Query 003781
Match_columns 796
No_of_seqs 380 out of 1859
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 03:49:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 1.5E-66 5.2E-71 572.2 21.2 271 2-293 91-363 (369)
2 2y65_A Kinesin, kinesin heavy 100.0 1.5E-65 5.2E-70 563.8 17.9 261 2-275 96-361 (365)
3 1x88_A Kinesin-like protein KI 100.0 1.7E-65 6E-70 562.7 15.0 248 2-256 100-359 (359)
4 3b6u_A Kinesin-like protein KI 100.0 1.3E-65 4.5E-70 565.0 13.5 255 2-266 113-371 (372)
5 3bfn_A Kinesin-like protein KI 100.0 7.9E-65 2.7E-69 560.8 16.3 260 2-279 110-374 (388)
6 2vvg_A Kinesin-2; motor protei 100.0 1.9E-64 6.4E-69 552.4 19.1 244 2-258 101-346 (350)
7 2wbe_C Bipolar kinesin KRP-130 100.0 6.6E-65 2.3E-69 560.4 15.1 236 14-258 134-372 (373)
8 1t5c_A CENP-E protein, centrom 100.0 7.2E-64 2.5E-68 547.8 19.4 246 2-258 89-339 (349)
9 2owm_A Nckin3-434, related to 100.0 8.8E-64 3E-68 561.8 20.4 255 2-264 148-430 (443)
10 1goj_A Kinesin, kinesin heavy 100.0 1.2E-63 4.2E-68 547.1 17.3 246 2-260 92-343 (355)
11 2zfi_A Kinesin-like protein KI 100.0 1.4E-63 4.9E-68 548.8 17.4 245 2-255 101-362 (366)
12 3lre_A Kinesin-like protein KI 100.0 3E-62 1E-66 536.3 18.2 234 2-247 117-355 (355)
13 2h58_A Kinesin-like protein KI 100.0 1.3E-61 4.4E-66 526.7 20.5 236 2-248 92-329 (330)
14 1bg2_A Kinesin; motor protein, 100.0 4E-62 1.4E-66 529.6 14.4 233 2-247 89-325 (325)
15 3gbj_A KIF13B protein; kinesin 100.0 1.6E-61 5.6E-66 530.3 17.2 236 2-246 104-349 (354)
16 4a14_A Kinesin, kinesin-like p 100.0 2E-61 6.8E-66 528.1 17.6 236 2-245 95-344 (344)
17 1ry6_A Internal kinesin; kines 100.0 2.4E-61 8.3E-66 529.6 16.3 239 2-257 96-341 (360)
18 1f9v_A Kinesin-like protein KA 100.0 7.6E-61 2.6E-65 523.8 18.9 244 2-252 96-346 (347)
19 2rep_A Kinesin-like protein KI 100.0 1.1E-60 3.8E-65 526.8 17.9 238 2-247 127-376 (376)
20 2nr8_A Kinesin-like protein KI 100.0 5.4E-61 1.8E-65 526.5 14.4 240 2-247 115-358 (358)
21 3t0q_A AGR253WP; kinesin, alph 100.0 3E-60 1E-64 519.6 19.7 244 2-251 97-348 (349)
22 3nwn_A Kinesin-like protein KI 100.0 8.6E-61 2.9E-65 525.1 13.5 240 2-247 116-359 (359)
23 4etp_A Kinesin-like protein KA 100.0 1.2E-59 4.1E-64 523.5 19.0 244 2-252 152-402 (403)
24 2heh_A KIF2C protein; kinesin, 100.0 1E-59 3.4E-64 520.0 15.8 231 2-251 146-386 (387)
25 1v8k_A Kinesin-like protein KI 100.0 1.4E-59 4.8E-64 521.8 14.9 232 2-252 166-407 (410)
26 3u06_A Protein claret segregat 100.0 5.4E-59 1.9E-63 518.8 15.7 238 2-255 150-391 (412)
27 3dc4_A Kinesin-like protein NO 100.0 4.4E-58 1.5E-62 501.1 13.6 226 2-252 106-340 (344)
28 4h1g_A Maltose binding protein 100.0 1.4E-56 4.7E-61 531.9 20.4 234 2-248 474-712 (715)
29 2kin_B Kinesin; motor protein, 100.0 4.3E-32 1.5E-36 246.3 4.3 99 173-271 1-100 (100)
30 3kin_B Kinesin heavy chain; mo 100.0 3.4E-29 1.1E-33 234.0 7.5 97 177-273 1-98 (117)
31 2o0a_A S.cerevisiae chromosome 98.1 5.4E-07 1.8E-11 95.1 1.6 189 15-252 103-294 (298)
32 3s84_A Apolipoprotein A-IV; fo 96.9 0.56 1.9E-05 49.5 28.3 69 500-571 48-116 (273)
33 1i84_S Smooth muscle myosin he 96.8 0.0031 1.1E-07 79.1 11.3 38 16-53 431-472 (1184)
34 1i84_S Smooth muscle myosin he 96.7 0.0036 1.2E-07 78.5 10.7 9 48-56 520-528 (1184)
35 3s84_A Apolipoprotein A-IV; fo 96.6 0.96 3.3E-05 47.7 32.9 27 506-532 120-146 (273)
36 2v71_A Nuclear distribution pr 96.0 1.5 5E-05 43.9 24.4 116 310-425 47-166 (189)
37 3na7_A HP0958; flagellar bioge 95.1 3.7 0.00013 42.5 26.7 40 333-372 32-71 (256)
38 2v71_A Nuclear distribution pr 94.6 4.2 0.00014 40.6 24.2 29 338-366 47-75 (189)
39 3oja_B Anopheles plasmodium-re 94.3 1.1 3.7E-05 51.4 18.0 31 221-251 391-421 (597)
40 3vkg_A Dynein heavy chain, cyt 92.7 17 0.00059 50.0 27.4 20 262-281 1900-1919(3245)
41 2dfs_A Myosin-5A; myosin-V, in 92.3 3.7 0.00012 51.1 19.1 38 16-53 405-445 (1080)
42 2a01_A Apolipoprotein A-I; fou 92.1 1.8 6.3E-05 44.6 13.8 20 428-447 103-122 (243)
43 2dfs_A Myosin-5A; myosin-V, in 91.6 6.4 0.00022 49.0 20.2 9 213-221 744-752 (1080)
44 2v66_B Nuclear distribution pr 91.4 8.5 0.00029 35.3 17.2 29 391-419 79-107 (111)
45 2a01_A Apolipoprotein A-I; fou 91.3 2.1 7.3E-05 44.1 13.2 11 671-681 225-235 (243)
46 3vkg_A Dynein heavy chain, cyt 90.7 68 0.0023 44.4 32.5 34 283-316 1887-1928(3245)
47 3o0z_A RHO-associated protein 89.7 16 0.00056 35.7 24.0 21 392-412 107-127 (168)
48 3oja_B Anopheles plasmodium-re 89.4 7.6 0.00026 44.3 17.1 11 266-276 461-471 (597)
49 3ol1_A Vimentin; structural ge 84.1 24 0.00081 32.4 14.1 80 264-366 16-95 (119)
50 3ghg_A Fibrinogen alpha chain; 83.1 23 0.00078 40.3 15.7 37 468-504 107-143 (562)
51 2v66_B Nuclear distribution pr 81.9 31 0.0011 31.6 16.6 22 262-283 4-25 (111)
52 3ghg_A Fibrinogen alpha chain; 80.9 35 0.0012 38.9 16.1 22 392-413 134-155 (562)
53 3r2p_A Apolipoprotein A-I; amp 78.6 52 0.0018 32.1 15.5 24 542-565 110-133 (185)
54 1f5n_A Interferon-induced guan 76.9 1.2E+02 0.004 35.3 23.2 72 589-671 511-582 (592)
55 3i00_A HIP-I, huntingtin-inter 75.0 31 0.0011 31.9 11.6 24 258-281 12-35 (120)
56 2eqb_B RAB guanine nucleotide 71.6 56 0.0019 29.2 12.3 55 303-357 10-64 (97)
57 2lem_A Apolipoprotein A-I; lip 71.5 68 0.0023 32.1 14.3 73 489-564 58-130 (216)
58 2lem_A Apolipoprotein A-I; lip 71.3 2.7 9.2E-05 42.6 3.8 86 505-593 96-182 (216)
59 3u1c_A Tropomyosin alpha-1 cha 65.5 74 0.0025 28.3 15.9 12 346-357 50-61 (101)
60 1deq_A Fibrinogen (alpha chain 63.2 1.5E+02 0.005 32.5 15.3 24 390-413 135-158 (390)
61 3o0z_A RHO-associated protein 62.8 1.2E+02 0.004 29.7 23.8 11 404-414 98-108 (168)
62 2l7b_A Apolipoprotein E, APO-E 61.1 6.6 0.00023 42.0 4.5 16 603-618 241-256 (307)
63 2l7b_A Apolipoprotein E, APO-E 60.3 39 0.0013 36.0 10.3 17 429-445 152-168 (307)
64 1m1j_A Fibrinogen alpha subuni 59.2 1.9E+02 0.0066 32.4 15.5 75 405-494 88-162 (491)
65 2ocy_A RAB guanine nucleotide 59.0 1.3E+02 0.0045 29.0 18.3 79 265-356 17-95 (154)
66 4h22_A Leucine-rich repeat fli 57.9 90 0.0031 28.1 10.5 31 346-376 57-87 (103)
67 4gkw_A Spindle assembly abnorm 57.5 1.3E+02 0.0043 28.3 23.7 10 408-417 103-112 (167)
68 3r2p_A Apolipoprotein A-I; amp 57.1 1.5E+02 0.005 28.9 15.7 20 429-448 83-102 (185)
69 4h22_A Leucine-rich repeat fli 55.4 47 0.0016 29.9 8.2 12 350-361 68-79 (103)
70 2b9c_A Striated-muscle alpha t 55.4 1.4E+02 0.0049 28.3 13.0 63 304-366 51-113 (147)
71 2jee_A YIIU; FTSZ, septum, coi 54.8 1.1E+02 0.0036 26.6 11.6 7 405-411 71-77 (81)
72 3qh9_A Liprin-beta-2; coiled-c 54.4 1.1E+02 0.0036 26.5 10.3 46 335-380 28-73 (81)
73 2efr_A General control protein 53.3 1.6E+02 0.0055 28.3 24.6 33 338-370 26-58 (155)
74 3oja_A Leucine-rich immune mol 53.0 2.6E+02 0.0091 30.7 16.5 8 265-272 325-332 (487)
75 3swk_A Vimentin; cytoskeleton, 50.9 1.2E+02 0.0042 26.2 12.1 59 310-368 19-77 (86)
76 1ic2_A Tropomyosin alpha chain 50.8 1.1E+02 0.0039 25.8 11.1 10 306-315 21-30 (81)
77 1deq_A Fibrinogen (alpha chain 49.1 3E+02 0.01 30.2 17.0 44 405-448 90-133 (390)
78 3tnu_A Keratin, type I cytoske 48.0 1.7E+02 0.0058 27.0 12.6 14 354-367 84-97 (131)
79 2xs1_A Programmed cell death 6 45.6 4.3E+02 0.015 31.0 29.5 39 429-467 606-644 (704)
80 1wt6_A Myotonin-protein kinase 44.4 1.5E+02 0.0053 25.5 10.3 22 337-358 28-49 (81)
81 3iox_A AGI/II, PA; alpha helix 42.4 4.2E+02 0.014 30.0 15.6 18 263-280 11-28 (497)
82 1m1j_C Fibrinogen gamma chain; 42.2 3.6E+02 0.012 29.8 14.6 32 299-330 85-116 (409)
83 3qh9_A Liprin-beta-2; coiled-c 41.9 1.7E+02 0.0058 25.2 9.5 52 319-370 26-77 (81)
84 4hpq_C ATG17, KLTH0D15642P; au 40.4 4.2E+02 0.014 29.3 38.8 23 473-495 199-221 (413)
85 3efg_A Protein SLYX homolog; x 39.9 78 0.0027 27.0 7.0 48 303-350 12-59 (78)
86 1m1j_A Fibrinogen alpha subuni 39.0 4.6E+02 0.016 29.4 15.9 39 466-504 106-144 (491)
87 3bas_A Myosin heavy chain, str 37.8 2E+02 0.0068 24.8 12.5 27 316-342 18-44 (89)
88 3tnu_B Keratin, type II cytosk 37.1 2.5E+02 0.0084 25.7 14.0 15 353-367 81-95 (129)
89 2q12_A DIP13 alpha, DCC-intera 36.9 3.4E+02 0.012 27.3 31.7 83 475-557 162-245 (265)
90 3a7p_A Autophagy protein 16; c 36.6 2.9E+02 0.01 26.5 14.0 13 417-429 121-133 (152)
91 3q8t_A Beclin-1; autophagy, AT 35.5 2.3E+02 0.0078 24.9 14.9 60 297-356 31-90 (96)
92 2e7s_A RAB guanine nucleotide 35.5 1.1E+02 0.0039 28.7 7.9 13 433-445 72-84 (135)
93 3q8t_A Beclin-1; autophagy, AT 32.6 2.6E+02 0.0088 24.6 14.5 26 338-363 23-48 (96)
94 2i1j_A Moesin; FERM, coiled-co 28.9 53 0.0018 38.0 5.4 26 297-322 334-359 (575)
95 2q6q_A Spindle POLE BODY compo 28.8 2.6E+02 0.0087 23.4 7.9 13 317-329 15-27 (74)
96 1wle_A Seryl-tRNA synthetase; 28.1 5.7E+02 0.019 28.9 13.7 33 291-323 70-102 (501)
97 3a7o_A Autophagy protein 16; c 27.1 2.8E+02 0.0096 23.3 8.9 24 306-329 19-42 (75)
98 1tqg_A Chemotaxis protein CHEA 26.4 3.1E+02 0.011 23.5 10.4 56 458-513 3-61 (105)
99 3nvo_A Zinc transport protein 26.2 1.9E+02 0.0066 29.0 8.7 28 471-498 187-214 (264)
100 3ck6_A Putative membrane trans 25.6 3.2E+02 0.011 27.1 10.1 29 471-499 171-199 (252)
101 2q13_A DCC-interacting protein 25.5 6.3E+02 0.021 26.8 31.2 79 474-552 161-240 (385)
102 3iox_A AGI/II, PA; alpha helix 25.5 7.7E+02 0.026 27.9 15.6 18 265-282 6-23 (497)
103 3tnu_B Keratin, type II cytosk 24.3 4.1E+02 0.014 24.2 13.4 56 509-564 55-110 (129)
104 3tnu_A Keratin, type I cytoske 24.1 4.2E+02 0.014 24.2 12.3 56 509-564 57-112 (131)
105 4gkw_A Spindle assembly abnorm 23.9 4.5E+02 0.015 24.6 22.5 19 260-278 10-28 (167)
106 4hpq_C ATG17, KLTH0D15642P; au 23.3 7.8E+02 0.027 27.1 24.2 44 392-435 325-368 (413)
107 3swf_A CGMP-gated cation chann 22.6 3.5E+02 0.012 22.9 8.6 31 303-333 5-35 (74)
108 3ghg_B Fibrinogen beta chain; 22.1 8.7E+02 0.03 27.2 14.1 38 574-611 136-173 (461)
109 1deb_A APC protein, adenomatou 21.8 3E+02 0.01 21.7 6.8 33 329-361 6-38 (54)
110 3kyj_A CHEA3, putative histidi 21.3 5E+02 0.017 24.1 10.6 57 457-513 8-67 (144)
111 3swy_A Cyclic nucleotide-gated 20.7 3E+02 0.01 21.3 7.6 31 303-333 3-33 (46)
112 1x79_B RAB GTPase binding effe 20.4 4.9E+02 0.017 23.7 12.9 7 402-408 97-103 (112)
113 2ocy_A RAB guanine nucleotide 20.3 5.7E+02 0.02 24.5 20.2 18 337-354 17-34 (154)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1.5e-66 Score=572.22 Aligned_cols=271 Identities=38% Similarity=0.575 Sum_probs=239.1
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQH--AEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~~--~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|..|. +.++|||||++.+||+.+.... ..|.|+|||+|||||.|+|||+|.+. .+..+.|++|+.
