Query 003782
Match_columns 795
No_of_seqs 372 out of 2906
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:51:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 7E-104 2E-108 927.7 69.0 646 23-778 1-653 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 3.9E-94 1.3E-98 839.6 68.8 594 24-751 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 4.3E-93 1.5E-97 830.8 56.4 594 24-751 2-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 7.3E-87 2.5E-91 771.2 51.0 545 21-691 1-554 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.3E-77 4.4E-82 688.6 48.6 500 24-680 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.3E-61 4.3E-66 542.5 42.8 379 22-419 21-403 (404)
7 4gni_A Putative heat shock pro 100.0 2.4E-61 8.3E-66 540.9 42.6 379 23-422 12-406 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 5.4E-60 1.8E-64 527.7 44.2 374 24-418 18-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 5.9E-59 2E-63 517.1 40.3 377 24-418 2-383 (383)
10 1jce_A ROD shape-determining p 100.0 6.9E-40 2.4E-44 358.2 26.0 311 24-418 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 2.2E-30 7.5E-35 260.4 23.1 211 428-751 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 7.7E-29 2.6E-33 251.9 24.4 210 430-752 1-214 (227)
13 2fsj_A Hypothetical protein TA 99.9 9.1E-27 3.1E-31 253.5 13.8 231 136-415 95-343 (346)
14 2ych_A Competence protein PILM 99.9 3.4E-25 1.2E-29 244.9 19.6 299 23-393 12-332 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 4.2E-24 1.4E-28 225.1 24.4 202 140-414 71-272 (272)
16 1k8k_A ARP3, actin-like protei 99.9 4.1E-25 1.4E-29 247.6 14.3 228 161-416 107-387 (418)
17 2fxu_A Alpha-actin-1, actin, a 99.9 1.2E-24 4.1E-29 239.9 13.3 307 24-415 5-348 (375)
18 3n8e_A Stress-70 protein, mito 99.9 8.1E-24 2.8E-28 205.5 15.9 161 425-691 18-182 (182)
19 4a2a_A Cell division protein F 99.9 1E-22 3.5E-27 226.3 23.5 200 175-417 168-394 (419)
20 2zgy_A Plasmid segregation pro 99.8 3.9E-21 1.3E-25 207.2 11.4 228 134-414 72-319 (320)
21 3h0x_A 78 kDa glucose-regulate 99.8 3.6E-20 1.2E-24 175.3 15.3 147 429-680 2-152 (152)
22 3dob_A Heat shock 70 kDa prote 99.8 4.2E-20 1.4E-24 174.5 12.5 147 429-680 2-152 (152)
23 3dqg_A Heat shock 70 kDa prote 99.8 3.9E-20 1.3E-24 174.5 9.7 146 429-680 2-151 (151)
24 2op6_A Heat shock 70 kDa prote 99.8 8.9E-19 3E-23 166.7 13.5 147 429-680 2-152 (152)
25 1k8k_B ARP2, actin-like protei 99.7 4E-19 1.4E-23 196.8 4.5 215 162-416 105-364 (394)
26 4ehu_A Activator of 2-hydroxyi 99.7 7E-17 2.4E-21 170.2 15.1 183 187-418 69-256 (276)
27 3js6_A Uncharacterized PARM pr 99.7 4.2E-17 1.4E-21 177.3 12.4 207 163-419 115-339 (355)
28 4apw_A ALP12; actin-like prote 99.5 1.5E-14 5.2E-19 155.8 5.3 204 162-418 106-326 (329)
29 1q5l_A Chaperone protein DNAK; 99.5 1E-13 3.4E-18 128.3 9.0 100 425-542 15-118 (135)
30 3dwl_A Actin-related protein 3 99.4 3.8E-13 1.3E-17 149.5 6.8 244 140-416 103-396 (427)
31 3qb0_A Actin-related protein 4 99.3 6.6E-12 2.2E-16 140.9 15.6 177 24-278 23-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.3 7E-12 2.4E-16 112.6 10.9 83 668-752 3-85 (113)
33 4fo0_A Actin-related protein 8 99.1 1.6E-09 5.5E-14 126.5 18.6 94 163-279 200-294 (593)
34 2p32_A Heat shock 70 kDa prote 99.0 2.1E-10 7E-15 104.0 6.7 83 667-751 11-93 (120)
35 2d0o_A DIOL dehydratase-reacti 99.0 6E-10 2.1E-14 121.9 10.6 198 175-416 368-604 (610)
36 1nbw_A Glycerol dehydratase re 99.0 1.1E-09 3.7E-14 120.4 11.0 196 176-415 371-605 (607)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.9 5.9E-10 2E-14 100.0 4.7 78 672-751 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.4 1E-05 3.6E-10 84.0 19.8 71 342-417 187-257 (270)
39 4am6_A Actin-like protein ARP8 97.8 4.1E-05 1.4E-09 86.9 10.1 126 162-316 222-348 (655)
40 2ews_A Pantothenate kinase; PA 96.4 0.026 9.1E-07 58.3 13.2 77 333-414 206-286 (287)
41 2e2o_A Hexokinase; acetate and 96.3 0.99 3.4E-05 46.7 24.6 49 367-416 239-287 (299)
42 3vgl_A Glucokinase; ROK family 96.1 0.19 6.6E-06 53.0 18.3 44 187-233 96-139 (321)
43 1t6c_A Exopolyphosphatase; alp 95.9 0.11 3.8E-06 54.7 15.0 78 177-272 100-177 (315)
44 2i7n_A Pantothenate kinase 1; 95.8 0.08 2.7E-06 56.3 13.1 75 335-414 277-358 (360)
