensus 297 ~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~ 328 (796)
++|.+++..|..+..++ +|++|+|++|.+++.
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 99999999999999985 999999999999864
No 300
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.7e-30 Score=290.48 Aligned_cols=280 Identities=25% Similarity=0.322 Sum_probs=152.6
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEE
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLN 151 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 151 (796)
.+++.++++++.+++ ++. .+++|++|++++|.+.+. |.. .++|++|+|++|.+++ +| .|+++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~----~~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPE----LPQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCC----CCTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-ccc----ccCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 456777777777766 332 135666666666666642 211 1567777777777764 55 467777777777
Q ss_pred ecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccc
Q 003780 152 LKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMG 231 (796)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 231 (796)
+++|++++ +|..+ ++|++|++++|++++ +| .|+++++|++|++++|+++++ |.. .++|++|++++|+++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcCCcCC-
Confidence 77777664 44332 466777777777665 34 466677777777777766653 221 246666666666666
Q ss_pred cCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccc
Q 003780 232 PIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG 311 (796)
Q Consensus 232 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 311 (796)
.+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|.+++. |..
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~--- 295 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL--- 295 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---
T ss_pred ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---
Confidence 444 36666667777777766664 4432 2566666666666664 3332 25566666666666541 110
Q ss_pred ccccceecccccccccCCCcccCCC-CCCcEEEeecccccCCCCccccccccceEEecccccCCCCCccccccccccccC
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKC-SELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLYHRFPLDLSY 390 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~l~~ 390 (796)
.++|++|++++|++++. + .+ ++|+.|++++|++++ +|.. +++|++|++++|+++ .+|..+.++..|++++
T Consensus 296 ~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~--~~~L~~L~L~~N~l~-~lp~~l~~L~~L~L~~ 366 (454)
T 1jl5_A 296 PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL--PPRLERLIASFNHLA-EVPELPQNLKQLHVEY 366 (454)
T ss_dssp CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCS-CCCCCCTTCCEEECCS
T ss_pred CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc--CCcCCEEECCCCccc-cccchhhhccEEECCC
Confidence 12344444444444321 1 11 244445555444443 2322 234444444444444 2333333344444444
Q ss_pred CCCcc
Q 003780 391 NDLEG 395 (796)
Q Consensus 391 N~l~~ 395 (796)
|.+++
T Consensus 367 N~l~~ 371 (454)
T 1jl5_A 367 NPLRE 371 (454)
T ss_dssp SCCSS
T ss_pred CCCCc
Confidence 44444
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=290.91 Aligned_cols=270 Identities=22% Similarity=0.209 Sum_probs=165.8
Q ss_pred EEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccc
Q 003780 101 SLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNG 180 (796)
Q Consensus 101 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 180 (796)
..++++++++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 35 ~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (353)
T 2z80_A 35 ICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111 (353)
T ss_dssp EEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCc
Confidence 35666777763 344343 467777777777776555567777777777777777776666666666666666666666
Q ss_pred cCCCCCccccCCCCccEEEcccccccCcch-hhhcCCCCccccccCCc-cccccCCCcccccCccceEEeccccccccCC
Q 003780 181 LHGPIPSAIGDLNNLLILSLDSNKLSGMLH-QELGKLKNLVALNVGGN-KLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 181 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
+++..+..|.++++|++|+|++|+++++.+ ..+.++++|++|++++| .+++..+..+.++++|++|++++|++++..|
T Consensus 112 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp CSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 665544456666666666666666654433 34555555555555555 2443444445555555555555555554444
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCccc---CC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEI---GK 335 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~ 335 (796)
..+.+ +++|++|++++|.++...+..+..+++|+.|++++|++++..+..+ ..
T Consensus 192 ~~l~~------------------------l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 192 KSLKS------------------------IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTT------------------------CSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHHhc------------------------cccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 44444 4455555555554443222233345555555566665555443333 23
Q ss_pred CCCCcEEEeecccccC----CCCccc-cccccceEEecccccCCCCCccc----cccccccccCCCCcccCC
Q 003780 336 CSELRNITLRNNNLSG----SIPPEI-GLMKLEYLDLSHNKLNGTIPPFL----YHRFPLDLSYNDLEGEIP 398 (796)
Q Consensus 336 l~~L~~L~L~~N~l~~----~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~----~~~~~l~l~~N~l~~~~p 398 (796)
.+.++.++|++|.+++ .+|..+ .+++|+.|++++|+++ .+|..+ .++..|++++|.+.+..|
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5678889999998886 345544 4789999999999999 677543 456689999999998776
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.7e-31 Score=278.98 Aligned_cols=268 Identities=23% Similarity=0.190 Sum_probs=155.9
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.++.+++.+..+ |..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 4567777766633 4322 356777777777777666666777777777777777777666666666666666666666
Q ss_pred c-cCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC
Q 003780 180 G-LHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 180 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
. ++...|..|..+++|++|+|++|.+++..+..+.++++|++|++++|++++..+..+..+++|++|+|++|++++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--- 167 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS--- 167 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE---
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc---
Confidence 5 555556666666666666666666665555555555555555555555554444445555555555555555543
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSE 338 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 338 (796)
..+..|..+++|++|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 168 ---------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 168 ---------------------VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp ---------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred ---------------------cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 33334444455555555555555444555555555666666666666544455666666
Q ss_pred CcEEEeecccccCCCCccccccccceEEecccccCCCCCccccccccccccCCCCc
Q 003780 339 LRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLYHRFPLDLSYNDLE 394 (796)
Q Consensus 339 L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~l~~N~l~ 394 (796)
|+.|+|++|.+....+...-...++.+..+.|.+.+..|+.+......++..++|+
T Consensus 227 L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~ 282 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ 282 (285)
T ss_dssp CCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSC
T ss_pred cCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhc
Confidence 66677766666654332222233555556667776666665544433344444443
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=8.8e-31 Score=275.11 Aligned_cols=255 Identities=22% Similarity=0.247 Sum_probs=223.1
Q ss_pred EEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 75 IEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 75 ~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
+.+++++++++.... +..++|++|+|++|.+.+..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~~ip~----~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPV----GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSSCCT----TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcccCCc----CCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 567777777765322 3357999999999999998888999999999999999999988899999999999999999
Q ss_pred CC-CCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccC
Q 003780 155 NN-LNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPI 233 (796)
Q Consensus 155 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 233 (796)
|+ ++...|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 88777899999999999999999999998999999999999999999999998889999999999999999999887
Q ss_pred CCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccccc
Q 003780 234 PSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLI 313 (796)
Q Consensus 234 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 313 (796)
+..+..+++|++|+|++|++++..|..+.++++|+.|+|++|++++..+..+..+++|++|++++|.+....+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 778999999999999999999988999999999999999999999888788999999999999999998644322 2224
Q ss_pred ccceecccccccccCCCcccC
Q 003780 314 SLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 314 ~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
.++.+..+.+.+....|..+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGT
T ss_pred HHHhcccccCccccCCchHhC
Confidence 456666666666666665544
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.1e-30 Score=290.88 Aligned_cols=230 Identities=23% Similarity=0.206 Sum_probs=147.1
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|++|+|++|+|.+..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45666666666666666666666666666666666666666666666666666666666666555555666666666666
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|++++..+..|.++++|++|+|++| |.+....+..|.++++|++|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~-----------------------~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGEL-----------------------KKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCC-----------------------TTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCC-----------------------CCccccChhhccCCCCCCEEECCCCcccc-
Confidence 666665555555555555555555552 22222223345555555555555555553
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCC
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKC 336 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 336 (796)
+| .+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+
T Consensus 211 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 211 MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 23 35556666666666666666666666667777777777777776667777777777777777777776666777778
Q ss_pred CCCcEEEeecccccC
Q 003780 337 SELRNITLRNNNLSG 351 (796)
Q Consensus 337 ~~L~~L~L~~N~l~~ 351 (796)
++|+.|+|++|.+..
T Consensus 290 ~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 290 RYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEccCCCcCC
Confidence 888888888887764
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.4e-30 Score=277.06 Aligned_cols=235 Identities=21% Similarity=0.259 Sum_probs=212.6
Q ss_pred CCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 119 ALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 119 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
...++++|+|++|.++ .+|..+.++++|++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..|.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999999 78888999999999999999999 88999999999999999999999 778889999999999
Q ss_pred EcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccccc
Q 003780 199 SLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIE 278 (796)
Q Consensus 199 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 278 (796)
+|++|++.+.+|..+... ..+..+.++++|++|+|++|+++ .+|..++++++|+.|+|++|+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999988887777655431 12345778999999999999999 78888999999999999999999
Q ss_pred ccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCcccc
Q 003780 279 GTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIG 358 (796)
Q Consensus 279 ~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 358 (796)
+ +|..+..+++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 5 566799999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred -ccccceEEecccccC
Q 003780 359 -LMKLEYLDLSHNKLN 373 (796)
Q Consensus 359 -~~~L~~L~l~~N~l~ 373 (796)
+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 899999999988775
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.7e-30 Score=286.89 Aligned_cols=227 Identities=23% Similarity=0.248 Sum_probs=127.3
Q ss_pred CCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcc
Q 003780 122 KLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLD 201 (796)
Q Consensus 122 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 201 (796)
++++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 34444444444444444444444444444444444444444444444444444444444444444444445555555555
Q ss_pred cccccCcchhhhcCCCCccccccCC-ccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccccccc
Q 003780 202 SNKLSGMLHQELGKLKNLVALNVGG-NKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGT 280 (796)
Q Consensus 202 ~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (796)
+|+++.+.+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 5555544444455555555555554 2333333335555666666666666665 333 255566666666666666666
Q ss_pred CccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeeccccc
Q 003780 281 IPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS 350 (796)
Q Consensus 281 ~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 350 (796)
.|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 6666666666666666666666666666666777777777777777666666677777777777777665
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.1e-30 Score=288.43 Aligned_cols=231 Identities=26% Similarity=0.235 Sum_probs=183.4
Q ss_pred CCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEc
Q 003780 121 SKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSL 200 (796)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 200 (796)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+.
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------------- 141 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSG------------- 141 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTT-------------
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChh-------------
Confidence 5677777777777777777777777777777777777766556666665555555555555544444
Q ss_pred ccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecc-ccccccCCccccCCcccceeecccccccc
Q 003780 201 DSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHS-NHLNGSIPPEIGNMTGILKVDMSMNNIEG 279 (796)
Q Consensus 201 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 279 (796)
.|.++++|++|+|++|++++..+..|.++++|++|+|++ |.+....+..|.++++|+.|+|++|++++
T Consensus 142 -----------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 142 -----------AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp -----------TSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred -----------hhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 444555555555555555555566788899999999999 45554445578999999999999999996
Q ss_pred cCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-c
Q 003780 280 TIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-G 358 (796)
Q Consensus 280 ~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~ 358 (796)
. | .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+ .
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 4 4 58899999999999999999999999999999999999999999999999999999999999999997777666 4
Q ss_pred ccccceEEecccccCCCCC
Q 003780 359 LMKLEYLDLSHNKLNGTIP 377 (796)
Q Consensus 359 ~~~L~~L~l~~N~l~~~~p 377 (796)
+++|+.|+|++|++.....
T Consensus 289 l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCEECSTT
T ss_pred ccCCCEEEccCCCcCCCCC
Confidence 8899999999999986543
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.7e-30 Score=287.75 Aligned_cols=245 Identities=23% Similarity=0.203 Sum_probs=222.0
Q ss_pred EEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCC
Q 003780 76 EINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGN 155 (796)
Q Consensus 76 ~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 155 (796)
.+++.+.+++..... -.++++.|+|++|++.+..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 47 ~v~c~~~~l~~iP~~----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 47 KVICVRKNLREVPDG----ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp EEECCSCCCSSCCSC----CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred EEEeCCCCcCcCCCC----CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 455555555533322 2378999999999999999999999999999999999999888889999999999999999
Q ss_pred CCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEccc-ccccCcchhhhcCCCCccccccCCccccccCC
Q 003780 156 NLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDS-NKLSGMLHQELGKLKNLVALNVGGNKLMGPIP 234 (796)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 234 (796)
+|++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++ |.+..+.+..|.++++|++|+|++|+++. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 99988788899999999999999999988888999999999999999 55666666789999999999999999994 45
Q ss_pred CcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccc
Q 003780 235 STLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLIS 314 (796)
Q Consensus 235 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 314 (796)
.+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 4889999999999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred cceecccccccc
Q 003780 315 LKGLDLSNNKLS 326 (796)
Q Consensus 315 L~~L~Ls~N~l~ 326 (796)
|+.|+|++|.+.
T Consensus 281 L~~L~L~~Np~~ 292 (440)
T 3zyj_A 281 LERIHLHHNPWN 292 (440)
T ss_dssp CCEEECCSSCEE
T ss_pred CCEEEcCCCCcc
Confidence 999999999986
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.4e-32 Score=288.07 Aligned_cols=203 Identities=19% Similarity=0.193 Sum_probs=95.8
Q ss_pred ccCccceeeccccccCCCCCccc--cCCCCccEEEcccccccCcchhhhcCC-----CCccccccCCccccccCCCcccc
Q 003780 167 QLTKLITMALSRNGLHGPIPSAI--GDLNNLLILSLDSNKLSGMLHQELGKL-----KNLVALNVGGNKLMGPIPSTLFR 239 (796)
Q Consensus 167 ~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~l~~ 239 (796)
++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..+.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 34444444444444444444433 4444444444444444444 3333333 44444444444444444444444
Q ss_pred cCccceEEecccccccc--CCccc--cCCcccceeecccccccc---cCccccccccccccccccCccccCccc-ccccc
Q 003780 240 LTNLTYLYLHSNHLNGS--IPPEI--GNMTGILKVDMSMNNIEG---TIPLELTRLSQLLYLSISSNMLSGQIP-ITIAG 311 (796)
Q Consensus 240 l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~---~~p~~l~~l~~L~~L~l~~N~l~~~~~-~~~~~ 311 (796)
+++|++|+|++|++.+. .|..+ ..+++|+.|+|++|++++ .....+.++++|++|+|++|.+++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 44444444444444332 11122 444555555555555542 111222344555555555555555443 33444
Q ss_pred ccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCC
Q 003780 312 LISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNG 374 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~ 374 (796)
+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |....+++|++|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 555555555555555 4444444 5555566666655544 433345556666666666553
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.2e-31 Score=285.32 Aligned_cols=248 Identities=21% Similarity=0.264 Sum_probs=161.7
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCC-CCCCCCCC-------CCCCCCEEEecCCCCCCCCchhh
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLT-GSIPPELG-------SLRNLEVLNLKGNNLNGAIPSSL 165 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 165 (796)
...++|+.|++++|.+ .+|..+... |++|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 4445667777777777 555555443 677777777763 34454444 56777777777777776666665
Q ss_pred --hccCccceeeccccccCCCCCccccCC-----CCccEEEcccccccCcchhhhcCCCCccccccCCcccccc--CCCc
Q 003780 166 --CQLTKLITMALSRNGLHGPIPSAIGDL-----NNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP--IPST 236 (796)
Q Consensus 166 --~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~ 236 (796)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|+++++|++|+|++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6677777777777777765 6666666 6777777777777777667777777777777777776543 2222
Q ss_pred c--cccCccceEEecccccccc--CC-ccccCCcccceeecccccccccCc-cccccccccccccccCccccCccccccc
Q 003780 237 L--FRLTNLTYLYLHSNHLNGS--IP-PEIGNMTGILKVDMSMNNIEGTIP-LELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 237 l--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
+ ..+++|++|+|++|++++. ++ ..+.++++|+.|+|++|++++..| ..+..+++|++|+|++|.++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 3 5667777777777777621 12 233456677777777777776554 34555677777777777776 5555554
Q ss_pred cccccceecccccccccCCCcccCCCCCCcEEEeecccccC
Q 003780 311 GLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSG 351 (796)
Q Consensus 311 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 351 (796)
++|++|+|++|++++. |. +..+++|+.|+|++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6777777777777654 44 6677777777777777664
No 311
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=7.8e-29 Score=257.91 Aligned_cols=218 Identities=26% Similarity=0.284 Sum_probs=168.5
Q ss_pred CCCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCC
Q 003780 58 SDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSI 137 (796)
Q Consensus 58 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 137 (796)
.++|.|.|+.|....+.+.+++++++++...... .++|++|+|++|++.+..+..|+++++|++|+|++|.|+...
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNI----PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCCSCC----CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccCCCC----CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 4789999999987777788999999888533221 257888888888888777778888888888888888888666
Q ss_pred CCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCC
Q 003780 138 PPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLK 217 (796)
Q Consensus 138 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 217 (796)
+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66678888888888888888877777778888888888888888877777778888888888888888777777777777
Q ss_pred CccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccc
Q 003780 218 NLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEG 279 (796)
Q Consensus 218 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 279 (796)
+|+.|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 77777777777776666667777777777777777775555556667777777777776654
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.2e-29 Score=289.82 Aligned_cols=284 Identities=24% Similarity=0.274 Sum_probs=227.1
Q ss_pred CCCCCccCCceeeC------C-CCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeec
Q 003780 56 NSSDHCKLDGVTCN------T-ARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDF 128 (796)
Q Consensus 56 ~~~~~C~w~gv~C~------~-~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (796)
.+.++|.|+|..|. + ...++.|++++++++ .++.. +. ++|++|+|++|.|++ +|. .+++|++|+|
T Consensus 17 ~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L 88 (622)
T 3g06_A 17 RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLTS-LPA---LPPELRTLEV 88 (622)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEc
Confidence 35678999875432 1 135889999999998 55542 22 899999999999985 454 5789999999
Q ss_pred ccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCc
Q 003780 129 SFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGM 208 (796)
Q Consensus 129 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 208 (796)
++|+|+ .+|. .+++|++|+|++|++++. |. .+++|+.|+|++|+|++ +|.. +++|++|+|++|+++++
T Consensus 89 s~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l 156 (622)
T 3g06_A 89 SGNQLT-SLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL 156 (622)
T ss_dssp CSCCCS-CCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC
T ss_pred CCCcCC-cCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc
Confidence 999998 4565 679999999999999964 44 67899999999999996 4543 48999999999999875
Q ss_pred chhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccc
Q 003780 209 LHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRL 288 (796)
Q Consensus 209 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 288 (796)
.. .+++|+.|++++|+|++ +| ..+++|+.|+|++|++++ +|.. +++|+.|++++|.++. +|.. +
T Consensus 157 ~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~ 220 (622)
T 3g06_A 157 PA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---P 220 (622)
T ss_dssp CC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---C
T ss_pred CC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---C
Confidence 32 45789999999999996 45 456889999999999995 5543 4789999999999994 4543 4
Q ss_pred cccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEe
Q 003780 289 SQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDL 367 (796)
Q Consensus 289 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l 367 (796)
++|++|+|++|.+++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+ .+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 789999999999996 55 456889999999999984 555 6789999999999999 667666 5889999999
Q ss_pred cccccCCCCCccccccc
Q 003780 368 SHNKLNGTIPPFLYHRF 384 (796)
Q Consensus 368 ~~N~l~~~~p~~~~~~~ 384 (796)
++|++++.+|..+..+.
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999988877665543
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=4.5e-31 Score=281.63 Aligned_cols=262 Identities=20% Similarity=0.189 Sum_probs=168.8
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
++.++++.+.+.......+..+++|++|+|++|.|++..|..|.++++|++|+|++|++++..| +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445555555554444455556666777777776666555666666777777777776665443 66666677777777
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|+|++|++++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 6666422 2366777777777776655443 4567777777777776666666667777777777777776555
Q ss_pred cccc-CCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCC
Q 003780 259 PEIG-NMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCS 337 (796)
Q Consensus 259 ~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 337 (796)
..+. .+++|+.|+|++|++++. | ....+++|++|+|++|.+++. |..+..+++|+.|+|++|+++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 5553 567777777777777654 2 223467777777777777743 334777777777777777777 3566677777
Q ss_pred CCcEEEeeccccc-CCCCccc-cccccceEEeccc-ccCC
Q 003780 338 ELRNITLRNNNLS-GSIPPEI-GLMKLEYLDLSHN-KLNG 374 (796)
Q Consensus 338 ~L~~L~L~~N~l~-~~~~~~~-~~~~L~~L~l~~N-~l~~ 374 (796)
+|+.|+|++|.++ +.+|..+ .+++|+.|++++| .++|
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 7888888877777 4444444 3566777777633 3443
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=9.3e-31 Score=279.19 Aligned_cols=270 Identities=19% Similarity=0.168 Sum_probs=228.3
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEe
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNL 152 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 152 (796)
+....+++.+.+...+.. .+..+++|++|+|++|.+.+..|..|..+++|++|+|++|.+++..+ |..+++|++|+|
T Consensus 11 ~l~i~~ls~~~l~~~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALAS-LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHH-HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHH-HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 345556677776544433 35677899999999999999888899999999999999999987655 999999999999
Q ss_pred cCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccccc
Q 003780 153 KGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP 232 (796)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 232 (796)
++|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..+..++.+++|++|++++|++++.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 999998543 3489999999999999766554 57899999999999999898999999999999999999987
Q ss_pred CCCccc-ccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccc
Q 003780 233 IPSTLF-RLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAG 311 (796)
Q Consensus 233 ~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 311 (796)
.+..+. .+++|++|+|++|++++. |. ...+++|+.|+|++|++++. |..+..+++|++|+|++|.++ .+|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhc
Confidence 777764 789999999999999965 32 34589999999999999965 445999999999999999999 57888999
Q ss_pred ccccceecccccccc-cCCCcccCCCCCCcEEEee-cccccCCCCccc
Q 003780 312 LISLKGLDLSNNKLS-GPIPPEIGKCSELRNITLR-NNNLSGSIPPEI 357 (796)
Q Consensus 312 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~ 357 (796)
+++|+.|++++|.+. +.+|..+..+++|+.|+++ .+.++|..|...