T Consensus 91 SGKTyTM~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~~l~i~e~~~ 162 (369)
T 3cob_A 91 SGKTFTIYGA-DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA-------KRLKLDIKKDSK 162 (369)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------CCCCCEEEECTT
T ss_pred CCCeEeecCC-CCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCccc-------CCcceEEEECCC
Confidence 4556666665 6789999999999999998754 48999999999999999999987541 245799999999
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|...... ......|+|+|||||||||
T Consensus 163 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---~~~~~~skL~lVDLAGSEr 239 (369)
T 3cob_A 163 GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ---TQAIARGKLSFVDLAGSER 239 (369)
T ss_dssp SCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT---TCCEEEEEEEEEECCCSSC
T ss_pred CCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC---CCcEEEEEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999876543 2345789999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
.+++++.|.|++||.+||+||++||+||.||+++..|||||||||||||||||||||+|+|||||||+..+++||++||+
T Consensus 240 ~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLr 319 (369)
T 3cob_A 240 VKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLT 319 (369)
T ss_dssp CCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCccch
Q 003781 240 YAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRY 293 (796)
Q Consensus 240 fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~el~~~r~k~gv~~~~~~~ 293 (796)
||.|||+|+|+|.+|..+ .||.+||+++..++++.|.+.+.+.|
T Consensus 320 fA~rak~i~~~~~~n~~~----------~ei~~L~~~l~~~~~~~~~~~~~~~~ 363 (369)
T 3cob_A 320 YASRVRSIVNDPSKNVSS----------KEVARLKKLVSYWKEQAGRKGDDEEL 363 (369)
T ss_dssp HHHHHHTCBCCCCCCEEC----------HHHHHHHHHTTCC-----------CC
T ss_pred HHHHHhhcccCCcccCCH----------HHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 999999999999999975 68889999998888888887766554
No 2
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1.5e-65 Score=563.81 Aligned_cols=261 Identities=38% Similarity=0.606 Sum_probs=214.8
Q ss_pred CCCCCCCCCC--CCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEec
Q 003781 2 EGGARKKNGE--FPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED 77 (796)
Q Consensus 2 tG~~~t~~g~--~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed 77 (796)
+|+++|..|. .+..+|||||++++||+.+... +.+|.|+|||+|||||.|+|||++. +.++.+++|
T Consensus 96 SGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~----------~~~l~i~e~ 165 (365)
T 2y65_A 96 SGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS----------KVNLSVHED 165 (365)
T ss_dssp SSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT----------CCSBCEEEC
T ss_pred CCCceEEecCCCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCC----------cCCceEEEC
Confidence 4556665653 3567899999999999999764 4589999999999999999999864 246899999
Q ss_pred CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCC
Q 003781 78 GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 78 ~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGS 157 (796)
+.++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||
T Consensus 166 ~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGS 242 (365)
T 2y65_A 166 KNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN---QKKLSGKLYLVDLAGS 242 (365)
T ss_dssp SSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCC
T ss_pred CCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCC---CCEeEEEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999998765432 2346799999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHH
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETls 236 (796)
||.+++++.|.|++||.+||+||++||+||.||+++ ..||||||||||||||||||||++|+|||||||+..+++||++
T Consensus 243 Er~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~ 322 (365)
T 2y65_A 243 EKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKS 322 (365)
T ss_dssp CC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHH
T ss_pred CcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHH
Confidence 999999999999999999999999999999999997 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccccchHHHHHHHHHHHHHHHH
Q 003781 237 TLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQ 275 (796)
Q Consensus 237 TL~fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~ 275 (796)
||+||.|||+|+|+|.+|.+++...++++|++|+++++.
T Consensus 323 TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~~ 361 (365)
T 2y65_A 323 TLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNAR 361 (365)
T ss_dssp HHHHHHHHTTCEEECCCEEECCSHHHHHC----------
T ss_pred HHHHHHHHhcccCcceeCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888888888877663
No 3
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1.7e-65 Score=562.71 Aligned_cols=248 Identities=62% Similarity=0.911 Sum_probs=210.6
Q ss_pred CCCCCCCCCCCC----------CCCCcHHHHHHHHHHHHhhcCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCC
Q 003781 2 EGGARKKNGEFP----------SDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKP 71 (796)
Q Consensus 2 tG~~~t~~g~~~----------~~~GIIPRal~~LF~~le~~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~ 71 (796)
+|+++|..|... +.+|||||++++||+.+...+.+|.|+|||+|||||.|+|||+|... ....
T Consensus 100 SGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~~ 172 (359)
T 1x88_A 100 TGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSD-------VSER 172 (359)
T ss_dssp SSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTSC-------TTCC
T ss_pred CCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhccCceEEEEEEEEEEeCceeeehhccccc-------cccc
Confidence 455555566432 34799999999999999887889999999999999999999987542 2346
Q ss_pred eeEEecC--CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeee
Q 003781 72 IALMEDG--KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKL 149 (796)
Q Consensus 72 l~i~ed~--~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL 149 (796)
+.+++++ .+|++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|+.......+....+.|+|
T Consensus 173 l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL 252 (359)
T 1x88_A 173 LQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKL 252 (359)
T ss_dssp BEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred ceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCCCceEEEEEE
Confidence 8899987 47999999999999999999999999999999999999999999999999999987766666777789999
Q ss_pred ccccCCCCccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCC
Q 003781 150 NLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIH 229 (796)
Q Consensus 150 ~lVDLAGSEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~ 229 (796)
+|||||||||++++++.|.|++||++||+||++||+||.||+++..||||||||||||||||||||++|+|||||||+..
T Consensus 253 ~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~ 332 (359)
T 1x88_A 253 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASL 332 (359)
T ss_dssp EEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGG
T ss_pred EEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHhHHHHHHHHHHhccCccccccccc
Q 003781 230 CLEETLSTLDYAHRAKNIKNKPEINQK 256 (796)
Q Consensus 230 ~~eETlsTL~fA~RAk~Ikn~p~vN~~ 256 (796)
+++||++||+||.|||+|+|+|.+|++
T Consensus 333 ~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 333 NLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp GHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred cHHHHHHHHHHHHHHhhccCcceeCCC
Confidence 999999999999999999999999973
No 4
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=1.3e-65 Score=565.01 Aligned_cols=255 Identities=45% Similarity=0.725 Sum_probs=213.0
Q ss_pred CCCCCCCCCC--CCCCCCcHHHHHHHHHHHHhhc-CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGE--FPSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~--~~~~~GIIPRal~~LF~~le~~-~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|. .+.++|||||++.+||..+... +.+|.|+|||+|||||+|+|||+|.. .+++.|++++
T Consensus 113 SGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---------~~~l~i~e~~ 183 (372)
T 3b6u_A 113 TGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQ---------TKRLELKERP 183 (372)
T ss_dssp SSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCT---------TCCBCEEEET
T ss_pred CCCCEeEecCCCCcccCCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCC---------CCCceEEECC
Confidence 4566666664 3567899999999999999864 56999999999999999999998653 3468999999
Q ss_pred CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCc
Q 003781 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (796)
Q Consensus 79 ~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSE 158 (796)
.+|++|.||+++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|........+...++.|+|+||||||||
T Consensus 184 ~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSE 263 (372)
T 3b6u_A 184 DTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSE 263 (372)
T ss_dssp TTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCC
T ss_pred CCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999887655555666788999999999999
Q ss_pred cccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCC-CCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHH
Q 003781 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEHS-GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (796)
Q Consensus 159 r~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~-~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsT 237 (796)
|.+++++.|.|++||..||+||++||+||.||+++. .||||||||||||||||||||++|+|||||||+..+++||++|
T Consensus 264 r~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsT 343 (372)
T 3b6u_A 264 RQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTT 343 (372)
T ss_dssp E----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHH
T ss_pred cccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHH
Confidence 999999999999999999999999999999999874 6999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCccccccccccchHHHHHHH
Q 003781 238 LDYAHRAKNIKNKPEINQKMMKSAMIKDL 266 (796)
Q Consensus 238 L~fA~RAk~Ikn~p~vN~~~~~~~lik~l 266 (796)
|+||.|||+|+|+|.+|+++ +..++++|
T Consensus 344 LrfA~rak~I~n~~~~n~~~-~~~~~~~~ 371 (372)
T 3b6u_A 344 LRYANRAKNIKNKPRVNEDP-KDALLREF 371 (372)
T ss_dssp HHHHHHHTTCBCCCCCCC-----------
T ss_pred HHHHHHHhhccccceecCCh-HHHHHHhc
Confidence 99999999999999999985 55677665
No 5
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-65 Score=560.85 Aligned_cols=260 Identities=34% Similarity=0.574 Sum_probs=191.0
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc-----CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEe
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ-----HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALME 76 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~-----~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~e 76 (796)
+|+++|..|. +.++|||||++.+||+.+... +..|.|+|||+|||||.|+|||+|.. .++.|++
T Consensus 110 SGKTyTM~G~-~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~----------~~l~ire 178 (388)
T 3bfn_A 110 AGKTHTMLGS-PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPAS----------GDLVIRE 178 (388)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSS----------CBCCCEE
T ss_pred CCCCeEeecC-ccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCC----------CCceEEE
Confidence 4555555665 678999999999999998752 34899999999999999999998643 4688999
Q ss_pred cCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCC
Q 003781 77 DGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAG 156 (796)
Q Consensus 77 d~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAG 156 (796)
|+.++++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+....... ....|+|+||||||
T Consensus 179 d~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~--~~~~skL~lVDLAG 256 (388)
T 3bfn_A 179 DCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPF--RQREGKLYLIDLAG 256 (388)
T ss_dssp CTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTC--CEEEEEEEEEECCC
T ss_pred cCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCC--ceeEEEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999876544322 24679999999999
Q ss_pred CccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHH
Q 003781 157 SENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236 (796)
Q Consensus 157 SEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETls 236 (796)
|||..++++.|.|++|++.||+||++||+||.||+++.+||||||||||||||||||||++|+|||||||+..+++||++
T Consensus 257 SEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETls 336 (388)
T 3bfn_A 257 SEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVS 336 (388)
T ss_dssp TTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHH
T ss_pred CcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 003781 237 TLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYA 279 (796)
Q Consensus 237 TL~fA~RAk~Ikn~p~vN~~~~~~~lik~l~~EI~~Lk~el~~ 279 (796)
||+||.|||+|+|+|.+|..+....+ .++.+++++|.+
T Consensus 337 TLrfA~rak~I~n~p~~n~~~~~~~l-----~~~k~~~~~l~~ 374 (388)
T 3bfn_A 337 ALNFAARSKEVINRPFTNESLQPHAL-----GPVKLSQKELLG 374 (388)
T ss_dssp HHHHHCSEEEEC-------------------------------
T ss_pred HHHHHHHHhhCcCcCcccCCCCHHHH-----HHHHHHHHHhhC
Confidence 99999999999999999998755433 244455555543
No 6
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.9e-64 Score=552.42 Aligned_cols=244 Identities=48% Similarity=0.714 Sum_probs=199.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|..|. +.++|||||++++||+.+... +..|.|+|||+|||||.|+|||++. +++.+++|+.
T Consensus 101 SGKTyTm~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-----------~~l~i~e~~~ 168 (350)
T 2vvg_A 101 AGKTWTMGGN-KEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNN-----------TKLPLKEDKT 168 (350)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTE-----------EEECEEEETT
T ss_pred CCCCEEeecC-CccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccCC-----------cCceeeEcCC
Confidence 4555555665 688999999999999999843 4589999999999999999999742 3688999999
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
+|++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|...... .+....+.|+|+|||||||||
T Consensus 169 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-~~~~~~~~skl~lVDLAGSEr 247 (350)
T 2vvg_A 169 RGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI-ENKEVIRVGKLNLVDLAGSER 247 (350)
T ss_dssp TEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC-----CEEEEEEEEEEECCCCCC
T ss_pred CCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeecc-CCCccEEEEEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999876544 344566889999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
.+++++.|.|++||..||+||++||+||.||+++..||||||||||||||||||||++|+|||||||+..+++||++||+
T Consensus 248 ~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~ 327 (350)
T 2vvg_A 248 QSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLR 327 (350)
T ss_dssp ---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCccccccccccc
Q 003781 240 YAHRAKNIKNKPEINQKMM 258 (796)
Q Consensus 240 fA~RAk~Ikn~p~vN~~~~ 258 (796)
||.|||+|+|+|.+|+++.
T Consensus 328 fA~rak~i~n~~~~n~~~~ 346 (350)
T 2vvg_A 328 YADRAKQIKNKPRINEDPK 346 (350)
T ss_dssp HHHHHTTCBCCCCCCBSCT
T ss_pred HHHHHhhccccceecCCch
Confidence 9999999999999999863
No 7
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=6.6e-65 Score=560.45 Aligned_cols=236 Identities=60% Similarity=0.948 Sum_probs=203.1
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEec--CCCCeEecccEEEE
Q 003781 14 SDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED--GKGGVFVRGLEEEI 91 (796)
Q Consensus 14 ~~~GIIPRal~~LF~~le~~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed--~~~gv~V~gL~ev~ 91 (796)
.++|||||++++||+.+...+.+|.|+|||+|||||.|+|||++.. ...+.+++| ++++++|.||+++.
T Consensus 134 ~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---------~~~l~i~~~~~~~g~v~v~gl~~~~ 204 (373)
T 2wbe_C 134 SDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTDD---------TTKIRIFDDSTKKGSVIIQGLEEIP 204 (373)
T ss_dssp TTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEESSCTTS---------CSCCCEEECSSSSSCEEETTCCCEE
T ss_pred CCCcChHHHHHHHHHHHHhcCceEEEEEEEEEEeCCeEEECCCCCC---------CCCceeEeccCCCCcEEecCceEEc
Confidence 5789999999999999998888999999999999999999998653 235677777 46789999999999
Q ss_pred ecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCccccCCCCc-hhhH
Q 003781 92 VTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAR-EGRA 170 (796)
Q Consensus 92 V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr~~ks~a~-g~r~ 170 (796)
|.|++|++.+|..|..+|++++|.||..|||||+||+|+|+.......+....+.|+|+|||||||||.+++++. |.|+
T Consensus 205 V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl 284 (373)
T 2wbe_C 205 VHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRV 284 (373)
T ss_dssp ESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------
T ss_pred cCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccch
Confidence 999999999999999999999999999999999999999987765555666778999999999999999999998 9999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHHHHHHhccCccc
Q 003781 171 REAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNK 250 (796)
Q Consensus 171 kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~fA~RAk~Ikn~ 250 (796)
+||.+||+||++||+||.||+++..|||||||||||||||||||||+|+|||||||+..+++||++||+||.|||+|+|+
T Consensus 285 ~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~ 364 (373)
T 2wbe_C 285 RETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNK 364 (373)
T ss_dssp ------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 003781 251 PEINQKMM 258 (796)
Q Consensus 251 p~vN~~~~ 258 (796)
|.+|+..+
T Consensus 365 p~vN~~~s 372 (373)
T 2wbe_C 365 PEVNQKLT 372 (373)
T ss_dssp CCCCEECC
T ss_pred ceeccccC
Confidence 99999764
No 8
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=7.2e-64 Score=547.83 Aligned_cols=246 Identities=41% Similarity=0.657 Sum_probs=215.7
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc-CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGKG 80 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~-~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~~ 80 (796)
+|+++|..|. +.++|||||++++||+.++.. +.+|.|+|||+|||||.|+|||++.. ..+++.|++|+.+
T Consensus 89 SGKTyTM~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------~~~~l~i~ed~~~ 159 (349)
T 1t5c_A 89 SGKTYTMMGS-EDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQ--------KMKPLIIREDVNR 159 (349)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSC--------TTCCEEEEETTTT
T ss_pred CCCCeEEecC-CCCCchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCC--------CCCCceEEECCCC
Confidence 4556666665 678999999999999999865 45899999999999999999998653 2457999999999
Q ss_pred CeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCC--CCcceEEeeeccccCCCCc
Q 003781 81 GVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPE--GEEMIKCGKLNLVDLAGSE 158 (796)
Q Consensus 81 gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~--~~~~i~~skL~lVDLAGSE 158 (796)
|++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|........ .....+.|+|+||||||||
T Consensus 160 ~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSE 239 (349)
T 1t5c_A 160 NVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSE 239 (349)
T ss_dssp EEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGG
T ss_pred CEEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999987654332 1234678999999999999
Q ss_pred cccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCC--CCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHH
Q 003781 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEHS--GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236 (796)
Q Consensus 159 r~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~--~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETls 236 (796)
|.+++++.|.|++||..||+||++||+||.+|+++. .||||||||||||||||||||++|+|||||||+ +++||++
T Consensus 240 r~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETls 317 (349)
T 1t5c_A 240 RAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLT 317 (349)
T ss_dssp GTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHH
T ss_pred cccccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHH
Confidence 999999999999999999999999999999999875 699999999999999999999999999999997 5999999
Q ss_pred HHHHHHHhccCccccccccccc
Q 003781 237 TLDYAHRAKNIKNKPEINQKMM 258 (796)
Q Consensus 237 TL~fA~RAk~Ikn~p~vN~~~~ 258 (796)
||+||.|||+|+|+|.+|.++.