45 2ivn_A O-sialoglycoprotein end 95.7 1.9 6.5E-05 45.5 23.8 65 346-416 228-298 (330)
46 3l0q_A Xylulose kinase; xlylul 95.7 0.02 6.7E-07 65.6 8.5 84 333-421 408-494 (554)
47 4db3_A Glcnac kinase, N-acetyl 95.6 1 3.5E-05 47.5 21.1 48 367-414 269-324 (327)
48 3vov_A Glucokinase, hexokinase 95.4 0.37 1.3E-05 50.2 16.8 44 187-233 98-141 (302)
49 4bc3_A Xylulose kinase; transf 95.3 0.032 1.1E-06 63.6 8.8 78 340-419 407-484 (538)
50 3hz6_A Xylulokinase; xylulose, 95.3 0.036 1.2E-06 62.8 8.9 82 334-421 374-455 (511)
51 2itm_A Xylulose kinase, xylulo 95.1 0.03 1E-06 62.9 7.7 81 335-420 357-438 (484)
52 2zf5_O Glycerol kinase; hypert 95.1 0.042 1.4E-06 62.0 8.8 80 335-420 365-444 (497)
53 4htl_A Beta-glucoside kinase; 95.1 0.92 3.1E-05 47.1 18.6 50 367-416 237-291 (297)
54 2ch5_A NAGK protein; transfera 95.0 4.3 0.00015 42.8 27.0 45 160-205 70-118 (347)
55 3ll3_A Gluconate kinase; xylul 95.0 0.042 1.4E-06 62.1 8.3 81 335-421 364-445 (504)
56 3r8e_A Hypothetical sugar kina 94.9 0.16 5.6E-06 53.5 12.2 49 367-415 260-318 (321)
57 3i8b_A Xylulose kinase; strain 94.8 0.033 1.1E-06 63.1 6.9 79 335-419 395-474 (515)
58 3ezw_A Glycerol kinase; glycer 94.7 0.065 2.2E-06 60.9 9.0 83 334-421 371-454 (526)
59 2qm1_A Glucokinase; alpha-beta 94.6 0.43 1.5E-05 50.2 14.5 49 368-416 263-321 (326)
60 3g25_A Glycerol kinase; IDP007 94.4 0.05 1.7E-06 61.4 7.2 82 335-421 374-456 (501)
61 3jvp_A Ribulokinase; PSI-II, N 94.4 0.049 1.7E-06 62.6 7.0 79 335-419 410-490 (572)
62 3ifr_A Carbohydrate kinase, FG 94.2 0.051 1.7E-06 61.4 6.5 81 335-421 371-452 (508)
63 2dpn_A Glycerol kinase; thermu 94.1 0.09 3.1E-06 59.2 8.3 80 335-419 368-448 (495)
64 3h3n_X Glycerol kinase; ATP-bi 94.1 0.063 2.2E-06 60.6 7.0 82 335-421 373-455 (506)
65 4e1j_A Glycerol kinase; struct 94.0 0.047 1.6E-06 61.9 5.7 53 367-421 425-477 (520)
66 2p3r_A Glycerol kinase; glycer 93.9 0.061 2.1E-06 60.8 6.3 82 335-421 371-453 (510)
67 2d4w_A Glycerol kinase; alpha 93.2 0.16 5.6E-06 57.2 8.4 81 335-420 373-454 (504)
68 2w40_A Glycerol kinase, putati 93.1 0.11 3.6E-06 58.7 6.7 81 335-420 376-458 (503)
69 2uyt_A Rhamnulokinase; rhamnos 92.9 0.12 4.1E-06 58.1 6.6 78 333-416 361-439 (489)
70 2hoe_A N-acetylglucosamine kin 92.7 3.6 0.00012 44.2 17.9 42 187-233 188-229 (380)
71 2ap1_A Putative regulator prot 92.4 0.47 1.6E-05 50.0 10.1 44 187-233 120-163 (327)
72 1z6r_A MLC protein; transcript 91.3 1.8 6.1E-05 47.0 13.6 44 187-233 186-229 (406)
73 3zyy_X Iron-sulfur cluster bin 90.8 5.2 0.00018 45.7 16.8 57 331-388 499-555 (631)
74 1u6z_A Exopolyphosphatase; alp 90.5 2 6.7E-05 48.3 13.1 53 179-233 101-154 (513)
75 1z05_A Transcriptional regulat 89.0 6.6 0.00023 42.8 15.8 44 187-233 208-251 (429)
76 3mdq_A Exopolyphosphatase; str 88.8 0.46 1.6E-05 49.9 5.9 57 177-234 92-149 (315)
77 3h6e_A Carbohydrate kinase, FG 88.6 0.48 1.6E-05 52.9 6.2 72 340-417 362-436 (482)
78 3o8m_A Hexokinase; rnaseh-like 87.9 6.2 0.00021 43.6 14.4 58 173-235 184-243 (485)
79 1sz2_A Glucokinase, glucose ki 87.2 30 0.001 35.9 21.0 48 185-233 99-155 (332)
80 3eno_A Putative O-sialoglycopr 86.6 34 0.0012 35.8 21.5 68 346-418 233-305 (334)
81 3cer_A Possible exopolyphospha 85.8 0.88 3E-05 48.3 6.0 55 178-233 106-163 (343)
82 3bex_A Type III pantothenate k 80.5 13 0.00043 37.3 11.8 16 26-41 5-20 (249)
83 3en9_A Glycoprotease, O-sialog 80.3 42 0.0014 37.6 17.4 61 346-411 232-297 (540)
84 2yhx_A Hexokinase B; transfera 78.9 8.1 0.00028 42.5 10.5 54 175-233 164-219 (457)
85 3hi0_A Putative exopolyphospha 78.4 3.9 0.00013 45.8 7.9 55 177-234 103-158 (508)
86 1woq_A Inorganic polyphosphate 76.7 38 0.0013 33.9 14.3 45 187-233 114-158 (267)
87 3aap_A Ectonucleoside triphosp 75.2 3.7 0.00013 43.6 6.3 44 188-233 108-157 (353)
88 3qbx_A Anhydro-N-acetylmuramic 73.5 8.4 0.00029 40.8 8.3 48 367-416 283-336 (371)
89 4g9i_A Hydrogenase maturation 73.5 7.9 0.00027 45.5 9.0 66 348-418 691-761 (772)
90 1bdg_A Hexokinase; phosphotran 71.0 52 0.0018 35.9 14.4 61 168-233 166-228 (451)
91 1iv0_A Hypothetical protein; r 71.0 4.5 0.00015 34.2 4.6 17 25-41 2-18 (98)
92 3cqy_A Anhydro-N-acetylmuramic 70.9 9 0.00031 40.6 7.8 69 342-416 268-342 (370)
93 3epq_A Putative fructokinase; 69.4 18 0.00063 37.2 9.9 44 187-233 97-140 (302)