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~ 283 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC 283 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCC
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhcc
Confidence 999999999999998 7788899999999999999 455666655443
No 315
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=9.5e-30 Score=291.10 Aligned_cols=188 Identities=15% Similarity=0.080 Sum_probs=134.4
Q ss_pred eecccceeEEEEE-ccCCcEEEEEEeccccch-------hhHHHHHHHHHHHHHhhc-CCCceeeEEeEEEecceeeEEE
Q 003780 507 IGTGGYGSVYKAQ-LPNGKVVALKKLHRAETE-------ETTFFNSFQNEAHVLSKI-AHRNIVKLYGFCLHKKCMFLIY 577 (796)
Q Consensus 507 lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lV~ 577 (796)
.+.|++|.+..++ .-.|+.||||++...... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666653 335899999999765321 123356799999999999 6999999999999999999999
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCC
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSD 657 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 657 (796)
||++|++|.+++.+... ++.. +|+.||++||+|+|++ |||||||||+|||++.++.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999986543 5543 5899999999999999 9999999999999999999999999999987665
Q ss_pred CCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 003780 658 SSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPG 704 (796)
Q Consensus 658 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~ 704 (796)
.......+||++|+|||++.+ .+..++|+||+|++++++.++..|+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 555566789999999999876 4577899999999998887765553
No 316
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=8.2e-32 Score=303.42 Aligned_cols=322 Identities=21% Similarity=0.169 Sum_probs=196.8
Q ss_pred CeEEEeCCCCCcccc----ccccccCCCCCCcEEeccCCcccccCCcCc-cCCC----CCcEeecccCcCCC----CCCC
Q 003780 73 SIIEINLPEKKLKGE----LSQFNFSCFPGLESLSLRFNYLFGSIPSQV-GALS----KLRYLDFSFNNLTG----SIPP 139 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~----~L~~L~Ls~n~l~~----~~p~ 139 (796)
+++.|+++++++... ++ ..+..+++|++|+|++|.+.+..+..+ ..+. +|++|+|++|.|+. .++.
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDIS-SALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHH-HHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHH-HHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 456666666666532 11 135566777777777777665333222 2333 57777777777663 3466
Q ss_pred CCCCCCCCCEEEecCCCCCCCCchhhhc-----cCccceeeccccccCCCC----CccccCCCCccEEEcccccccCcch
Q 003780 140 ELGSLRNLEVLNLKGNNLNGAIPSSLCQ-----LTKLITMALSRNGLHGPI----PSAIGDLNNLLILSLDSNKLSGMLH 210 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~ 210 (796)
.|..+++|++|+|++|++++..+..+.. .++|++|+|++|++++.. +..+..+++|++|+|++|.++...+
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 187 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV 187 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH
Confidence 6677777777777777766544443332 346777777777776532 4455566777777777777665544
Q ss_pred hhhc-----CCCCccccccCCcccccc----CCCcccccCccceEEeccccccccC-----CccccCCcccceeeccccc
Q 003780 211 QELG-----KLKNLVALNVGGNKLMGP----IPSTLFRLTNLTYLYLHSNHLNGSI-----PPEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 211 ~~~~-----~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~ 276 (796)
..+. ..++|++|++++|.+++. ++..+..+++|++|+|++|++++.. +..+..+++|+.|+|++|+
T Consensus 188 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 188 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 4443 245777777777777653 3555666677777777777766432 2222346677777777777
Q ss_pred cccc----CccccccccccccccccCccccCccccccccc-----cccceecccccccccC----CCcccCCCCCCcEEE
Q 003780 277 IEGT----IPLELTRLSQLLYLSISSNMLSGQIPITIAGL-----ISLKGLDLSNNKLSGP----IPPEIGKCSELRNIT 343 (796)
Q Consensus 277 l~~~----~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~ 343 (796)
+++. ++..+..+++|++|++++|.+++..+..+... ++|++|+|++|.+++. ++..+..+++|+.|+
T Consensus 268 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 347 (461)
T 1z7x_W 268 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQ 347 (461)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEE
T ss_pred CCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEE
Confidence 7653 45566667777777777777765444444332 5777777777777654 344555667777777
Q ss_pred eecccccCCCCcccc------ccccceEEecccccCC----CCCcc---ccccccccccCCCCcc
Q 003780 344 LRNNNLSGSIPPEIG------LMKLEYLDLSHNKLNG----TIPPF---LYHRFPLDLSYNDLEG 395 (796)
Q Consensus 344 L~~N~l~~~~~~~~~------~~~L~~L~l~~N~l~~----~~p~~---~~~~~~l~l~~N~l~~ 395 (796)
|++|++++..+..+. .++|++|++++|++++ .+|.. ..++..|++++|.+++
T Consensus 348 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 348 ISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 777777654433332 4467777777777764 45543 3445567777777654
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-29 Score=286.07 Aligned_cols=233 Identities=21% Similarity=0.214 Sum_probs=140.9
Q ss_pred CCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcc
Q 003780 122 KLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLD 201 (796)
Q Consensus 122 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 201 (796)
+|++|+|++|.|++..|..|+++++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 55666666666655555555566666666666666554443 5555566666666665553221 2566666666
Q ss_pred cccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCcccc-CCcccceeeccccccccc
Q 003780 202 SNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIG-NMTGILKVDMSMNNIEGT 280 (796)
Q Consensus 202 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 280 (796)
+|.+++..+.. +++|+.|+|++|.+++..|..+.++++|++|+|++|.+++.+|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 66666554432 35566666666666666666666666666666666666665565554 566666666666666654
Q ss_pred CccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeeccccc-CCCCccc-c
Q 003780 281 IPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS-GSIPPEI-G 358 (796)
Q Consensus 281 ~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~-~ 358 (796)
.+ +..+++|++|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+ .
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 2346667777777777765333 36667777777777777774 5666777777777777777776 4444443 2
Q ss_pred ccccceEEec
Q 003780 359 LMKLEYLDLS 368 (796)
Q Consensus 359 ~~~L~~L~l~ 368 (796)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 4555555554
No 318
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=5e-31 Score=297.02 Aligned_cols=323 Identities=22% Similarity=0.180 Sum_probs=256.1
Q ss_pred CCeEEEeCCCCCccccccccccCCCC----CCcEEeccCCcccc----cCCcCccCCCCCcEeecccCcCCCCCCCCC--
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFP----GLESLSLRFNYLFG----SIPSQVGALSKLRYLDFSFNNLTGSIPPEL-- 141 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~----~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~-- 141 (796)
.+++.|+++++.+........+..++ +|++|+|++|.+.. .++..+..+++|++|+|++|.+++..+..+
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 56999999999987643332334455 79999999999984 568889999999999999999875433332
Q ss_pred ---CCCCCCCEEEecCCCCCCCC----chhhhccCccceeeccccccCCCCCcccc-----CCCCccEEEcccccccCc-
Q 003780 142 ---GSLRNLEVLNLKGNNLNGAI----PSSLCQLTKLITMALSRNGLHGPIPSAIG-----DLNNLLILSLDSNKLSGM- 208 (796)
Q Consensus 142 ---~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~- 208 (796)
..+++|++|+|++|++++.. +..+..+++|++|+|++|.++...+..+. ..++|++|+|++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 23678999999999999744 66777889999999999999865454443 366999999999999975
Q ss_pred ---chhhhcCCCCccccccCCccccccC-----CCcccccCccceEEecccccccc----CCccccCCcccceeeccccc
Q 003780 209 ---LHQELGKLKNLVALNVGGNKLMGPI-----PSTLFRLTNLTYLYLHSNHLNGS----IPPEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 209 ---~~~~~~~l~~L~~L~l~~N~l~~~~-----~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~ 276 (796)
++..+..+++|++|++++|++++.. +..+..+++|++|+|++|++++. ++..+..+++|+.|+|++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 5778889999999999999997542 22233588999999999999864 57777889999999999999
Q ss_pred ccccCccccccc-----cccccccccCccccCc----cccccccccccceecccccccccCCCcccCC-----CCCCcEE
Q 003780 277 IEGTIPLELTRL-----SQLLYLSISSNMLSGQ----IPITIAGLISLKGLDLSNNKLSGPIPPEIGK-----CSELRNI 342 (796)
Q Consensus 277 l~~~~p~~l~~l-----~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L 342 (796)
+++..+..+... ++|++|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 987666555543 6999999999999875 5667778899999999999998765555443 6899999
Q ss_pred EeecccccC----CCCccc-cccccceEEecccccCCC--------CCccccccccccccCCCCc
Q 003780 343 TLRNNNLSG----SIPPEI-GLMKLEYLDLSHNKLNGT--------IPPFLYHRFPLDLSYNDLE 394 (796)
Q Consensus 343 ~L~~N~l~~----~~~~~~-~~~~L~~L~l~~N~l~~~--------~p~~~~~~~~l~l~~N~l~ 394 (796)
+|++|++++ .+|..+ .+++|++|++++|++++. +|.....+..|++.++.+.
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 999999996 566655 478999999999999854 4443444555665555444
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.5e-29 Score=283.75 Aligned_cols=238 Identities=19% Similarity=0.176 Sum_probs=206.8
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
..+++|++|+|++|.+.+..|..|+.+++|++|+|++|.|++..| |+.+++|++|+|++|.|++..+ .++|+.
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 345589999999999999888899999999999999999987665 8999999999999999985433 389999
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCccc-ccCccceEEecccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLF-RLTNLTYLYLHSNH 252 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~-~l~~L~~L~L~~N~ 252 (796)
|+|++|.+++..+.. +++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 999999999776653 57899999999999999999999999999999999999988888876 78999999999999
Q ss_pred ccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccc-cCCCc
Q 003780 253 LNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLS-GPIPP 331 (796)
Q Consensus 253 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~ 331 (796)
+++..+ +..+++|+.|+|++|+|++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 997633 4468999999999999997555 58899999999999999995 7778899999999999999997 67788
Q ss_pred ccCCCCCCcEEEee
Q 003780 332 EIGKCSELRNITLR 345 (796)
Q Consensus 332 ~~~~l~~L~~L~L~ 345 (796)
.+..++.|+.|+++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 88888888888876
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.3e-27 Score=270.02 Aligned_cols=263 Identities=26% Similarity=0.339 Sum_probs=220.1
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
.+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35899999999999 6676665 89999999999999 5665 57999999999999995 555 7899999999
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|++++. |. .+++|+.|+|++|+++++.+ .+++|++|+|++|++++ +|. .+++|+.|++++|++++
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 99999975 44 56899999999999997543 35899999999999996 443 35789999999999995
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCC
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKC 336 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 336 (796)
+| ..+++|+.|+|++|+|++ +|.. +++|+.|++++|.++. +|.. +++|+.|+|++|++++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 66 457899999999999996 4443 4789999999999994 4433 4789999999999996 55 566
Q ss_pred CCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcccc---ccccccccCCCCcccCCCCCC
Q 003780 337 SELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPFLY---HRFPLDLSYNDLEGEIPDYFR 402 (796)
Q Consensus 337 ~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~---~~~~l~l~~N~l~~~~p~~~~ 402 (796)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+. ++..|+|++|.+++.+|+.+.
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM--LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc--ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 899999999999994 555 6789999999999999 7887654 455799999999998887543
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6.2e-27 Score=244.47 Aligned_cols=206 Identities=24% Similarity=0.231 Sum_probs=108.5
Q ss_pred CCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccC
Q 003780 146 NLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVG 225 (796)
Q Consensus 146 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 225 (796)
+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444443333344444444444444444443334444444445555555555544444445555555555555
Q ss_pred CccccccCCCcccccCccceEEecccccccc-CCccccCCcccceeecccccccccCccccccccccc----cccccCcc
Q 003780 226 GNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS-IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLL----YLSISSNM 300 (796)
Q Consensus 226 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~l~~N~ 300 (796)
+|++++..+..+..+++|++|+|++|++++. +|..+.++++|+.|+|++|++++..+..+..+++|+ +|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 5555544444555566666666666666542 455666666666666666666665555666666655 55566666
Q ss_pred ccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCC
Q 003780 301 LSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGS 352 (796)
Q Consensus 301 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 352 (796)
+++..+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|.+++.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 65444333332 3566666666666655444555566555555555555543
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=4.4e-27 Score=245.60 Aligned_cols=206 Identities=21% Similarity=0.213 Sum_probs=161.0
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998887778888999999999999888777778888899999999999988877788888888888888
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCc-chhhhcCCCCccccccCCccccccCCCcccccCccc----eEEeccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGM-LHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLT----YLYLHSN 251 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~L~L~~N 251 (796)
++|.+++..+..+.++++|++|+|++|++++. +|..+.++++|++|++++|++++..+..+..+++|+ +|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 88888877777788888888888888888775 477888888888888888888877667777766666 6777777
Q ss_pred cccccCCccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 252 HLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 252 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
++++..+..+. ..+|+.|+|++|++++..+..|.++++|++|+|++|++.+
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 77754444333 3367777777777776555556666666666666666664
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=2.9e-27 Score=246.24 Aligned_cols=227 Identities=24% Similarity=0.262 Sum_probs=152.3
Q ss_pred CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecc
Q 003780 98 GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALS 177 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (796)
.+..+++..+.+.+.. ....+++|++|++++|.++. + +.+..+++|++|+|++|++++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 3444555555554432 34556677777777777663 2 2466677777777777777653 356667777777777
Q ss_pred ccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccC
Q 003780 178 RNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSI 257 (796)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 257 (796)
+|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..+..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 77777666666677777777777777777666666777777777777777777666666667777777777777777666
Q ss_pred CccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCC
Q 003780 258 PPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCS 337 (796)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 337 (796)
+..+..+++|+.|+|++|++++..|..+..+++|++|++++|.+.+. +++|+.|+++.|.++|.+|.+++.++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 66666777777777777777766666667777777777777766643 33567777777777777777666544
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=2.4e-26 Score=239.26 Aligned_cols=212 Identities=24% Similarity=0.253 Sum_probs=173.2
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
+..+++|+.|++++|.+... ..++.+++|++|+|++|.+++. +.+.++++|++|+|++|++++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 45567788888888887643 3477888888888888888853 3678888888888888888877777788888888
Q ss_pred eeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNH 252 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 252 (796)
+|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|++++..+..+..+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 88888888888777778888888888888888888888888888888888888888887777777888888888888888
Q ss_pred ccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCcccccccccccc
Q 003780 253 LNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISL 315 (796)
Q Consensus 253 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 315 (796)
+++..|..+..+++|+.|+|++|.+.+. +++|++|++..|.++|.+|..++.+...
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 8887777788888888888888888754 4578888888888888888887776543
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.6e-25 Score=232.88 Aligned_cols=204 Identities=23% Similarity=0.261 Sum_probs=155.7
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
..++.+++++++++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 456788888888874 455443 57888888888888776778888888888888888888666666778888888888
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 88888877777778888888888888888877777777888888888888888766666677777788888877777766
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
.+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 66667777777777777777776655566667777777777776653
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.93 E-value=3e-26 Score=243.46 Aligned_cols=223 Identities=20% Similarity=0.231 Sum_probs=140.6
Q ss_pred CCcEEeccCCcccccCCc---CccCCCCCcEeecccCcCCCCCCCCC--CCCCCCCEEEecCCCCCCCCc----hhhhcc
Q 003780 98 GLESLSLRFNYLFGSIPS---QVGALSKLRYLDFSFNNLTGSIPPEL--GSLRNLEVLNLKGNNLNGAIP----SSLCQL 168 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 168 (796)
.++.|.+.++.+....-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777766431100 12234568888888888888888777 778888888888888886554 344567
Q ss_pred CccceeeccccccCCCCCccccCCCCccEEEcccccccCc--c--hhhhcCCCCccccccCCccccccCCC----ccccc
Q 003780 169 TKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGM--L--HQELGKLKNLVALNVGGNKLMGPIPS----TLFRL 240 (796)
Q Consensus 169 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~~~----~l~~l 240 (796)
++|++|+|++|++++..|..|+.+++|++|+|++|++.+. . +..++.+++|++|+|++|+++.. +. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcC
Confidence 7888888888888777777788888888888888876642 1 12235677777777777777522 22 23556
Q ss_pred CccceEEeccccccccCCccccCC---cccceeecccccccccCccccccccccccccccCccccCccccccccccccce
Q 003780 241 TNLTYLYLHSNHLNGSIPPEIGNM---TGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKG 317 (796)
Q Consensus 241 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 317 (796)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--------------------------~~L~~ 276 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--------------------------AKLRV 276 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--------------------------SCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--------------------------CCCCE
Confidence 677777777777766656555544 35555555555555 3343332 34555
Q ss_pred ecccccccccCCCcccCCCCCCcEEEeeccccc
Q 003780 318 LDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS 350 (796)
Q Consensus 318 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 350 (796)
|+|++|++++. |. +..+++|+.|+|++|+++
T Consensus 277 L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 277 LDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp EECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred EECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 55555555532 22 445555666666666554
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=2.1e-25 Score=229.33 Aligned_cols=191 Identities=25% Similarity=0.298 Sum_probs=117.6
Q ss_pred CCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCC
Q 003780 59 DHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIP 138 (796)
Q Consensus 59 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p 138 (796)
+||.|.|++|... ...+++++++++...... .++|+.|+|++|.+.+..+..|+++++|++|+|++|.|++..+
T Consensus 3 ~Cp~~~gC~C~~~--~~~l~~~~~~l~~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG--KKEVDCQGKSLDSVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG--GTEEECTTCCCSSCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC--CeEEecCCCCccccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5789999999632 345777777776433221 1466666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCC
Q 003780 139 PELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKN 218 (796)
Q Consensus 139 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 218 (796)
..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.+..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 66666666666666666666555556666666666666666666555555566666666666666665555555555555
Q ss_pred ccccccCCccccccCCCcccccCccceEEeccccccc
Q 003780 219 LVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNG 255 (796)
Q Consensus 219 L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (796)
|+.|+|++|++++..+..+..+++|++|+|++|.+++
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5555555555555444455555555555555555543
No 328
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=1.6e-27 Score=259.06 Aligned_cols=254 Identities=19% Similarity=0.215 Sum_probs=165.8
Q ss_pred EEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCC----CCCCCCC-CCCEEEecCCCCCCCCchhhhcc-----Cc
Q 003780 101 SLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIP----PELGSLR-NLEVLNLKGNNLNGAIPSSLCQL-----TK 170 (796)
Q Consensus 101 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 170 (796)
.++|++|+++|.+|..+...++|++|||++|.|++..+ ..|.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677777777777666666667777777777776555 5666677 77777777777777667666665 77
Q ss_pred cceeeccccccCCCCCccccC----C-CCccEEEcccccccCcchhhhcC-----CCCccccccCCccccccCC----Cc
Q 003780 171 LITMALSRNGLHGPIPSAIGD----L-NNLLILSLDSNKLSGMLHQELGK-----LKNLVALNVGGNKLMGPIP----ST 236 (796)
Q Consensus 171 L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~~----~~ 236 (796)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+.. .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777777666654433 3 67777777777777666654433 2577777777777774332 23
Q ss_pred ccccC-ccceEEeccccccccCCcccc----CC-cccceeeccccccccc----Ccccccc-ccccccccccCccccCcc
Q 003780 237 LFRLT-NLTYLYLHSNHLNGSIPPEIG----NM-TGILKVDMSMNNIEGT----IPLELTR-LSQLLYLSISSNMLSGQI 305 (796)
Q Consensus 237 l~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~l~~-l~~L~~L~l~~N~l~~~~ 305 (796)
+..++ +|++|+|++|++++..+..+. .. ++|+.|+|++|++++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 777777777777765554333 33 4777777777777753 3444444 347777777777777644
Q ss_pred c----cccccccccceecccccccccCC-------CcccCCCCCCcEEEeecccccCCCC
Q 003780 306 P----ITIAGLISLKGLDLSNNKLSGPI-------PPEIGKCSELRNITLRNNNLSGSIP 354 (796)
Q Consensus 306 ~----~~~~~l~~L~~L~Ls~N~l~~~~-------~~~~~~l~~L~~L~L~~N~l~~~~~ 354 (796)
+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.|++++|++.+..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 33455677777777777744332 2355667777777777777765533
No 329
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=2.6e-27 Score=254.84 Aligned_cols=265 Identities=18% Similarity=0.200 Sum_probs=169.5
Q ss_pred CccCCceeeCCCCCeEEEeCCCCCccccccccccCCC--CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCC-
Q 003780 60 HCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCF--PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGS- 136 (796)
Q Consensus 60 ~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~- 136 (796)
|.+|.++.|+. ..++.++++++++.. ..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~-~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE-SLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS-TTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc-hhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 44699998873 347778888776652 234445 6777788887777766554 45677777777777777654
Q ss_pred CCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc-ccCCC-CCccccCCCCccEEEcccc-cccCc-chhh
Q 003780 137 IPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN-GLHGP-IPSAIGDLNNLLILSLDSN-KLSGM-LHQE 212 (796)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~ 212 (796)
+|..+..+++|++|+|++|++++..|..+..+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 6666777777777777777777667777777777777777777 56542 4555667777777777777 77654 4566
Q ss_pred hcCCC-CccccccCCc--ccc-ccCCCcccccCccceEEecccc-ccccCCccccCCcccceeeccccc-ccccCccccc
Q 003780 213 LGKLK-NLVALNVGGN--KLM-GPIPSTLFRLTNLTYLYLHSNH-LNGSIPPEIGNMTGILKVDMSMNN-IEGTIPLELT 286 (796)
Q Consensus 213 ~~~l~-~L~~L~l~~N--~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~ 286 (796)
+..++ +|++|++++| .++ +.+|..+..+++|++|+|++|. +++..+..+..+++|+.|++++|. ++......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 66777 7777777777 343 3345555666777777777776 555555666666667777776664 2222222455
Q ss_pred cccccccccccCccccCccccccccc-cccceecccccccccCCCcccC
Q 003780 287 RLSQLLYLSISSNMLSGQIPITIAGL-ISLKGLDLSNNKLSGPIPPEIG 334 (796)
Q Consensus 287 ~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~ 334 (796)
++++|++|++++| ++ ...+..+ .+|..|++++|++++..|..++
T Consensus 270 ~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 270 EIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred cCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 6666666666666 22 1123333 2355555566666655555544
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.7e-25 Score=231.41 Aligned_cols=203 Identities=23% Similarity=0.195 Sum_probs=96.3
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
++++++++.+++++|+++. +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 3344445555555555442 222221 3455555555555544444455555555555555555432211 4444555
Q ss_pred eeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNH 252 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 252 (796)
+|+|++|+++ .+|..+..+++|++|+|++|+++++.+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 5555555554 334444445555555555555554444445555555555555555554444444445555555555555
Q ss_pred ccccCCccccCCcccceeecccccccccCccccccccccccccccCcccc
Q 003780 253 LNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLS 302 (796)
Q Consensus 253 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 302 (796)
+++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 55333333444455555555555554 33444444444455555554443
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=6e-25 Score=230.60 Aligned_cols=203 Identities=26% Similarity=0.254 Sum_probs=100.9
Q ss_pred ccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCcc
Q 003780 117 VGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLL 196 (796)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 196 (796)