T Consensus 318 TL~fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 318 ALQFASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHHHhhcccCceeccCCC
Confidence 9999999999999999999863
No 9
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=8.8e-64 Score=561.84 Aligned_cols=255 Identities=40% Similarity=0.591 Sum_probs=205.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc-----CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEe
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ-----HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALME 76 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~-----~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~e 76 (796)
+|+++|..|. +.++|||||++++||+.+... +..|.|+|||+|||||.|+|||+|... ...+..+.|++
T Consensus 148 SGKTyTM~G~-~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-----~~~~~~l~ire 221 (443)
T 2owm_A 148 SGKSYTMMGT-PDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVP-----NKPPYYLKVRE 221 (443)
T ss_dssp SSHHHHHTCC-TTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCS-----SCCCCCCEEEE
T ss_pred CCCCEEeecC-CCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCcccc-----CCcccccceeE
Confidence 4666666775 678999999999999999753 468999999999999999999987431 12345799999
Q ss_pred cCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCC-CCCcceEEeeeccccCC
Q 003781 77 DGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTP-EGEEMIKCGKLNLVDLA 155 (796)
Q Consensus 77 d~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~-~~~~~i~~skL~lVDLA 155 (796)
|+.+|++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... .+....+.|+|+|||||
T Consensus 222 ~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLA 301 (443)
T 2owm_A 222 SPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLA 301 (443)
T ss_dssp ETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECC
T ss_pred CCCCCEeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999998754322 22345678999999999
Q ss_pred CCccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCC----------------------CCCCCCCCccccccccccC
Q 003781 156 GSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHS----------------------GHVPYRDSKLTRLLRDSLG 213 (796)
Q Consensus 156 GSEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~----------------------~hIPYRdSKLTrLLqDSLG 213 (796)
||||++++++.|.|++||.+||+||++||+||.||+++. .||||||||||||||||||
T Consensus 302 GSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLg 381 (443)
T 2owm_A 302 GSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLG 381 (443)
T ss_dssp CCCC--------------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTT
T ss_pred CCccccccCCccccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhC
Confidence 999999999999999999999999999999999998753 3899999999999999999
Q ss_pred CCcceeeeeecCCCCCChHhHHHHHHHHHHhccCccccccccccchHHHHH
Q 003781 214 GKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIK 264 (796)
Q Consensus 214 GnskT~mIatVSPs~~~~eETlsTL~fA~RAk~Ikn~p~vN~~~~~~~lik 264 (796)
||++|+|||||||+ +++||++||+||.|||+|+|+|.+|+....+...+
T Consensus 382 GnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~~~~~~ 430 (443)
T 2owm_A 382 GNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGVSAAER 430 (443)
T ss_dssp SSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC--------
T ss_pred CCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhccccceecccCCccHHHH
Confidence 99999999999997 59999999999999999999999999433344333
No 10
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=1.2e-63 Score=547.10 Aligned_cols=246 Identities=46% Similarity=0.700 Sum_probs=225.4
Q ss_pred CCCCCCCCCC---CCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEe
Q 003781 2 EGGARKKNGE---FPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALME 76 (796)
Q Consensus 2 tG~~~t~~g~---~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~e 76 (796)
+|+++|..|. .+.++|||||++++||+.+... +.+|.|+|||+|||||.|+|||+|.. ..+.+++
T Consensus 92 SGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~----------~~l~i~e 161 (355)
T 1goj_A 92 AGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN----------DNLPVHE 161 (355)
T ss_dssp SSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC----------CSCCEEE
T ss_pred CCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCcc----------CCceeEE
Confidence 4566666664 3577999999999999999764 45899999999999999999998643 4688999
Q ss_pred cCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCC
Q 003781 77 DGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAG 156 (796)
Q Consensus 77 d~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAG 156 (796)
++.+|++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... ...+.|+|+||||||
T Consensus 162 ~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAG 238 (355)
T 1goj_A 162 EKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVET---GSAKSGQLFLVDLAG 238 (355)
T ss_dssp ETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTT---TEEEEEEEEEEECCC
T ss_pred cCCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCC---CceeeeEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999998765432 245789999999999
Q ss_pred CccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHH
Q 003781 157 SENISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETL 235 (796)
Q Consensus 157 SEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETl 235 (796)
|||.+++++.|.|++||.+||+||++||+||.||+++ ..|||||||||||||||+||||++|+|||||||+..+++||+
T Consensus 239 SEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl 318 (355)
T 1goj_A 239 SEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETL 318 (355)
T ss_dssp CSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHH
T ss_pred CCcccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHH
Confidence 9999999999999999999999999999999999996 579999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccccchH
Q 003781 236 STLDYAHRAKNIKNKPEINQKMMKS 260 (796)
Q Consensus 236 sTL~fA~RAk~Ikn~p~vN~~~~~~ 260 (796)
+||+||.|||+|+|+|.+|.++...
T Consensus 319 ~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 319 STLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp HHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred HHHHHHHHHhhccCCceeCCCCCHH
Confidence 9999999999999999999987543
No 11
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=1.4e-63 Score=548.81 Aligned_cols=245 Identities=39% Similarity=0.613 Sum_probs=205.7
Q ss_pred CCCCCCCCCCC-CCCCCcHHHHHHHHHHHHhhc---CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEec
Q 003781 2 EGGARKKNGEF-PSDAGVIPRAVKQIFDILEAQ---HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED 77 (796)
Q Consensus 2 tG~~~t~~g~~-~~~~GIIPRal~~LF~~le~~---~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed 77 (796)
+|+++|..|.. +.++|||||++++||+.++.. +..|.|+|||+|||||.|+|||+|.. +..+.|+++
T Consensus 101 SGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~---------~~~l~ire~ 171 (366)
T 2zfi_A 101 AGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKN---------KGNLRVREH 171 (366)
T ss_dssp SSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTT---------CSCBCEEEE
T ss_pred CCCceEeeCCCccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEcccccc---------CCCceEEEc
Confidence 45666666653 467999999999999999764 35899999999999999999998753 346899999
Q ss_pred CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCC-CcceEEeeeccccCCC
Q 003781 78 GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEG-EEMIKCGKLNLVDLAG 156 (796)
Q Consensus 78 ~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~-~~~i~~skL~lVDLAG 156 (796)
+.+|++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+....... ....+.|+|+||||||
T Consensus 172 ~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAG 251 (366)
T 2zfi_A 172 PLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAG 251 (366)
T ss_dssp TTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCC
T ss_pred CCCCEEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999876544332 2345789999999999
Q ss_pred CccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC------------CCCCCCCCCccccccccccCCCcceeeeeec
Q 003781 157 SENISRSGAREGRAREAGEINKSLLTLGRVINALVEH------------SGHVPYRDSKLTRLLRDSLGGKTKTCIIATV 224 (796)
Q Consensus 157 SEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~------------~~hIPYRdSKLTrLLqDSLGGnskT~mIatV 224 (796)
|||.+++++.|.|++||..||+||++||+||.||+++ ..||||||||||||||||||||++|+|||||
T Consensus 252 SEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~i 331 (366)
T 2zfi_A 252 SERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAAL 331 (366)
T ss_dssp GGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEE
T ss_pred CccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEe
Confidence 9999999999999999999999999999999999973 4699999999999999999999999999999
Q ss_pred CCCCCChHhHHHHHHHHHHhccCcccccccc
Q 003781 225 SPSIHCLEETLSTLDYAHRAKNIKNKPEINQ 255 (796)
Q Consensus 225 SPs~~~~eETlsTL~fA~RAk~Ikn~p~vN~ 255 (796)
||+..+++||++||+||.|||+|+|+|.++.
T Consensus 332 sP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 332 SPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp CCBGGGHHHHHHHHHHHHHTC----------
T ss_pred CCCcccHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 9999999999999999999999999999875
No 12
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=3e-62 Score=536.29 Aligned_cols=234 Identities=41% Similarity=0.645 Sum_probs=189.1
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|..|. +.++|||||++.+||..++.. ...|.|+|||+|||||.|+|||++. .++.+++|+.
T Consensus 117 SGKTyTm~G~-~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-----------~~l~ire~~~ 184 (355)
T 3lre_A 117 AGKTHTMLGS-ADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS-----------GPLAVREDTQ 184 (355)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEESSSCC-----------CCBEEEECTT
T ss_pred CCceeeeccC-CCCCCeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEECcCCC-----------CCceeEEcCC
Confidence 3555555664 678999999999999999864 4589999999999999999999753 3689999999
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
+|++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+..........++.|+|+|||||||||
T Consensus 185 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr 264 (355)
T 3lre_A 185 KGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSER 264 (355)
T ss_dssp SCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC
T ss_pred CCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCc
Confidence 99999999999999999999999999999999999999999999999999999877655545556789999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCC---CCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHS---GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~---~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETls 236 (796)
..++++.|.|++||.+||+||++||+||.||+++. .|||||||||||||||||||||+|+|||||||+..+++||++
T Consensus 265 ~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~ 344 (355)
T 3lre_A 265 ASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYN 344 (355)
T ss_dssp -----------------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHH
T ss_pred CcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHH
Confidence 99999999999999999999999999999999853 599999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccC
Q 003781 237 TLDYAHRAKNI 247 (796)
Q Consensus 237 TL~fA~RAk~I 247 (796)
||+||.|||+|
T Consensus 345 TL~fA~rak~I 355 (355)
T 3lre_A 345 TLKYANRAKDI 355 (355)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhccC
Confidence 99999999987
No 13
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-61 Score=526.66 Aligned_cols=236 Identities=43% Similarity=0.653 Sum_probs=206.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecCC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~ 79 (796)
+|+++|..|. +.++|||||++++||+.++.. +.+|.|+|||+|||||.|+|||++.+. .+-.+.+.+|+.
T Consensus 92 SGKTyTm~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~l~i~~~~~~~ 163 (330)
T 2h58_A 92 AGKTYTMEGT-AENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQ-------EKLEIRLCPDGS 163 (330)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSC-------CCCCCEECTTSS
T ss_pred CCCcEEEecC-CCCCcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhccccccc-------ccceEEEeecCC
Confidence 4555556664 678999999999999999864 448999999999999999999986531 123456667899
Q ss_pred CCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCcc
Q 003781 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (796)
Q Consensus 80 ~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr 159 (796)
++++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|...... ......|+|+|||||||||
T Consensus 164 ~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---~~~~~~skL~lVDLAGSEr 240 (330)
T 2h58_A 164 GQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCS---TGLRTTGKLNLVDLAGSER 240 (330)
T ss_dssp CCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETT---TTEEEEEEEEEEECCCCCC
T ss_pred CCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecC---CCcEEEEEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999876533 2345789999999999999
Q ss_pred ccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHH
Q 003781 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (796)
Q Consensus 160 ~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~ 239 (796)
.+++++.|.|++|+..||+||++||+||.||+++..|||||||||||||||+||||++|+|||||||+..+++||++||+
T Consensus 241 ~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~ 320 (330)
T 2h58_A 241 VGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLK 320 (330)
T ss_dssp CC------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCc
Q 003781 240 YAHRAKNIK 248 (796)
Q Consensus 240 fA~RAk~Ik 248 (796)
||.|||+|+
T Consensus 321 fA~rak~i~ 329 (330)
T 2h58_A 321 FAERVRSVE 329 (330)
T ss_dssp HHHHHC---
T ss_pred HHHHHhhCc
Confidence 999999986
No 14
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=4e-62 Score=529.58 Aligned_cols=233 Identities=43% Similarity=0.656 Sum_probs=214.5
Q ss_pred CCCCCCCCCC--CCCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEec
Q 003781 2 EGGARKKNGE--FPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED 77 (796)
Q Consensus 2 tG~~~t~~g~--~~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed 77 (796)
+|+++|..|. .|..+|||||++++||+.+... +.+|.|+|||+|||||+|+|||++. +.++.+++|
T Consensus 89 SGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~----------~~~l~i~e~ 158 (325)
T 1bg2_A 89 SGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS----------KTNLSVHED 158 (325)
T ss_dssp SSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTT----------CCSBCEEEC
T ss_pred CCCceEecccCCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCC----------CCCceEEEC
Confidence 4566666664 3567899999999999999753 5589999999999999999999864 246899999
Q ss_pred CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCC
Q 003781 78 GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 78 ~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGS 157 (796)
+.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||
T Consensus 159 ~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skl~lVDLAGS 235 (325)
T 1bg2_A 159 KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQT---EQKLSGKLYLVDLAGS 235 (325)
T ss_dssp TTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCS
T ss_pred CCCCEEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCC---CcEEEEEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999998765432 2346799999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHH
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsT 237 (796)
||.+++++.|.|++||.+||+||++||+||.||+++..|||||||||||||||||||||+|+|||||||+..+++||++|
T Consensus 236 Er~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~T 315 (325)
T 1bg2_A 236 EKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKST 315 (325)
T ss_dssp CCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHH
T ss_pred CcccccCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 003781 238 LDYAHRAKNI 247 (796)
Q Consensus 238 L~fA~RAk~I 247 (796)
|+||.|||+|
T Consensus 316 L~fa~rak~I 325 (325)
T 1bg2_A 316 LLFGQRAKTI 325 (325)
T ss_dssp HHHHHTSCCC
T ss_pred HHHHHHhccC
Confidence 9999999987
No 15
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=1.6e-61 Score=530.33 Aligned_cols=236 Identities=42% Similarity=0.654 Sum_probs=188.6
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhhc---CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ---HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~~---~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|. +.++|||||++++||+.+... +..|.|+|||+|||||.|+|||+|.+ .++++.+++++
T Consensus 104 SGKTyTm~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------~~~~l~i~e~~ 174 (354)
T 3gbj_A 104 SGKSYTMMGT-ADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKG--------SRQTLKVREHS 174 (354)
T ss_dssp SSHHHHHTBC-SSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC--------------CBCBC---
T ss_pred CCCceEEecC-CCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCC--------CCcceEEEEcC
Confidence 4556666665 678999999999999998642 45899999999999999999998753 24578999999
Q ss_pred CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCC-CCCcceEEeeeccccCCCC
Q 003781 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTP-EGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 79 ~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~-~~~~~i~~skL~lVDLAGS 157 (796)
.+|++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+...+. .+....+.|+|+|||||||
T Consensus 175 ~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGS 254 (354)
T 3gbj_A 175 VLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGS 254 (354)
T ss_dssp ---CCBTTCCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCC
T ss_pred CCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999998654332 2334567899999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC------CCCCCCCCCccccccccccCCCcceeeeeecCCCCCCh
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEH------SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCL 231 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~------~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~ 231 (796)
||..++++.|.|++||..||+||++||+||.||+++ ..|||||||||||||||||||||+|+|||||||+..++
T Consensus 255 Er~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~ 334 (354)
T 3gbj_A 255 ERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNY 334 (354)
T ss_dssp CCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGH
T ss_pred CchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchH
Confidence 999999999999999999999999999999999973 46999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhcc
Q 003781 232 EETLSTLDYAHRAKN 246 (796)
Q Consensus 232 eETlsTL~fA~RAk~ 246 (796)
+||++||+||.||+.