94 3ttc_A HYPF, transcriptional r 68.0 19 0.00066 41.2 10.3 66 346-416 583-651 (657)
95 3vth_A Hydrogenase maturation 67.6 15 0.00051 43.1 9.5 67 347-418 678-749 (761)
96 3cj1_A Ectonucleoside triphosp 64.2 6.6 0.00022 43.2 5.4 56 177-233 131-207 (456)
97 3f9m_A Glucokinase; hexokinase 61.0 1.9 6.3E-05 47.5 0.2 55 173-233 183-240 (470)
98 3mcp_A Glucokinase; structural 60.3 67 0.0023 34.0 12.3 45 187-233 108-164 (366)
99 3hm8_A Hexokinase-3; glucose, 60.0 2.8 9.7E-05 45.7 1.4 55 173-232 159-216 (445)
100 4fla_A Regulation of nuclear P 59.3 58 0.002 29.7 9.9 126 645-781 20-148 (152)
101 2gup_A ROK family protein; sug 58.8 35 0.0012 34.5 9.6 50 367-416 227-287 (292)
102 3ven_A O-carbamoyltransferase 58.5 31 0.0011 38.8 9.6 79 336-419 280-360 (576)
103 1vhx_A Putative holliday junct 51.8 7.3 0.00025 35.7 2.6 18 24-41 3-20 (150)
104 3zx3_A Ectonucleoside triphosp 49.7 15 0.00053 40.1 5.1 42 191-233 151-198 (452)
105 3ll3_A Gluconate kinase; xylul 48.5 11 0.00038 42.0 4.0 20 23-42 3-22 (504)
106 1nu0_A Hypothetical protein YQ 48.3 12 0.00042 33.7 3.4 17 25-41 4-20 (138)
107 2uyt_A Rhamnulokinase; rhamnos 46.6 9.2 0.00031 42.5 2.9 21 22-42 2-22 (489)
108 4ep4_A Crossover junction endo 46.2 19 0.00064 33.6 4.4 19 24-42 1-19 (166)
109 1cza_N Hexokinase type I; stru 46.1 1E+02 0.0034 37.0 12.0 56 173-233 630-688 (917)
110 1hjr_A Holliday junction resol 45.6 15 0.00051 34.0 3.6 19 24-42 1-19 (158)
111 2ews_A Pantothenate kinase; PA 45.0 12 0.0004 38.4 3.1 24 18-41 14-37 (287)
112 2aa4_A Mannac kinase, putative 43.8 38 0.0013 34.2 6.9 48 368-415 234-287 (289)
113 1hnj_A Beta-ketoacyl-acyl carr 43.3 26 0.00091 36.0 5.7 48 343-393 213-260 (317)
114 4bc3_A Xylulose kinase; transf 43.3 14 0.00048 41.6 3.7 22 21-42 7-28 (538)
115 4e1j_A Glycerol kinase; struct 42.2 13 0.00045 41.6 3.2 18 24-41 26-43 (520)
116 3l0q_A Xylulose kinase; xlylul 42.1 15 0.0005 41.6 3.7 20 23-42 4-23 (554)
117 3cet_A Conserved archaeal prot 41.7 18 0.0006 37.7 3.8 37 193-234 109-145 (334)
118 3hz6_A Xylulokinase; xylulose, 40.2 18 0.00063 40.3 4.0 20 23-42 4-23 (511)
119 2p3r_A Glycerol kinase; glycer 40.0 16 0.00056 40.7 3.6 18 24-41 3-20 (510)
120 3h6e_A Carbohydrate kinase, FG 39.8 16 0.00054 40.5 3.3 19 24-42 6-24 (482)
121 3ezw_A Glycerol kinase; glycer 39.0 16 0.00055 40.9 3.3 18 24-41 4-21 (526)
122 3jvp_A Ribulokinase; PSI-II, N 38.6 14 0.00049 41.8 2.9 20 23-42 4-23 (572)
123 3h3n_X Glycerol kinase; ATP-bi 37.3 21 0.00071 39.8 3.9 20 23-42 4-23 (506)
124 3i8b_A Xylulose kinase; strain 37.3 17 0.00059 40.6 3.2 19 23-41 4-22 (515)
125 2dpn_A Glycerol kinase; thermu 37.1 16 0.00053 40.7 2.8 17 25-41 3-19 (495)
126 3ifr_A Carbohydrate kinase, FG 36.7 16 0.00056 40.7 2.9 19 24-42 7-25 (508)
127 2w40_A Glycerol kinase, putati 36.6 19 0.00065 40.1 3.4 19 24-42 4-22 (503)
128 3nmd_A CGMP dependent protein 36.5 57 0.002 25.6 5.0 46 653-701 26-71 (72)
129 3g25_A Glycerol kinase; IDP007 36.2 21 0.00072 39.7 3.7 18 24-41 6-23 (501)
130 2ebd_A 3-oxoacyl-[acyl-carrier 35.7 36 0.0012 34.7 5.2 46 345-393 207-252 (309)
131 1kae_A HDH, histidinol dehydro 34.9 64 0.0022 34.6 6.8 72 125-209 126-199 (434)
132 1ub7_A 3-oxoacyl-[acyl-carrier 34.9 34 0.0012 35.2 4.9 47 344-393 216-262 (322)
133 1mzj_A Beta-ketoacylsynthase I 34.8 50 0.0017 34.3 6.2 46 345-393 228-273 (339)
134 4gic_A HDH, histidinol dehydro 34.6 42 0.0014 35.9 5.4 48 161-209 160-208 (423)
135 1zc6_A Probable N-acetylglucos 34.1 29 0.001 35.5 4.2 64 343-416 228-293 (305)
136 2zf5_O Glycerol kinase; hypert 33.9 20 0.00069 39.8 3.0 18 24-41 3-20 (497)
137 1saz_A Probable butyrate kinas 33.0 91 0.0031 33.0 8.0 50 367-416 295-348 (381)
138 3htv_A D-allose kinase, alloki 32.8 1.1E+02 0.0036 31.4 8.2 50 367-416 239-299 (310)
139 1zow_A 3-oxoacyl-[acyl-carrier 32.0 54 0.0019 33.5 5.9 47 344-393 208-254 (313)
140 1zbs_A Hypothetical protein PG 31.7 32 0.0011 35.0 3.9 68 342-416 211-280 (291)
141 2itm_A Xylulose kinase, xylulo 30.4 31 0.001 38.1 3.8 16 26-41 2-17 (484)
142 2q2r_A Glucokinase 1, putative 30.2 86 0.003 33.0 7.2 20 23-42 28-47 (373)
143 1msz_A DNA-binding protein smu 30.0 30 0.001 28.2 2.6 28 164-191 34-61 (86)