++++++|+++++++|+++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455666666666666666 3444443 4566666666666655555555555555555555555532221 3344444
Q ss_pred EEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccc
Q 003780 197 ILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNN 276 (796)
Q Consensus 197 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 276 (796)
+|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 81 TLDLSHNQLQ-------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECCSSCCS-------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 4444444433 233334444444555555555444333444444444444444444
Q ss_pred ccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeeccccc
Q 003780 277 IEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLS 350 (796)
Q Consensus 277 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 350 (796)
+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 44444444444444444444444444333334444455555555555554 34444444445555555555444
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=4.2e-25 Score=225.26 Aligned_cols=197 Identities=19% Similarity=0.206 Sum_probs=144.0
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCc-CCCCCCCCCCCCCCCCEEEecC-CCCCCCCchhhhccCcccee
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN-LTGSIPPELGSLRNLEVLNLKG-NNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 174 (796)
++|++|+|++|+++++.+..|+++++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478888888888888877788888888888888886 8766666888888888888888 88887767788888888888
Q ss_pred eccccccCCCCCccccCCCCcc---EEEcccc-cccCcchhhhcCCCCcc-ccccCCccccccCCCcccccCccceEEec
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLL---ILSLDSN-KLSGMLHQELGKLKNLV-ALNVGGNKLMGPIPSTLFRLTNLTYLYLH 249 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~l~~l~~L~~L~L~ 249 (796)
++++|++++ +|. |..+++|+ +|++++| +++++.+..|.++++|+ .|++++|+++...+..+.. ++|++|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888886 454 77777777 8888888 77777777777777777 7777777777433333333 677777777
Q ss_pred ccc-ccccCCccccCC-cccceeecccccccccCccccccccccccccccCc
Q 003780 250 SNH-LNGSIPPEIGNM-TGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSN 299 (796)
Q Consensus 250 ~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 299 (796)
+|+ +++..+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 774 765555666666 6677777777766643322 3445555555544
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.1e-25 Score=255.99 Aligned_cols=187 Identities=14% Similarity=0.179 Sum_probs=148.0
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchh-----hHHHHHHHHHHHHHhhcCCCceeeEEeEEEecceeeEE
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEE-----TTFFNSFQNEAHVLSKIAHRNIVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lV 576 (796)
...+.||+|+||.||+|.. .++.+++|+........ ....+.+.+|++++++++||||+++..++..++..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999955 47889999875533221 11245689999999999999999777777778888999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCC
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDS 656 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 656 (796)
|||+++++|.+++.+ +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 457999999999999999 9999999999999999 999999999998754
Q ss_pred CCCC-------ccccccccCccCcccccc--CCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 657 DSSN-------RTIVAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 657 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
.... .....||+.|+|||++.. ..|+..+|+||..+-..+.+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3211 134579999999999987 567788999999999999888877753
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.1e-24 Score=222.24 Aligned_cols=131 Identities=19% Similarity=0.168 Sum_probs=73.7
Q ss_pred CCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCC-CCCCCchhhhccCccceeeccc-cccCCCCCccccCCCCccEEE
Q 003780 122 KLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNN-LNGAIPSSLCQLTKLITMALSR-NGLHGPIPSAIGDLNNLLILS 199 (796)
Q Consensus 122 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 199 (796)
+|++|+|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776555567777777777777775 6655555666666666666666 666655555666666666666
Q ss_pred cccccccCcchhhhcCCCCcc---ccccCCc-cccccCCCcccccCccc-eEEecccccc
Q 003780 200 LDSNKLSGMLHQELGKLKNLV---ALNVGGN-KLMGPIPSTLFRLTNLT-YLYLHSNHLN 254 (796)
Q Consensus 200 L~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~~l~~l~~L~-~L~L~~N~l~ 254 (796)
|++|+++++ |. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++
T Consensus 112 l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 666665542 22 44444443 4444444 44433333344444444 4444444443
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2.1e-26 Score=250.32 Aligned_cols=253 Identities=18% Similarity=0.207 Sum_probs=201.9
Q ss_pred EeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCc----hhhhccC-ccceeeccccccCCCCCccccCC-----CC
Q 003780 125 YLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIP----SSLCQLT-KLITMALSRNGLHGPIPSAIGDL-----NN 194 (796)
Q Consensus 125 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 194 (796)
+++|++|++++.+|..+...++|++|+|++|++++..+ ..|.+++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999888877777789999999999998777 7788888 89999999999998888888776 99
Q ss_pred ccEEEcccccccCcchhhhcC----C-CCccccccCCccccccCCCcccc-----cCccceEEeccccccccCCc----c
Q 003780 195 LLILSLDSNKLSGMLHQELGK----L-KNLVALNVGGNKLMGPIPSTLFR-----LTNLTYLYLHSNHLNGSIPP----E 260 (796)
Q Consensus 195 L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~l~~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~p~----~ 260 (796)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+.. .++|++|+|++|++++..+. .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999887775544 3 89999999999998766655443 25899999999999864433 3
Q ss_pred ccCCc-ccceeecccccccccCccccccc-----cccccccccCccccCc----ccccccc-ccccceecccccccccCC
Q 003780 261 IGNMT-GILKVDMSMNNIEGTIPLELTRL-----SQLLYLSISSNMLSGQ----IPITIAG-LISLKGLDLSNNKLSGPI 329 (796)
Q Consensus 261 ~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~l~~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~~~ 329 (796)
+..++ +|+.|+|++|++++..+..+... ++|++|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 44555 89999999999998777655544 6999999999999863 4455555 358999999999998755
Q ss_pred C----cccCCCCCCcEEEeecccccCCCCc-------cc-cccccceEEecccccCCCCC
Q 003780 330 P----PEIGKCSELRNITLRNNNLSGSIPP-------EI-GLMKLEYLDLSHNKLNGTIP 377 (796)
Q Consensus 330 ~----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~-~~~~L~~L~l~~N~l~~~~p 377 (796)
+ ..+..+++|+.|+|++|.+.+..+. .+ .+.+|+.||+++|++.+..|
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 3456788999999999986654332 12 35678888899998876544
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=5.8e-27 Score=257.22 Aligned_cols=190 Identities=19% Similarity=0.250 Sum_probs=98.5
Q ss_pred CCcCccCCCCCcEeecccCcCCCC----CCCCCCCCCCCCEEEecCCC---CCCCCchhh-------hccCccceeeccc
Q 003780 113 IPSQVGALSKLRYLDFSFNNLTGS----IPPELGSLRNLEVLNLKGNN---LNGAIPSSL-------CQLTKLITMALSR 178 (796)
Q Consensus 113 ~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~-------~~l~~L~~L~L~~ 178 (796)
++..+..+++|++|+|++|.|++. ++..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 445566666677777777766644 22335566777777777643 334445444 4556666666666
Q ss_pred cccCC----CCCccccCCCCccEEEcccccccCcchhhhcC----C---------CCccccccCCcccc-ccCC---Ccc
Q 003780 179 NGLHG----PIPSAIGDLNNLLILSLDSNKLSGMLHQELGK----L---------KNLVALNVGGNKLM-GPIP---STL 237 (796)
Q Consensus 179 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~l~~N~l~-~~~~---~~l 237 (796)
|.+++ .+|..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66664 24555566666666666666665433332222 2 55555555555554 2222 233
Q ss_pred cccCccceEEeccccccc-----cCCccccCCcccceeeccccccc----ccCccccccccccccccccCcccc
Q 003780 238 FRLTNLTYLYLHSNHLNG-----SIPPEIGNMTGILKVDMSMNNIE----GTIPLELTRLSQLLYLSISSNMLS 302 (796)
Q Consensus 238 ~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~l~~l~~L~~L~l~~N~l~ 302 (796)
..+++|++|+|++|+++. .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.++
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCc
Confidence 444555555555555541 22224444445555555555543 334444444444444444444444
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=231.18 Aligned_cols=204 Identities=16% Similarity=0.147 Sum_probs=175.4
Q ss_pred CCCCCcEEeccCCcccccCCcCc--cCCCCCcEeecccCcCCCCCC----CCCCCCCCCCEEEecCCCCCCCCchhhhcc
Q 003780 95 CFPGLESLSLRFNYLFGSIPSQV--GALSKLRYLDFSFNNLTGSIP----PELGSLRNLEVLNLKGNNLNGAIPSSLCQL 168 (796)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 168 (796)
.+++|++|+|++|.+.+..|..+ +.+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|..+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34679999999999999999988 999999999999999997665 345679999999999999999989999999
Q ss_pred CccceeeccccccCCC---C-CccccCCCCccEEEcccccccCcchh---hhcCCCCccccccCCccccccCCCccccc-
Q 003780 169 TKLITMALSRNGLHGP---I-PSAIGDLNNLLILSLDSNKLSGMLHQ---ELGKLKNLVALNVGGNKLMGPIPSTLFRL- 240 (796)
Q Consensus 169 ~~L~~L~L~~N~l~~~---~-p~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~l~~l- 240 (796)
++|++|+|++|++.+. . +..+..+++|++|+|++|+++...+. .++++++|++|+|++|++++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 9999999999998752 2 23457899999999999999754332 46789999999999999998888888777
Q ss_pred --CccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 241 --TNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 241 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6787775 7999999999999964 33 6777888888888888764
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=3.1e-26 Score=246.49 Aligned_cols=255 Identities=18% Similarity=0.213 Sum_probs=163.1
Q ss_pred CCcEEeccCCcccccCCcCccCC--CCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCC-CchhhhccCcccee
Q 003780 98 GLESLSLRFNYLFGSIPSQVGAL--SKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGA-IPSSLCQLTKLITM 174 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 174 (796)
.++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678888888776 4556666 7888888888888866555 55678888888888887755 67777777888888
Q ss_pred eccccccCCCCCccccCCCCccEEEcccc-cccCc-chhhhcCCCCccccccCCc-ccccc-CCCcccccC-ccceEEec
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDSN-KLSGM-LHQELGKLKNLVALNVGGN-KLMGP-IPSTLFRLT-NLTYLYLH 249 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~-~~~~l~~l~-~L~~L~L~ 249 (796)
+|++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888777666777777777777777777 56542 4555666666666666666 66543 344455555 66666666
Q ss_pred cccccccCCccccCCcccceeeccccccc-ccCccccccccccccccccCcc-ccCccccccccccccceecccccc-cc
Q 003780 250 SNHLNGSIPPEIGNMTGILKVDMSMNNIE-GTIPLELTRLSQLLYLSISSNM-LSGQIPITIAGLISLKGLDLSNNK-LS 326 (796)
Q Consensus 250 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~ 326 (796)
+|.+ .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.
T Consensus 204 ~~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 204 GYRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp SCGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred CCcc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 5521 222 2334444455555555555555 444455555556666666666663 22
Q ss_pred cCCCcccCCCCCCcEEEeecccccCCCCccc-cc-cccceEEecccccCCCCCccccc
Q 003780 327 GPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GL-MKLEYLDLSHNKLNGTIPPFLYH 382 (796)
Q Consensus 327 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~-~~L~~L~l~~N~l~~~~p~~~~~ 382 (796)
......++++++|+.|+|++| ++. ..+ .+ ..|+.|++++|++++..|+.+.+
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 111224666777777777777 221 112 22 34777778888888888776654
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=2.8e-26 Score=251.81 Aligned_cols=235 Identities=17% Similarity=0.199 Sum_probs=182.3
Q ss_pred cCCCCCCcEEeccCCccccc----CCcCccCCCCCcEeecccCc---CCCCCCCCC-------CCCCCCCEEEecCCCCC
Q 003780 93 FSCFPGLESLSLRFNYLFGS----IPSQVGALSKLRYLDFSFNN---LTGSIPPEL-------GSLRNLEVLNLKGNNLN 158 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~---l~~~~p~~~-------~~l~~L~~L~L~~N~l~ 158 (796)
+..+++|++|+|++|.+.+. ++..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|+++
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 107 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 107 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCC
Confidence 56778999999999999876 34457789999999999964 445556554 68899999999999999
Q ss_pred C----CCchhhhccCccceeeccccccCCCCCcccc----CC---------CCccEEEccccccc-Ccch---hhhcCCC
Q 003780 159 G----AIPSSLCQLTKLITMALSRNGLHGPIPSAIG----DL---------NNLLILSLDSNKLS-GMLH---QELGKLK 217 (796)
Q Consensus 159 ~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~ 217 (796)
+ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ ...+ ..+..++
T Consensus 108 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 187 (386)
T 2ca6_A 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 187 (386)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC
Confidence 7 4788899999999999999999754444443 34 89999999999998 3444 5778899
Q ss_pred CccccccCCcccc--c---cCCCcccccCccceEEecccccc----ccCCccccCCcccceeeccccccccc----Cccc
Q 003780 218 NLVALNVGGNKLM--G---PIPSTLFRLTNLTYLYLHSNHLN----GSIPPEIGNMTGILKVDMSMNNIEGT----IPLE 284 (796)
Q Consensus 218 ~L~~L~l~~N~l~--~---~~~~~l~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 284 (796)
+|++|+|++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|..
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 267 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHH
Confidence 9999999999998 3 45557889999999999999996 56788899999999999999999875 4555
Q ss_pred ccc--ccccccccccCccccC----cccccc-ccccccceeccccccccc
Q 003780 285 LTR--LSQLLYLSISSNMLSG----QIPITI-AGLISLKGLDLSNNKLSG 327 (796)
Q Consensus 285 l~~--l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~ 327 (796)
+.. +++|++|+|++|.+++ .+|..+ .++++|++|+|++|.+++
T Consensus 268 l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 532 6777777777777665 244444 334455555555554443
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=5.2e-24 Score=225.68 Aligned_cols=194 Identities=25% Similarity=0.394 Sum_probs=131.4
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
..+++|++|++++|.+... | .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 3456677777777777643 3 46777777777777777775433 77777777777777777753 25677777777
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
|+|++|++++. + .+..+++|++|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 77777777753 2 26777777777777777776544 6677777777777777765433 66677777777777777
Q ss_pred cccCCccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 254 NGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
++..+ +..+++|+.|+|++|++++..+ +..+++|++|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 64332 6667777777777777775443 6667777777777777764
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.1e-23 Score=209.89 Aligned_cols=183 Identities=22% Similarity=0.213 Sum_probs=119.5
Q ss_pred CccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCC
Q 003780 60 HCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPP 139 (796)
Q Consensus 60 ~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 139 (796)
.|.|++|.|+..+ ++. ++ ....++|++|+|++|++.+..+..|+.+++|++|+|++|++++..+.
T Consensus 6 ~C~~~~v~c~~~~-----------l~~-~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG-----------RTS-VP---TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC-----------CSS-CC---SCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC-----------ccC-CC---CCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 4789999997533 111 11 22235677778877777776666677777777777777777766566
Q ss_pred CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCc
Q 003780 140 ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNL 219 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 219 (796)
.|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..+..+++|
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 67777777777777777776656666777777777777777776666666666677777777666666655556666666
Q ss_pred cccccCCccccccCCCcccccCccceEEeccccccccCCccccCC
Q 003780 220 VALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNM 264 (796)
Q Consensus 220 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 264 (796)
+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.+
T Consensus 151 ~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 151 QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred cEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 666666665543 23345555555555555555554443
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.2e-23 Score=214.20 Aligned_cols=180 Identities=23% Similarity=0.252 Sum_probs=128.5
Q ss_pred CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecc
Q 003780 98 GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALS 177 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (796)
..+.++++++.+.. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 45677777777773 444443 577788888888877777777777888888888888777777777777777777777
Q ss_pred ccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccC
Q 003780 178 RNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSI 257 (796)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 257 (796)
+|++++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 77777766677777777777777777777766666677777777777777777665556666777777777777776655
Q ss_pred CccccCCcccceeeccccccccc
Q 003780 258 PPEIGNMTGILKVDMSMNNIEGT 280 (796)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~ 280 (796)
+..+..+++|+.|+|++|.+++.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 55666666666666666666643
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=6.3e-24 Score=225.04 Aligned_cols=207 Identities=27% Similarity=0.370 Sum_probs=131.6
Q ss_pred EeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccccc
Q 003780 102 LSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGL 181 (796)
Q Consensus 102 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 181 (796)
+.+..+.+.+.+ .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 344555555432 24567788888888888874 44 57888888888888888886544 78888888888888888
Q ss_pred CCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccc
Q 003780 182 HGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEI 261 (796)
Q Consensus 182 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 261 (796)
++. ..+..+++|++|+|++|++++..+ +..+++|++|++++|++++..+ +..+++|++|+|++|++++. +. +
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l 169 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-L 169 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-G
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-h
Confidence 753 357777888888888887776532 6777777777777777765433 66666677777777766643 22 5
Q ss_pred cCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccc
Q 003780 262 GNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLS 326 (796)
Q Consensus 262 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 326 (796)
..+++|+.|+|++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|+|++|.++
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 566666666666666654332 4444555555555554443321 334444444444444443
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.8e-23 Score=225.95 Aligned_cols=222 Identities=19% Similarity=0.171 Sum_probs=147.8
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCC-CCCCCCCCCCE-EEecCCCCCCCCchhhhccCcccee
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIP-PELGSLRNLEV-LNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
+++++|+|++|+|+.+.+.+|.++++|++|+|++|.+.+.+| ..|.++++|++ +.+++|+|+...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578888888888887777788888888888888888766554 46788887765 5666788887777888888888888
Q ss_pred eccccccCCCCCccccCCCCccEEEccc-ccccCcchhhhcCCC-CccccccCCccccccCCCcccccCccceEEecc-c
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDS-NKLSGMLHQELGKLK-NLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHS-N 251 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~-N 251 (796)
++++|++++..+..+....++..|++.+ |++..+.+..|..+. .|+.|+|++|+|+.+.+ .....++|++|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~-~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHN-SAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECT-TSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCCh-hhccccchhHHhhccCC
Confidence 8888888877777777777777888755 566666666666654 46677777777764333 333455677777764 4
Q ss_pred cccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceeccccc
Q 003780 252 HLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNN 323 (796)
Q Consensus 252 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 323 (796)
.++...++.|.++++|+.|||++|+|+...+..|.++++|+.+++. .++ .+| .+..+++|+.++++++
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCC
Confidence 4553333456667777777777777765544445555544444432 222 333 2455555555555544
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=2.8e-23 Score=224.43 Aligned_cols=223 Identities=19% Similarity=0.179 Sum_probs=185.7
Q ss_pred CCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCc-hhhhccCccce-eeccccccCCCCCccccCCCCccEE
Q 003780 121 SKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIP-SSLCQLTKLIT-MALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++.|+++...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 589999999999996666789999999999999999977665 57889988775 6777899999999999999999999
Q ss_pred EcccccccCcchhhhcCCCCccccccCC-ccccccCCCcccccC-ccceEEeccccccccCCccccCCcccceeeccc-c
Q 003780 199 SLDSNKLSGMLHQELGKLKNLVALNVGG-NKLMGPIPSTLFRLT-NLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSM-N 275 (796)
Q Consensus 199 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N 275 (796)
++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+ .+|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCC
Confidence 9999999998888888888899999965 678776677777765 6899999999999 4565566678999999985 6
Q ss_pred cccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeeccc
Q 003780 276 NIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNN 348 (796)
Q Consensus 276 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 348 (796)
.++...+..|.++++|++|+|++|+|+...+..+.++++|+.+++. .+. .+| .+.++++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCCc
Confidence 7776656689999999999999999997666667776666666553 343 556 48899999999998764
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=3.7e-23 Score=235.09 Aligned_cols=203 Identities=24% Similarity=0.327 Sum_probs=136.3
Q ss_pred CCCCc-----cCCce-eeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeeccc
Q 003780 57 SSDHC-----KLDGV-TCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSF 130 (796)
Q Consensus 57 ~~~~C-----~w~gv-~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 130 (796)
+.++| .|.|+ .|.. ++++.|+|+++++++ ++.. + +++|++|+|++|+|+ .+| +.+++|++|+|++
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~ 109 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEYLDACD 109 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCS
T ss_pred cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccC
Confidence 45667 79999 7864 468888888888876 4432 2 367888888888877 445 4467788888888
Q ss_pred CcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcch
Q 003780 131 NNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLH 210 (796)
Q Consensus 131 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 210 (796)
|.|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|+++ |
T Consensus 110 N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~l-p 176 (571)
T 3cvr_A 110 NRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFL-P 176 (571)
T ss_dssp SCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-C
T ss_pred CCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCc-c
Confidence 88875 565 554 78888888888776 454 56777777777777775 444 456777777777777763 3
Q ss_pred hhhcCCCCccccccCCccccccCCCcccccCcc-------ceEEeccccccccCCccccCCcccceeecccccccccCcc
Q 003780 211 QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNL-------TYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPL 283 (796)
Q Consensus 211 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 283 (796)
. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|.
T Consensus 177 ~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 177 E-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 3 44 67777777777776 4444 433 55 66677777666 4566666666666666666666666666
Q ss_pred cccccc
Q 003780 284 ELTRLS 289 (796)
Q Consensus 284 ~l~~l~ 289 (796)
.|..++
T Consensus 249 ~l~~l~ 254 (571)
T 3cvr_A 249 SLSQQT 254 (571)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 655543
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.4e-22 Score=199.05 Aligned_cols=180 Identities=24% Similarity=0.303 Sum_probs=126.4
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.++++++.+... |..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 3466667776643 3333 357888888888888766667788888888888888888666666777888888888888
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPP 259 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 259 (796)
++++..+..|.++++|++|+|++|++++..+..|.++++|+.|++++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88776666777777777777777777777666677777777777777777766555566677777777777766532
Q ss_pred cccCCcccceeecccccccccCcccccccc
Q 003780 260 EIGNMTGILKVDMSMNNIEGTIPLELTRLS 289 (796)
Q Consensus 260 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 289 (796)
+++|+.|+++.|+++|.+|..++.++
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ----CCCHHHHHHHHHhCCceeeccCcccc
Confidence 23556666666666666666555443
No 348
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.88 E-value=1.9e-24 Score=251.34 Aligned_cols=300 Identities=15% Similarity=0.071 Sum_probs=141.0
Q ss_pred CCeEEEeCCCCCcccc----ccccccCCCCCCcEEeccCCccc----ccCCcCccCCCCCcEeecccCcCCCCCCCCCCC
Q 003780 72 RSIIEINLPEKKLKGE----LSQFNFSCFPGLESLSLRFNYLF----GSIPSQVGALSKLRYLDFSFNNLTGSIPPELGS 143 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 143 (796)
.++..|+|+++.+.+. ++. .+..+++|++|+|++|.+. +.++..+.++++|++|+|++|.+.+ +|..+.+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~-~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHE-LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHH-HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHH-HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 4577788888776543 221 2345677777777777776 2334445667777777777777664 4455555
Q ss_pred CCCCCEEEecCCCCC---CCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCc------------
Q 003780 144 LRNLEVLNLKGNNLN---GAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGM------------ 208 (796)
Q Consensus 144 l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------ 208 (796)
+++|++|+++++... +..+..+..+++|+.|+++++.. +.+|..+..+++|++|+|++|.+++.