T Consensus 335 ~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 335 DETLSTLRYADRAKH 349 (354)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999999985
No 16
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=2e-61 Score=528.11 Aligned_cols=236 Identities=41% Similarity=0.671 Sum_probs=190.7
Q ss_pred CCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHhhc-CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEE
Q 003781 2 EGGARKKNGEF-----PSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALM 75 (796)
Q Consensus 2 tG~~~t~~g~~-----~~~~GIIPRal~~LF~~le~~-~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ 75 (796)
+|+++|..|.. +.++|||||++++||+.++.. ..+|.|+|||+|||||.|+|||++.+ ..+++.++
T Consensus 95 SGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------~~~~l~i~ 166 (344)
T 4a14_A 95 SGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGT--------ASRDIQLR 166 (344)
T ss_dssp SSHHHHHCC--------CCCCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCC--------CGGGCEEE
T ss_pred CCceEeecccchhhhhhcccCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhcc--------ccccceee
Confidence 45666666653 578999999999999999875 56999999999999999999998643 23579999
Q ss_pred ecCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCC-----CCCcceEEeeec
Q 003781 76 EDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTP-----EGEEMIKCGKLN 150 (796)
Q Consensus 76 ed~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~-----~~~~~i~~skL~ 150 (796)
+|+.++++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... .+......|+|+
T Consensus 167 e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~ 246 (344)
T 4a14_A 167 EDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFH 246 (344)
T ss_dssp ECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEE
T ss_pred eccCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeee
Confidence 999999999999999999999999999999999999999999999999999999998764321 122345789999
Q ss_pred cccCCCCccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC---CCCCCCCCCccccccccccCCCcceeeeeecCCC
Q 003781 151 LVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEH---SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPS 227 (796)
Q Consensus 151 lVDLAGSEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~---~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs 227 (796)
|||||||||..++++.|.|++|+.+||+||++||+||.||+++ ..|||||||||||||||+||||++|+|||||||+
T Consensus 247 lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~ 326 (344)
T 4a14_A 247 FVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPS 326 (344)
T ss_dssp EEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCB
T ss_pred EEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCC
Confidence 9999999999999999999999999999999999999999974 4699999999999999999999999999999999
Q ss_pred CCChHhHHHHHHHHHHhc
Q 003781 228 IHCLEETLSTLDYAHRAK 245 (796)
Q Consensus 228 ~~~~eETlsTL~fA~RAk 245 (796)
..+++||++||+||+|||
T Consensus 327 ~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 327 SSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp GGGHHHHHHHHHHHHHTC
T ss_pred ccchhHHhhhhhhhhhcC
Confidence 999999999999999996
No 17
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=2.4e-61 Score=529.58 Aligned_cols=239 Identities=33% Similarity=0.497 Sum_probs=199.8
Q ss_pred CCCCCCCCCCC----CCCCCcHHHHHHHHHHHHhhc--CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEE
Q 003781 2 EGGARKKNGEF----PSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALM 75 (796)
Q Consensus 2 tG~~~t~~g~~----~~~~GIIPRal~~LF~~le~~--~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ 75 (796)
+|+++|..|.. +.++|||||++.+||..++.. +..|.|+|||+|||||.|+|||++.. .+.++
T Consensus 96 SGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~-----------~~~~~ 164 (360)
T 1ry6_A 96 SGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK-----------MVAAL 164 (360)
T ss_dssp SSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC------------------
T ss_pred CCCCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCCc-----------cceee
Confidence 35555555543 478999999999999999753 45899999999999999999998542 46678
Q ss_pred ecCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCC
Q 003781 76 EDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLA 155 (796)
Q Consensus 76 ed~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLA 155 (796)
+++.++++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.... .....|+|+|||||
T Consensus 165 e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~------~~~~~skL~lVDLA 238 (360)
T 1ry6_A 165 ENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN------KNTSLGKIAFIDLA 238 (360)
T ss_dssp ----CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT------TTEEEEEEEEEECC
T ss_pred EcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc------CCcceeEEEEEECC
Confidence 899999999999999999999999999999999999999999999999999999997532 12467999999999
Q ss_pred CCccccCCCCchh-hHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhH
Q 003781 156 GSENISRSGAREG-RAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEET 234 (796)
Q Consensus 156 GSEr~~ks~a~g~-r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eET 234 (796)
||||..++++.|. +++||.+||+||++||+||.||..+..|||||||||||||||||||||+|+|||||||+..+++||
T Consensus 239 GSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ET 318 (360)
T 1ry6_A 239 GSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQT 318 (360)
T ss_dssp CTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHH
T ss_pred CCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHH
Confidence 9999999998764 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcccccccccc
Q 003781 235 LSTLDYAHRAKNIKNKPEINQKM 257 (796)
Q Consensus 235 lsTL~fA~RAk~Ikn~p~vN~~~ 257 (796)
++||+||.|||+|+|.|..|..+
T Consensus 319 lsTLrfA~rak~i~n~~~~~~~~ 341 (360)
T 1ry6_A 319 LNTLRYSSRVKNKGNSKLEGKPI 341 (360)
T ss_dssp HHHHHHHHHHCC-----------
T ss_pred HHHHHHHHHHhhcccCcccCCCC
Confidence 99999999999999977766543
No 18
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=7.6e-61 Score=523.79 Aligned_cols=244 Identities=34% Similarity=0.483 Sum_probs=197.9
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEec-
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED- 77 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed- 77 (796)
+|+++|..|. ++|||||++++||+.+.. .+.+|.|+|||+|||||+|+|||+|...... .......+.++++
T Consensus 96 SGKTyTM~G~---~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~-~~~~~~~~~i~~~~ 171 (347)
T 1f9v_A 96 SGKTFTMLNP---GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKE-DTSIGLKHEIRHDQ 171 (347)
T ss_dssp SSHHHHHHST---TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC--------------CCCEEEET
T ss_pred CCCcEeccCC---CCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCcccccc-ccccCCceeEEEec
Confidence 3555555553 579999999999999875 3569999999999999999999997642111 1111235667765
Q ss_pred CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCC
Q 003781 78 GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 78 ~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGS 157 (796)
+.++++|.|++++.|.++++++.+|..|..+|++++|.||..|||||+||+|+|....... .....|+|+|||||||
T Consensus 172 ~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGS 248 (347)
T 1f9v_A 172 ETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKT---GAHSYGTLNLVDLAGS 248 (347)
T ss_dssp TTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC-----CCEEEEEEEEEECCCC
T ss_pred CCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCCC---CceeeeEEEEEECCCC
Confidence 5678999999999999999999999999999999999999999999999999998754322 2346799999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCC---CCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhH
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEHS---GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEET 234 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~---~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eET 234 (796)
||++++++.|.|++||..||+||++||+||.||+++. .||||||||||||||||||||++|+|||||||+..+++||
T Consensus 249 Er~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ET 328 (347)
T 1f9v_A 249 ERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINET 328 (347)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHH
T ss_pred ccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHH
Confidence 9999999999999999999999999999999999876 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCccccc
Q 003781 235 LSTLDYAHRAKNIKNKPE 252 (796)
Q Consensus 235 lsTL~fA~RAk~Ikn~p~ 252 (796)
++||+||.||++|+..|+
T Consensus 329 l~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 329 LNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp HHHHHHHHHHCCTTTC--
T ss_pred HHHHHHHHHHhhhccCCC
Confidence 999999999999999874
No 19
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-60 Score=526.79 Aligned_cols=238 Identities=35% Similarity=0.499 Sum_probs=184.6
Q ss_pred CCCCCCCCCCC---CCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEE
Q 003781 2 EGGARKKNGEF---PSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALM 75 (796)
Q Consensus 2 tG~~~t~~g~~---~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ 75 (796)
+|+++|..|.. +..+|||||++.+||+.++. .+..|.|+|||+|||||.|+|||++... ......+.++
T Consensus 127 SGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-----~~~~~~l~ir 201 (376)
T 2rep_A 127 SGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTR-----KGQGGECEIR 201 (376)
T ss_dssp SSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC-------------CCEE
T ss_pred CCCceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccc-----cccCCCceEE
Confidence 45666666643 45789999999999999875 3569999999999999999999987531 1123467788
Q ss_pred ec--CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeecccc
Q 003781 76 ED--GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVD 153 (796)
Q Consensus 76 ed--~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVD 153 (796)
++ +.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|....... .....|+|+|||
T Consensus 202 ~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~---~~~~~skL~lVD 278 (376)
T 2rep_A 202 RAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSR---GLQCGAPLSLVD 278 (376)
T ss_dssp EC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESSS---CCEEEEEEEEEE
T ss_pred eccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCC---CcEEEeEEEEEE
Confidence 87 6889999999999999999999999999999999999999999999999999998765432 345679999999
Q ss_pred CCCCccccCCCCch----hhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCC
Q 003781 154 LAGSENISRSGARE----GRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIH 229 (796)
Q Consensus 154 LAGSEr~~ks~a~g----~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~ 229 (796)
||||||++++++.| .|++||..||+||++||+||.||+++..||||||||||||||||||||++|+|||||||+..
T Consensus 279 LAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~ 358 (376)
T 2rep_A 279 LAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEE 358 (376)
T ss_dssp CCCCC------------------------CHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGG
T ss_pred CCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchh
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHhHHHHHHHHHHhccC
Q 003781 230 CLEETLSTLDYAHRAKNI 247 (796)
Q Consensus 230 ~~eETlsTL~fA~RAk~I 247 (796)
+++||++||+||.|++++
T Consensus 359 ~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 359 NVSESLNSLRFASKVNQC 376 (376)
T ss_dssp GHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 999999999999999863
No 20
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=5.4e-61 Score=526.51 Aligned_cols=240 Identities=36% Similarity=0.583 Sum_probs=193.6
Q ss_pred CCCCCCCCCCCC--CCCCcHHHHHHHHHHHHhhc-CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGEFP--SDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~~~--~~~GIIPRal~~LF~~le~~-~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|... ..+|||||++++||+.++.. +..|.|+|||+|||||.|+|||++.+.. .....++.+++++
T Consensus 115 SGKTyTM~G~~~~~~~~Giipra~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~----~~~~~~l~i~e~~ 190 (358)
T 2nr8_A 115 AGKTYTMMGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYV----GPSVTPMTIVENP 190 (358)
T ss_dssp SSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTS----CTTTSCCEEEEET
T ss_pred CCCceEecccccccccCCcHHHHHHHHHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCcccc----CccCCceEEEECC
Confidence 466666666533 35999999999999999875 4589999999999999999999975421 1234678999998
Q ss_pred CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCc
Q 003781 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (796)
Q Consensus 79 ~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSE 158 (796)
.|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|........+ .....|+|+||||||||
T Consensus 191 -~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~-~~~~~skL~lVDLAGSE 268 (358)
T 2nr8_A 191 -QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSE-EKYITSKINLVDLAGSE 268 (358)
T ss_dssp -TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC--------CCEEEEEEEEECCCCC
T ss_pred -CceEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCCC-CCEEEEEEEEEECCCCC
Confidence 6899999999999999999999999999999999999999999999999999876543332 33467999999999999
Q ss_pred cccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHH
Q 003781 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (796)
Q Consensus 159 r~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsT 237 (796)
|++++++.|.|++|+.+||+||++||+||.||+++ ..|||||||||||||||||||||+|+|||||||+..+++||++|
T Consensus 269 r~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsT 348 (358)
T 2nr8_A 269 RLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSS 348 (358)
T ss_dssp ----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHH
T ss_pred cccccCCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHH
Confidence 99999999999999999999999999999999986 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 003781 238 LDYAHRAKNI 247 (796)
Q Consensus 238 L~fA~RAk~I 247 (796)
|+||+|||+|
T Consensus 349 LrfA~Rak~I 358 (358)
T 2nr8_A 349 LRFASRMKLV 358 (358)
T ss_dssp HHHHTTGGGC
T ss_pred HHHHHHhccC
Confidence 9999999986
No 21
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=3e-60 Score=519.58 Aligned_cols=244 Identities=35% Similarity=0.489 Sum_probs=189.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCccc-ccCCCCCeeEEec
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFV-DDKSKKPIALMED 77 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~-~~~~~~~l~i~ed 77 (796)
+|+++|..|. ++|||||++++||+.+.. .+.+|.|+|||+|||||.|+|||++....... .......+.++++
T Consensus 97 SGKTyTm~g~---~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~ 173 (349)
T 3t0q_A 97 SGKTYTMLNA---GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHD 173 (349)
T ss_dssp SSHHHHHHST---TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---------------CCCEEEE
T ss_pred CCCceEeCCC---CCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhccccccccccccccccccccceeEEe
Confidence 3555555553 569999999999998875 35689999999999999999999875422111 1112345677766
Q ss_pred C-CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCC
Q 003781 78 G-KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAG 156 (796)
Q Consensus 78 ~-~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAG 156 (796)
+ .+|++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|........ ....|+|+||||||
T Consensus 174 ~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~---~~~~~kL~lVDLAG 250 (349)
T 3t0q_A 174 HEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTG---ETSQGKLNLVDLAG 250 (349)
T ss_dssp TTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETTTC---CEEEEEEEEEECCC
T ss_pred cCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCCC---CeeEEEEEEEeCCC
Confidence 4 5689999999999999999999999999999999999999999999999999987654332 24679999999999
Q ss_pred CccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCC---CCCCCCCccccccccccCCCcceeeeeecCCCCCChHh
Q 003781 157 SENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSG---HVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEE 233 (796)
Q Consensus 157 SEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~---hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eE 233 (796)
|||++++++.|.|++||.+||+||++||+||.||+++.. ||||||||||||||||||||++|+|||||||+..+++|
T Consensus 251 SEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~E 330 (349)
T 3t0q_A 251 SERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISE 330 (349)
T ss_dssp CCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHH
T ss_pred CCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHH
Confidence 999999999999999999999999999999999998754 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCcccc
Q 003781 234 TLSTLDYAHRAKNIKNKP 251 (796)
Q Consensus 234 TlsTL~fA~RAk~Ikn~p 251 (796)
|++||+||+|+++|+..|
T Consensus 331 Tl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 331 TLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp HHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHhhhcccCC
Confidence 999999999999998765
No 22
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-61 Score=525.07 Aligned_cols=240 Identities=37% Similarity=0.586 Sum_probs=192.3
Q ss_pred CCCCCCCCCCC--CCCCCcHHHHHHHHHHHHhhc-CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGEF--PSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~~--~~~~GIIPRal~~LF~~le~~-~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|.. +.++|||||++++||+.+... +..|.|+|||+|||||+|+|||++.+.. .+...++.+++++
T Consensus 116 SGKTyTM~G~~~~~~~~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~----~~~~~~~~~~~~~ 191 (359)
T 3nwn_A 116 AGKTYTMMGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYV----GPSVTPMTIVENP 191 (359)
T ss_dssp SSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTS----CTTTSCCEEEEET
T ss_pred CCccEEeCCccCCccchhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEecccccccccccccc----ccccccceEEecC
Confidence 46666666643 456899999999999998765 5689999999999999999999875421 1234467778776
Q ss_pred CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCc
Q 003781 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (796)
Q Consensus 79 ~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSE 158 (796)
.|++|.|++++.|.+++|++.+|..|..+|.+++|.||..|||||+||+|+|........ +.....|+|+||||||||
T Consensus 192 -~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~-~~~~~~skL~lVDLAGSE 269 (359)
T 3nwn_A 192 -QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLS-EEKYITSKINLVDLAGSE 269 (359)
T ss_dssp -TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC--------CCEEEEEEEEECCCCC
T ss_pred -CceEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeeccccc-Ccccccccceeeeccccc
Confidence 479999999999999999999999999999999999999999999999999987654333 334568999999999999
Q ss_pred cccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHH
Q 003781 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (796)
Q Consensus 159 r~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsT 237 (796)
|++++++.|.|++|+.+||+||++||+||.||+++ ..|||||||||||||||||||||+|+|||||||+..+++||++|
T Consensus 270 r~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsT 349 (359)
T 3nwn_A 270 RLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSS 349 (359)
T ss_dssp ----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHH
T ss_pred cccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHH
Confidence 99999999999999999999999999999999975 57999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 003781 238 LDYAHRAKNI 247 (796)
Q Consensus 238 L~fA~RAk~I 247 (796)
|+||+|||+|
T Consensus 350 L~fA~rak~I 359 (359)
T 3nwn_A 350 LRFASRMKLV 359 (359)
T ss_dssp HHHHTTGGGC
T ss_pred HHHHHHHcCC
Confidence 9999999987
No 23
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-59 Score=523.48 Aligned_cols=244 Identities=35% Similarity=0.495 Sum_probs=201.8
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|. ++|||||++++||..+.. .+.+|.|+|||+|||||.|+|||+|.+.... ......++.+++++
T Consensus 152 SGKTyTM~g~---~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~-~~~~~~~~~i~~~~ 227 (403)
T 4etp_A 152 SGKTFTMLNP---GDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKE-DTSIGLKHEIRHDQ 227 (403)
T ss_dssp SSHHHHHHCT---TTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC---------CCSCCCCEEEET
T ss_pred CCCceEeCCC---CCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCcccccc-ccccCcceeeEEeC
Confidence 3555555553 569999999999999875 3569999999999999999999997653211 11123356676664
Q ss_pred -CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCC
Q 003781 79 -KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 79 -~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGS 157 (796)
.++++|.|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|........ ....|+|+|||||||
T Consensus 228 ~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~---~~~~~kL~lVDLAGS 304 (403)
T 4etp_A 228 ETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTG---AHSYGTLNLVDLAGS 304 (403)
T ss_dssp TTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTC---CEEEEEEEEEECCCC
T ss_pred CCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecCCC---CeeEEEEEEEECCCC
Confidence 5779999999999999999999999999999999999999999999999999987654332 346799999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCC---CCCCCCCccccccccccCCCcceeeeeecCCCCCChHhH
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSG---HVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEET 234 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~---hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eET 234 (796)
||++++++.|.|++||.+||+||++||+||.||+++.+ |||||||||||||||||||||+|+|||||||+..+++||
T Consensus 305 Er~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ET 384 (403)
T 4etp_A 305 ERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINET 384 (403)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHH
T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHH
Confidence 99999999999999999999999999999999998754 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCccccc
Q 003781 235 LSTLDYAHRAKNIKNKPE 252 (796)
Q Consensus 235 lsTL~fA~RAk~Ikn~p~ 252 (796)
++||+||+|+++|+..|.