144 2x3e_A 3-oxoacyl-[acyl-carrier 29.9 62 0.0021 33.4 5.9 46 345-393 221-266 (331)
145 2d4w_A Glycerol kinase; alpha 28.4 28 0.00096 38.7 3.0 17 25-41 3-19 (504)
146 3djc_A Type III pantothenate k 26.6 37 0.0012 34.3 3.2 71 334-415 182-254 (266)
147 3epq_A Putative fructokinase; 24.5 1.2E+02 0.0042 30.8 6.9 50 367-416 224-289 (302)
148 4dfe_A 3-oxoacyl-[acyl-carrier 23.9 1.1E+02 0.0036 31.7 6.4 48 343-393 229-276 (333)
149 1ted_A PKS18; thiolase fold, s 23.4 77 0.0026 33.7 5.3 46 345-393 284-329 (393)
150 1u6e_A 3-oxoacyl-[acyl-carrier 23.0 84 0.0029 32.3 5.4 46 345-393 229-274 (335)
151 1zc6_A Probable N-acetylglucos 22.0 43 0.0015 34.2 2.8 55 162-227 77-133 (305)
152 1d7m_A Cortexillin I; coiled-c 21.7 2.3E+02 0.0078 22.9 6.1 42 725-769 17-58 (101)
153 2yhx_A Hexokinase B; transfera 21.2 2.9E+02 0.0099 30.0 9.3 23 214-236 59-81 (457)
154 3o8m_A Hexokinase; rnaseh-like 21.1 2.1E+02 0.0073 31.3 8.2 23 214-236 78-100 (485)
155 3s21_A 3-oxoacyl-[ACP] synthas 20.9 1.2E+02 0.004 31.6 6.0 49 342-393 240-288 (345)
156 2yhw_A Bifunctional UDP-N-acet 20.6 2.5E+02 0.0085 28.8 8.5 44 187-233 131-174 (343)
157 2yy0_A C-MYC-binding protein; 20.1 1.4E+02 0.0047 21.9 4.3 36 647-682 16-52 (53)
158 2wl8_A Peroxisomal biogenesis 20.1 3.2E+02 0.011 23.9 7.5 65 678-751 13-77 (126)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=6.6e-104 Score=927.73 Aligned_cols=646 Identities=27% Similarity=0.449 Sum_probs=561.1
Q ss_pred CCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
||.+||||||||||+||++ .+| +++++.|+.|+|.+||+|+|.+++++||..|..++..+|.++++++||+||+.+
T Consensus 1 Mm~~iGIDlGTtns~va~~--~~g--~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~ 76 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVA--RNR--GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDY 76 (675)
T ss_dssp -CCCEEEECCSSEEEEEEE--ETT--EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBT
T ss_pred CCcEEEEEcCCCcEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCC
Confidence 3569999999999999998 555 578999999999999999999999999999999999999999999999999966
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeC--C-CccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKID--E-NNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKG 179 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~a 179 (795)
.+........++||.++...+|.+.+.+. + ++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++
T Consensus 77 ~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a 156 (675)
T 3d2f_A 77 HHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYN 156 (675)
T ss_dssp TCTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHH
T ss_pred CcHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHH
Confidence 54333345668999999887888877654 3 25799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCceeeecchhHHHHHHhhhcC-CCC---CCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEE
Q 003782 180 LMQAAELAGMNVLSLVNEHSGAALQYGIDK-DFS---NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (795)
Q Consensus 180 l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~-~~~---~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl 255 (795)
+++|+++|||+++++|+||+|||++|++.+ .++ ..+.++||||+||||||+|++++. .+.++|+
T Consensus 157 ~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~------------~g~~~V~ 224 (675)
T 3d2f_A 157 IADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK------------KGQLKVL 224 (675)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE------------TTEEEEE
T ss_pred HHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec------------CCeEEEE
Confidence 999999999999999999999999999865 222 346899999999999999999764 6789999
Q ss_pred EeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEee
Q 003782 256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSIT 335 (795)
Q Consensus 256 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~it 335 (795)
++.|+..+||++||+.|++|+.++|.++ ++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++.++||
T Consensus 225 a~~gd~~lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~it 302 (675)
T 3d2f_A 225 GTACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLS 302 (675)