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 666666666542221 12223334444444444444321 23344444444444444444444322
Q ss_pred -------------chhhhcCCCCccccccC-----------CccccccC-CCcccccCccceEEeccccccccCCccccC
Q 003780 209 -------------LHQELGKLKNLVALNVG-----------GNKLMGPI-PSTLFRLTNLTYLYLHSNHLNGSIPPEIGN 263 (796)
Q Consensus 209 -------------~~~~~~~l~~L~~L~l~-----------~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 263 (796)
++..+..+++|++|+++ .|.+++.. +.....+++|++|+++.|++++..+..++.
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 22223344445555554 23333211 111223445555555555554443333333
Q ss_pred -Ccccceeecc----ccccccc-----CccccccccccccccccCc--cccCcccccccc-ccccceeccccccccc-CC
Q 003780 264 -MTGILKVDMS----MNNIEGT-----IPLELTRLSQLLYLSISSN--MLSGQIPITIAG-LISLKGLDLSNNKLSG-PI 329 (796)
Q Consensus 264 -l~~L~~L~Ls----~N~l~~~-----~p~~l~~l~~L~~L~l~~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~ 329 (796)
+++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++..+..+.. +++|++|+|++|++++ .+
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 4445555553 3444432 2222344455555555422 233332222222 4455555555555543 12
Q ss_pred CcccCCCCCCcEEEeecccccCCCCccc--cccccceEEecccccCC
Q 003780 330 PPEIGKCSELRNITLRNNNLSGSIPPEI--GLMKLEYLDLSHNKLNG 374 (796)
Q Consensus 330 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~~~L~~L~l~~N~l~~ 374 (796)
+..+..+++|+.|+|++|.+++.....+ .+++|++|+|++|++++
T Consensus 481 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 2233445555555555555443211111 24455555555555543
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.5e-22 Score=228.31 Aligned_cols=189 Identities=24% Similarity=0.305 Sum_probs=153.5
Q ss_pred CCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecc
Q 003780 98 GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALS 177 (796)
Q Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (796)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 666553 78999999999999 567 457899999999999997 666 655 89999999
Q ss_pred ccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccC
Q 003780 178 RNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSI 257 (796)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 257 (796)
+|+|++ +|. .+++|+.|+|++|+|+++. . .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp-~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTMLP-E---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcCC-C---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999997 555 6789999999999998744 3 57889999999999986 665 55 88999999999998 66
Q ss_pred CccccCCccc-------ceeecccccccccCccccccccccccccccCccccCccccccccccc
Q 003780 258 PPEIGNMTGI-------LKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLIS 314 (796)
Q Consensus 258 p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 314 (796)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 76 654 67 88899998888 56777777888888888888888888877766544
No 350
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.87 E-value=4.2e-25 Score=256.84 Aligned_cols=247 Identities=9% Similarity=-0.010 Sum_probs=167.3
Q ss_pred CeEEEeCCCCC-ccccccccccCCCCCCcEEeccCCccccc----CCcCccCCCCCcEeecccCcCCCC----CCCCCCC
Q 003780 73 SIIEINLPEKK-LKGELSQFNFSCFPGLESLSLRFNYLFGS----IPSQVGALSKLRYLDFSFNNLTGS----IPPELGS 143 (796)
Q Consensus 73 ~v~~l~l~~~~-l~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~ 143 (796)
++..|+++++. +...--......+++|++|+|++|.+.+. ++..+..+++|++|+|++|.+++. ++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48889888765 21110011134789999999999998765 444567889999999999999843 3344567
Q ss_pred CCCCCEEEecCCCCCCCCchhhhccCccceeeccccccC---CCCCccccCCCCccEEEcccccccCcchhhhcCCCCcc
Q 003780 144 LRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLH---GPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLV 220 (796)
Q Consensus 144 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 220 (796)
+++|++|+|++|.+.+ +|..+.++++|++|+++.+... +..+..+..+++|+.|+++++.. ..+|..+..+++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCc
Confidence 8999999999999985 7899999999999999875433 34556788899999999998643 45677888999999
Q ss_pred ccccCCccccccCC-CcccccCccceEEeccccccccCCccccCCcccceeecc-----------cccccccCc-ccccc
Q 003780 221 ALNVGGNKLMGPIP-STLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMS-----------MNNIEGTIP-LELTR 287 (796)
Q Consensus 221 ~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~p-~~l~~ 287 (796)
+|+|++|.+++... ..+..+++|++|+++++-..+.++..+..+++|++|+|+ .|.+++... .....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 99999999865432 235667777777777332222223333445566666666 345543221 12334
Q ss_pred ccccccccccCccccCcccccccc-ccccceeccc
Q 003780 288 LSQLLYLSISSNMLSGQIPITIAG-LISLKGLDLS 321 (796)
Q Consensus 288 l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls 321 (796)
+++|++|+++.|.+++..+..+.. +++|+.|+++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 555666666555555544444433 5555555554
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.8e-22 Score=210.40 Aligned_cols=157 Identities=15% Similarity=0.167 Sum_probs=123.5
Q ss_pred cHHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhh---------------HHHHHHHHHHHHHhh
Q 003780 490 AFEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEET---------------TFFNSFQNEAHVLSK 554 (796)
Q Consensus 490 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~ 554 (796)
+...+......|++.+.||+|+||.||+|...+|+.||+|.++....... .....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 34455556677888899999999999999887899999999975432111 124578999999999
Q ss_pred cCCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 555 IAHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 555 l~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
++ | +++.+++. .+..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|
T Consensus 161 l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 161 LQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp TT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred cc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 99 4 56666543 356799999999999987 421 12346999999999999999 99999999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccc
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAY 677 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 677 (796)
||++ ++.+||+|||+|+.. ..|.|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence 9999 999999999999742 3478898864
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=8.9e-21 Score=191.58 Aligned_cols=160 Identities=25% Similarity=0.278 Sum_probs=109.8
Q ss_pred CCCCCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCC
Q 003780 56 NSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTG 135 (796)
Q Consensus 56 ~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 135 (796)
.+...|.|++|.|+..+ +. .++. +-.++|++|+|++|.|.+..|..|..+++|++|+|++|.|+.
T Consensus 14 ~~~~~Cs~~~v~c~~~~-----------l~-~ip~---~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKR-----------HA-SVPA---GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp CTTCEEETTEEECTTSC-----------CS-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEEeCCEeEccCCC-----------cC-ccCC---CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 46788999999997432 11 1221 122677777777777777777777777777777777777776
Q ss_pred CCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcC
Q 003780 136 SIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGK 215 (796)
Q Consensus 136 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 215 (796)
..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 55566777777777777777777666666777777777777777777 45666666777777777777666665555666
Q ss_pred CCCccccccCCccccc
Q 003780 216 LKNLVALNVGGNKLMG 231 (796)
Q Consensus 216 l~~L~~L~l~~N~l~~ 231 (796)
+++|+.|+|++|.+..
T Consensus 158 l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CTTCCEEECTTSCBCT
T ss_pred CCCCCEEEeeCCCccC
Confidence 6666666666666553
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=4.5e-21 Score=201.23 Aligned_cols=172 Identities=25% Similarity=0.365 Sum_probs=106.1
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
..+++|+.|++++|.+.+. + .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++ + ..+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCE
Confidence 3456667777777766644 2 36666777777777777765433 6667777777777777664 2 23666666666
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|+.|++++|++++..+ +..+++|++|+|++|++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666666653 3466666666666666666654 456666666666666666665433 55666666666666666
Q ss_pred cccCCccccCCcccceeecccccccc
Q 003780 254 NGSIPPEIGNMTGILKVDMSMNNIEG 279 (796)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 279 (796)
++ +| .+..+++|+.|++++|+++.
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccC
Confidence 53 23 25555666666666666554
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=2.9e-21 Score=202.69 Aligned_cols=189 Identities=26% Similarity=0.329 Sum_probs=133.6
Q ss_pred CcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 99 LESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
+..+.+..+.+.+..+ +..+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3444566666654433 45678888888888888844 3 47888888888888888886544 88888888888888
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCC
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIP 258 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 258 (796)
|++++. ..+..+++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++..|
T Consensus 100 n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 888752 3477888888888888888765 4577777777777777777754 456777777777777777775433
Q ss_pred ccccCCcccceeecccccccccCccccccccccccccccCccccC
Q 003780 259 PEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSG 303 (796)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (796)
+..+++|+.|+|++|++++. | .+..+++|+.|++++|+++.
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred --hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 66677777777777777643 2 35666666666666666654
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=7e-21 Score=218.85 Aligned_cols=173 Identities=24% Similarity=0.341 Sum_probs=96.2
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
..|++|+.|+|++|.+... + .+..+++|++|+|++|.|++..| +..+++|+.|+|++|+|++. | .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 3445556666666665533 2 35556666666666666654433 55666666666666666532 2 4555566666
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
|+|++|+|++. ..+..+++|+.|+|++|+++++ ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 66666665542 2355556666666666665554 445555556666666665554444 55555566666666655
Q ss_pred cccCCccccCCcccceeeccccccccc
Q 003780 254 NGSIPPEIGNMTGILKVDMSMNNIEGT 280 (796)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (796)
++. ..+..+++|+.|+|++|++.+.
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCC--hHHccCCCCCEEEccCCcCcCC
Confidence 532 2355555555555555555543
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=3.3e-21 Score=221.63 Aligned_cols=198 Identities=25% Similarity=0.305 Sum_probs=161.6
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
..+..+.|+.+.+.+..+ +..+.+|++|+|++|.|.. +| .|..+++|+.|+|++|+|++..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345666777777776544 6788999999999999984 34 58999999999999999997655 899999999999
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|.|++. ..+..+++|+.|+|++|+++++ ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 95 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 99999863 3688999999999999999875 4588889999999999999865 5788888999999999998876
Q ss_pred CCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccc
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIA 310 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 310 (796)
.| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+.....+.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 55 88888888888888888864 3578888888888888888765443333
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.2e-21 Score=230.99 Aligned_cols=249 Identities=20% Similarity=0.142 Sum_probs=81.7
Q ss_pred CCccccCCC-CCCCCCccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCc
Q 003780 46 SSWWSNLID-SNSSDHCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLR 124 (796)
Q Consensus 46 ~~w~~~~~~-~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 124 (796)
.+|..+..+ ..++..+.|.+++++. .+++.++|..+++..... ..|+.++|+.|.|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~-------~~l~~l~Ls~~~i~~------------- 205 (727)
T 4b8c_D 147 SKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQ-------ALLQHKKLSQYSIDE------------- 205 (727)
T ss_dssp HHTTC---------------------------------------------------------------------------
T ss_pred ccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchh-------hHhhcCccCcccccC-------------
Confidence 445443222 2234567899998876 568889888887765322 335556666665543
Q ss_pred EeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEccccc
Q 003780 125 YLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNK 204 (796)
Q Consensus 125 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (796)
++++.|.+. ..|..|..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|.
T Consensus 206 -~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 206 -DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred -cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 233344444 44555555555555555555555 44444555555666666666555 455555555666666666666
Q ss_pred ccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcc-cceeecccccccccCcc
Q 003780 205 LSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTG-ILKVDMSMNNIEGTIPL 283 (796)
Q Consensus 205 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 283 (796)
|+ .+|..|+++++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 55 33555555666666666666555 44555566666666666666666555555443322 12355666666655554
Q ss_pred ccccccccccccccCc--------cccCccccccccccccceeccccccccc
Q 003780 284 ELTRLSQLLYLSISSN--------MLSGQIPITIAGLISLKGLDLSNNKLSG 327 (796)
Q Consensus 284 ~l~~l~~L~~L~l~~N--------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 327 (796)
. |..|+++.| .+.+..+..+..+.++....+++|-+.+
T Consensus 360 ~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 360 E------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp C-----------------------------------------------CCCG
T ss_pred c------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 3 334444444 3333444445556666677777777653
No 358
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.83 E-value=3.7e-23 Score=240.49 Aligned_cols=320 Identities=14% Similarity=0.117 Sum_probs=192.1
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCC-ccccc-CCcCccCCCCCcEeecccCcCCCCCCCCCC----CCC
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFN-YLFGS-IPSQVGALSKLRYLDFSFNNLTGSIPPELG----SLR 145 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~----~l~ 145 (796)
.+++.|+++++.+.+.....-...+++|++|+|++| .+... ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 468888888887766443322225789999999988 55432 444455788999999999988765544443 567
Q ss_pred CCCEEEecCCCCCCCCchh----hhccCccceeecccc-ccCCCCCccccCCCCccEEEccccc----------------
Q 003780 146 NLEVLNLKGNNLNGAIPSS----LCQLTKLITMALSRN-GLHGPIPSAIGDLNNLLILSLDSNK---------------- 204 (796)
Q Consensus 146 ~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~---------------- 204 (796)
+|++|+|++|. ....+.. +.++++|+.|+|++| .+.+ +|..+..+++|++|+++.+.
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 89999999887 2122222 345688999999888 3333 55666666777777654431
Q ss_pred ----------ccC----cchhhhcCCCCccccccCCccccccC-CCcccccCccceEEecccccccc-CCccccCCcccc
Q 003780 205 ----------LSG----MLHQELGKLKNLVALNVGGNKLMGPI-PSTLFRLTNLTYLYLHSNHLNGS-IPPEIGNMTGIL 268 (796)
Q Consensus 205 ----------l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~ 268 (796)
+.. .++..+..+++|++|++++|.+++.. +..+..+++|++|++++| ++.. ++.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 111 12333345678888888888866432 222456778888888877 4322 222223466777
Q ss_pred eeec---------ccccccccCccccc-cccccccccccCccccCccccccc-cccccceeccc--c----cccccCC--
Q 003780 269 KVDM---------SMNNIEGTIPLELT-RLSQLLYLSISSNMLSGQIPITIA-GLISLKGLDLS--N----NKLSGPI-- 329 (796)
Q Consensus 269 ~L~L---------s~N~l~~~~p~~l~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~-- 329 (796)
.|++ +.|.+++.....+. .+++|++|.++.|.+++.....+. .+++|+.|+|+ + |.+++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 7777 33455543333333 367777777777777655544444 46677777777 3 3444211
Q ss_pred ---CcccCCCCCCcEEEeecccccCCCCcccc--ccccceEEecccccCCCCCc----cccccccccccCCCCcc
Q 003780 330 ---PPEIGKCSELRNITLRNNNLSGSIPPEIG--LMKLEYLDLSHNKLNGTIPP----FLYHRFPLDLSYNDLEG 395 (796)
Q Consensus 330 ---~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~L~~L~l~~N~l~~~~p~----~~~~~~~l~l~~N~l~~ 395 (796)
+..+..+++|+.|+|++ .+++..+..+. +++|++|+|++|.+++..+. .+.++..|++++|.+++
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 11244566777777755 44443332221 55677777777776543332 23455667777776643
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=204.92 Aligned_cols=152 Identities=27% Similarity=0.247 Sum_probs=93.9
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCC-CCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELG-SLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
+.++++++++.. +|..+. ..+++|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 467777777764 444443 3467777777777766666666 777777777777777766666677777777777777
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcc---cccCccceEEecccccc
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTL---FRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l---~~l~~L~~L~L~~N~l~ 254 (796)
|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 77666656666666666666666666666555556666666666666665554333222 23444444444444444
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=3.7e-20 Score=185.76 Aligned_cols=151 Identities=19% Similarity=0.205 Sum_probs=78.1
Q ss_pred EEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCC-CCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 101 SLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIP-PELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 101 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
.+++++|.++. +|..+. ..+++|+|++|.|++..| ..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 56666666653 343332 234566666666664433 23555666666666666665554555555555555555555
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
++++..+..|.++++|++|+|++|+|+++.|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555555555555555555555555555444444444444444444444444444444444444444444444443
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.7e-20 Score=185.70 Aligned_cols=134 Identities=26% Similarity=0.334 Sum_probs=79.8
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|+.|+|++|.|.++.+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666666666666666666666666666666666666666666666666666544445555666666666
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666665555555555555555555555555554444444444444444444443
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.5e-20 Score=185.90 Aligned_cols=152 Identities=21% Similarity=0.254 Sum_probs=98.5
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.+++++++++. +|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 456777777764 344333 56777777777777666666777777777777777777666677777777777777777
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++..+..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 776655555666666666666666666666666666666666666666666555555555555555555555554
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=4.6e-23 Score=235.68 Aligned_cols=203 Identities=18% Similarity=0.160 Sum_probs=132.9
Q ss_pred CCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccc-------------cCCCCCccccCCCCccEEE-cccccccC
Q 003780 142 GSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNG-------------LHGPIPSAIGDLNNLLILS-LDSNKLSG 207 (796)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 207 (796)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 34556666666666665 556666666666666665553 3445555666666666666 555433
Q ss_pred cchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCcccccc
Q 003780 208 MLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTR 287 (796)
Q Consensus 208 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 287 (796)
.+|+.+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|++
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234455555565553222 246777777777774 555 777777777777777777 56777777
Q ss_pred ccccccccccCccccCccccccccccccceecccccccccCC-CcccCCCCCCcEEEeecccccCCCCccc----ccccc
Q 003780 288 LSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPI-PPEIGKCSELRNITLRNNNLSGSIPPEI----GLMKL 362 (796)
Q Consensus 288 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~~~L 362 (796)
+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++.. |..++.+++|+.|+|++|++++..|... .+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 7777777777777775 45 6777777777778777777765 7777778888888888888776655332 25677
Q ss_pred ceEEe
Q 003780 363 EYLDL 367 (796)
Q Consensus 363 ~~L~l 367 (796)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 77764
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.2e-20 Score=202.49 Aligned_cols=175 Identities=25% Similarity=0.216 Sum_probs=152.2
Q ss_pred EEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCcc-CCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 76 EINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVG-ALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 76 ~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
.+++++++++..... -.+.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 22 ~l~c~~~~l~~iP~~----~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLPNVPQS----LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCSSCCSS----CCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcCccCcc----CCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666777653222 235689999999999999888888 999999999999999988888999999999999999
Q ss_pred CCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhh---cCCCCccccccCCccccc
Q 003780 155 NNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQEL---GKLKNLVALNVGGNKLMG 231 (796)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~ 231 (796)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++.+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888899999999999999999999999999999999999999999999888777 679999999999999997
Q ss_pred cCCCcccccCc--cceEEecccccc
Q 003780 232 PIPSTLFRLTN--LTYLYLHSNHLN 254 (796)
Q Consensus 232 ~~~~~l~~l~~--L~~L~L~~N~l~ 254 (796)
..+..+..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 76677777776 477888888776
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=4.1e-20 Score=185.38 Aligned_cols=153 Identities=20% Similarity=0.193 Sum_probs=120.4
Q ss_pred EEeCCCCCccccccccccCCCCCCcEEeccCCcccccCC-cCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 76 EINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIP-SQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 76 ~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
.+++++++++. ++.. -.+.+++|+|++|.|++..+ ..|..+++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~~-iP~~---~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEH---IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCSS-CCSC---CCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCccc-CccC---CCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 34455555554 2221 12456788888888887754 4578888888888888888877777888888888888888
Q ss_pred CCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccccc
Q 003780 155 NNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP 232 (796)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 232 (796)
|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 888887778888888888888888888888888888888888888888888888888888888888888888888754
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.4e-22 Score=231.59 Aligned_cols=204 Identities=20% Similarity=0.172 Sum_probs=163.4
Q ss_pred cCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCC-------------CCCCCchhhhccCccceee-ccccccCC
Q 003780 118 GALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNN-------------LNGAIPSSLCQLTKLITMA-LSRNGLHG 183 (796)
Q Consensus 118 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 183 (796)
..+++|+.|+|++|.|+ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788888899988887 778888888888888887765 5667788888888888888 777654
Q ss_pred CCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccC
Q 003780 184 PIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGN 263 (796)
Q Consensus 184 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 263 (796)
.+|+.+.+++|.++.+.+. .|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+ .+|..+++
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 3567777888887765432 47888888888886 565 888888999999999888 77888888
Q ss_pred CcccceeecccccccccCccccccccccccccccCccccCcc-ccccccccccceecccccccccCCCcc---cCCCCCC
Q 003780 264 MTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQI-PITIAGLISLKGLDLSNNKLSGPIPPE---IGKCSEL 339 (796)
Q Consensus 264 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~L 339 (796)
+++|+.|+|++|+|++ +| .++++++|++|+|++|.|++.. |..+..+++|+.|+|++|.+++.+|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 8889999999998886 56 7888888999999999888876 888888888999999999888765432 2347888
Q ss_pred cEEEe
Q 003780 340 RNITL 344 (796)
Q Consensus 340 ~~L~L 344 (796)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 88864
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=2.4e-20 Score=192.57 Aligned_cols=171 Identities=25% Similarity=0.270 Sum_probs=129.1
Q ss_pred CCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 95 CFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
.+.++..+++++|.+.+.. .+..+++|++|++++|.|+. +| .+..+++|++|+|++|+|++..| +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3455667778888877554 57778888888888888874 44 67888888888888888886544 8888888888
Q ss_pred eccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 175 ALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++|++++..+ +.. ++|++|+|++|++++. ..+..+++|+.|++++|++++. + .+..+++|++|+|++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888886432 222 7888888888888865 3577888888888888888764 3 5777888888888888887
Q ss_pred ccCCccccCCcccceeeccccccccc
Q 003780 255 GSIPPEIGNMTGILKVDMSMNNIEGT 280 (796)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (796)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5677778888888888887755
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.6e-19 Score=180.81 Aligned_cols=151 Identities=26% Similarity=0.283 Sum_probs=75.9
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.++.+++.+. .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44666666555 2333222 55666666666666555555666666666666666665444444555555555555555
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555544444555555555555555544 22333344444444444444444333333444444444444444433
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=6.8e-21 Score=196.65 Aligned_cols=171 Identities=22% Similarity=0.324 Sum_probs=125.6
Q ss_pred CCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 119 ALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 119 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
.+.++..+++++|.+++.. .+..+++|++|+|++|+++. +| .+..+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667888888888888543 57888899999999998884 44 67888888888888888886554 8888888888
Q ss_pred EcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccccc
Q 003780 199 SLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIE 278 (796)
Q Consensus 199 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 278 (796)
+|++|++++..+ +.. ++|+.|++++|++++. ..+..+++|++|+|++|++++. + .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888876533 222 7777777777777753 2477777777777777777753 3 5667777777777777777
Q ss_pred ccCccccccccccccccccCccccCc
Q 003780 279 GTIPLELTRLSQLLYLSISSNMLSGQ 304 (796)
Q Consensus 279 ~~~p~~l~~l~~L~~L~l~~N~l~~~ 304 (796)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5566667777777777766644
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=2.3e-20 Score=219.99 Aligned_cols=224 Identities=21% Similarity=0.190 Sum_probs=128.9
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
+.++.|+|.+|.+... + ...|+.++|+.|.|.+ ++++.|++. ..|..+..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~~-~-----~~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-N-----QALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcc-h-----hhHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 5567777777777642 2 2345666777766552 355667776 77899999999999999
Q ss_pred cccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..|.++++|++|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 999999 66777779999999999999999 67888999999999999999999 67999999999999999999998 7
Q ss_pred CCccccCCcccceeecccccccccCccccccccc-cccccccCccccCccccccccccccceeccccc--------cccc
Q 003780 257 IPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQ-LLYLSISSNMLSGQIPITIAGLISLKGLDLSNN--------KLSG 327 (796)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~ 327 (796)
+|..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |..|++++| .|.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 8988999999999999999999999998876533 345899999999988864 566777777 4555
Q ss_pred CCCcccCCCCCCcEEEeecccccC
Q 003780 328 PIPPEIGKCSELRNITLRNNNLSG 351 (796)
Q Consensus 328 ~~~~~~~~l~~L~~L~L~~N~l~~ 351 (796)
..+..+..+..+....++.|-+.+
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp --------------------CCCG
T ss_pred cccchhhcccccceeeeecccccc
Confidence 555566677778888888888764
No 371
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.79 E-value=9.9e-22 Score=228.43 Aligned_cols=319 Identities=13% Similarity=0.081 Sum_probs=225.3
Q ss_pred CCeEEEeCCCC-CccccccccccCCCCCCcEEeccCCcccccCCcCc----cCCCCCcEeecccCcCCCCCCCC----CC
Q 003780 72 RSIIEINLPEK-KLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQV----GALSKLRYLDFSFNNLTGSIPPE----LG 142 (796)
Q Consensus 72 ~~v~~l~l~~~-~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~Ls~n~l~~~~p~~----~~ 142 (796)
.++..|++.++ .+...--...+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|. ....... +.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 46888998887 44432112224578999999999999887554433 467899999999997 2111122 34
Q ss_pred CCCCCCEEEecCC-CCCCCCchhhhccCccceeeccccc--------------------------cCCC----CCccccC
Q 003780 143 SLRNLEVLNLKGN-NLNGAIPSSLCQLTKLITMALSRNG--------------------------LHGP----IPSAIGD 191 (796)
Q Consensus 143 ~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~--------------------------l~~~----~p~~~~~ 191 (796)
++++|++|+|++| .+. .+|..+..+++|+.|+++.+. +... ++..+..