T Consensus 385 l~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 385 LNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHhhcccCCC
Confidence 999999999999999885
No 24
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1e-59 Score=519.99 Aligned_cols=231 Identities=40% Similarity=0.632 Sum_probs=183.2
Q ss_pred CCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCee
Q 003781 2 EGGARKKNGEF-----PSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIA 73 (796)
Q Consensus 2 tG~~~t~~g~~-----~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~ 73 (796)
+|+++|..|.. +..+|||||++.+||..+.. .+..|.|+|||+|||||+|+|||++. ..+.
T Consensus 146 SGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~-----------~~l~ 214 (387)
T 2heh_A 146 SGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK-----------AKLR 214 (387)
T ss_dssp SSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT-----------EECE
T ss_pred CCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC-----------ccce
Confidence 45566666642 45799999999999999864 35689999999999999999999853 3588
Q ss_pred EEecCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeecccc
Q 003781 74 LMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVD 153 (796)
Q Consensus 74 i~ed~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVD 153 (796)
+++|+.++++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.... ...|+|+|||
T Consensus 215 i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~--------~~~skL~lVD 286 (387)
T 2heh_A 215 VLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG--------RMHGKFSLVD 286 (387)
T ss_dssp EEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESSS--------SEEEEEEEEE
T ss_pred EEEcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECC--------eeeeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999997531 2579999999
Q ss_pred CCCCccccCCC-CchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccc-cCCCcceeeeeecCCCCCCh
Q 003781 154 LAGSENISRSG-AREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDS-LGGKTKTCIIATVSPSIHCL 231 (796)
Q Consensus 154 LAGSEr~~ks~-a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDS-LGGnskT~mIatVSPs~~~~ 231 (796)
||||||..+++ +.+.+.+|+..||+||++||+||.||+++..|||||||||||||||| |||||+|+|||||||+..++
T Consensus 287 LAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~ 366 (387)
T 2heh_A 287 LAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSC 366 (387)
T ss_dssp CCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGH
T ss_pred CCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchH
Confidence 99999998886 46678899999999999999999999999999999999999999999 69999999999999999999
Q ss_pred HhHHHHHHHHHHhccCcccc
Q 003781 232 EETLSTLDYAHRAKNIKNKP 251 (796)
Q Consensus 232 eETlsTL~fA~RAk~Ikn~p 251 (796)
+||++||+||.|||+|++..
T Consensus 367 ~ETlsTLrfA~rak~I~~~~ 386 (387)
T 2heh_A 367 EYTLNTLRYADRVKELSPHS 386 (387)
T ss_dssp HHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHhccCcCCC
Confidence 99999999999999998753
No 25
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.4e-59 Score=521.85 Aligned_cols=232 Identities=39% Similarity=0.622 Sum_probs=186.0
Q ss_pred CCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCee
Q 003781 2 EGGARKKNGEF-----PSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIA 73 (796)
Q Consensus 2 tG~~~t~~g~~-----~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~ 73 (796)
+|+++|..|+. +.++|||||++.+||..+.. .+..|.|+|||+|||||.|+|||++. ..+.
T Consensus 166 SGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-----------~~l~ 234 (410)
T 1v8k_A 166 SGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK-----------AKLR 234 (410)
T ss_dssp SSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT-----------EEEE
T ss_pred CCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC-----------CCce
Confidence 45566656642 35789999999999999864 35689999999999999999999853 3689
Q ss_pred EEecCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeecccc
Q 003781 74 LMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVD 153 (796)
Q Consensus 74 i~ed~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVD 153 (796)
|++|+.+|++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|... + ...|+|+|||
T Consensus 235 i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-----~---~~~skL~lVD 306 (410)
T 1v8k_A 235 VLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTK-----G---RLHGKFSLVD 306 (410)
T ss_dssp EEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESS-----S---SEEEEEEEEE
T ss_pred EEECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeC-----C---cceeEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999753 1 2579999999
Q ss_pred CCCCccccCCC-CchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccc-cCCCcceeeeeecCCCCCCh
Q 003781 154 LAGSENISRSG-AREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDS-LGGKTKTCIIATVSPSIHCL 231 (796)
Q Consensus 154 LAGSEr~~ks~-a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDS-LGGnskT~mIatVSPs~~~~ 231 (796)
||||||..+++ +.+.+.+|+.+||+||++||+||.||+.+..|||||||||||||||| |||||+|+|||||||+..++
T Consensus 307 LAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~ 386 (410)
T 1v8k_A 307 LAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSC 386 (410)
T ss_dssp CCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGH
T ss_pred CCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccH
Confidence 99999998886 46678889999999999999999999999999999999999999999 69999999999999999999
Q ss_pred HhHHHHHHHHHHhccCccccc
Q 003781 232 EETLSTLDYAHRAKNIKNKPE 252 (796)
Q Consensus 232 eETlsTL~fA~RAk~Ikn~p~ 252 (796)
+||++||+||.|||+|..+|.
T Consensus 387 ~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 387 EYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp HHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHhccCCCCCC
Confidence 999999999999999999885
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=5.4e-59 Score=518.79 Aligned_cols=238 Identities=37% Similarity=0.586 Sum_probs=196.0
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEecC
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~ 78 (796)
+|+++|..|. +.++|||||++.+||+.+.. .+.+|.|+|||+|||||.|+|||++.. ...++.+.+++
T Consensus 150 SGKTyTM~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------~~~~i~~~~~~ 220 (412)
T 3u06_A 150 SGKTYTMDGV-PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQ--------KDMEIRMAKNN 220 (412)
T ss_dssp SSHHHHHTEE-TTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSC--------CCCCEEECSSC
T ss_pred CCCeeEecCC-CCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCC--------CCceeeeeecC
Confidence 3555555664 77899999999999999875 356999999999999999999997643 22346667889
Q ss_pred CCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCc
Q 003781 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (796)
Q Consensus 79 ~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSE 158 (796)
.++++|.|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|....... .....|+|+||||||||
T Consensus 221 ~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~~kL~lVDLAGSE 297 (412)
T 3u06_A 221 KNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK---QEISVGSINLVDLAGSE 297 (412)
T ss_dssp TTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTT---TEEEEEEEEEEECCCCC
T ss_pred CCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCC---CCEEEEEEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999998765332 23578999999999999
Q ss_pred cccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHH
Q 003781 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTL 238 (796)
Q Consensus 159 r~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL 238 (796)
|.. .+.|++||.+||+||++||+||.||+++..|||||||||||||||||||||+|+|||||||+..+++||++||
T Consensus 298 r~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL 373 (412)
T 3u06_A 298 SPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSL 373 (412)
T ss_dssp C--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHH
T ss_pred cCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHH
Confidence 874 4679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCcccc-cccc
Q 003781 239 DYAHRAKNIKNKP-EINQ 255 (796)
Q Consensus 239 ~fA~RAk~Ikn~p-~vN~ 255 (796)
+||.|+++|+..| +.|.
T Consensus 374 rfA~rv~~i~~~~~~~n~ 391 (412)
T 3u06_A 374 RFAASVNSCKMTKAKRNR 391 (412)
T ss_dssp HHHHHHHHHCC-------
T ss_pred HHHHHHhhcccccccccc
Confidence 9999999998654 3343
No 27
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=4.4e-58 Score=501.06 Aligned_cols=226 Identities=31% Similarity=0.451 Sum_probs=177.8
Q ss_pred CCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHhhc----CCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCe
Q 003781 2 EGGARKKNGEF-----PSDAGVIPRAVKQIFDILEAQ----HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPI 72 (796)
Q Consensus 2 tG~~~t~~g~~-----~~~~GIIPRal~~LF~~le~~----~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l 72 (796)
+|+++|.+|.. +.++|||||++++||+.+... ...|.|+|||+|||||+|+|||++.+..+
T Consensus 106 SGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~---------- 175 (344)
T 3dc4_A 106 TGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMP---------- 175 (344)
T ss_dssp SSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSB----------
T ss_pred CCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCc----------
Confidence 35555555543 467899999999999999754 23699999999999999999998754210
Q ss_pred eEEecCCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccc
Q 003781 73 ALMEDGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLV 152 (796)
Q Consensus 73 ~i~ed~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lV 152 (796)
..+..+.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|... ...|+|+||
T Consensus 176 ------~~~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~---------~~~skl~lV 240 (344)
T 3dc4_A 176 ------MVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK---------THHSRMNIV 240 (344)
T ss_dssp ------CCSSTTTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS---------SCEEEEEEE
T ss_pred ------cccccccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec---------CcEEEEEEE
Confidence 11223568999999999999999999999999999999999999999999999632 146999999
Q ss_pred cCCCCccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChH
Q 003781 153 DLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLE 232 (796)
Q Consensus 153 DLAGSEr~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~e 232 (796)
|||||||++++++.|.|++||.+||+||++||+||.+|+.+..||||||||||||||||||||++|+|||||||+..+++
T Consensus 241 DLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ 320 (344)
T 3dc4_A 241 DLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLS 320 (344)
T ss_dssp ECCCCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHH
T ss_pred ECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCccccc
Q 003781 233 ETLSTLDYAHRAKNIKNKPE 252 (796)
Q Consensus 233 ETlsTL~fA~RAk~Ikn~p~ 252 (796)
||++||+||+||+.....|.
T Consensus 321 ETlsTL~fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 321 ETLSTLRFGTSAKAAALEHH 340 (344)
T ss_dssp HHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHhhcCCCCC
Confidence 99999999999999877664
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=1.4e-56 Score=531.89 Aligned_cols=234 Identities=37% Similarity=0.547 Sum_probs=188.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHhh---cCCeEEEEEEEEEEEcCceeecCCCCCCCcccccCCCCCeeEEe-c
Q 003781 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEA---QHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALME-D 77 (796)
Q Consensus 2 tG~~~t~~g~~~~~~GIIPRal~~LF~~le~---~~~~~sV~vS~lEIYNE~V~DLL~~~~~~~~~~~~~~~~l~i~e-d 77 (796)
+|+++|..| +++|||||++++||+.++. .+..|+|+|||+|||||.|+|||+|... ....+.+++ +
T Consensus 474 sGKT~Tm~g---~~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~-------~~~~~~~~~~~ 543 (715)
T 4h1g_A 474 SGKTFTMSH---PTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKID-------PNTKYEIKHDD 543 (715)
T ss_dssp SSHHHHHHC---TTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCC-------TTCCCCEEEET
T ss_pred CchhhccCC---CCCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCC-------CCCcceeEEec
Confidence 355555555 4679999999999999875 3568999999999999999999987531 223455655 4
Q ss_pred CCCCeEecccEEEEecCHHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCC
Q 003781 78 GKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGS 157 (796)
Q Consensus 78 ~~~gv~V~gL~ev~V~s~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGS 157 (796)
..|+++|.||+++.|.|++|++.+|..|..+|++++|.||.+|||||+||+|+|.+..... ...+.|+|+|||||||
T Consensus 544 ~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~---~~~~~~~l~lvDLAGs 620 (715)
T 4h1g_A 544 IAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLT---KESSYGTLNLIDLAGS 620 (715)
T ss_dssp TTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCC
T ss_pred CCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCC---CCEeEEEEEEEeCCCc
Confidence 5666999999999999999999999999999999999999999999999999998765433 2356799999999999
Q ss_pred ccccCCCCchhhHHHHHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHH
Q 003781 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLS 236 (796)
Q Consensus 158 Er~~ks~a~g~r~kEa~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETls 236 (796)
||++++++.|.|++|+.+||+||++||+||.+|+.+ .+|||||||||||||||||||||+|+|||||||+..+++||++
T Consensus 621 Er~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~ 700 (715)
T 4h1g_A 621 ERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETIN 700 (715)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHH
T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHH
Confidence 999999999999999999999999999999999865 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCc
Q 003781 237 TLDYAHRAKNIK 248 (796)
Q Consensus 237 TL~fA~RAk~Ik 248 (796)
||+||+|||+|+
T Consensus 701 tL~fa~r~~~i~ 712 (715)
T 4h1g_A 701 SLRFATKVNNTR 712 (715)
T ss_dssp HHHHHHHHCC--
T ss_pred HHHHHHHhccce
Confidence 999999999997
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.97 E-value=4.3e-32 Score=246.28 Aligned_cols=99 Identities=47% Similarity=0.637 Sum_probs=93.8
Q ss_pred HHHhhhhHHHHHHHHHHHhhC-CCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHHHHHHhccCcccc
Q 003781 173 AGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKP 251 (796)
Q Consensus 173 a~~INkSLlaLg~VI~aL~~~-~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~fA~RAk~Ikn~p 251 (796)
|++||+||++||+||.+|+++ ..|||||||||||||||+||||++|+|||||||+..+++||++||+||.||+.|+|+|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~ 80 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 80 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcc
Confidence 357999999999999999998 6899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHH
Q 003781 252 EINQKMMKSAMIKDLYSEID 271 (796)
Q Consensus 252 ~vN~~~~~~~lik~l~~EI~ 271 (796)
.+|..+....++++|.+||+
T Consensus 81 ~~n~~~~~~~l~~~~~~e~~ 100 (100)
T 2kin_B 81 SVNLELTAEEWKKKYEKEKE 100 (100)
T ss_dssp CCEEECCHHHHHHHHHHHHC
T ss_pred eeccCCCHHHHHHHHHHhhC
Confidence 99999988889888887763
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=3.4e-29 Score=233.96 Aligned_cols=97 Identities=47% Similarity=0.655 Sum_probs=89.1
Q ss_pred hhhHHHHHHHHHHHhhCC-CCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHHHHHHhccCcccccccc
Q 003781 177 NKSLLTLGRVINALVEHS-GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKPEINQ 255 (796)
Q Consensus 177 NkSLlaLg~VI~aL~~~~-~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~fA~RAk~Ikn~p~vN~ 255 (796)
|+||++||+||.+|+++. +||||||||||+||+|+|||||+|+|||||||+..+++||++||+||.||++|+|+|.+|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 899999999999999984 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHH
Q 003781 256 KMMKSAMIKDLYSEIDRL 273 (796)
Q Consensus 256 ~~~~~~lik~l~~EI~~L 273 (796)
.+....+++.+..+++++
T Consensus 81 ~~~~~~l~~~~~~e~~~~ 98 (117)
T 3kin_B 81 ELTAEEWKKKYEKEKEKN 98 (117)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 987777766665554443
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=98.12 E-value=5.4e-07 Score=95.11 Aligned_cols=189 Identities=10% Similarity=0.143 Sum_probs=115.5
Q ss_pred CCCcHHHHHHHHHHHHhh-cCCeEEEEEEEEEEE-cCceeecCCCCCCCcccccCCCCCeeEEecCCCCeEecccEEEEe
Q 003781 15 DAGVIPRAVKQIFDILEA-QHAEYSMKVTFLELY-NEEISDLLALEETSKFVDDKSKKPIALMEDGKGGVFVRGLEEEIV 92 (796)
Q Consensus 15 ~~GIIPRal~~LF~~le~-~~~~~sV~vS~lEIY-NE~V~DLL~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~ev~V 92 (796)
..|=.||++..+|...+. ....|.+.+||+||| ||.++|||...+. ...+.|+.+..++++|.|++.+.|
T Consensus 103 GsGKT~ral~q~f~~~~~~~~~~Y~~tlq~veLy~Ne~~~DLL~~~~~--------~~k~eIk~~~~g~~iv~~s~~i~V 174 (298)
T 2o0a_A 103 PHGSLRESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSH--------NDKDSIKLKFEKHSISLDSKLVII 174 (298)
T ss_dssp CCHHHHHHHHHHHHSTTSHHHHHEEEEEEEEEEECC-CEEETTSCCC--------------CEEEECSSCEEEESCCEEE
T ss_pred CCCccHHHHHHHHHHhhhhcccceEEEEEEEEEecCCchHHhcCCCCC--------CCcceEEecCCCCEEecccEEEEc
Confidence 345569999999997643 337999999999999 9999999974331 124577777889999999999999
Q ss_pred cC-HHHHHHHHHhchhcccccccccCCCCCCCceEEEEEEEEeecCCCCCcceEEeeeccccCCCCccccCCCCchhhHH
Q 003781 93 TT-ADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAR 171 (796)
Q Consensus 93 ~s-~~e~~~lL~~G~~~R~~asT~~N~~SSRSHsIFtI~v~~~~~~~~~~~~i~~skL~lVDLAGSEr~~ks~a~g~r~k 171 (796)
.+ ++|+..++..+...+ .|. +.-.|..+.+..++...++.+-...--++|+.+....