T ss_dssp EEEEETTCSHHHHHHHHHHHHHHHHHHH--TSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEE
T ss_pred EEcCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEe
Confidence 9999999999999999999999999998 88888889999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHH
Q 003782 336 RQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 336 r~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa 415 (795)
|++|+++|+++++++..+|+++|+.+++++.+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+
T Consensus 303 r~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 303 REELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK-PLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp HHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS-CEECCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCC-CccccCCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999985 677899999999999999999
Q ss_pred HhcCCccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecccEEEEEEeecCCCCCCCCCC
Q 003782 416 NLSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATS 495 (795)
Q Consensus 416 ~ls~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~~~i~i~y~~~~~~~~~~~~ 495 (795)
.+++.+++ +++.+.|++|++|||++.++.. .....+|||+|+++|++++.+|++..++.+.+.|+|++.++.+ +|
T Consensus 382 ~ls~~~~v-~~~~l~Dv~p~slgi~~~~~~~---~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~-~n 456 (675)
T 3d2f_A 382 IHSPTLRV-RPFKFEDIHPYSVSYSWDKQVE---DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPN-TP 456 (675)
T ss_dssp HTCSSCCC-CCCEEEEEECSCEEEEECCTTC---SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTT-CC
T ss_pred HhCCCCcc-cceEEEeeeecceEeeecCCCC---CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccc-cC
Confidence 99999988 8999999999999999987631 1235699999999999999999999999999989999888764 58
Q ss_pred CceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhh
Q 003782 496 PVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETA 575 (795)
Q Consensus 496 ~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (795)
..||+|.+.|||+++ +| .+.+|+|+|++|.||+|+|++++++.+.. + +
T Consensus 457 ~~lg~f~l~gi~~~~-----~g--~~~~i~v~f~id~~Gil~V~a~~~~~~~~----~--~------------------- 504 (675)
T 3d2f_A 457 EQIANWEITGVQLPE-----GQ--DSVPVKLKLRCDPSGLHTIEEAYTIEDIE----A--G------------------- 504 (675)
T ss_dssp SEEEEEEEECCCCCS-----SC--SCEEEEEEEEECTTSCEEEEEEEEECC-----------------------------
T ss_pred ceeeEEEecCcCCCC-----CC--CcceEEEEEEEcCCCcEEEEEEEEeeccc----c--c-------------------
Confidence 999999999999875 33 33389999999999999999887653110 0 0
Q ss_pred hhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHH
Q 003782 576 AQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDA 655 (795)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~ 655 (795)
+.|.+.....|+|+.. ..+||++++++|
T Consensus 505 ------------------------------------------------~~~~t~~~~~i~i~~~----~~~ls~~ei~~~ 532 (675)
T 3d2f_A 505 ------------------------------------------------SDTKTVKKDDLTIVAH----TFGLDAKKLNEL 532 (675)
T ss_dssp --------------------------------------------------CCCCEEEECEEEEE----CSSCCHHHHHHH
T ss_pred ------------------------------------------------ccccCcceeeEEEecC----CCCCCHHHHHHH
Confidence 0000111124555532 226999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHH
Q 003782 656 EAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERL 735 (795)
Q Consensus 656 ~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~ 735 (795)
++++++|..+|+.++++.++||.||+|||++|+.|++. |.++++++++++|..+|+++++|||++++++++++|++|+
T Consensus 533 ~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~ 610 (675)
T 3d2f_A 533 IEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEE--YAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKY 610 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--TGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999863 8899999999999999999999999988889999999999
Q ss_pred HHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHhcccC
Q 003782 736 DVLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQIVNDWET 778 (795)
Q Consensus 736 ~~L~~~~~~i~~r~~e~~~rp~a~~~~~~~~~~~~~~~~~~~~ 778 (795)
++|+++++||..|+.|++.||++++.|++.++.++++++.|..