T Consensus 209 ~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~ 287 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSV 287 (594)
T ss_dssp HCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHH
T ss_pred hCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHh
Confidence 5699999999998 444 377788888888888866542 2211 3333446
Q ss_pred CCCccEEEcccccccCcch-hhhcCCCCccccccCCcccccc-CCCcccccCccceEEecc---------ccccccCCcc
Q 003780 192 LNNLLILSLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGP-IPSTLFRLTNLTYLYLHS---------NHLNGSIPPE 260 (796)
Q Consensus 192 l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~---------N~l~~~~p~~ 260 (796)
+++|++|+|++|.+++... ..+..+++|++|++++| ++.. ++.....+++|++|+|.+ |.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 7899999999999775433 34678999999999998 4422 222233588999999943 4555433333
Q ss_pred cc-CCcccceeecccccccccCccccc-ccccccccccc--C----ccccCc-----cccccccccccceeccccccccc
Q 003780 261 IG-NMTGILKVDMSMNNIEGTIPLELT-RLSQLLYLSIS--S----NMLSGQ-----IPITIAGLISLKGLDLSNNKLSG 327 (796)
Q Consensus 261 ~~-~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~l~--~----N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~ 327 (796)
+. ++++|+.|+++.|++++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 33 478999999999999877666665 58999999999 4 556522 223366788999999987 6666
Q ss_pred CCCcccCC-CCCCcEEEeecccccCCCCccc--cccccceEEecccccCCCCC----ccccccccccccCCCCc
Q 003780 328 PIPPEIGK-CSELRNITLRNNNLSGSIPPEI--GLMKLEYLDLSHNKLNGTIP----PFLYHRFPLDLSYNDLE 394 (796)
Q Consensus 328 ~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~--~~~~L~~L~l~~N~l~~~~p----~~~~~~~~l~l~~N~l~ 394 (796)
..+..++. +++|+.|+|++|.+++..+..+ ++++|+.|+|++|++++..+ ..+.++..|++++|.++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 55555555 8899999999999876544433 47899999999999964333 23456778999999874
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=4.8e-19 Score=174.49 Aligned_cols=154 Identities=13% Similarity=0.220 Sum_probs=104.6
Q ss_pred ccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCcc
Q 003780 117 VGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLL 196 (796)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 196 (796)
.+.+++|++|++++|.|+ .+| .+..+++|++|+|++|.++. +..+..+++|++|++++|++++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 355667777777777777 444 57777777777777776552 24667777777777777777766667777777777
Q ss_pred EEEcccccccCcchhhhcCCCCccccccCCcc-ccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccc
Q 003780 197 ILSLDSNKLSGMLHQELGKLKNLVALNVGGNK-LMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMN 275 (796)
Q Consensus 197 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 275 (796)
+|+|++|++++..+..+..+++|++|++++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 77777777777667777777777777777776 44 334 56677777777777777764 33 4666666666666666
Q ss_pred ccc
Q 003780 276 NIE 278 (796)
Q Consensus 276 ~l~ 278 (796)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 655
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=3.4e-19 Score=175.51 Aligned_cols=155 Identities=19% Similarity=0.245 Sum_probs=129.2
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
...+++|++|++++|.+. .+| .+..+++|++|++++|.++. ++.+..+++|++|+|++|++++..|..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 355678899999999988 445 68889999999999997763 34788899999999999999887888899999999
Q ss_pred eeeccccccCCCCCccccCCCCccEEEccccc-ccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNK-LSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSN 251 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N 251 (796)
+|+|++|++++..|..+..+++|++|+|++|. ++.. + .+..+++|+.|++++|++++. + .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 99999999998788889999999999999998 6654 4 688999999999999999864 3 6888999999999999
Q ss_pred cccc
Q 003780 252 HLNG 255 (796)
Q Consensus 252 ~l~~ 255 (796)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9864
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=8.4e-19 Score=171.86 Aligned_cols=171 Identities=20% Similarity=0.241 Sum_probs=102.6
Q ss_pred ccccCCccccccCCCcccccCccceEEeccccccccCCc-cccCCcccceeecccccccccCccccccccccccccccCc
Q 003780 221 ALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPP-EIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSN 299 (796)
Q Consensus 221 ~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 299 (796)
.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4455555554 33433322 566666666666654443 3566666666666666666666666666666666666666
Q ss_pred cccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccccccccceEEecccccCCCCCcc
Q 003780 300 MLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEIGLMKLEYLDLSHNKLNGTIPPF 379 (796)
Q Consensus 300 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~p~~ 379 (796)
+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+...-...++...+..+......|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 66666666667777777777777777777777777777777777777777765442221112333334445555555655
Q ss_pred ccccccccccCCCCc
Q 003780 380 LYHRFPLDLSYNDLE 394 (796)
Q Consensus 380 ~~~~~~l~l~~N~l~ 394 (796)
+......++..+.+.
T Consensus 169 l~~~~l~~l~~~~~~ 183 (192)
T 1w8a_A 169 VRDVQIKDLPHSEFK 183 (192)
T ss_dssp TTTSBGGGSCTTTCC
T ss_pred HcCCChhhCcHhhcC
Confidence 555555555555554
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=5e-18 Score=174.59 Aligned_cols=141 Identities=22% Similarity=0.241 Sum_probs=107.7
Q ss_pred cCCccceeeecccceeEEEEEc-cCCcE--EEEEEeccccchh---------------------hHHHHHHHHHHHHHhh
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQL-PNGKV--VALKKLHRAETEE---------------------TTFFNSFQNEAHVLSK 554 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~ 554 (796)
.-|++.+.||+|+||.||+|.. .+|+. ||||+++...... ......+.+|+..+.+
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999987 68999 9999876542110 0112367899999999
Q ss_pred cCCCce--eeEEeEEEecceeeEEEeeccC-C----cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHh-hcCCCCeE
Q 003780 555 IAHRNI--VKLYGFCLHKKCMFLIYKYMKR-G----SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLH-HDCMPSIV 626 (796)
Q Consensus 555 l~hpni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~iv 626 (796)
++|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|+++||.||| +. +|+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 988754 344432 356899999942 4 66665432 123456789999999999999 88 999
Q ss_pred EecCCCCCeEecCCCcEEEeeecccccc
Q 003780 627 HRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 627 H~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999764
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=5.5e-18 Score=166.01 Aligned_cols=128 Identities=23% Similarity=0.265 Sum_probs=60.4
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCC-CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPP-ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSR 178 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (796)
+.|++++|++. .+|..+.. +|++|+|++|.|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34555555553 23333322 555555555555543332 245555555555555555544455555555555555555
Q ss_pred cccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccc
Q 003780 179 NGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 230 (796)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 5554444444444444444444444444444444444444444444444443
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=1.3e-17 Score=159.53 Aligned_cols=133 Identities=20% Similarity=0.184 Sum_probs=101.0
Q ss_pred CCCCcEEeccCCccc-ccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 96 FPGLESLSLRFNYLF-GSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 96 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
.++|+.|+|++|.+. +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 67777778888888888888888865 678888888888888888887777777778888888
Q ss_pred eccccccCCCC-CccccCCCCccEEEcccccccCcch---hhhcCCCCccccccCCcccc
Q 003780 175 ALSRNGLHGPI-PSAIGDLNNLLILSLDSNKLSGMLH---QELGKLKNLVALNVGGNKLM 230 (796)
Q Consensus 175 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~ 230 (796)
+|++|.+++.. +..+..+++|++|+|++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887642 2667777777777777777776655 46666777777777776665
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=4e-18 Score=182.35 Aligned_cols=236 Identities=13% Similarity=0.139 Sum_probs=128.4
Q ss_pred CCCCcEEeccCCccc--ccCCcCccCCCCCcEeecccCcCCCCCCCCCCC--------CCCCCEEEecCCCCCCCCchhh
Q 003780 96 FPGLESLSLRFNYLF--GSIPSQVGALSKLRYLDFSFNNLTGSIPPELGS--------LRNLEVLNLKGNNLNGAIPSSL 165 (796)
Q Consensus 96 l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 165 (796)
+++|+.|||++|+|. ...+..+ +.++.+++..|.|. +..|.+ +++|+.|+|.+ +++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 788999999999987 3333222 22455555555432 355666 78888888877 7776666777
Q ss_pred hccCccceeeccccccCCCCCccccCCCCccEEEccccc----ccCcchhhhcCCCCcc-ccccCCccccccCCCcc---
Q 003780 166 CQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNK----LSGMLHQELGKLKNLV-ALNVGGNKLMGPIPSTL--- 237 (796)
Q Consensus 166 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~l--- 237 (796)
.++++|+.|++++|.++.+.+.+|.++.++..+.+..+. ...+....|.++.+|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 788888888888887777777777777777777666532 2223334455555555 33332211 011100
Q ss_pred -c------------------------ccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccc
Q 003780 238 -F------------------------RLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLL 292 (796)
Q Consensus 238 -~------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 292 (796)
. .+++|+.|+|++|+++.+.+.+|.++++|+.|+|++| ++.+.+.+|.++++|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 0 1344555555555554333344445555555555444 4444444455555554
Q ss_pred -cccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEE
Q 003780 293 -YLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNIT 343 (796)
Q Consensus 293 -~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 343 (796)
.|++.+ .++.+.+.+|.++++|+.|++++|+++...+.+|.++++|+.|+
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 555544 34434444455555555555555554444444455555444443
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.8e-18 Score=184.98 Aligned_cols=258 Identities=14% Similarity=0.121 Sum_probs=171.8
Q ss_pred CCCCcEEeccCCcccccCCcCccC-CCCCcEeecccCcCC--CCCCCCCCCCCCCCEEEecCCCCCCCCchhhhc-----
Q 003780 96 FPGLESLSLRFNYLFGSIPSQVGA-LSKLRYLDFSFNNLT--GSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQ----- 167 (796)
Q Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 167 (796)
+++|+.|.++++ +....-..+.. +++|++|||++|+|. ...+..+ +.++.+.+..|.|. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhccccccc
Confidence 567888988864 22111122333 789999999999998 3333333 33677777777443 467778
Q ss_pred ---cCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccc----cccCCCccccc
Q 003780 168 ---LTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKL----MGPIPSTLFRL 240 (796)
Q Consensus 168 ---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l----~~~~~~~l~~l 240 (796)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+..|.++.++..+.+..+.. .......|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 99999999999 88888888999999999999999999999999999998888888777432 33445567777
Q ss_pred Cccc-eEEeccccccccCCccc----------------------------cCCcccceeecccccccccCcccccccccc
Q 003780 241 TNLT-YLYLHSNHLNGSIPPEI----------------------------GNMTGILKVDMSMNNIEGTIPLELTRLSQL 291 (796)
Q Consensus 241 ~~L~-~L~L~~N~l~~~~p~~~----------------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 291 (796)
..|+ .+.+.... .++..+ ..+++|+.|+|++|+++...+.+|.++++|
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred cccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 7777 44443221 111100 024566666666666666555666666666
Q ss_pred ccccccCccccCccccccccccccc-eecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEE
Q 003780 292 LYLSISSNMLSGQIPITIAGLISLK-GLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLD 366 (796)
Q Consensus 292 ~~L~l~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~ 366 (796)
+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|++++|+++...+..| ++++|+.++
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66666666 5555566666666666 666666 5555556666666666666666666665544444 355666554
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.3e-17 Score=159.65 Aligned_cols=133 Identities=29% Similarity=0.273 Sum_probs=104.4
Q ss_pred CCCCcEeecccCcCC-CCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 120 LSKLRYLDFSFNNLT-GSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 120 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888999998887 67788888888888888888888865 777888888888888888887777777778888888
Q ss_pred EcccccccCcch-hhhcCCCCccccccCCccccccCC---CcccccCccceEEecccccc
Q 003780 199 SLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIP---STLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 199 ~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~ 254 (796)
+|++|++++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 888888877533 667777777777777777775544 36667777777777777776
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=2.1e-17 Score=154.69 Aligned_cols=128 Identities=20% Similarity=0.220 Sum_probs=101.7
Q ss_pred CCCCcEEeccCCccc-ccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcccee
Q 003780 96 FPGLESLSLRFNYLF-GSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITM 174 (796)
Q Consensus 96 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (796)
.++|+.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888888 77788888888888888888888865 678888888888888888887788888888888888
Q ss_pred eccccccCCC-CCccccCCCCccEEEcccccccCcch---hhhcCCCCccccccC
Q 003780 175 ALSRNGLHGP-IPSAIGDLNNLLILSLDSNKLSGMLH---QELGKLKNLVALNVG 225 (796)
Q Consensus 175 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~ 225 (796)
++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888763 34677777888888888887776655 567777777777765
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.1e-16 Score=154.69 Aligned_cols=135 Identities=22% Similarity=0.239 Sum_probs=95.8
Q ss_pred CccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCC
Q 003780 60 HCKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPP 139 (796)
Q Consensus 60 ~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 139 (796)
.|.|++|.|+..+ ++. ++ ....++|++|+|++|++.+..+..|+.+++|++|+|++|.|++..+.
T Consensus 6 ~C~~~~l~~~~~~-----------l~~-~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSKG-----------LTS-VP---TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSSC-----------CSS-CC---TTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCCC-----------Ccc-CC---CCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 3789888886432 221 11 12236778888888888777666777788888888888888766666
Q ss_pred CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcc
Q 003780 140 ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGML 209 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 209 (796)
.|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+.+..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 6777888888888888887666666777777777777777777666666677777777777777776543
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=3.5e-16 Score=170.88 Aligned_cols=267 Identities=10% Similarity=0.053 Sum_probs=215.8
Q ss_pred CCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccce
Q 003780 94 SCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLIT 173 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (796)
.....++.+.+.+ .+..+...+|.+. +|+.++|..| ++.+...+|.+ .+|+.++|.. .++.+.+.+|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3446778888865 4666777888875 7999999776 77666778888 4799999986 677677788999999999
Q ss_pred eeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccc
Q 003780 174 MALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 253 (796)
++|.+|+++.+...+|. ..+|+.+.|..+ ++.+....|.++++|+.+++..| ++.+...+|.+ .+|+.+.| .|.+
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i 259 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGV 259 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCc
Confidence 99999999877777777 589999999854 88888889999999999999875 66566677777 78999999 5567
Q ss_pred cccCCccccCCcccceeeccccccc-----ccCccccccccccccccccCccccCccccccccccccceecccccccccC
Q 003780 254 NGSIPPEIGNMTGILKVDMSMNNIE-----GTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGP 328 (796)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 328 (796)
+...+.+|.++++|+.+++.+|.+. ...+.+|.++++|+.+.|. |.++.+...+|.++.+|+.++|..| ++.+
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 7666788999999999999888775 4667789999999999998 4577777889999999999999665 7767
Q ss_pred CCcccCCCCCCcEEEeecccccCCCCccc-cc-cccceEEecccccC
Q 003780 329 IPPEIGKCSELRNITLRNNNLSGSIPPEI-GL-MKLEYLDLSHNKLN 373 (796)
Q Consensus 329 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~-~~L~~L~l~~N~l~ 373 (796)
...+|.++ +|+.|++++|.+....+..+ ++ .+++.|++..+.+.
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 78899999 99999999998886555555 34 36888988887654
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=2.9e-17 Score=153.82 Aligned_cols=128 Identities=25% Similarity=0.269 Sum_probs=96.5
Q ss_pred CCCCcEeecccCcCC-CCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 120 LSKLRYLDFSFNNLT-GSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 120 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
.++|++|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367888888888887 67888888888888888888888865 677778888888888888887777777777888888
Q ss_pred EcccccccCc-chhhhcCCCCccccccCCccccccCC---CcccccCccceEEec
Q 003780 199 SLDSNKLSGM-LHQELGKLKNLVALNVGGNKLMGPIP---STLFRLTNLTYLYLH 249 (796)
Q Consensus 199 ~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~l~~l~~L~~L~L~ 249 (796)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888877764 34666777777777777777765544 356666666666654
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.5e-16 Score=155.74 Aligned_cols=126 Identities=25% Similarity=0.353 Sum_probs=60.9
Q ss_pred EeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEccccc
Q 003780 125 YLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNK 204 (796)
Q Consensus 125 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (796)
++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3444444444 3333322 34555555555554 334445555555555555555554444445555555555555555
Q ss_pred ccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEecccccc
Q 003780 205 LSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 205 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (796)
|+++.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55444444444455555555555554444444444555555555555544
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=4.7e-16 Score=169.93 Aligned_cols=243 Identities=9% Similarity=0.074 Sum_probs=167.0
Q ss_pred CCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEE
Q 003780 119 ALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLIL 198 (796)
Q Consensus 119 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (796)
.+..++.+.+.. .++.+...+|.+. +|+.++|..| ++.+...+|.+ .+|+.+.+.. .++.+.+.+|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 346667777754 4554556667764 6888887666 66555666766 4677777775 6666666777788888888
Q ss_pred EcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeeccccccc
Q 003780 199 SLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIE 278 (796)
Q Consensus 199 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 278 (796)
+|++|.++.+....|. ..+|+.+.|.++ ++.+...+|.++++|+.++|..| ++.....+|.+ .+|+.+.| .|.++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 8887777777666776 477888877744 66666677777778888887764 55445556666 67777777 45566
Q ss_pred ccCccccccccccccccccCcccc-----CccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCC
Q 003780 279 GTIPLELTRLSQLLYLSISSNMLS-----GQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSI 353 (796)
Q Consensus 279 ~~~p~~l~~l~~L~~L~l~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 353 (796)
.....+|.++++|+.+.+.+|.+. .+.+..|.++++|+.++|. +.++.+...+|.++++|+.|.|..| ++..-
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 566677777888888887777664 3556677777788888887 3466666677777788888888544 55444
Q ss_pred CccccccccceEEecccccC
Q 003780 354 PPEIGLMKLEYLDLSHNKLN 373 (796)
Q Consensus 354 ~~~~~~~~L~~L~l~~N~l~ 373 (796)
+..|...+|+.+++++|.+.