T Consensus 175 ~~~~edv~~~~~~~~~~~------~~~---~gi~i~k~~~~~~~~~~~~~~~~~~~d~yf~e~~~~~------------- 232 (298)
T 2o0a_A 175 ENGLEDLPLNFSCDEHPN------LPH---SGMGIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNLK------------- 232 (298)
T ss_dssp SSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------CCCEEEEEEEECSHH-------------
T ss_pred cccHHHHHHHhhcccccc------cCC---CCceEEEEEEecCcccccccCCCCceEEEEEEeCCHH-------------
Confidence 99 999988874332221 111 2345666666543322222211012346777763211
Q ss_pred HHHHhhhhHHHHHHHHHHHhhCCCCCCCCCCccccccccccCCCcceeeeeecCCCCCChHhHHHHHHHHHHhccCcccc
Q 003781 172 EAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKP 251 (796)
Q Consensus 172 Ea~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqDSLGGnskT~mIatVSPs~~~~eETlsTL~fA~RAk~Ikn~p 251 (796)
+...|.+. +..+ .+-.|+++-+|+--|- .+|.|+++++..+.. .-.-|+.+++...++|..
T Consensus 233 -------~~~~l~~~---~~~~----~~~~spi~~il~~ll~-~tks~~~~~l~~~~~----~~~lL~~s~~i~~~~~~~ 293 (298)
T 2o0a_A 233 -------SIEQFDKS---IFKK----ESCETPIALVLKKLIS-DTKSFFLLNLNDSKN----VNKLLTISEEVQTQLCKR 293 (298)
T ss_dssp -------HHHHHHHH---HHTC-----CCCSHHHHHHHHHHH-HSBCEEEEEECCGGG----HHHHHHHHHHHHHHTC--
T ss_pred -------HHHHHHhh---cccc----cccCCcHHHHHHHHHh-cCcceEEEEecCCCc----hhHHHHHHHHhhcccCcc
Confidence 12233332 2222 3457888888876654 589999999986543 334788888888888754
Q ss_pred c
Q 003781 252 E 252 (796)
Q Consensus 252 ~ 252 (796)
.
T Consensus 294 ~ 294 (298)
T 2o0a_A 294 K 294 (298)
T ss_dssp -
T ss_pred c
Confidence 3
No 32
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=96.92 E-value=0.56 Score=49.50 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=32.6
Q ss_pred HHhhhHHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 500 ELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHSRAVENAR 571 (796)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 571 (796)
.++.+.....+++...+..++..+..-+...+.+++. -+...+.+.+..|.-+..+++.+....++..+
T Consensus 48 ~lr~~L~Py~~el~~~~~~~~eelr~kL~p~~~el~~---~l~~~~eeLr~~L~p~~eelr~kl~~~veelk 116 (273)
T 3s84_A 48 ELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMER---VLRENADSLQASLRPHADELKAKIDQNVEELK 116 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3444444445555555555555555444444443322 23334444455555555555555555554333
No 33
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.85 E-value=0.0031 Score=79.09 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=22.2
Q ss_pred CCcHHHHHHHHHHHHhhc---C-CeEEEEEEEEEEEcCceee
Q 003781 16 AGVIPRAVKQIFDILEAQ---H-AEYSMKVTFLELYNEEISD 53 (796)
Q Consensus 16 ~GIIPRal~~LF~~le~~---~-~~~sV~vS~lEIYNE~V~D 53 (796)
.+|.-|.+.+|-..|... . ......|..+.||.=++++
T Consensus 431 k~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~ 472 (1184)
T 1i84_S 431 KAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFE 472 (1184)
T ss_dssp HHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCCcceEEEeecCCcCCCC
Confidence 356667777777777542 1 2234566778888665554
No 34
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.74 E-value=0.0036 Score=78.47 Aligned_cols=9 Identities=11% Similarity=0.180 Sum_probs=5.5
Q ss_pred cCceeecCC
Q 003781 48 NEEISDLLA 56 (796)
Q Consensus 48 NE~V~DLL~ 56 (796)
|..+.||+.
T Consensus 520 n~~~~~lie 528 (1184)
T 1i84_S 520 LQPCIELIE 528 (1184)
T ss_dssp CHHHHHTTS
T ss_pred cHHHHHHHh
Confidence 445677775
No 35
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=96.58 E-value=0.96 Score=47.68 Aligned_cols=27 Identities=7% Similarity=0.124 Sum_probs=13.0
Q ss_pred HhHHhhHHHHHHHHHHHHHHHHHhhHH
Q 003781 506 RSTFGDLNSEVSKHSHALEDLFKGIAS 532 (796)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (796)
....+++.+-+..++.++...+.-.+.
T Consensus 120 ~Py~eelr~k~~~~leeLr~~l~P~ae 146 (273)
T 3s84_A 120 TPYADEFKVKIDQTVEELRRSLAPYAQ 146 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGCS
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344444555555555555554444433
No 36
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.01 E-value=1.5 Score=43.92 Aligned_cols=116 Identities=17% Similarity=0.179 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 003781 310 MELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKK----LEETEHALSDLEEKHRQANATIKEKDFLIANLLKSEK 385 (796)
Q Consensus 310 le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~----l~~~~~~L~~le~~l~~~~~~l~e~~~~i~~l~~~e~ 385 (796)
|+.+++..+++...++........+...++.++.....+ +..++..+..+......+...+.+-+.....+....-
T Consensus 47 LE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R 126 (189)
T 2v71_A 47 LEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKR 126 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 344455555566666666666655566666666555544 4555555556666666666666555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 003781 386 ALVERAIELRTELENAASDVSNLFAKIERKDKIEEGNRIL 425 (796)
Q Consensus 386 ~l~~~~~~l~~~l~~~~~~v~~L~~kl~rk~~~~~~n~~~ 425 (796)
....-...+...++...+.+.-|...+++|..+....+.+
T Consensus 127 ~~~~SleD~e~kln~aiEr~alLE~El~EKe~l~~~~QRL 166 (189)
T 2v71_A 127 ATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRL 166 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555556677777778888888888888877776655554
No 37
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=95.08 E-value=3.7 Score=42.46 Aligned_cols=40 Identities=13% Similarity=0.075 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 003781 333 LLTAELSEKLEKTEKKLEETEHALSDLEEKHRQANATIKE 372 (796)
Q Consensus 333 ~~~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~~l~e 372 (796)
.+..++...+..++..+...+..+.+++..+...+..+..
T Consensus 32 ~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~ 71 (256)
T 3na7_A 32 KDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQD 71 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444444444444444433333
No 38
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=94.57 E-value=4.2 Score=40.62 Aligned_cols=29 Identities=14% Similarity=0.171 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 338 LSEKLEKTEKKLEETEHALSDLEEKHRQA 366 (796)
Q Consensus 338 l~~~l~~~~~~l~~~~~~L~~le~~l~~~ 366 (796)
|+.+|..+++....+...+..+..++...
T Consensus 47 LE~eL~~~Ek~~~~L~~~~~~L~~E~e~~ 75 (189)
T 2v71_A 47 LEAQLVQAEQRNRDLQADNQRLKYEVEAL 75 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444444333
No 39
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.33 E-value=1.1 Score=51.38 Aligned_cols=31 Identities=6% Similarity=0.152 Sum_probs=14.1
Q ss_pred eeecCCCCCChHhHHHHHHHHHHhccCcccc
Q 003781 221 IATVSPSIHCLEETLSTLDYAHRAKNIKNKP 251 (796)
Q Consensus 221 IatVSPs~~~~eETlsTL~fA~RAk~Ikn~p 251 (796)
+||-.+....+...+..+.....+......|
T Consensus 391 ~cc~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 421 (597)
T 3oja_B 391 LCCKESDKPYLDRLLQYIALTSVVEKVQRAQ 421 (597)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTC----
T ss_pred ccccCCCccchhHHHHHhhHHHHhhcccccc
Confidence 3444444444555555666555555554443
No 40
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.70 E-value=17 Score=50.04 Aligned_cols=20 Identities=10% Similarity=0.227 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003781 262 MIKDLYSEIDRLKQEVYAAR 281 (796)
Q Consensus 262 lik~l~~EI~~Lk~el~~~r 281 (796)
+|+-|..-..+-+.++...+
T Consensus 1900 li~~y~~ll~~K~~el~~~~ 1919 (3245)
T 3vkg_A 1900 FINQVVLLINEKRDQLEEEQ 1919 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555444455555554443
No 41
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=92.28 E-value=3.7 Score=51.13 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=23.8
Q ss_pred CCcHHHHHHHHHHHHhhc---CCeEEEEEEEEEEEcCceee
Q 003781 16 AGVIPRAVKQIFDILEAQ---HAEYSMKVTFLELYNEEISD 53 (796)
Q Consensus 16 ~GIIPRal~~LF~~le~~---~~~~sV~vS~lEIYNE~V~D 53 (796)
.+|.-|.+.+|-..+... .......|..+.||.=++++
T Consensus 405 k~lY~~LF~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~f~ 445 (1080)
T 2dfs_A 405 KHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFE 445 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSSCCCEEEEEEEECCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHhhccccccCceEEeeccCCccccC
Confidence 366677777777776542 22234566778888666655
No 42
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=92.12 E-value=1.8 Score=44.59 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003781 428 MFQSQLTQQLEILHKTVATS 447 (796)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~ 447 (796)
+++..+.+.++.++.++.-+
T Consensus 103 el~~~~~~~~eelr~~L~P~ 122 (243)
T 2a01_A 103 DFQKKWQEEMELYRQKVEPL 122 (243)
T ss_dssp HHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHH
Confidence 33333344444444333333
No 43
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=91.62 E-value=6.4 Score=48.95 Aligned_cols=9 Identities=44% Similarity=0.279 Sum_probs=4.4
Q ss_pred CCCcceeee
Q 003781 213 GGKTKTCII 221 (796)
Q Consensus 213 GGnskT~mI 221 (796)
-|.+|.+|=
T Consensus 744 ~G~TKVF~r 752 (1080)
T 2dfs_A 744 FGKTKIFFR 752 (1080)
T ss_dssp ECSSEEEEC
T ss_pred eccccchhc
Confidence 355555543
No 44
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=91.36 E-value=8.5 Score=35.25 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 391 AIELRTELENAASDVSNLFAKIERKDKIE 419 (796)
Q Consensus 391 ~~~l~~~l~~~~~~v~~L~~kl~rk~~~~ 419 (796)
...+.+.++...+...-|..++++|..+.
T Consensus 79 LeD~E~k~n~aiErnalLE~El~EKe~L~ 107 (111)
T 2v66_B 79 LEDFEQRLNQAIERNAFLESELDEKESLL 107 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666677777777777776654
No 45
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=91.31 E-value=2.1 Score=44.13 Aligned_cols=11 Identities=9% Similarity=-0.052 Sum_probs=4.0
Q ss_pred hhhhHHHhHHH
Q 003781 671 STFSVKAEWSA 681 (796)
Q Consensus 671 ~~~~~~~~~~~ 681 (796)
++..+..-|+.
T Consensus 225 ~~~~l~~~~e~ 235 (243)
T 2a01_A 225 FKVSFLSALEE 235 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 46
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=90.68 E-value=68 Score=44.44 Aligned_cols=34 Identities=12% Similarity=0.277 Sum_probs=18.2
Q ss_pred hCCCcCCccchHHH--------HHHHHHHHHHHHHHHHHHHH
Q 003781 283 KNGIYIPRDRYLQE--------EAEKKAMAEKIERMELESES 316 (796)
Q Consensus 283 k~gv~~~~~~~~~~--------e~e~k~~~~~ie~le~~l~~ 316 (796)
+...|.++.+|.+. ...++++..+..+++.-+++
T Consensus 1887 ~R~~yvTP~syLeli~~y~~ll~~K~~el~~~~~rl~~GL~K 1928 (3245)
T 3vkg_A 1887 GRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKK 1928 (3245)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578888888753 23333344444454444433
No 47
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=89.67 E-value=16 Score=35.72 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003781 392 IELRTELENAASDVSNLFAKI 412 (796)
Q Consensus 392 ~~l~~~l~~~~~~v~~L~~kl 412 (796)
..+...+.....+...|..++
T Consensus 107 ~~~k~~~~k~~~e~r~L~Ekl 127 (168)
T 3o0z_A 107 KHLKHNLEKVEGERKEAQDML 127 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333444444433
No 48
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=89.42 E-value=7.6 Score=44.26 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 003781 266 LYSEIDRLKQE 276 (796)
Q Consensus 266 l~~EI~~Lk~e 276 (796)
+..++..|+.+
T Consensus 461 ~~~~i~~l~~~ 471 (597)
T 3oja_B 461 LRAEVQQLTNE 471 (597)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33344444433
No 49
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=84.12 E-value=24 Score=32.43 Aligned_cols=80 Identities=21% Similarity=0.311 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 264 KDLYSEIDRLKQEVYAAREKNGIYIPRDRYLQEEAEKKAMAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLE 343 (796)
Q Consensus 264 k~l~~EI~~Lk~el~~~r~k~gv~~~~~~~~~~e~e~k~~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~ 343 (796)
.-|..+|..|+.++..+... -.++..++.+....+..++..|+........++..+.
T Consensus 16 ~~ye~~I~~LR~qid~~~~e-----------------------~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~ 72 (119)
T 3ol1_A 16 DLYEEEMRELRRQVDQLTND-----------------------KARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQ 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34566777777777544321 1223344444555566666777766666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003781 344 KTEKKLEETEHALSDLEEKHRQA 366 (796)
Q Consensus 344 ~~~~~l~~~~~~L~~le~~l~~~ 366 (796)
.+++.++...-.-.+++.++..+
T Consensus 73 ~lrK~lD~~~l~r~dLE~~iesL 95 (119)
T 3ol1_A 73 SFRQDVDNASLARLDLERKVESL 95 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhcccHHHHHHHHHHHHHHHH
Confidence 66666655554444444444433
No 50
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=83.11 E-value=23 Score=40.28 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Q 003781 468 TKAEATEELRGRLGKLKAMYGSGIKALDGIAGELDGN 504 (796)
Q Consensus 468 ~~~~~~~~l~~~~~~~k~~~~~~~e~i~~~~~~~~~~ 504 (796)
...+...+|+.+|.-|+..+++.+..|+.|...|+..
T Consensus 107 tynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq 143 (562)
T 3ghg_A 107 TYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQ 143 (562)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556777777777777777777676666655544
No 51
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=81.93 E-value=31 Score=31.58 Aligned_cols=22 Identities=45% Similarity=0.490 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 003781 262 MIKDLYSEIDRLKQEVYAAREK 283 (796)
Q Consensus 262 lik~l~~EI~~Lk~el~~~r~k 283 (796)
..++|...+.+|+.++...|.|
T Consensus 4 ~~rdL~~~~~~L~~E~e~~k~K 25 (111)
T 2v66_B 4 RNRDLQADNQRLKYEVEALKEK 25 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777788888887777654
No 52
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=80.86 E-value=35 Score=38.86 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 003781 392 IELRTELENAASDVSNLFAKIE 413 (796)
Q Consensus 392 ~~l~~~l~~~~~~v~~L~~kl~ 413 (796)
..|++.|++...++..|.--|+
T Consensus 134 rvLQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 134 QLLQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555544444
No 53
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=78.61 E-value=52 Score=32.15 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 542 QSSLYKQEEKLTAYAQQQREAHSR 565 (796)
Q Consensus 542 ~~~~~~~~~e~~~~~~~~~~~~~~ 565 (796)
..++.+.+..+.=+..++++....
T Consensus 110 ~~~~e~lr~~l~Py~~el~~~~~~ 133 (185)
T 3r2p_A 110 QEEMELYRQKVEPLRAELQEGARQ 133 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHh
Confidence 344444555555555555554443
No 54
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=76.85 E-value=1.2e+02 Score=35.27 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=48.8
Q ss_pred HhHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHhhhhHhHHHhhhhh
Q 003781 589 SNLTKIVEEAQTVNDQKLFEFEKKFEESAANEERQLLEKVAELLASSNARKKQLVQMAVQDLRESASSRTSQLQKEMSTM 668 (796)
Q Consensus 589 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (796)
..+...++.-..+....+.+++.+. +.||++++.+...+|+.....|..++.. ........|+.++..+
T Consensus 511 ~~~~~~~~~~~~~~~e~~~ql~~km----e~~~~~~~~e~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~ei~~l 579 (592)
T 1f5n_A 511 RKNEQMMEQKERSYQEHLKQLTEKM----ENDRVQLLKEQERTLALKLQEQEQLLKE-------GFQKESRIMKNEIQDL 579 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 5556666666666666666666655 4678999999999999999999966544 3444445555555555
Q ss_pred hhh
Q 003781 669 QDS 671 (796)
Q Consensus 669 ~~~ 671 (796)
+.-
T Consensus 580 ~~~ 582 (592)
T 1f5n_A 580 QTK 582 (592)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 55
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=75.00 E-value=31 Score=31.90 Aligned_cols=24 Identities=33% Similarity=0.512 Sum_probs=20.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 003781 258 MKSAMIKDLYSEIDRLKQEVYAAR 281 (796)
Q Consensus 258 ~~~~lik~l~~EI~~Lk~el~~~r 281 (796)
.++.+|..|+.||+.|+.++....