T Consensus 611 ~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~ 653 (675)
T 3d2f_A 611 EELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA 653 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999954
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=3.9e-94 Score=839.57 Aligned_cols=594 Identities=22% Similarity=0.419 Sum_probs=531.7
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEe-CCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
+.+||||||||||+||++ .+| .++++.|..|++++||+|+|. ++++++|..|..++..+|.++++++||+||+.+
T Consensus 2 ~~viGIDlGTT~S~Va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~ 77 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp CCEEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBT
T ss_pred CcEEEEEcCCCcEEEEEE--ECC--EEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCC
Confidence 569999999999999999 655 468999999999999999996 568999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~ 182 (795)
.+........++||.++...++.+.+.+. ++.++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++
T Consensus 78 ~d~~v~~~~~~~p~~~~~~~~g~~~~~~~-~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 78 QDEEVQRDVSIMPFKIIAADNGDAWVEVK-GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp TSHHHHHHHTTCSSEEEECTTSBEEEEET-TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred CCHHHHHHhhcCCeEEEEcCCCceEEEEC-CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 55444445668999999988898988885 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCC
Q 003782 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (795)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~ 262 (795)
|+++|||+++++|+||+|||++|+.... ..+.++||||+||||||+|++++... ...+.++++++.++..
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~--------~~~~~~evla~~gd~~ 226 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGAFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC--CSSEEEEEEEECSSCEEEEEEEEEES--------SSCEEEEEEEEEEETT
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc--CCCCEEEEEECCCCeEEEEEEEEecC--------CCCceEEEEEecCCCC
Confidence 9999999999999999999999998762 34689999999999999999987521 1137899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHH
Q 003782 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQK 338 (795)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~----~d~~~~itr~e 338 (795)
+||.+||+.|++|+.++|..+ ++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|||++
T Consensus 227 lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~ 304 (605)
T 4b9q_A 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH--TCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHH
T ss_pred cChHHHHHHHHHHHHHHHhhh--cCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHH
Confidence 999999999999999999998 788888899999999999999999999999999999877654 67889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
|+++|+|+++++..+++++|+.+++...+|+.|+||||+||+|+|++.|+++||. ++..+.||++|||+|||++|+.++
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAai~a~~l~ 383 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS-CCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhcc-CcCCCcChhHHHHHhHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999985 678899999999999999999999
Q ss_pred CCccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCC
Q 003782 419 DGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGAT 494 (795)
Q Consensus 419 ~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~ 494 (795)
+.. +++.+.|++|++||+++.++.+ .+|||+|+++|++++.+|++.. .+.|.+ |+|++.++. +
T Consensus 384 ~~~---~~~~l~dv~p~slgie~~~g~~-------~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~--~ 450 (605)
T 4b9q_A 384 GDV---KDVLLLDVTPLSLGIETMGGVM-------TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--D 450 (605)
T ss_dssp TSS---CSEEEECBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG--G
T ss_pred CCC---CceEEEeeeeeEEEEEEcCCEE-------EEEEeCCCcCCcceEEEeeeecccCceEEEEE-Eeccccccc--c
Confidence 863 6899999999999999988765 3899999999999999998864 488999 999998876 6
Q ss_pred CCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhh
Q 003782 495 SPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAET 574 (795)
Q Consensus 495 ~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (795)
|..||+|.+.|+|+++ +| .| +|+|+|++|.||+|+|+..+..
T Consensus 451 n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~------------------------------ 492 (605)
T 4b9q_A 451 NKSLGQFNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN------------------------------ 492 (605)
T ss_dssp SEEEEEEEEECCCCCS-----TT--CC-CEEEEEEECTTSCEEEEEEETT------------------------------
T ss_pred CCEeeEEEEeCCCCCc-----CC--Cc-eEEEEEEEcCCcEEEEEEEecC------------------------------
Confidence 8999999999999986 33 56 8999999999999988644310
Q ss_pred hhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHH
Q 003782 575 AAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVD 654 (795)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~ 654 (795)
+++ ...++|+. ...||++++++
T Consensus 493 -------tg~----------------------------------------------~~~i~i~~-----~~~ls~~ei~~ 514 (605)
T 4b9q_A 493 -------SGK----------------------------------------------EQKITIKA-----SSGLNEDEIQK 514 (605)
T ss_dssp -------TCC----------------------------------------------EECCEEES-----CCSCCHHHHHH
T ss_pred -------CCc----------------------------------------------EEEEEecC-----CCCCCHHHHHH
Confidence 000 01345542 23599999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q 003782 655 AEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734 (795)
Q Consensus 655 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k 734 (795)
|.+++++|..+|++++++.++||+||+|+|++|+.|++ +.+++++++|+.|..+++++++||+.+ +.++|+++
T Consensus 515 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 4b9q_A 515 MVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHH
T ss_pred HHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999974 778999999999999999999999965 58999999
Q ss_pred HHHHHHhhhHHHHHHHh
Q 003782 735 LDVLKAIGDPVFFRFKE 751 (795)
Q Consensus 735 ~~~L~~~~~~i~~r~~e 751 (795)
+++|++.+.||..++++
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998753
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.3e-93 Score=830.76 Aligned_cols=594 Identities=23% Similarity=0.424 Sum_probs=524.4
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEe-CCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
+.+||||||||||+||++ .+| .++++.|++|.+++||+|+|. +++++||..|..+...+|.++++++||+||+.+
T Consensus 2 ~~viGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~ 77 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp --CEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBS
T ss_pred CCEEEEEcCCcCEEEEEE--ECC--EEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCC
Confidence 358999999999999999 655 568999999999999999994 578999999999999999999999999999965
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~ 182 (795)
.+.........+||.++.+.+|.+.+.+ +|+.++|+++++++|+++++.++.+++.++.++|||||+||++.||+++++
T Consensus 78 ~d~~v~~~~~~~p~~~~~~~~g~~~i~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~ 156 (605)
T 2kho_A 78 QDEEVQRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp SSTTHHHHHHHCSSCEEECTTSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred CcHHHHHHhhcCCeEEEECCCCceEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHH
Confidence 4322222334689999888888899988 457899999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCC
Q 003782 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (795)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~ 262 (795)
|++.|||+++++|+||+|||++|++... ..+.++||||+||||||+|++++.... ..+.++++++.|+..