T Consensus 339 ~~aF~~~~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 339 FSAFNNTGIKEVKVEGTTPP 358 (401)
T ss_dssp TTSSSSSCCCEEEECCSSCC
T ss_pred HHhCCCCCCCEEEEcCCCCc
Confidence 44553227888888877665
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=155.00 Aligned_cols=109 Identities=23% Similarity=0.269 Sum_probs=64.5
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 45666666666665 34455666666666666666666555555666666666666666666555555555666666666
Q ss_pred cccccCCCCCccccCCCCccEEEccccccc
Q 003780 177 SRNGLHGPIPSAIGDLNNLLILSLDSNKLS 206 (796)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 206 (796)
++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666655554455555555555555555554
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3.1e-16 Score=151.39 Aligned_cols=126 Identities=22% Similarity=0.245 Sum_probs=54.2
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.+++++|++... |..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 3455555554432 2211 134555555555555444444444555555555555554443334444444444444444
Q ss_pred ccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNK 228 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 228 (796)
++++..+..|..+++|++|+|++|+++++.+..+..+++|++|++++|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCC
Confidence 4444333334444444444444444443333333333333333333333
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=3.2e-18 Score=168.69 Aligned_cols=154 Identities=25% Similarity=0.308 Sum_probs=105.3
Q ss_pred CCCCCCcEEeccCCcccccCCc------CccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhc
Q 003780 94 SCFPGLESLSLRFNYLFGSIPS------QVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQ 167 (796)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 167 (796)
...+.++.++++.+.+.|.+|. .|..+++|++|+|++|.|++ +| .+.++++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445666667777777766665 67777788888888887775 55 7777778888888888777 56667777
Q ss_pred cCccceeeccccccCCCCCccccCCCCccEEEcccccccCcch-hhhcCCCCccccccCCccccccCCCc----------
Q 003780 168 LTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIPST---------- 236 (796)
Q Consensus 168 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~---------- 236 (796)
+++|+.|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 7777777777777775 33 56777777777777777776543 46667777777777777776554432
Q ss_pred ccccCccceEEecccccc
Q 003780 237 LFRLTNLTYLYLHSNHLN 254 (796)
Q Consensus 237 l~~l~~L~~L~L~~N~l~ 254 (796)
+..+++|+.|+ +|.++
T Consensus 170 ~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHCSSCSEEC--CGGGT
T ss_pred HHhCCCcEEEC--CcccC
Confidence 55556666554 44443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=7.4e-18 Score=166.05 Aligned_cols=135 Identities=27% Similarity=0.307 Sum_probs=85.4
Q ss_pred ccCCCCCcEeecccCcCCCCCCC------CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCcccc
Q 003780 117 VGALSKLRYLDFSFNNLTGSIPP------ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIG 190 (796)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 190 (796)
+.....++.++++.|.+++..|. .|..+++|++|+|++|++++ +| .+.++++|+.|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566788888888888877776 66777777777777777775 45 6677777777777777776 4556666
Q ss_pred CCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCC-CcccccCccceEEecccccccc
Q 003780 191 DLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIP-STLFRLTNLTYLYLHSNHLNGS 256 (796)
Q Consensus 191 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~ 256 (796)
.+++|++|+|++|+++++ | .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 666677777777766653 2 35555555555555555553221 2344455555555555555443
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=9.4e-16 Score=147.82 Aligned_cols=109 Identities=21% Similarity=0.212 Sum_probs=55.7
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCC-CCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCcc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALS-KLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKL 171 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 171 (796)
+...++|+.|+|++|++... |. +..+. +|++|+|++|.|++. +.|.++++|++|+|++|+|++..|..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34445556666666655533 32 33333 566666666655543 445555555555555555554433444555555
Q ss_pred ceeeccccccCCCCCc--cccCCCCccEEEccccccc
Q 003780 172 ITMALSRNGLHGPIPS--AIGDLNNLLILSLDSNKLS 206 (796)
Q Consensus 172 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~ 206 (796)
++|+|++|+|+. +|. .+..+++|+.|+|++|.++
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 555555555542 232 4444455555555555444
No 392
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=2.2e-15 Score=160.60 Aligned_cols=149 Identities=11% Similarity=0.111 Sum_probs=106.5
Q ss_pred HHHHHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchh---------------hHHH----HHHHHHHHH
Q 003780 491 FEDIIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEE---------------TTFF----NSFQNEAHV 551 (796)
Q Consensus 491 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---------------~~~~----~~~~~E~~~ 551 (796)
+..+.....=|++.+.||+|++|.||+|..++|+.||||+++.....- ..+. -...+|...
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n 166 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF 166 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence 344444444589999999999999999999999999999876432110 0000 112456777
Q ss_pred HhhcCCCcee--eEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEec
Q 003780 552 LSKIAHRNIV--KLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRD 629 (796)
Q Consensus 552 l~~l~hpniv--~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~d 629 (796)
+.++.+.++. ..+++ ...++||||+++++|.++... .....++.|++.+|.|||.. ||||||
T Consensus 167 L~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrD 230 (397)
T 4gyi_A 167 MKALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGD 230 (397)
T ss_dssp HHHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred HHHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence 7777554432 22222 234799999999888654321 12356789999999999998 999999
Q ss_pred CCCCCeEecCCC----------cEEEeeeccccccC
Q 003780 630 ISSNNILLNSKL----------EAFVADFGTARLLD 655 (796)
Q Consensus 630 lkp~NIll~~~~----------~~kl~Dfg~a~~~~ 655 (796)
|||.|||+++++ .+.|+||+-+....
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999999998876 37899999876543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=6.7e-16 Score=148.86 Aligned_cols=133 Identities=20% Similarity=0.223 Sum_probs=79.5
Q ss_pred CccCCCCCcEeecccCcCCCCCCCCCCCCC-CCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCC
Q 003780 116 QVGALSKLRYLDFSFNNLTGSIPPELGSLR-NLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNN 194 (796)
Q Consensus 116 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 194 (796)
.+.++.+|++|+|++|.++. +|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46667777888888887773 343 44443 777777777777754 45666666777777777766554455566666
Q ss_pred ccEEEcccccccCcch-hhhcCCCCccccccCCccccccCCCc----ccccCccceEEeccccc
Q 003780 195 LLILSLDSNKLSGMLH-QELGKLKNLVALNVGGNKLMGPIPST----LFRLTNLTYLYLHSNHL 253 (796)
Q Consensus 195 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~----l~~l~~L~~L~L~~N~l 253 (796)
|++|+|++|+++...+ ..+..+++|+.|++++|.++. +|.. +..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 6666666666654322 245555555555555555542 2332 44455555555555444
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.4e-14 Score=135.09 Aligned_cols=104 Identities=22% Similarity=0.241 Sum_probs=57.3
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.|++++|.+.. +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 456666666553 333332 55566666666666555555555666666666666655554455555555555555555
Q ss_pred ccCCCCCccccCCCCccEEEccccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLS 206 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 206 (796)
+|++..+..|..+++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555544445555555555555555544
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=7.7e-14 Score=133.37 Aligned_cols=87 Identities=24% Similarity=0.200 Sum_probs=59.9
Q ss_pred CCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeec
Q 003780 97 PGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMAL 176 (796)
Q Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (796)
++|++|+|++|.|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 56677777777777666666777777777777777777665556667777777777777777655566667777777777
Q ss_pred cccccCC
Q 003780 177 SRNGLHG 183 (796)
Q Consensus 177 ~~N~l~~ 183 (796)
++|.++.
T Consensus 110 ~~N~~~c 116 (170)
T 3g39_A 110 LNNPWDC 116 (170)
T ss_dssp CSSCBCT
T ss_pred CCCCCCC
Confidence 7776664
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=7.1e-14 Score=134.13 Aligned_cols=104 Identities=23% Similarity=0.248 Sum_probs=63.5
Q ss_pred cEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 100 ESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
+.+++++|.+. .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666664 3444443 56666666666666666666666666666666666666554555566666666666666
Q ss_pred ccCCCCCccccCCCCccEEEccccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLS 206 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 206 (796)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666555445555666666666665554
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.4e-13 Score=132.03 Aligned_cols=105 Identities=22% Similarity=0.193 Sum_probs=70.3
Q ss_pred EEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 75 IEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 75 ~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
+.++++++++.. ++.. + .++|++|+|++|.|.+..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~~-iP~~-~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAG-I--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCSS-CCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCCc-cCCC-c--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 356666666643 3321 1 26677777777777777777777777777777777777765555567777777777777
Q ss_pred CCCCCCCchhhhccCccceeeccccccCC
Q 003780 155 NNLNGAIPSSLCQLTKLITMALSRNGLHG 183 (796)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 183 (796)
|+|++..+..|..+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 77776555567777777777777777663
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.42 E-value=1.8e-12 Score=142.04 Aligned_cols=270 Identities=11% Similarity=0.033 Sum_probs=124.7
Q ss_pred ccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCC------------
Q 003780 88 LSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGN------------ 155 (796)
Q Consensus 88 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N------------ 155 (796)
|....|.+..+|+.+.|.. .++.+...+|.++++|+.++|..+ ++.+....|.++++|+.+.+..+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~ 139 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGC 139 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTC
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecc
Confidence 3344455555566655543 244444555555566666655433 33333444555555555444332
Q ss_pred ---------CCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCC
Q 003780 156 ---------NLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGG 226 (796)
Q Consensus 156 ---------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 226 (796)
.+......+|.++++|+.+.+.++. ..+....|.++.+|+.+.+..| ++.+....|.++..|+.+.+..
T Consensus 140 ~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 140 DFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp CCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 1111223445555666666665432 2244455666666666666554 4444455566666666655554
Q ss_pred ccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccc------------------
Q 003780 227 NKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRL------------------ 288 (796)
Q Consensus 227 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l------------------ 288 (796)
+... +.+......+|+.+.+..+ ++......+.+...|+.+.+..+... .....|..+
T Consensus 218 ~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F 293 (394)
T 4fs7_A 218 SLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTF 293 (394)
T ss_dssp TCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTT
T ss_pred CceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccc
Confidence 4322 1122222344444444322 22123334555555666655544332 333344444
Q ss_pred ---cccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccce
Q 003780 289 ---SQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEY 364 (796)
Q Consensus 289 ---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~ 364 (796)
.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..| ++..-...| ++.+|+.
T Consensus 294 ~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 294 YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 44444444332 33333444445555555555432 33333444555555555555443 332222222 2344555
Q ss_pred EEec
Q 003780 365 LDLS 368 (796)
Q Consensus 365 L~l~ 368 (796)
+++.
T Consensus 371 i~lp 374 (394)
T 4fs7_A 371 VELP 374 (394)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5443
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=5e-15 Score=160.18 Aligned_cols=110 Identities=19% Similarity=0.189 Sum_probs=46.4
Q ss_pred CCccEEEcccccccCcchhhh-----cCCCCccccccCCcccccc----CCCcccccCccceEEecccccccc----CCc
Q 003780 193 NNLLILSLDSNKLSGMLHQEL-----GKLKNLVALNVGGNKLMGP----IPSTLFRLTNLTYLYLHSNHLNGS----IPP 259 (796)
Q Consensus 193 ~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~p~ 259 (796)
++|++|+|++|.|+......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 345555555555543332222 1234455555555544321 122233444555555555554421 122
Q ss_pred cccCCcccceeeccccccccc----CccccccccccccccccCcccc
Q 003780 260 EIGNMTGILKVDMSMNNIEGT----IPLELTRLSQLLYLSISSNMLS 302 (796)
Q Consensus 260 ~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~ 302 (796)
.+...++|+.|+|++|.|++. ++..+...++|++|+|++|.|+
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 333344445555555544432 1222233344444444444444
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.38 E-value=5.9e-12 Score=137.85 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=190.8
Q ss_pred CCeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCc-------------------
Q 003780 72 RSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN------------------- 132 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~------------------- 132 (796)
..+++++++.+ ++ .|....|.++++|+.++|..+ +..+...+|.++.+|+.+.+..+-
T Consensus 71 ~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPST-VR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCCC-cc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccC
Confidence 46889999754 43 577788999999999999765 665667788888888887765431
Q ss_pred --CCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccc-----
Q 003780 133 --LTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKL----- 205 (796)
Q Consensus 133 --l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----- 205 (796)
+......+|.++++|+.+.+.++. ..+....|.++++|+.+++..| ++.+...+|.++..|+.+.+..+..
T Consensus 148 ~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~ 225 (394)
T 4fs7_A 148 EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDF 225 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTT
T ss_pred ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehh
Confidence 111223568888999999997664 4366678889999999999876 5545566777777777776655432
Q ss_pred ----------------cCcchhhhcCCCCccccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccce
Q 003780 206 ----------------SGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILK 269 (796)
Q Consensus 206 ----------------~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 269 (796)
+.+....|.++.+|+.+.+..+... +....|.....++.+.+..+.+ ....|....+|+.
T Consensus 226 ~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~ 301 (394)
T 4fs7_A 226 ALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTE 301 (394)
T ss_dssp TTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCE
T ss_pred hcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccc
Confidence 1222334555566666666555333 4445566666666666655432 2346778888999
Q ss_pred eecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecc
Q 003780 270 VDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNN 347 (796)
Q Consensus 270 L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 347 (796)
+.+..+ ++.....+|.++++|+.++|..+ ++.+...+|.++.+|+.+++..| ++.+...+|.++++|+.+++..+
T Consensus 302 i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 302 VKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp EEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 988765 66666778999999999999755 77677889999999999999887 77677889999999999999865
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=4.2e-15 Score=160.75 Aligned_cols=166 Identities=18% Similarity=0.153 Sum_probs=103.5
Q ss_pred CCCcEeecccCcCCCCCCCCCCC-----CCCCCEEEecCCCCCCCCchhh-hccCccceeeccccccCCCCCccc-----
Q 003780 121 SKLRYLDFSFNNLTGSIPPELGS-----LRNLEVLNLKGNNLNGAIPSSL-CQLTKLITMALSRNGLHGPIPSAI----- 189 (796)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 189 (796)
++|++|+|++|.|+......|.. .++|++|+|++|.++......+ ..+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45666777776665332222222 2567777777777654333332 245667777777777764333333
Q ss_pred cCCCCccEEEcccccccCc----chhhhcCCCCccccccCCcccccc----CCCcccccCccceEEecccccccc----C
Q 003780 190 GDLNNLLILSLDSNKLSGM----LHQELGKLKNLVALNVGGNKLMGP----IPSTLFRLTNLTYLYLHSNHLNGS----I 257 (796)
Q Consensus 190 ~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~ 257 (796)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...++|++|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2346788888888877643 334456677788888888887642 244566677888888888888753 2
Q ss_pred CccccCCcccceeecccccccccCccccc
Q 003780 258 PPEIGNMTGILKVDMSMNNIEGTIPLELT 286 (796)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 286 (796)
+..+...++|+.|+|++|.|++.....+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 33445567888888888888765444443
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=9.7e-13 Score=141.53 Aligned_cols=102 Identities=22% Similarity=0.174 Sum_probs=62.3
Q ss_pred EeccCC-cccccCCcCccCCCCCcEeeccc-CcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccceeecccc
Q 003780 102 LSLRFN-YLFGSIPSQVGALSKLRYLDFSF-NNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRN 179 (796)
Q Consensus 102 L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (796)
++++++ ++++ +|. +..+++|++|+|++ |.|++..+..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 456665 5653 444 66666666666664 6666555556666666666666666666666666666666666666666
Q ss_pred ccCCCCCccccCCCCccEEEccccccc
Q 003780 180 GLHGPIPSAIGDLNNLLILSLDSNKLS 206 (796)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 206 (796)
+|++..+..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66655555555444 666666666554
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2e-12 Score=139.06 Aligned_cols=109 Identities=24% Similarity=0.222 Sum_probs=90.7
Q ss_pred ccCCceeeCCCCCeEEEeCCCCCccccccccccCCCCCCcEEeccC-CcccccCCcCccCCCCCcEeecccCcCCCCCCC
Q 003780 61 CKLDGVTCNTARSIIEINLPEKKLKGELSQFNFSCFPGLESLSLRF-NYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPP 139 (796)
Q Consensus 61 C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 139 (796)
|.|.+|.|+... +|++ ++. |..+++|+.|+|++ |.|.++.+..|+++++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~n----------~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRDG----------ALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSSC----------CCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCCC----------CCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 778777775421 3443 444 78888999999996 999988888999999999999999999988888
Q ss_pred CCCCCCCCCEEEecCCCCCCCCchhhhccCccceeeccccccCC
Q 003780 140 ELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLHG 183 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 183 (796)
.|.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.+..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 899999999999999999977777777666 9999999999874
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=3.8e-11 Score=131.42 Aligned_cols=111 Identities=14% Similarity=0.212 Sum_probs=70.9
Q ss_pred CccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecccccccccCCCcccCCCC
Q 003780 258 PPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCS 337 (796)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 337 (796)
..+|.+...|+.+.+..+..+ .....|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345666677777777655433 455667777777777775 3455455667777777777777654 5545566777777
Q ss_pred CCcEEEeecccccCCCCccc-cccccceEEeccccc
Q 003780 338 ELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKL 372 (796)
Q Consensus 338 ~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l 372 (796)
+|+.+.|..+ ++..-...| ++.+|+.+++.+|..
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7777777544 543333344 466777777777654
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=1e-10 Score=127.98 Aligned_cols=271 Identities=9% Similarity=0.099 Sum_probs=127.3
Q ss_pred ccccccCCCC-CCcEEeccCCcccccCCcCccCCCCCcEeecccCc---CCCCCCCCCCCCCCCCEEEecCCCCCCCCch
Q 003780 88 LSQFNFSCFP-GLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNN---LTGSIPPELGSLRNLEVLNLKGNNLNGAIPS 163 (796)
Q Consensus 88 ~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 163 (796)
|....|.+.. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-..+|.++.+|+.+.+..+ ++.+...
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 4444555553 4666666543 555556666666666666666553 44344455666666666665543 3334445
Q ss_pred hhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCccccccCCCcccccCcc
Q 003780 164 SLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGPIPSTLFRLTNL 243 (796)
Q Consensus 164 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L 243 (796)
+|.++.+|+.+.+..+ +..+....|.++.+|+.+.+..+ ++.+....|.+ .+|+.+.+..+-.. ....+|.+..+|
T Consensus 132 aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l 207 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFAL 207 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTC
T ss_pred hhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccc
Confidence 5666666666666533 33344455666666666666543 33343444433 34555555443221 333344444444
Q ss_pred ceEEeccccccccCCcccc--------------CCcccceeecccccccccCccccccccccccccccCccccCcccccc
Q 003780 244 TYLYLHSNHLNGSIPPEIG--------------NMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITI 309 (796)
Q Consensus 244 ~~L~L~~N~l~~~~p~~~~--------------~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~ 309 (796)
+......+... .+...+. ....+..+.+. +.++.....+|.++.+|+.+.+..+..+ +....|
T Consensus 208 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF 284 (394)
T 4gt6_A 208 STITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAF 284 (394)
T ss_dssp CEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTT
T ss_pred ceecccccccc-cccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCccc
Confidence 44444433322 1111100 01111122221 1222233344555555555555443322 334445
Q ss_pred ccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecc
Q 003780 310 AGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSH 369 (796)
Q Consensus 310 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~ 369 (796)
.++.+|+.+.+. +.++......|.++.+|+.+.|..+ ++..-...| ++.+|+.+.+..
T Consensus 285 ~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 285 MNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp TTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECT
T ss_pred ccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECc
Confidence 555555555553 2343344445555555555555433 332222233 345555555543
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=8.3e-11 Score=120.96 Aligned_cols=147 Identities=15% Similarity=0.070 Sum_probs=114.3
Q ss_pred HHHHhcCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecce
Q 003780 494 IIKATEDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKC 572 (796)
Q Consensus 494 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 572 (796)
+....+.|++....+.|+.+.||++... ++.+++|+........ ...+.+|+++++.+. +..+.++++++...+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 3445567888888999999999999864 6889999987532111 135888999999885 6778899999999899
Q ss_pred eeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc--------------------------------
Q 003780 573 MFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD-------------------------------- 620 (796)
Q Consensus 573 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------- 620 (796)
.++||||++|.++.+.+.. ......++.+++++++.||+.
T Consensus 85 ~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999999766321 112346788999999999981
Q ss_pred ------------------------CCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 621 ------------------------CMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 621 ------------------------~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
.++.++|+|++|.||+++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876556799998775
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.08 E-value=4.4e-11 Score=128.12 Aligned_cols=140 Identities=16% Similarity=0.147 Sum_probs=68.4
Q ss_pred CchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhc--CCCCccccccCC--cccccc----
Q 003780 161 IPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELG--KLKNLVALNVGG--NKLMGP---- 232 (796)
Q Consensus 161 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~--N~l~~~---- 232 (796)
++..+..+++|+.|+|++|.-.. ++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 33445555666666666552111 122 22 56677777766666543333333 566666666642 111111
Q ss_pred -CCCcc--cccCccceEEeccccccccCCcccc---CCcccceeeccccccccc----CccccccccccccccccCcccc
Q 003780 233 -IPSTL--FRLTNLTYLYLHSNHLNGSIPPEIG---NMTGILKVDMSMNNIEGT----IPLELTRLSQLLYLSISSNMLS 302 (796)
Q Consensus 233 -~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~ 302 (796)
+...+ ..+++|++|+|.+|.+++..+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 00011 2356677777776666543222221 355666666666666542 2223344555555555555554
Q ss_pred C
Q 003780 303 G 303 (796)
Q Consensus 303 ~ 303 (796)
.
T Consensus 321 d 321 (362)
T 2ra8_A 321 D 321 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=3.4e-10 Score=116.14 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=101.3
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCc--eeeEEeEEEecceeeEE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLYGFCLHKKCMFLI 576 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lV 576 (796)
.++.+....+.|..+.||++...+|+.+++|...... ...+.+|+++++.+++.+ +.+++++...++..++|
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 3455443334566799999988778889999976541 235778999999886444 45688888888889999
Q ss_pred EeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 003780 577 YKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC----------------------------------- 621 (796)
Q Consensus 577 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 621 (796)
|||++|.++. ... .+ ...++.++++.|..||+..