T Consensus 12 ~rD~~Ie~Lkreie~lk~ele~l~ 35 (120)
T 3i00_A 12 EKDHLIERLYREISGLKAQLENMK 35 (120)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999987654
No 56
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=71.62 E-value=56 Score=29.19 Aligned_cols=55 Identities=20% Similarity=0.288 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 303 MAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALS 357 (796)
Q Consensus 303 ~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L~ 357 (796)
+++++.+++.++...+.++..|...+..........+.....++.+++++...|=
T Consensus 10 lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLF 64 (97)
T 2eqb_B 10 LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLF 64 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555566666666666666666666666666666666666666655443
No 57
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=71.52 E-value=68 Score=32.14 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHhhhHHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 489 SGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHS 564 (796)
Q Consensus 489 ~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 564 (796)
...+.+......+..+.....+.|...+..+.+.+..-+.....++...+ ..++.+.+..+.-+..+++....
T Consensus 58 ~l~~~l~p~~~e~~~~l~~~~~~lr~~l~kd~ee~r~~l~py~~el~~~~---~~~~e~lr~~L~Py~~el~~~~~ 130 (216)
T 2lem_A 58 QLQERLGPLTRDFWDNLEKETDWVRQEMNKDLEEVKQKVQPYLDEFQKKW---KEDVELYRQKASPQGAELQESAR 130 (216)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCHHHHHH---HHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHhHHHHHHHHHHhccHHHHHHhhhHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455555555555555555555555554444444443332 33444444444444444444333
No 58
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=71.34 E-value=2.7 Score=42.56 Aligned_cols=86 Identities=10% Similarity=0.164 Sum_probs=36.0
Q ss_pred HHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHhHhh
Q 003781 505 SRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHSRAVENARSV-SKVTVNFFKT 583 (796)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~ 583 (796)
+...++.+...+..+...+..-+...+.++. ..+...+.+.+.-|.-+..+++.+....++..+.. .-+...|..+
T Consensus 96 l~py~~el~~~~~~~~e~lr~~L~Py~~el~---~~~~~~~e~Lr~~L~p~~e~lr~kl~~~~e~lk~~l~P~~ee~~~k 172 (216)
T 2lem_A 96 VQPYLDEFQKKWKEDVELYRQKASPQGAELQ---ESARQKLQELQGRLSPVAEEFRDRMRTHVDSLRTQLAPHSEQMRES 172 (216)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHTSCHHHHHH---HHHHCSCCSSCCSCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence 3344444444445555554443333333221 22222233333333344444444444444444332 2334445555
Q ss_pred HHHHHHhHHH
Q 003781 584 LDMHASNLTK 593 (796)
Q Consensus 584 ~~~~~~~l~~ 593 (796)
+...+..|..
T Consensus 173 l~~~leeL~~ 182 (216)
T 2lem_A 173 LAQRLAELKS 182 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 5555555544
No 59
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=65.49 E-value=74 Score=28.27 Aligned_cols=12 Identities=42% Similarity=0.465 Sum_probs=4.2
Q ss_pred HHHHHHHHHHHH
Q 003781 346 EKKLEETEHALS 357 (796)
Q Consensus 346 ~~~l~~~~~~L~ 357 (796)
.+.+..++..+.
T Consensus 50 ~kk~~~lE~eld 61 (101)
T 3u1c_A 50 EKQLRVTEDSRD 61 (101)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 60
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=63.18 E-value=1.5e+02 Score=32.53 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 390 RAIELRTELENAASDVSNLFAKIE 413 (796)
Q Consensus 390 ~~~~l~~~l~~~~~~v~~L~~kl~ 413 (796)
....|+..|++...++..|..+|+
T Consensus 135 ~ir~Lq~~l~~q~~kiqRLE~~Id 158 (390)
T 1deq_A 135 RINLLQKNVRDQLVDMKRLEVDID 158 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334556666666666666665553
No 61
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=62.83 E-value=1.2e+02 Score=29.68 Aligned_cols=11 Identities=9% Similarity=0.386 Sum_probs=4.9
Q ss_pred HHHHHHHHHHH
Q 003781 404 DVSNLFAKIER 414 (796)
Q Consensus 404 ~v~~L~~kl~r 414 (796)
.+.+|..++++
T Consensus 98 ri~~L~~El~~ 108 (168)
T 3o0z_A 98 RITSLQEEVKH 108 (168)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444443
No 62
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=61.11 E-value=6.6 Score=41.99 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=8.2
Q ss_pred hhhHHHHHHHHHHHHH
Q 003781 603 DQKLFEFEKKFEESAA 618 (796)
Q Consensus 603 ~~~l~~~~~~~~~~~~ 618 (796)
...+.+++.+++..+.
T Consensus 241 ~~q~ee~~~ql~~~ae 256 (307)
T 2l7b_A 241 KEQVAEVRAKLEEQAQ 256 (307)
T ss_dssp CSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3355555555555544
No 63
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=60.27 E-value=39 Score=36.00 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 003781 429 FQSQLTQQLEILHKTVA 445 (796)
Q Consensus 429 ~~~~~~~~~~~~~~~~~ 445 (796)
++..+...++.++.++.
T Consensus 152 L~~~~~~~~eeLr~~L~ 168 (307)
T 2l7b_A 152 LRKRLLRDADDLQKRLA 168 (307)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHh
Confidence 33333444444443333
No 64
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=59.17 E-value=1.9e+02 Score=32.41 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Q 003781 405 VSNLFAKIERKDKIEEGNRILIQMFQSQLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVSTKAEATEELRGRLGKLK 484 (796)
Q Consensus 405 v~~L~~kl~rk~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~k 484 (796)
+..+.+.+.........|...+.++-.+|..++..++.++..-+ +.|+.|.. .+.++..+|.+|.
T Consensus 88 ~~~~~~~lk~~~~q~~dndn~~~e~S~eLe~ri~yIK~kVd~qi----~~IrvLq~-----------~l~~q~skIQRLE 152 (491)
T 1m1j_A 88 IVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRVATQV----NRIKALQN-----------SIQEQVVEMKRLE 152 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH-----------HHHHHHHHHHHHH
Confidence 44445555555566677888888888888888888887777654 33333333 2344455555555
Q ss_pred HHHhhHHHHH
Q 003781 485 AMYGSGIKAL 494 (796)
Q Consensus 485 ~~~~~~~e~i 494 (796)
..+....+..
T Consensus 153 ~dI~~q~~~C 162 (491)
T 1m1j_A 153 VDIDIKIRAC 162 (491)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 5555444433
No 65
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=58.99 E-value=1.3e+02 Score=28.95 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 265 DLYSEIDRLKQEVYAAREKNGIYIPRDRYLQEEAEKKAMAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEK 344 (796)
Q Consensus 265 ~l~~EI~~Lk~el~~~r~k~gv~~~~~~~~~~e~e~k~~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~ 344 (796)
.|..++..++.++...+.+.+.+ +. ..+++..+...+...+.++..|...+..........+....+
T Consensus 17 ~LeD~L~~~R~el~~~~~ri~~l---------E~----~r~~~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ 83 (154)
T 2ocy_A 17 HLEEQLNKSLKTIASQKAAIENY---------NQ----LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADK 83 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT---------HH----HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH---------HH----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666555432221 11 122333344444445555556666665555555555555555
Q ss_pred HHHHHHHHHHHH
Q 003781 345 TEKKLEETEHAL 356 (796)
Q Consensus 345 ~~~~l~~~~~~L 356 (796)
++.+++++...|
T Consensus 84 ie~ElEeLTasL 95 (154)
T 2ocy_A 84 LNKEVEDLTASL 95 (154)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555554444
No 66
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=57.92 E-value=90 Score=28.14 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q 003781 346 EKKLEETEHALSDLEEKHRQANATIKEKDFL 376 (796)
Q Consensus 346 ~~~l~~~~~~L~~le~~l~~~~~~l~e~~~~ 376 (796)
.++++..+.....++..+..++..+.+++.+
T Consensus 57 ~re~e~~Kr~~~~L~~~~~~lk~~L~qRD~L 87 (103)
T 4h22_A 57 NKEFEREKHAHSILQFQFAEVKEALKQREEM 87 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333344444444444444444433
No 67
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=57.48 E-value=1.3e+02 Score=28.29 Aligned_cols=10 Identities=40% Similarity=0.514 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q 003781 408 LFAKIERKDK 417 (796)
Q Consensus 408 L~~kl~rk~~ 417 (796)
|.+.+.+|+.
T Consensus 103 LEADLKEKDs 112 (167)
T 4gkw_A 103 LEADLKEKDS 112 (167)
T ss_dssp HHHTHHHHHH
T ss_pred HHhHHhhhhH
Confidence 3333333333
No 68
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=57.12 E-value=1.5e+02 Score=28.89 Aligned_cols=20 Identities=15% Similarity=0.373 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003781 429 FQSQLTQQLEILHKTVATSV 448 (796)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~ 448 (796)
++..+...+++++.++.-+.
T Consensus 83 Lr~~l~kdlee~r~~l~P~~ 102 (185)
T 3r2p_A 83 LRQEMSKDLEEVKAKVQPYL 102 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHH
Confidence 33344444445554444443
No 69
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=55.41 E-value=47 Score=29.95 Aligned_cols=12 Identities=8% Similarity=0.279 Sum_probs=4.3
Q ss_pred HHHHHHHHHHHH
Q 003781 350 EETEHALSDLEE 361 (796)
Q Consensus 350 ~~~~~~L~~le~ 361 (796)
..++..+..++.
T Consensus 68 ~~L~~~~~~lk~ 79 (103)
T 4h22_A 68 SILQFQFAEVKE 79 (103)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 70
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=55.35 E-value=1.4e+02 Score=28.31 Aligned_cols=63 Identities=21% Similarity=0.276 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 304 AEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALSDLEEKHRQA 366 (796)
Q Consensus 304 ~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~ 366 (796)
.++|+.++.++........+....|+.......-+...|...+...+.....+..++..++.+
T Consensus 51 eEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~ 113 (147)
T 2b9c_A 51 EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTV 113 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555554444444444444444444444444444444444444444444444444333
No 71
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=54.79 E-value=1.1e+02 Score=26.56 Aligned_cols=7 Identities=14% Similarity=0.520 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 003781 405 VSNLFAK 411 (796)
Q Consensus 405 v~~L~~k 411 (796)
+++|..|
T Consensus 71 l~~LLgk 77 (81)
T 2jee_A 71 LQALLGR 77 (81)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 3344333
No 72
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=54.44 E-value=1.1e+02 Score=26.50 Aligned_cols=46 Identities=24% Similarity=0.222 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Q 003781 335 TAELSEKLEKTEKKLEETEHALSDLEEKHRQANATIKEKDFLIANL 380 (796)
Q Consensus 335 ~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~~l~e~~~~i~~l 380 (796)
..+|+-++..++.+-.+.+..|..+++++..++..+..++..|..+
T Consensus 28 i~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL 73 (81)
T 3qh9_A 28 LRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERL 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHH
Confidence 3345555555555555555555555556655656666555554443
No 73
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=53.35 E-value=1.6e+02 Score=28.30 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 003781 338 LSEKLEKTEKKLEETEHALSDLEEKHRQANATI 370 (796)
Q Consensus 338 l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~~l 370 (796)
+...|...+...+.....+..++..++.+...+
T Consensus 26 ~E~dLEraEERae~aE~k~~eLEeeL~~v~~nl 58 (155)
T 2efr_A 26 LKKLLERAEERAELSEGKSAELEEELKTVTNNL 58 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444444444444444444444333
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=53.03 E-value=2.6e+02 Score=30.67 Aligned_cols=8 Identities=25% Similarity=0.136 Sum_probs=3.4
Q ss_pred HHHHHHHH
Q 003781 265 DLYSEIDR 272 (796)
Q Consensus 265 ~l~~EI~~ 272 (796)
++..|++.
T Consensus 325 eF~~Eve~ 332 (487)
T 3oja_A 325 TERLECER 332 (487)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 75
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=50.85 E-value=1.2e+02 Score=26.16 Aligned_cols=59 Identities=22% Similarity=0.351 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 310 MELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALSDLEEKHRQANA 368 (796)
Q Consensus 310 le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~ 368 (796)
+..++++....+..++..|+.........+..+..+++.+....-.-.+++.++..++.
T Consensus 19 l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~e 77 (86)
T 3swk_A 19 VEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQE 77 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566677778888887777778888877777777766666666655554443
No 76
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=50.84 E-value=1.1e+02 Score=25.82 Aligned_cols=10 Identities=20% Similarity=0.425 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 003781 306 KIERMELESE 315 (796)
Q Consensus 306 ~ie~le~~l~ 315 (796)
+.+.++..+.
T Consensus 21 ~~~~~e~~l~ 30 (81)
T 1ic2_A 21 RAEQAEADKK 30 (81)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 77
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=49.12 E-value=3e+02 Score=30.16 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 405 VSNLFAKIERKDKIEEGNRILIQMFQSQLTQQLEILHKTVATSV 448 (796)
Q Consensus 405 v~~L~~kl~rk~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (796)
+..+.+.+..+......|...+.+|-.+|..++..|+.+|..-+
T Consensus 90 ~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~ 133 (390)
T 1deq_A 90 TKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQV 133 (390)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344444444444556666666666666666666666655443
No 78
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=47.97 E-value=1.7e+02 Score=26.96 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHH
Q 003781 354 HALSDLEEKHRQAN 367 (796)
Q Consensus 354 ~~L~~le~~l~~~~ 367 (796)
..+..++..+.+++
T Consensus 84 ~~i~~lE~eL~~~r 97 (131)
T 3tnu_A 84 EMIGSVEEQLAQLR 97 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444443333
No 79
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=45.57 E-value=4.3e+02 Score=30.98 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 003781 429 FQSQLTQQLEILHKTVATSVTQQEQQLKDMEEDMQSFVS 467 (796)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 467 (796)
|..++.+..+.+...+...+..|...+..+......|..
T Consensus 606 f~~eL~k~~~~~~~~i~~~~~~Q~~ll~~i~~~~~~f~~ 644 (704)
T 2xs1_A 606 SVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSK 644 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445555555555555555555555555555543
No 80
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=44.45 E-value=1.5e+02 Score=25.50 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 003781 337 ELSEKLEKTEKKLEETEHALSD 358 (796)
Q Consensus 337 ~l~~~l~~~~~~l~~~~~~L~~ 358 (796)
-+..+|.+.+.....+...|.+
T Consensus 28 ~i~EELs~vr~~ni~~eskL~e 49 (81)
T 1wt6_A 28 SLSREMEAIRTDNQNFASQLRE 49 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444333333333333
No 81
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=42.44 E-value=4.2e+02 Score=29.98 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003781 263 IKDLYSEIDRLKQEVYAA 280 (796)
Q Consensus 263 ik~l~~EI~~Lk~el~~~ 280 (796)
+-.++.|+.|.+.....+
T Consensus 11 la~yq~elarvqkana~a 28 (497)
T 3iox_A 11 LTAYQTELARVQKANADA 28 (497)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555555555544443
No 82
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=42.17 E-value=3.6e+02 Score=29.77 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 299 EKKAMAEKIERMELESESKDKQLMELQELYNS 330 (796)
Q Consensus 299 e~k~~~~~ie~le~~l~~~~~~l~~l~~~~~~ 330 (796)
..+.|.+++..++..+.....++..|+..+..
T Consensus 85 ~skkml~~~~~~e~~~~~~~~~i~~l~~~~~~ 116 (409)
T 1m1j_C 85 KSKKIIEEIIRYENTILAHENTIQQLTDMHIM 116 (409)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Confidence 33455566666665555555555555554443
No 83
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=41.92 E-value=1.7e+02 Score=25.24 Aligned_cols=52 Identities=10% Similarity=0.095 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 003781 319 KQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHALSDLEEKHRQANATI 370 (796)
Q Consensus 319 ~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L~~le~~l~~~~~~l 370 (796)
+++..|+-.......+...++.+|..++.++..++..|..-+..++.++..+
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL~~~l 77 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3444455555544555556677777777777777777766666665555443
No 84
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=40.38 E-value=4.2e+02 Score=29.33 Aligned_cols=23 Identities=9% Similarity=0.221 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHH
Q 003781 473 TEELRGRLGKLKAMYGSGIKALD 495 (796)
Q Consensus 473 ~~~l~~~~~~~k~~~~~~~e~i~ 495 (796)
+.++..++..+=..+++|...+.