T Consensus 157 A~~~AGl~v~~li~EP~AAAlay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~~--------~~g~~~v~a~~gd~~ 226 (605)
T 2kho_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVD--------GEKTFEVLATNGDTH 226 (605)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTTTSS--SSEEEEEEEEECSSCEEEEEEEEECTT--------TSCEEEEEEEEEESS
T ss_pred HHHHcCCceEEEecCHHHHHHHhhhccc--CCCCEEEEEECCCCeEEEEEEEEEecC--------CCCeEEEEEECCCCC
Confidence 9999999999999999999999998652 246899999999999999999774210 147899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHH
Q 003782 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQK 338 (795)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~----~d~~~~itr~e 338 (795)
+||.+||+.|++|+.++|+++ ++.++..+++++.+|+.+||++|+.||.+.++.+.++++.++ .++.++|||++
T Consensus 227 lGG~d~D~~l~~~l~~~~~~~--~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~ 304 (605)
T 2kho_A 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp CSGGGTHHHHHHHHHHHHHHH--HSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHH
Confidence 999999999999999999988 777888899999999999999999999999999999887653 56788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
|+++|+|+++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.++
T Consensus 305 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~-~~~~~~npd~aVA~GAa~~a~~l~ 383 (605)
T 2kho_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCC-CcCcCCCcchHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999985 677899999999999999999998
Q ss_pred CCccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCC
Q 003782 419 DGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGAT 494 (795)
Q Consensus 419 ~~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~ 494 (795)
+. + +++.+.|++|++||+++.++.+ .+|||+|+++|++++..|++.. .+.|.+ |+|++.++. +
T Consensus 384 ~~--~-~~~~l~dv~p~slgi~~~~g~~-------~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~--~ 450 (605)
T 2kho_A 384 GD--V-KDVLLLDVTPLSLGIETMGGVM-------TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--D 450 (605)
T ss_dssp TS--C-CCCCCSBCCCCCEEEEETTTEE-------EEEECTTBCSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG--G
T ss_pred CC--c-cCceEEeeeeeeccccccCCce-------EEEEecccccCccceEEEEecCCCceEEEEEE-EeccCcccc--c
Confidence 75 4 7889999999999999988765 3899999999999999998754 488999 999988876 5
Q ss_pred CCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhh
Q 003782 495 SPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAET 574 (795)
Q Consensus 495 ~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (795)
|..||+|.+.|+|+++ +| .| .|+|+|++|.||+|+|+..+.. +
T Consensus 451 n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~--------------------------t--- 493 (605)
T 2kho_A 451 NKSLGQFNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN--------------------------S--- 493 (605)
T ss_dssp SEEEEEEEEECCCSCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT--------------------------T---
T ss_pred CcEEeEEEecCCCCCC-----CC--Cc-EEEEEEEEcCCCceeEEEEEcC--------------------------C---
Confidence 8999999999999875 33 56 8999999999999987643200 0
Q ss_pred hhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHH
Q 003782 575 AAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVD 654 (795)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~ 654 (795)
+ + ...++++. ..+||++++++
T Consensus 494 --------g------------------------------------------~----~~~i~i~~-----~~~ls~~~i~~ 514 (605)
T 2kho_A 494 --------G------------------------------------------K----EQKITIKA-----SSGLNEDEIQK 514 (605)
T ss_dssp --------C------------------------------------------C----EEEEEECT-----TSSCCHHHHHH
T ss_pred --------C------------------------------------------c----eeeccccc-----ccCCCHHHHHH
Confidence 0 0 01345541 24699999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q 003782 655 AEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734 (795)
Q Consensus 655 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k 734 (795)
|++++++|..+|+.++++.++||+||+|+|++|+.|++ +.+++++++|+.|.++++++++||+++ ++++|+++
T Consensus 515 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 2kho_A 515 MVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999964 788999999999999999999999843 79999999
Q ss_pred HHHHHHhhhHHHHHHHh
Q 003782 735 LDVLKAIGDPVFFRFKE 751 (795)
Q Consensus 735 ~~~L~~~~~~i~~r~~e 751 (795)
+++|+++++||..|++.