T Consensus 94 ~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 211 11 2356777888888888641
Q ss_pred --------------------CCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 622 --------------------MPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 622 --------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++.++|+|++|.||+++++..+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776667999998753
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.03 E-value=6.3e-11 Score=126.91 Aligned_cols=102 Identities=20% Similarity=0.179 Sum_probs=57.9
Q ss_pred CCeEEEeCCCCCccc-cc----c--ccccCCCCCCcEEeccCCccc---------ccCCcCccCCCCCcEeecccCc-CC
Q 003780 72 RSIIEINLPEKKLKG-EL----S--QFNFSCFPGLESLSLRFNYLF---------GSIPSQVGALSKLRYLDFSFNN-LT 134 (796)
Q Consensus 72 ~~v~~l~l~~~~l~~-~~----~--~~~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~Ls~n~-l~ 134 (796)
.+|+.|.+...+..| .. . ......+++|+.|.+..+... +.+...+..+++|+.|+|++|. +.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 457777777555442 11 0 112445778888887654321 1233445566778888887763 22
Q ss_pred CCCCCCCCCCCCCCEEEecCCCCCCCCchhhh--ccCccceeecc
Q 003780 135 GSIPPELGSLRNLEVLNLKGNNLNGAIPSSLC--QLTKLITMALS 177 (796)
Q Consensus 135 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~ 177 (796)
++. +. +++|++|+|..|.++......+. .+++|+.|+|+
T Consensus 187 --l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 187 --IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp --CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred --ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 222 33 67777777777776543333343 56777777764
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.01 E-value=1.6e-12 Score=131.97 Aligned_cols=23 Identities=9% Similarity=-0.125 Sum_probs=15.4
Q ss_pred CCccCCceeeCCCC-CeEEEeCCC
Q 003780 59 DHCKLDGVTCNTAR-SIIEINLPE 81 (796)
Q Consensus 59 ~~C~w~gv~C~~~~-~v~~l~l~~ 81 (796)
..|+|.|+.|+..+ +|+.+..++
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHHhcCcEEECCCCCEEEEEEecC
Confidence 35899999998653 555554433
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.89 E-value=2.3e-08 Score=108.62 Aligned_cols=284 Identities=11% Similarity=0.074 Sum_probs=182.7
Q ss_pred CeEEEeCCCCCccccccccccCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEe
Q 003780 73 SIIEINLPEKKLKGELSQFNFSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNL 152 (796)
Q Consensus 73 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 152 (796)
+++++.++.. ++ .|....|.++.+|+.++|..+ +..+...+|.++ +|+.+.+..+ ++.+...+|.+ .+|+.+++
T Consensus 47 ~i~~v~ip~~-vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 47 RISEVRVNSG-IT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GCSEEEECTT-EE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred CCEEEEeCCC-cc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 4566666542 22 466667888888888888654 666667788876 6777777643 55444556665 47888888
Q ss_pred cCCCCCCCCchhhhccCccceeeccccccCCCCCccccCCCCccEEEcccccccCc------------chhhhcCCCCcc
Q 003780 153 KGNNLNGAIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGM------------LHQELGKLKNLV 220 (796)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~~~~~~~l~~L~ 220 (796)
..+ +.......|.+. +|+.+.+..+ ++......|..+.+|+.+.+..+..... ....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 765 332334455443 5666655543 4445566777788888887766543321 112233344444
Q ss_pred ccccCCccccccCCCcccccCccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCcc
Q 003780 221 ALNVGGNKLMGPIPSTLFRLTNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNM 300 (796)
Q Consensus 221 ~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~ 300 (796)
.+.+..+. .......+....+|+.+.+..+ ++......|.+...|+.+.+..+ ++.....+|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 44444322 2234456666777888877655 34355567777888888888765 55566677888888888888654
Q ss_pred ccCccccccccccccceecccccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEeccc
Q 003780 301 LSGQIPITIAGLISLKGLDLSNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHN 370 (796)
Q Consensus 301 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N 370 (796)
+.......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++..-...| ++.+|+.+.+..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 55455667888888888888888887777788888888888888654 553333444 4677887777554
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.89 E-value=4e-09 Score=113.70 Aligned_cols=143 Identities=17% Similarity=0.246 Sum_probs=106.3
Q ss_pred cceeeecccceeEEEEEccCCcEEEEEEec--cccchhhHHHHHHHHHHHHHhhcC--CCceeeEEeEEEec---ceeeE
Q 003780 503 IKYCIGTGGYGSVYKAQLPNGKVVALKKLH--RAETEETTFFNSFQNEAHVLSKIA--HRNIVKLYGFCLHK---KCMFL 575 (796)
Q Consensus 503 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~---~~~~l 575 (796)
..+.++.|.++.||++...+ ..+++|+.. ...... ....+.+|+++++.+. +..+.+++.++.+. +..++
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~--~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLP--SAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCC--cHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 35678999999999998764 678888776 332111 1246788999999987 45678899988776 45899
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC---------------------------------- 621 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 621 (796)
||||++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 119 vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 99999998774311 112677888899999999999999731
Q ss_pred ---------------------CCCeEEecCCCCCeEecCCCc--EEEeeeccccc
Q 003780 622 ---------------------MPSIVHRDISSNNILLNSKLE--AFVADFGTARL 653 (796)
Q Consensus 622 ---------------------~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~ 653 (796)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997753 58999998864
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=2.9e-09 Score=111.91 Aligned_cols=185 Identities=22% Similarity=0.207 Sum_probs=121.8
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCc--eeeEEeEEEecc---eeeEEE
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRN--IVKLYGFCLHKK---CMFLIY 577 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lV~ 577 (796)
.+.++.|....||++. +.+++|+.... .....+.+|+++++.+. +.. +.+++.+....+ ..++||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4568999999999873 56888886433 12357889999998884 322 345555443333 458899
Q ss_pred eeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc-------------------------------------
Q 003780 578 KYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD------------------------------------- 620 (796)
Q Consensus 578 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------- 620 (796)
++++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988653321 256677778888888888888861
Q ss_pred ------------------CCCCeEEecCCCCCeEecC--CCcEEEeeeccccccCCCCCCccc---------------cc
Q 003780 621 ------------------CMPSIVHRDISSNNILLNS--KLEAFVADFGTARLLDSDSSNRTI---------------VA 665 (796)
Q Consensus 621 ------------------~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~---------------~~ 665 (796)
..+.++|+|++|.||++++ ...+.|+||+.+..-.+. ..... ..
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHH
Confidence 1235899999999999998 455789999998753221 00000 00
Q ss_pred cccCccC-ccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 666 GTYGYIA-PELAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 666 gt~~y~a-PE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
..+++.. |+.... .....+.|++|.++|.+.+|+.+|.
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1111122 222111 1223689999999999999998854
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.81 E-value=5.4e-08 Score=105.64 Aligned_cols=272 Identities=11% Similarity=0.034 Sum_probs=194.1
Q ss_pred cCCCCCCcEEeccCCcccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCCCCCCCchhhhccCccc
Q 003780 93 FSCFPGLESLSLRFNYLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNNLNGAIPSSLCQLTKLI 172 (796)
Q Consensus 93 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 172 (796)
+..-.+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++.+...+|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44556788888864 577777889999999999999754 776667788886 7888888754 55455566655 5899
Q ss_pred eeeccccccCCCCCccccCCCCccEEEcccccccCcchhhhcCCCCccccccCCcccccc------------CCCccccc
Q 003780 173 TMALSRNGLHGPIPSAIGDLNNLLILSLDSNKLSGMLHQELGKLKNLVALNVGGNKLMGP------------IPSTLFRL 240 (796)
Q Consensus 173 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~------------~~~~l~~l 240 (796)
.+.+..+ ++......|.+. +|+.+.+..+ ++.+....|..+.+++.+.+..+..... ....+...
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred cccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 9999765 343445566654 6777766543 5556677888888888887776544311 11123334
Q ss_pred CccceEEeccccccccCCccccCCcccceeecccccccccCccccccccccccccccCccccCccccccccccccceecc
Q 003780 241 TNLTYLYLHSNHLNGSIPPEIGNMTGILKVDMSMNNIEGTIPLELTRLSQLLYLSISSNMLSGQIPITIAGLISLKGLDL 320 (796)
Q Consensus 241 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 320 (796)
..+..+.+..+.-. .....+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++.+....|.+..+|+.+.+
T Consensus 194 ~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 45555555443322 45566777888999888655 45466678889999999999776 66567788999999999999
Q ss_pred cccccccCCCcccCCCCCCcEEEeecccccCCCCccc-cccccceEEecccccCCCCCc
Q 003780 321 SNNKLSGPIPPEIGKCSELRNITLRNNNLSGSIPPEI-GLMKLEYLDLSHNKLNGTIPP 378 (796)
Q Consensus 321 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~p~ 378 (796)
..+ +.......|..+++|+.+.+.++.++..-...| ++.+|+.++|..+ ++ .|+.
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~ 326 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQV 326 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECT
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHH
Confidence 764 655667789999999999999998886555556 5789999999765 43 4443
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=3e-09 Score=107.93 Aligned_cols=79 Identities=25% Similarity=0.332 Sum_probs=45.3
Q ss_pred CCCCCCEEEecCCCCCC--CCchhhhccCccceeeccccccCCCCCccccCCC--CccEEEcccccccCcch-------h
Q 003780 143 SLRNLEVLNLKGNNLNG--AIPSSLCQLTKLITMALSRNGLHGPIPSAIGDLN--NLLILSLDSNKLSGMLH-------Q 211 (796)
Q Consensus 143 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~-------~ 211 (796)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45566666666666655 2345555666666666666666543 2233333 67777777777665333 3
Q ss_pred hhcCCCCccccc
Q 003780 212 ELGKLKNLVALN 223 (796)
Q Consensus 212 ~~~~l~~L~~L~ 223 (796)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 456677777665
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=1e-08 Score=98.97 Aligned_cols=91 Identities=15% Similarity=0.190 Sum_probs=40.7
Q ss_pred CccCCCCCcEeecccC-cCCCC----CCCCCCCCCCCCEEEecCCCCCCCC----chhhhccCccceeeccccccCCC--
Q 003780 116 QVGALSKLRYLDFSFN-NLTGS----IPPELGSLRNLEVLNLKGNNLNGAI----PSSLCQLTKLITMALSRNGLHGP-- 184 (796)
Q Consensus 116 ~~~~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~-- 184 (796)
.+...+.|++|+|++| .|... +...+...++|++|+|++|+|.... ...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444455555555555 44421 1223334455666666666554321 22233334455555555544421
Q ss_pred --CCccccCCCCccEEEc--cccccc
Q 003780 185 --IPSAIGDLNNLLILSL--DSNKLS 206 (796)
Q Consensus 185 --~p~~~~~l~~L~~L~L--~~N~l~ 206 (796)
+...+...++|++|+| ++|.|+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233333444555555 445444
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=1.3e-08 Score=98.14 Aligned_cols=119 Identities=21% Similarity=0.192 Sum_probs=60.0
Q ss_pred CCCCCCCCCEEEecCC-CCCCC----CchhhhccCccceeeccccccCCC----CCccccCCCCccEEEcccccccCcch
Q 003780 140 ELGSLRNLEVLNLKGN-NLNGA----IPSSLCQLTKLITMALSRNGLHGP----IPSAIGDLNNLLILSLDSNKLSGMLH 210 (796)
Q Consensus 140 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~ 210 (796)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+....
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3455677888888877 77642 223334445566666666665421 12233333455555555555543211
Q ss_pred hhhcCCCCccccccCCccccccCCCcccccCccceEEe--cccccccc----CCccccCCcccceeeccccccc
Q 003780 211 QELGKLKNLVALNVGGNKLMGPIPSTLFRLTNLTYLYL--HSNHLNGS----IPPEIGNMTGILKVDMSMNNIE 278 (796)
Q Consensus 211 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 278 (796)
. .+...+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 111 ~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 L--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp H--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred H--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 0 01233444455555555 55555432 1223334456666666666664
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=7.6e-07 Score=94.01 Aligned_cols=137 Identities=20% Similarity=0.165 Sum_probs=99.8
Q ss_pred CCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC----CceeeEEeEEEecceeeE
Q 003780 500 DFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH----RNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 500 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~~~~~~~~~~~l 575 (796)
.+...+.++.|....||++ |+.+++|+...... ...+.+|.++++.+.+ ..+.+++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~-----~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSV-----RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHH-----HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHH-----HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 5666788999999999998 66788887643321 2458899999888865 123455544 56789
Q ss_pred EEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 003780 576 IYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDC---------------------------------- 621 (796)
Q Consensus 576 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 621 (796)
||||++|.++...... .++..++..++.++++.++.||+..
T Consensus 105 vme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999999988633221 1456666777777777777777432
Q ss_pred --------------------------CCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 622 --------------------------MPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 622 --------------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
.+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999999666789999998653
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.31 E-value=4.4e-06 Score=85.73 Aligned_cols=135 Identities=19% Similarity=0.175 Sum_probs=96.6
Q ss_pred eeecccce-eEEEEEcc-CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeEEEeeccC
Q 003780 506 CIGTGGYG-SVYKAQLP-NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFLIYKYMKR 582 (796)
Q Consensus 506 ~lg~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~~~ 582 (796)
.+..|..+ .||+...+ +++.+++|+-.... ...+.+|...++.+. +--+.++++++..++..++|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~------~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV------ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH------HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC------HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 45556555 68998765 56788999765332 346788999998885 33367888999999999999999999
Q ss_pred CcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 003780 583 GSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD------------------------------------------ 620 (796)
Q Consensus 583 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------ 620 (796)
.++.+...... .....++.++++.|..||+.
T Consensus 105 ~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 105 KTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred ccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 98877654321 12334556666666666642
Q ss_pred -------------CCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 621 -------------CMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 621 -------------~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
..+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011379999999999999876667999988753
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.23 E-value=7.1e-06 Score=84.83 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=92.7
Q ss_pred ccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCC---ceeeEEeEEEecceeeEEEe
Q 003780 502 DIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR---NIVKLYGFCLHKKCMFLIYK 578 (796)
Q Consensus 502 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lV~e 578 (796)
...+.|+.|.++.||++...+|+.+++|+....... ....+..|++.++.+++. .+.+++++. ..++|||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~---~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc---hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 346789999999999999888999999986543221 124689999999999864 577887764 4689999
Q ss_pred eccCCcHHH-----------HHhhcCcc------------------cccCHHHHHH--------------------HHHH
Q 003780 579 YMKRGSLFC-----------FLRNDYEA------------------VVLDWTMRVN--------------------IIKC 609 (796)
Q Consensus 579 ~~~~gsL~~-----------~l~~~~~~------------------~~l~~~~~~~--------------------i~~~ 609 (796)
|++++++.. .+|..... -.-+|..... ....
T Consensus 91 ~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~ 170 (288)
T 3d1u_A 91 WVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRL 170 (288)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHH
T ss_pred ecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 999986421 13332110 0013332210 0111
Q ss_pred HHHHHHHHh----hcCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 610 VANALSYLH----HDCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 610 ia~~L~~LH----~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
+-+.++.+. ....+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 171 ~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 171 VEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 122223332 223568999999999999998 45889999 554
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.20 E-value=1e-05 Score=84.64 Aligned_cols=136 Identities=17% Similarity=0.115 Sum_probs=91.9
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCC---ceeeEEeEEE-ecceeeEEEee
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR---NIVKLYGFCL-HKKCMFLIYKY 579 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~-~~~~~~lV~e~ 579 (796)
.+.++.|....||+. |+.+++|+-... .....+.+|+++++.+.+. .+.+++.++. ..+..++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456888999999998 567888874321 1245789999999999742 3556677764 45567899999
Q ss_pred ccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 003780 580 MKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHD--------------------------------------- 620 (796)
Q Consensus 580 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------- 620 (796)
++|.++.+..-. .++...+..++.++++.|+.||+.
T Consensus 95 i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 999888653211 123333444444444444444432
Q ss_pred ------------------CCCCeEEecCCCCCeEecC---CCcE-EEeeeccccc
Q 003780 621 ------------------CMPSIVHRDISSNNILLNS---KLEA-FVADFGTARL 653 (796)
Q Consensus 621 ------------------~~~~ivH~dlkp~NIll~~---~~~~-kl~Dfg~a~~ 653 (796)
..+.++|+|+.|.||+++. ++.+ .|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 4554 7999998864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=2.4e-05 Score=83.80 Aligned_cols=145 Identities=14% Similarity=0.174 Sum_probs=91.7
Q ss_pred CccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCc--eeeEEeEEEec-ceeeEEE
Q 003780 501 FDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN--IVKLYGFCLHK-KCMFLIY 577 (796)
Q Consensus 501 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~-~~~~lV~ 577 (796)
....+.++.|....+|+... +|+.+++|..... ..+..|+.+++.+.... +.++++++... +..++||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 34456789999999999975 5888999987432 14778888888886433 45677777654 6789999
Q ss_pred eeccCCcHHHH------------------HhhcCcc--------------cccCHHHH---------------------H
Q 003780 578 KYMKRGSLFCF------------------LRNDYEA--------------VVLDWTMR---------------------V 604 (796)
Q Consensus 578 e~~~~gsL~~~------------------l~~~~~~--------------~~l~~~~~---------------------~ 604 (796)
||++|.++.+. +|..... ..-.|... .
T Consensus 114 e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~ 193 (362)
T 3ovc_A 114 RRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSA 193 (362)
T ss_dssp ECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99998665321 1211000 00011111 0
Q ss_pred HHHHHHHHHHHHHhhc-CCCCeEEecCCCCCeEecCCCcEEEeeecccccc
Q 003780 605 NIIKCVANALSYLHHD-CMPSIVHRDISSNNILLNSKLEAFVADFGTARLL 654 (796)
Q Consensus 605 ~i~~~ia~~L~~LH~~-~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 654 (796)
.....+...++++... ..+.++|+|+.+.||+++++..+.|+||+.+..-
T Consensus 194 ~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 194 SVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1112222233333221 1146899999999999987777789999988653
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=2.1e-06 Score=80.59 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=47.1
Q ss_pred CCcEeecccCcCCCCCCCCCCCCCCCCEEEecCCC-CCCCCchhhhcc----Cccceeeccccc-cCCCCCccccCCCCc
Q 003780 122 KLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNN-LNGAIPSSLCQL----TKLITMALSRNG-LHGPIPSAIGDLNNL 195 (796)
Q Consensus 122 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 195 (796)
+|++|||+++.|+..--..+.++++|++|+|++|. |+...-..+..+ ++|++|+|++|. |+...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56677777666665444456667777777777774 553333334433 246666666653 553322344556666
Q ss_pred cEEEccccc
Q 003780 196 LILSLDSNK 204 (796)
Q Consensus 196 ~~L~L~~N~ 204 (796)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.89 E-value=1.3e-05 Score=85.85 Aligned_cols=83 Identities=8% Similarity=-0.010 Sum_probs=55.2
Q ss_pred ceee-ecccceeEEEEEcc-------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-C--CceeeEEeEEEec--
Q 003780 504 KYCI-GTGGYGSVYKAQLP-------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-H--RNIVKLYGFCLHK-- 570 (796)
Q Consensus 504 ~~~l-g~G~~g~Vy~~~~~-------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--pniv~l~~~~~~~-- 570 (796)
.+.| +.|....+|+.... +++.+++|+..............+.+|+.+++.+. + -.+.+++.++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998754 26788898765432000000125677888888774 2 3467788887655
Q ss_pred -ceeeEEEeeccCCcHH
Q 003780 571 -KCMFLIYKYMKRGSLF 586 (796)
Q Consensus 571 -~~~~lV~e~~~~gsL~ 586 (796)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4568999999987654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=3.9e-06 Score=78.77 Aligned_cols=83 Identities=11% Similarity=0.094 Sum_probs=53.4
Q ss_pred CCCCEEEecCCCCCCCCchhhhccCccceeeccccc-cCCCCCccccCC----CCccEEEccccc-ccCcchhhhcCCCC
Q 003780 145 RNLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNG-LHGPIPSAIGDL----NNLLILSLDSNK-LSGMLHQELGKLKN 218 (796)
Q Consensus 145 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~ 218 (796)
.+|++|||+++.|+..--..+.++++|+.|+|++|. |+...-..++.+ ++|++|+|++|. ++...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 579999999999886655667777888888888874 553333334443 357777777764 65444444555555
Q ss_pred ccccccCCc
Q 003780 219 LVALNVGGN 227 (796)
Q Consensus 219 L~~L~l~~N 227 (796)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.68 E-value=0.00012 Score=77.62 Aligned_cols=140 Identities=20% Similarity=0.301 Sum_probs=79.4
Q ss_pred eeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-----CCceeeEE-e--EEEecceeeEE
Q 003780 505 YCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-----HRNIVKLY-G--FCLHKKCMFLI 576 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~l~-~--~~~~~~~~~lV 576 (796)
+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+. .|.++... | +....+..++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE-------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH-------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH-------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4466677889999987655 58999887521 12334455544442 34444311 1 12346678999
Q ss_pred EeeccCCcHH--------------HHHhhcCc----c-------cccCHHHH----------------------------
Q 003780 577 YKYMKRGSLF--------------CFLRNDYE----A-------VVLDWTMR---------------------------- 603 (796)
Q Consensus 577 ~e~~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~---------------------------- 603 (796)
++|++|..+. ..+|.... . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986442 11222110 0 01122211
Q ss_pred ---HHHHHHHHHHHHHHhh----------cCCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 604 ---VNIIKCVANALSYLHH----------DCMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 604 ---~~i~~~ia~~L~~LH~----------~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
..+...+.+++++|+. ..++.++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224446667763 124589999999999999888889999999775
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.65 E-value=0.00014 Score=79.05 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=49.8
Q ss_pred ceeeecccceeEEEEEcc-CCcEEEEEEeccccc--hh--hHHHHHHHHHHHHHhhcCC--Cc-eeeEEeEEEecceeeE
Q 003780 504 KYCIGTGGYGSVYKAQLP-NGKVVALKKLHRAET--EE--TTFFNSFQNEAHVLSKIAH--RN-IVKLYGFCLHKKCMFL 575 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~--~~~~~~~~~E~~~l~~l~h--pn-iv~l~~~~~~~~~~~l 575 (796)
.+.+|.|..+.||++... +++.++||....... .. ....+.+..|.++++.+.. |. +.+++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 468899998654321 00 0112456778888887742 33 3355544 3455689
Q ss_pred EEeeccCC
Q 003780 576 IYKYMKRG 583 (796)
Q Consensus 576 V~e~~~~g 583 (796)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.50 E-value=0.00046 Score=71.82 Aligned_cols=138 Identities=19% Similarity=0.181 Sum_probs=91.8
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC---CCceeeEEeEEEecceeeEEEeec
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA---HRNIVKLYGFCLHKKCMFLIYKYM 580 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lV~e~~ 580 (796)
.+.|+.|....+|+... +++.+++|+..... ...+..|++.++.+. ...+.++++++..++..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY------RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc------HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 46789999999999986 46788899875431 346788999888884 356888899888888999999999
Q ss_pred cCCcHH--------H---HHhhcCc--c-----------------cccCHHHHH---HHHH----------------HHH
Q 003780 581 KRGSLF--------C---FLRNDYE--A-----------------VVLDWTMRV---NIIK----------------CVA 611 (796)
Q Consensus 581 ~~gsL~--------~---~l~~~~~--~-----------------~~l~~~~~~---~i~~----------------~ia 611 (796)
++..+. . .+|.... . -.-+|.... ++.. .+.