T Consensus 199 l~~le~elA~~L~SLT~HyDqC~ 221 (413)
T 4hpq_C 199 ADQLEQELADFLKSFTDHFDKCS 221 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555655554
No 85
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=39.88 E-value=78 Score=26.99 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 303 MAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLE 350 (796)
Q Consensus 303 ~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~ 350 (796)
+.++|..+|..+.-.+..+++|....-.++++.+.|...+..+...+.
T Consensus 12 le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 12 LEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLG 59 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777776666666777666666666555555555544444433
No 86
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=38.97 E-value=4.6e+02 Score=29.43 Aligned_cols=39 Identities=15% Similarity=0.282 Sum_probs=26.5
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Q 003781 466 VSTKAEATEELRGRLGKLKAMYGSGIKALDGIAGELDGN 504 (796)
Q Consensus 466 ~~~~~~~~~~l~~~~~~~k~~~~~~~e~i~~~~~~~~~~ 504 (796)
-+...+..++|+.++.-++..+++.+..|+.|+..|+..
T Consensus 106 dn~~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q 144 (491)
T 1m1j_A 106 DENYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQ 144 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566777777777777777777777777666654
No 87
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=37.75 E-value=2e+02 Score=24.84 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 316 SKDKQLMELQELYNSQLLLTAELSEKL 342 (796)
Q Consensus 316 ~~~~~l~~l~~~~~~~~~~~~~l~~~l 342 (796)
.+..++..++..+........+|....
T Consensus 18 ~~eeel~~lke~l~k~e~~rkele~~~ 44 (89)
T 3bas_A 18 EQLKQMDKMKEDLAKTERIKKELEEQN 44 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444443333333333333
No 88
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=37.10 E-value=2.5e+02 Score=25.73 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHH
Q 003781 353 EHALSDLEEKHRQAN 367 (796)
Q Consensus 353 ~~~L~~le~~l~~~~ 367 (796)
+..+..++..+.+++
T Consensus 81 q~~i~~lE~eL~~~r 95 (129)
T 3tnu_B 81 RNKLAELEEALQKAK 95 (129)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHH
Confidence 333444444444333
No 89
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=36.95 E-value=3.4e+02 Score=27.33 Aligned_cols=83 Identities=5% Similarity=0.012 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHh-hHHHHHHHHHHHHhhhHHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 475 ELRGRLGKLKAMYG-SGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLT 553 (796)
Q Consensus 475 ~l~~~~~~~k~~~~-~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 553 (796)
+...++...+..+. ..++.+-.+-.-..++-...++.|...+..+..-.+..+..+..++..-+++|...+...+.+.+
T Consensus 162 Ea~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~ 241 (265)
T 2q12_A 162 EVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMD 241 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555433 33444433332223334467777777777776666666655555667777777777766665554
Q ss_pred HHHH
Q 003781 554 AYAQ 557 (796)
Q Consensus 554 ~~~~ 557 (796)
..++
T Consensus 242 ~~~~ 245 (265)
T 2q12_A 242 SDIE 245 (265)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 90
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=36.57 E-value=2.9e+02 Score=26.46 Aligned_cols=13 Identities=8% Similarity=0.330 Sum_probs=6.8
Q ss_pred HHHHHhHHHHHHH
Q 003781 417 KIEEGNRILIQMF 429 (796)
Q Consensus 417 ~~~~~n~~~~~~~ 429 (796)
.++.+|..++..|
T Consensus 121 kLq~EN~~LV~RW 133 (152)
T 3a7p_A 121 DLKKEHSQLVARW 133 (152)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4445555555554
No 91
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=35.54 E-value=2.3e+02 Score=24.91 Aligned_cols=60 Identities=25% Similarity=0.389 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 297 EAEKKAMAEKIERMELESESKDKQLMELQELYNSQLLLTAELSEKLEKTEKKLEETEHAL 356 (796)
Q Consensus 297 e~e~k~~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~L 356 (796)
+.+...+...|..++.+...++.+=...-..|+....+..++..++..++..+......|
T Consensus 31 Eke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qL 90 (96)
T 3q8t_A 31 EKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQL 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555555555544444444444455444444444444444444444433333
No 92
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=35.49 E-value=1.1e+02 Score=28.75 Aligned_cols=13 Identities=23% Similarity=0.350 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHH
Q 003781 433 LTQQLEILHKTVA 445 (796)
Q Consensus 433 ~~~~~~~~~~~~~ 445 (796)
+...++++...++
T Consensus 72 ie~ElE~LTasLF 84 (135)
T 2e7s_A 72 LNKEVEDLTASLF 84 (135)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4445555554444
No 93
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=32.63 E-value=2.6e+02 Score=24.59 Aligned_cols=26 Identities=23% Similarity=0.343 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 338 LSEKLEKTEKKLEETEHALSDLEEKH 363 (796)
Q Consensus 338 l~~~l~~~~~~l~~~~~~L~~le~~l 363 (796)
+..+|..++++-..+...+..++...
T Consensus 23 L~~eL~~lEke~~~l~~el~~le~E~ 48 (96)
T 3q8t_A 23 LIQELEDVEKNRKVVAENLEKVQAEA 48 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33444444444444444444444333
No 94
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=28.94 E-value=53 Score=37.95 Aligned_cols=26 Identities=19% Similarity=0.437 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 297 EAEKKAMAEKIERMELESESKDKQLM 322 (796)
Q Consensus 297 e~e~k~~~~~ie~le~~l~~~~~~l~ 322 (796)
|.++.++..++.+++.+.......+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~l~ 359 (575)
T 2i1j_A 334 EKKQQEYQDRLRQMQEEMERSQANLL 359 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555555544444333333
No 95
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=28.83 E-value=2.6e+02 Score=23.40 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q 003781 317 KDKQLMELQELYN 329 (796)
Q Consensus 317 ~~~~l~~l~~~~~ 329 (796)
++.+|..|.-...
T Consensus 15 Kq~EI~rLnvlvg 27 (74)
T 2q6q_A 15 KQNEIFELKKIAE 27 (74)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444333333
No 96
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=28.11 E-value=5.7e+02 Score=28.89 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=17.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 291 DRYLQEEAEKKAMAEKIERMELESESKDKQLME 323 (796)
Q Consensus 291 ~~~~~~e~e~k~~~~~ie~le~~l~~~~~~l~~ 323 (796)
+.+.....+.+.+..+++.++.+.....+++..
T Consensus 70 ~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~ 102 (501)
T 1wle_A 70 PGIISTWQELRQLREQIRSLEEEKEAVTEAVRA 102 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555555555555444444443
No 97
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=27.07 E-value=2.8e+02 Score=23.30 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 306 KIERMELESESKDKQLMELQELYN 329 (796)
Q Consensus 306 ~ie~le~~l~~~~~~l~~l~~~~~ 329 (796)
.+..+..++..++.++..|++.+.
T Consensus 19 ~l~~Lr~eL~~Ke~eI~~L~e~i~ 42 (75)
T 3a7o_A 19 TLAILQKELKSKEQEIRRLKEVIA 42 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556666666665555443
No 98
>1tqg_A Chemotaxis protein CHEA; histidine kinase, phosphotransfer, signal transduction, transferase; 0.98A {Thermotoga maritima} SCOP: a.24.10.3
Probab=26.40 E-value=3.1e+02 Score=23.52 Aligned_cols=56 Identities=20% Similarity=0.137 Sum_probs=35.9
Q ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHhhhHHh-HHhhHH
Q 003781 458 MEEDMQSFVSTKAEATEELRGRLGKLKAMY--GSGIKALDGIAGELDGNSRS-TFGDLN 513 (796)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~~~~~~k~~~--~~~~e~i~~~~~~~~~~~~~-~~~~~~ 513 (796)
+.+.+..|+....+.+..+...+..+...- ...+..+.+.++.+|+.+.. ++..+.
T Consensus 3 ~~~l~~~F~~e~~e~l~~l~~~l~~le~~~~~~~~~~~l~r~~HtLKGsa~~~G~~~l~ 61 (105)
T 1tqg_A 3 HMEYLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMA 61 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhhHHHHhcChHHHH
Confidence 345566677776777777777666655432 24567788899999988754 344443
No 99
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=26.24 E-value=1.9e+02 Score=28.97 Aligned_cols=28 Identities=14% Similarity=0.076 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 003781 471 EATEELRGRLGKLKAMYGSGIKALDGIA 498 (796)
Q Consensus 471 ~~~~~l~~~~~~~k~~~~~~~e~i~~~~ 498 (796)
..+-.++.++..++..+....+.+..+.
T Consensus 187 ~~l~~lrr~l~~lrr~l~p~~~vl~~L~ 214 (264)
T 3nvo_A 187 GFLALLRKQLIVMRRYMAPQRDVYARLA 214 (264)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3456777777777777766666555554
No 100
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=25.59 E-value=3.2e+02 Score=27.13 Aligned_cols=29 Identities=10% Similarity=-0.008 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 003781 471 EATEELRGRLGKLKAMYGSGIKALDGIAG 499 (796)
Q Consensus 471 ~~~~~l~~~~~~~k~~~~~~~e~i~~~~~ 499 (796)
..+-.++.++..++..+....+.+..+..
T Consensus 171 ~~l~~lrr~l~~lrr~l~p~r~~l~~L~r 199 (252)
T 3ck6_A 171 YNHIAAQKALISIKRFIRPQQYAIRDLIE 199 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44667777777777777766666655543
No 101
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=25.50 E-value=6.3e+02 Score=26.81 Aligned_cols=79 Identities=5% Similarity=0.004 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHh-hHHHHHHHHHHHHhhhHHhHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 003781 474 EELRGRLGKLKAMYG-SGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKL 552 (796)
Q Consensus 474 ~~l~~~~~~~k~~~~-~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 552 (796)
.|...++...+..+. ..++.+-.+..-..++-...++.+...+.++..-.+..+..+..++..-++.|...+...+.+.
T Consensus 161 ~ea~~~l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~ 240 (385)
T 2q13_A 161 YEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREM 240 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444333 3333333222222233345666666666666666665555444556555666665554444333
No 102
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=25.48 E-value=7.7e+02 Score=27.87 Aligned_cols=18 Identities=11% Similarity=0.268 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 003781 265 DLYSEIDRLKQEVYAARE 282 (796)
Q Consensus 265 ~l~~EI~~Lk~el~~~r~ 282 (796)
+|+.++.....||...+.
T Consensus 6 ~yq~~la~yq~elarvqk 23 (497)
T 3iox_A 6 DYQAKLTAYQTELARVQK 23 (497)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566666666666655443
No 103
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.32 E-value=4.1e+02 Score=24.22 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=36.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 509 FGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHS 564 (796)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 564 (796)
+.+....+.......+.-|..-..++...+..+...|...+.+|+.-.++..+.+.
T Consensus 55 l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Lln 110 (129)
T 3tnu_B 55 VKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMN 110 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666666666666666777777777777777777777666555554433
No 104
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.07 E-value=4.2e+02 Score=24.25 Aligned_cols=56 Identities=4% Similarity=0.045 Sum_probs=35.7
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 509 FGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHS 564 (796)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 564 (796)
+.+....+.......+.-|..-..++...+..+...|...+.+|+.-.++..+.+.
T Consensus 57 l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~ 112 (131)
T 3tnu_A 57 QLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLD 112 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566666666666666677777777777777777777666555554433
No 105
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=23.89 E-value=4.5e+02 Score=24.59 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003781 260 SAMIKDLYSEIDRLKQEVY 278 (796)
Q Consensus 260 ~~lik~l~~EI~~Lk~el~ 278 (796)
...+.+|...++.+..++.
T Consensus 10 ~~~ia~L~~D~~s~~~ele 28 (167)
T 4gkw_A 10 EDEVADLKQDTESLQKQLE 28 (167)
T ss_dssp SSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555554
No 106
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=23.31 E-value=7.8e+02 Score=27.14 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 003781 392 IELRTELENAASDVSNLFAKIERKDKIEEGNRILIQMFQSQLTQ 435 (796)
Q Consensus 392 ~~l~~~l~~~~~~v~~L~~kl~rk~~~~~~n~~~~~~~~~~~~~ 435 (796)
..|+..........++|-.++.|++.....-...+..+..++..
T Consensus 325 ~~L~~~Y~~f~~aY~~lL~Ev~RRr~~~~~~~~i~~~~~~~L~~ 368 (413)
T 4hpq_C 325 RNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQ 368 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555666677777777777666666666555444433
No 107
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=22.61 E-value=3.5e+02 Score=22.90 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 303 MAEKIERMELESESKDKQLMELQELYNSQLL 333 (796)
Q Consensus 303 ~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~ 333 (796)
+++++++|+..++.++..+..|-..|...+.
T Consensus 5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~ 35 (74)
T 3swf_A 5 LEEKVTRMESSVDLLQTRFARILAEYESMQQ 35 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778887777777777666666665443
No 108
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=22.14 E-value=8.7e+02 Score=27.24 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=18.9
Q ss_pred hHHHHHhHhhHHHHHHhHHHHHHHHHHhhhhhHHHHHH
Q 003781 574 SKVTVNFFKTLDMHASNLTKIVEEAQTVNDQKLFEFEK 611 (796)
Q Consensus 574 ~~~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 611 (796)
..++.++.+-|.++..-..+++...+..+.+.|..+..
T Consensus 136 ~~~~~~s~~mle~~~~~~~~~~~~~~~~~i~~l~~~~~ 173 (461)
T 3ghg_B 136 ENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILE 173 (461)
T ss_dssp HHTTSCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHH
Confidence 33444455555555555555555555444444444443
No 109
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=21.84 E-value=3e+02 Score=21.71 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 329 NSQLLLTAELSEKLEKTEKKLEETEHALSDLEE 361 (796)
Q Consensus 329 ~~~~~~~~~l~~~l~~~~~~l~~~~~~L~~le~ 361 (796)
++..++...|+.+.-.+++++.+-...|..++.
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ 38 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHLTKLET 38 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHh
Confidence 333333334444444444444444444444433
No 110
>3kyj_A CHEA3, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_A
Probab=21.32 E-value=5e+02 Score=24.12 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=37.5
Q ss_pred HHHHHHHHhHhhHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHhhhHHh-HHhhHH
Q 003781 457 DMEEDMQSFVSTKAEATEELRGRLGKLKAMY--GSGIKALDGIAGELDGNSRS-TFGDLN 513 (796)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~~~~~~k~~~--~~~~e~i~~~~~~~~~~~~~-~~~~~~ 513 (796)
.+.+.+..|+....+.+..+...+..+...- ...+..|-+.++++|+.+.- ++..+.
T Consensus 8 ~~~ell~~FleEa~E~L~~le~~Ll~le~~~~d~e~l~~lfR~~HTLKGsA~~~G~~~i~ 67 (144)
T 3kyj_A 8 EMDEIWALYADDGAQALDAMEASLLALQAGEDAAAHVGPLFRAVHTFKGNSRVLGLSVVE 67 (144)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhHhhHHHhcCchHHH
Confidence 3455566677777777777777776665542 24567788888999988754 344444
No 111
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=20.65 E-value=3e+02 Score=21.28 Aligned_cols=31 Identities=19% Similarity=0.384 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003781 303 MAEKIERMELESESKDKQLMELQELYNSQLL 333 (796)
Q Consensus 303 ~~~~ie~le~~l~~~~~~l~~l~~~~~~~~~ 333 (796)
+++++++++..++.++..+..|-..|.+.+.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~ 33 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQM 33 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777777766666666666655443
No 112
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=20.39 E-value=4.9e+02 Score=23.69 Aligned_cols=7 Identities=29% Similarity=0.373 Sum_probs=0.0
Q ss_pred HHHHHHH
Q 003781 402 ASDVSNL 408 (796)
Q Consensus 402 ~~~v~~L 408 (796)
..|.+.|
T Consensus 97 Q~eNd~L 103 (112)
T 1x79_B 97 QKDNDSL 103 (112)
T ss_dssp -------
T ss_pred Hhhccch
Confidence 3333333
No 113
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=20.32 E-value=5.7e+02 Score=24.46 Aligned_cols=18 Identities=28% Similarity=0.431 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003781 337 ELSEKLEKTEKKLEETEH 354 (796)
Q Consensus 337 ~l~~~l~~~~~~l~~~~~ 354 (796)
.|+..|..++.++...+.
T Consensus 17 ~LeD~L~~~R~el~~~~~ 34 (154)
T 2ocy_A 17 HLEEQLNKSLKTIASQKA 34 (154)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 455555555544444433
Done!