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 987541 1 2333211 0 012454332 1111 111
Q ss_pred -HHHHHHhh-cCCCCeEEecCCCCCeEecCCCcEEEeeec
Q 003780 612 -NALSYLHH-DCMPSIVHRDISSNNILLNSKLEAFVADFG 649 (796)
Q Consensus 612 -~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 649 (796)
.....|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11223432 2246899999999999999887 8888873
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.45 E-value=3.2e-05 Score=74.04 Aligned_cols=12 Identities=8% Similarity=0.127 Sum_probs=6.0
Q ss_pred CCCCCcEeeccc
Q 003780 119 ALSKLRYLDFSF 130 (796)
Q Consensus 119 ~l~~L~~L~Ls~ 130 (796)
+-+.|++|+|++
T Consensus 39 ~n~~L~~L~L~~ 50 (197)
T 1pgv_A 39 DDTDLKEVNINN 50 (197)
T ss_dssp TCSSCCEEECTT
T ss_pred cCCCccEEECCC
Confidence 334455555554
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.40 E-value=2.3e-05 Score=75.00 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=31.7
Q ss_pred CCCCCCcEEeccCC-cccc----cCCcCccCCCCCcEeecccCcCCCCCCCC----CCCCCCCCEEEecCCCCC
Q 003780 94 SCFPGLESLSLRFN-YLFG----SIPSQVGALSKLRYLDFSFNNLTGSIPPE----LGSLRNLEVLNLKGNNLN 158 (796)
Q Consensus 94 ~~l~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 158 (796)
.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|.|.+..... +..-+.|++|+|++|+|+
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34456666777664 5542 12233444455666666666555322222 223345555555555554
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.39 E-value=0.00083 Score=69.28 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=56.4
Q ss_pred cCCccceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCC---CceeeEEeEEEecceeeE
Q 003780 499 EDFDIKYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAH---RNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 499 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~~~~~~~~~l 575 (796)
......+.+|.|..+.||+.+..||+.|++|+-....... ...|..|++.|+.+.- --+.+++++. ..++
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 3455567899999999999999999999999876543222 2357889998888742 1244555542 3478
Q ss_pred EEeeccCCc
Q 003780 576 IYKYMKRGS 584 (796)
Q Consensus 576 V~e~~~~gs 584 (796)
||||++++.
T Consensus 88 v~e~l~~~~ 96 (288)
T 3f7w_A 88 AMEWVDERP 96 (288)
T ss_dssp EEECCCCCC
T ss_pred EEEeecccC
Confidence 999988764
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.26 E-value=0.0016 Score=71.08 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=47.6
Q ss_pred CCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCcccccc--ccCccCccccccC---CcCcchhHHHHHHHHHH
Q 003780 622 MPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTIVAG--TYGYIAPELAYTM---VVTEKCDVYSFGVVALE 696 (796)
Q Consensus 622 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DVwSlGv~l~e 696 (796)
.+.++|+|++|.||+++.++ +.++||+.+..-.+. .......+ ...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 999999988753211 11111111 1235666554311 11223455677888888
Q ss_pred HHhCC
Q 003780 697 VLMGR 701 (796)
Q Consensus 697 lltg~ 701 (796)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.03 E-value=0.0024 Score=66.89 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=88.1
Q ss_pred ccHHHHHHHhcCCcc-----ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-----CC
Q 003780 489 IAFEDIIKATEDFDI-----KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-----HR 558 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hp 558 (796)
++.+++.....+|.+ .+.|+.|....+|+....+| .+++|....... ...+..|+.+++.+. -|
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-----~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-----KNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-----HHHHHHHHHHHHHHHHCCCCCC
Confidence 455666666666765 23466788889999987655 688898875311 124556777776663 23
Q ss_pred ceeeEE-e--EEEecceeeEEEeeccCCcHHH--------------HHhhcC---ccc------ccCHHHHHH-------
Q 003780 559 NIVKLY-G--FCLHKKCMFLIYKYMKRGSLFC--------------FLRNDY---EAV------VLDWTMRVN------- 605 (796)
Q Consensus 559 niv~l~-~--~~~~~~~~~lV~e~~~~gsL~~--------------~l~~~~---~~~------~l~~~~~~~------- 605 (796)
.++... | +....+..+++++|++|..+.. .+|... ... ...|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 333210 1 1123466789999999864311 122210 000 011222110
Q ss_pred -----HHHHHHHHHHHHhhc----CCCCeEEecCCCCCeEecCCCcEEEeeecccc
Q 003780 606 -----IIKCVANALSYLHHD----CMPSIVHRDISSNNILLNSKLEAFVADFGTAR 652 (796)
Q Consensus 606 -----i~~~ia~~L~~LH~~----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 652 (796)
+...+.+.+++++.. .+.+++|+|+.+.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455566532 23478999999999999987556799998775
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.96 E-value=0.0081 Score=62.93 Aligned_cols=158 Identities=13% Similarity=0.133 Sum_probs=88.4
Q ss_pred ccHHHHHHHhcCCcc-----ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCC--cee
Q 003780 489 IAFEDIIKATEDFDI-----KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHR--NIV 561 (796)
Q Consensus 489 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv 561 (796)
++.+++....+.|.+ ...++ |....||++...+|+.+++|........ ...+..|..+++.+... .+.
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCeec
Confidence 444455444444432 34566 8888999998777888999998644221 23566677777776421 133
Q ss_pred eEEeE-----EEecceeeEEEeeccCCcHH-----H---------HHhhcC------cccccCHHHH----HHH------
Q 003780 562 KLYGF-----CLHKKCMFLIYKYMKRGSLF-----C---------FLRNDY------EAVVLDWTMR----VNI------ 606 (796)
Q Consensus 562 ~l~~~-----~~~~~~~~lV~e~~~~gsL~-----~---------~l~~~~------~~~~l~~~~~----~~i------ 606 (796)
+++.. ....+..++|++|++|..+. . .+|... .....++... ..+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 34332 22355668899999885432 1 122110 0111222111 001
Q ss_pred ---------HHHHHHHHHHHhhc----CCCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 607 ---------IKCVANALSYLHHD----CMPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 607 ---------~~~ia~~L~~LH~~----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
...+.+.++.+... .+..++|+|+++.||+++ + .+.++||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234678999999999999 4 889999988753
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.93 E-value=0.0029 Score=66.69 Aligned_cols=141 Identities=16% Similarity=0.132 Sum_probs=72.8
Q ss_pred eeeeccccee-EEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-C-CceeeEEeEEEecceeeEEEeecc
Q 003780 505 YCIGTGGYGS-VYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-H-RNIVKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 505 ~~lg~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-pniv~l~~~~~~~~~~~lV~e~~~ 581 (796)
+.++.|.... +|+....+|+.+++|....... ..+..|+.+++.+. + -.+.+++.+....+ ++|||++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 3455554443 6777665467787776544321 12345666666663 2 23456666643333 68999997
Q ss_pred CCcHHHHHhhcC---------------------c--ccccCHHHHH-------H-------------HHHHHHHHHHHHh
Q 003780 582 RGSLFCFLRNDY---------------------E--AVVLDWTMRV-------N-------------IIKCVANALSYLH 618 (796)
Q Consensus 582 ~gsL~~~l~~~~---------------------~--~~~l~~~~~~-------~-------------i~~~ia~~L~~LH 618 (796)
+..+.+++.... . ....+..... . ....+.+.++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 766654433210 0 0011111000 0 0011112222221
Q ss_pred ---hcCCCCeEEecCCCCCeEecCC----CcEEEeeeccccc
Q 003780 619 ---HDCMPSIVHRDISSNNILLNSK----LEAFVADFGTARL 653 (796)
Q Consensus 619 ---~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~ 653 (796)
...++.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123478999999999999875 6789999998864
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0021 Score=57.32 Aligned_cols=34 Identities=32% Similarity=0.266 Sum_probs=14.2
Q ss_pred CcEeecccCcCCCCCCCCCCCCCCCCEEEecCCC
Q 003780 123 LRYLDFSFNNLTGSIPPELGSLRNLEVLNLKGNN 156 (796)
Q Consensus 123 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~ 156 (796)
|++|+|++|+|+.+.+..|..+++|++|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4444444444443333334444444444444443
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0023 Score=69.98 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=48.4
Q ss_pred ceeeecccceeEEEEEccC--------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCce-eeEEeEEEecceee
Q 003780 504 KYCIGTGGYGSVYKAQLPN--------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI-VKLYGFCLHKKCMF 574 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~ 574 (796)
.+.|+.|....+|++...+ ++.+++|+...... ...+..|..+++.+...++ .++++.+.. .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-----ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4568888889999998653 57899998844211 1244578888888753333 566665532 2
Q ss_pred EEEeeccCCcH
Q 003780 575 LIYKYMKRGSL 585 (796)
Q Consensus 575 lV~e~~~~gsL 585 (796)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986443
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.69 E-value=0.0032 Score=65.25 Aligned_cols=138 Identities=15% Similarity=0.153 Sum_probs=74.7
Q ss_pred ceeeecccceeEEEEEccCCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCce-eeEEeEEEecceeeEEEeec-c
Q 003780 504 KYCIGTGGYGSVYKAQLPNGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI-VKLYGFCLHKKCMFLIYKYM-K 581 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lV~e~~-~ 581 (796)
.+.|+.|....+|++ +.+++|+....... .-...+|+.+++.+....+ .+++++ .++.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 678999999999999 45888877643211 1123457777776642222 355544 344457899999 6
Q ss_pred CCcHHH------------------HHhhcCcc--cccC-HHHHHHHHH--------------HHHHHH----HHHhh-cC
Q 003780 582 RGSLFC------------------FLRNDYEA--VVLD-WTMRVNIIK--------------CVANAL----SYLHH-DC 621 (796)
Q Consensus 582 ~gsL~~------------------~l~~~~~~--~~l~-~~~~~~i~~--------------~ia~~L----~~LH~-~~ 621 (796)
+.++.. .+|..... ...+ +.....+.. .+.+.+ +.+.. ..
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 554421 11111100 0011 111111110 011111 11111 12
Q ss_pred CCCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 622 MPSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 622 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
++.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5566789999998864
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.64 E-value=0.003 Score=56.24 Aligned_cols=37 Identities=35% Similarity=0.352 Sum_probs=22.4
Q ss_pred CCCEEEecCCCCCCCCchhhhccCccceeeccccccC
Q 003780 146 NLEVLNLKGNNLNGAIPSSLCQLTKLITMALSRNGLH 182 (796)
Q Consensus 146 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 182 (796)
+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666666666666555555666666666666666554
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.63 E-value=0.0042 Score=66.39 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=80.3
Q ss_pred eeeecccceeEEEEEcc--------CCcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceeeE
Q 003780 505 YCIGTGGYGSVYKAQLP--------NGKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMFL 575 (796)
Q Consensus 505 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 575 (796)
+.+..|-...+|++... +++.+++|+...... ....+.+|.++++.+. +.-..++++++.. .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ----GVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C----CHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc----hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 46777888899999865 357899998633211 1235668999888874 3223566666543 28
Q ss_pred EEeeccCCcHHH--------------H---HhhcCc--ccccC--HHHHHHHHHHHHH-------------------HHH
Q 003780 576 IYKYMKRGSLFC--------------F---LRNDYE--AVVLD--WTMRVNIIKCVAN-------------------ALS 615 (796)
Q Consensus 576 V~e~~~~gsL~~--------------~---l~~~~~--~~~l~--~~~~~~i~~~ia~-------------------~L~ 615 (796)
|+||++|.++.. . +|.... ..... +..+.++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999765421 0 122110 01112 3444444433321 223
Q ss_pred HHh----hc-CCCCeEEecCCCCCeEecCC----CcEEEeeeccccc
Q 003780 616 YLH----HD-CMPSIVHRDISSNNILLNSK----LEAFVADFGTARL 653 (796)
Q Consensus 616 ~LH----~~-~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~ 653 (796)
.|. .. .+..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 21 23368999999999999876 6889999988753
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.21 E-value=0.034 Score=53.34 Aligned_cols=102 Identities=19% Similarity=0.069 Sum_probs=66.5
Q ss_pred cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEecCCCcEEEeeeccccccCCCCCCccc
Q 003780 584 SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNNILLNSKLEAFVADFGTARLLDSDSSNRTI 663 (796)
Q Consensus 584 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 663 (796)
+|.++|.... .++++.+++.++.|.+.+|.-.-.+.. . ..+=+.|..|++..+|.+...+ +.+.
T Consensus 34 SL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 8999998654 359999999999999998877622101 1 1233456889999999987753 1110
Q ss_pred cccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 003780 664 VAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHP 703 (796)
Q Consensus 664 ~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p 703 (796)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122467888763 3456788999999999999865555
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.14 E-value=0.014 Score=63.99 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=47.1
Q ss_pred ceeeecccceeEEEEEccC-CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCce-eeEEeEEEecceeeEEEeecc
Q 003780 504 KYCIGTGGYGSVYKAQLPN-GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRNI-VKLYGFCLHKKCMFLIYKYMK 581 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lV~e~~~ 581 (796)
.+.|+.|-...+|++...+ ++.+++|+.......- . ...+|..+++.+...++ .++++++. + ..|+||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---I-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---S-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---c-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4568888889999998765 5788888774432110 1 12578888888864444 46666662 2 25999998
Q ss_pred CCcH
Q 003780 582 RGSL 585 (796)
Q Consensus 582 ~gsL 585 (796)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.08 E-value=0.0061 Score=65.20 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=43.0
Q ss_pred ceeeecccceeEEEEEccC---------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcCCCc-eeeEEeEEEeccee
Q 003780 504 KYCIGTGGYGSVYKAQLPN---------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIAHRN-IVKLYGFCLHKKCM 573 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~~~ 573 (796)
.+.++.|....+|++...+ ++.+++|+....... ......|.++++.+...+ +.++++.. + -
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 3467778888999997653 267888876543211 112356788877775223 34566543 2 3
Q ss_pred eEEEeeccCCcH
Q 003780 574 FLIYKYMKRGSL 585 (796)
Q Consensus 574 ~lV~e~~~~gsL 585 (796)
++||||++|..+
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.05 E-value=0.01 Score=62.54 Aligned_cols=31 Identities=23% Similarity=0.480 Sum_probs=27.5
Q ss_pred CCeEEecCCCCCeEecCCCcEEEeeeccccc
Q 003780 623 PSIVHRDISSNNILLNSKLEAFVADFGTARL 653 (796)
Q Consensus 623 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 653 (796)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.20 E-value=0.044 Score=58.73 Aligned_cols=145 Identities=18% Similarity=0.153 Sum_probs=80.6
Q ss_pred ceeeecccceeEEEEEccC--------CcEEEEEEeccccch-----------hhH----HHHHHHHHHHHHhhcC-CCc
Q 003780 504 KYCIGTGGYGSVYKAQLPN--------GKVVALKKLHRAETE-----------ETT----FFNSFQNEAHVLSKIA-HRN 559 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~-----------~~~----~~~~~~~E~~~l~~l~-hpn 559 (796)
.+.|..|-...+|++..++ ++.|.+++.-..... +.. ..+....|..+++.+. +--
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456668888999998754 367888876443211 000 0112335888888775 333
Q ss_pred eeeEEeEEEecceeeEEEeeccCCcHHH-----------------HHhhcCc--ccccC--HHHHHHHHHHHH-------
Q 003780 560 IVKLYGFCLHKKCMFLIYKYMKRGSLFC-----------------FLRNDYE--AVVLD--WTMRVNIIKCVA------- 611 (796)
Q Consensus 560 iv~l~~~~~~~~~~~lV~e~~~~gsL~~-----------------~l~~~~~--~~~l~--~~~~~~i~~~ia------- 611 (796)
..++++++.. + +|+||+++-+|.. .+|.... ..... +....++..++.
T Consensus 137 ~Pkl~~~~~~-G---~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ-G---RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT-E---EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC-C---eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 4566766642 2 8999998654421 0121110 11122 223333332221
Q ss_pred ---------------HHH----HHHhhc-CCCCeEEecCCCCCeEecCC------CcEEEeeecccc
Q 003780 612 ---------------NAL----SYLHHD-CMPSIVHRDISSNNILLNSK------LEAFVADFGTAR 652 (796)
Q Consensus 612 ---------------~~L----~~LH~~-~~~~ivH~dlkp~NIll~~~------~~~kl~Dfg~a~ 652 (796)
+-+ +++... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 23367899999999999887 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.96 E-value=0.38 Score=51.93 Aligned_cols=74 Identities=11% Similarity=0.051 Sum_probs=46.5
Q ss_pred ceeeecccceeEEEEEccC--------CcEEEEEEeccccchhhHHHHHHHHHHHHHhhcC-CCceeeEEeEEEecceee
Q 003780 504 KYCIGTGGYGSVYKAQLPN--------GKVVALKKLHRAETEETTFFNSFQNEAHVLSKIA-HRNIVKLYGFCLHKKCMF 574 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 574 (796)
.+.+..|-...+|+....+ ++.|++|+....... .-...+|..+++.+. +.-..++++.+ . -+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----FYDSKVELDVFRYLSNINIAPNIIADF--P--EG 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CC
Confidence 3567778888999997653 578999886443211 112356788877774 22234555433 2 26
Q ss_pred EEEeeccCCcH
Q 003780 575 LIYKYMKRGSL 585 (796)
Q Consensus 575 lV~e~~~~gsL 585 (796)
.|+||++|..+
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.30 E-value=0.54 Score=50.45 Aligned_cols=30 Identities=30% Similarity=0.464 Sum_probs=24.7
Q ss_pred CeEEecCCCCCeEe------cCCCcEEEeeeccccc
Q 003780 624 SIVHRDISSNNILL------NSKLEAFVADFGTARL 653 (796)
Q Consensus 624 ~ivH~dlkp~NIll------~~~~~~kl~Dfg~a~~ 653 (796)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4456789999988863
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.40 E-value=1.1 Score=42.78 Aligned_cols=116 Identities=6% Similarity=0.056 Sum_probs=82.2
Q ss_pred CCCceeeEEeEEEecceeeEEEeeccCC-cHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 003780 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRG-SLFCFLRNDYEAVVLDWTMRVNIIKCVANALSYLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 556 ~hpniv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~N 634 (796)
.||+.++. ..-..++.+.+.|+.-+.+ ++.. + ...+...+++++.+|+....+++++ +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888876 5666677777777765432 3332 2 2378889999999999888766655 899999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGEL 706 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~~ 706 (796)
++++.++.+++.--|+...+. |.- .++..=.-.+=+++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~-----------------P~~-----~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD-----------------PLP-----VSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS-----------------CCC-----CCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCCC-----------------CCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999998777654332 221 11222233667888899999999873
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.85 E-value=2.4 Score=40.68 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=80.1
Q ss_pred CCCceeeEEeEEEecceeeEEEeeccCCcHHHHHhhcCcccccCHHHHHHHHHHHHHHHH-HHhhcCCCCeEEecCCCCC
Q 003780 556 AHRNIVKLYGFCLHKKCMFLIYKYMKRGSLFCFLRNDYEAVVLDWTMRVNIIKCVANALS-YLHHDCMPSIVHRDISSNN 634 (796)
Q Consensus 556 ~hpniv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~dlkp~N 634 (796)
.||++ -...-..++.+.+.++.-+++.=+..++ ..+...+++++.+|+.... +++++ +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 58888 4455577788888888765543333333 2678899999999987766 56654 888999999
Q ss_pred eEecCCCcEEEeeeccccccCCCCCCccccccccCccCccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 003780 635 ILLNSKLEAFVADFGTARLLDSDSSNRTIVAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGRHPGE 705 (796)
Q Consensus 635 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwSlGv~l~elltg~~p~~ 705 (796)
++++.++.+++.-.|.-..+ +|.-. ++.-=.-++=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877765433 23221 111112366778888999988877
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.29 E-value=0.42 Score=52.38 Aligned_cols=61 Identities=13% Similarity=0.094 Sum_probs=17.0
Q ss_pred ceeeecccceeEEEEEccC-CcEEEE------EEeccccchhhHHHHHHHHHHHHHhhcCCCceeeEEeEEE
Q 003780 504 KYCIGTGGYGSVYKAQLPN-GKVVAL------KKLHRAETEETTFFNSFQNEAHVLSKIAHRNIVKLYGFCL 568 (796)
Q Consensus 504 ~~~lg~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 568 (796)
.+.+| ||.||+|.+.. ..+||| |..+...... ...+.+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~-e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSE-KRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccc-cccccccccccccccccccccCCCcceEE
Confidence 34565 99999997753 357888 7665433332 22456888999999999999999988775
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=59.65 E-value=3.7 Score=28.03 Aligned_cols=6 Identities=0% Similarity=0.324 Sum_probs=2.2
Q ss_pred eeecch
Q 003780 460 LLNKNE 465 (796)
Q Consensus 460 ~~~~~~ 465 (796)
+++|++
T Consensus 33 ~~RRRr 38 (44)
T 2l2t_A 33 YVRRKS 38 (44)
T ss_dssp HHHTTC
T ss_pred Hhhhhh
Confidence 333333
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.11 E-value=23 Score=29.07 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=6.6
Q ss_pred CccccCCCCccEEEcc
Q 003780 186 PSAIGDLNNLLILSLD 201 (796)
Q Consensus 186 p~~~~~l~~L~~L~L~ 201 (796)
..+|.++.+|+.+.+-
T Consensus 13 ~~aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQ 28 (100)
T ss_dssp SCTTTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcC
Confidence 3344444444444443
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.39 E-value=30 Score=28.36 Aligned_cols=46 Identities=20% Similarity=0.109 Sum_probs=26.3
Q ss_pred cccccCCcCccCCCCCcEeecccCcCCCCCCCCCCCCCCCCEEEecC
Q 003780 108 YLFGSIPSQVGALSKLRYLDFSFNNLTGSIPPELGSLRNLEVLNLKG 154 (796)
Q Consensus 108 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 154 (796)
.++.+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344445556666666666666543 4434455666666666666654
Done!