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998753
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=7.3e-87 Score=771.16 Aligned_cols=545 Identities=30% Similarity=0.532 Sum_probs=482.2
Q ss_pred CCCCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCC
Q 003782 21 HSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGK 100 (795)
Q Consensus 21 ~~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~ 100 (795)
|+++.+||||||||||+||++ .+| +++++.|+.|+|++||+|+|.+++++||..|..++..+|.++++++||+||+
T Consensus 1 M~m~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~ 76 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGR 76 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEE--CSS--SEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTC
T ss_pred CCCCCEEEEEeCcccEEEEEE--ECC--EEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCC
Confidence 456779999999999999999 555 6789999999999999999998899999999999999999999999999999
Q ss_pred CChhhHhhHhhcCCCceEEECCCCcEEEEe--CCC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHH
Q 003782 101 PFKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAER 177 (795)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR 177 (795)
.+.+........++||.++.. +|.+.+.+ .++ +.++|+++++++|+++++.++.+++.++.++|||||++|++.||
T Consensus 77 ~~~d~~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr 155 (554)
T 1yuw_A 77 RFDDAVVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQR 155 (554)
T ss_dssp CSSCSHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHH
T ss_pred CCCcHHHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHH
Confidence 654433333456799998853 56655554 332 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEe
Q 003782 178 KGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDV 257 (795)
Q Consensus 178 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~ 257 (795)
+++++|++.|||+++++++||+|||++|+..+.. ..+.++||||+||||||++++++. ++.++++++
T Consensus 156 ~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~ 222 (554)
T 1yuw_A 156 QATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV-GAERNVLIFDLGGGTFDVSILTIA------------AGIFEVKST 222 (554)
T ss_dssp HHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-SSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-CCCcEEEEEEcCCCeEEEEEEEEc------------CCcEEEEEE
Confidence 9999999999999999999999999999987532 235889999999999999999764 678999999
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHH
Q 003782 258 RWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQ 337 (795)
Q Consensus 258 ~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~ 337 (795)
.++..+||.+||+.|++|+.++|.++ ++.++..+++++.+|+.+||++|+.||...++.+.+++++++.++...|+|+
T Consensus 223 ~g~~~lGG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~ 300 (554)
T 1yuw_A 223 AGDTHLGGEDFDNRMVNHFIAEFKRK--HKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300 (554)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHHH--TSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHH
Confidence 99999999999999999999999998 7888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHh
Q 003782 338 KFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (795)
Q Consensus 338 efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~l 417 (795)
+|+++++++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.|+..++..+.||++|||+|||++|+.+
T Consensus 301 ~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l 380 (554)
T 1yuw_A 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 380 (554)
T ss_dssp HHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999986678889999999999999999999
Q ss_pred cC--CccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeec----ccEEEEEEeecCCCCCC
Q 003782 418 SD--GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHA----KDFEVSLAYESEDLLPP 491 (795)
Q Consensus 418 s~--~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~----~~~~i~i~y~~~~~~~~ 491 (795)
++ .+++ +++.+.|++|++||+++.++.+ .+|||+|+++|++++.+|.+. ..+.|.+ |+|++.++.
T Consensus 381 ~~~~~~~~-~~~~~~dv~p~slgi~~~~g~~-------~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v-~~ge~~~~~ 451 (554)
T 1yuw_A 381 SGDKSENV-QDLLLLDVTPLSLGIETAGGVM-------TVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQV-YEGERAMTK 451 (554)
T ss_dssp TSCCCCCT-TSSCCCCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCSEEEEEE-EESSSSBGG
T ss_pred cCCccccc-cceEEEEeeeeEEEEEecCceE-------EEEEECCCccCceeEEEeeeccCCCceEEEEE-EecCccccc
Confidence 87 4667 8899999999999999987754 389999999999999999875 3488999 999988776
Q ss_pred CCCCCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCc
Q 003782 492 GATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNIS 571 (795)
Q Consensus 492 ~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (795)
+|..||+|.+.|+|+.+ +| .| +|+|+|++|.||+|+|+..+.. +
T Consensus 452 --~n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~--------------------------t 495 (554)
T 1yuw_A 452 --DNNLLGKFELTGIPPAP-----RG--VP-QIEVTFDIDANGILNVSAVDKS--------------------------T 495 (554)
T ss_dssp --GSEEEEEEEEECCCCCS-----TT--CC-CEEEEEEECTTCCEEEEEEETT--------------------------T
T ss_pred --cCcEEEEEEEeCCCCCc-----cc--cc-EEEEEEEEccCceEEEEEEecc--------------------------C
Confidence 58999999999999876 33 56 8999999999999987643200 0
Q ss_pred hhhhhhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHH
Q 003782 572 AETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEA 651 (795)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~ 651 (795)
+ + ...++++. ...+||+++
T Consensus 496 -----------g------------------------------------------~----~~~~~i~~----~~~~ls~~~ 514 (554)
T 1yuw_A 496 -----------G------------------------------------------K----ENKITITN----DKGRLSKED 514 (554)
T ss_dssp -----------C------------------------------------------C----EEEEEECC----CSSCSCHHH
T ss_pred -----------C------------------------------------------C----ceeEEEec----CCCCCCHHH
Confidence 0 0 01345542 134699999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhcc
Q 003782 652 LVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (795)
Q Consensus 652 ~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~ 691 (795)
++++++++++|..+|++++++.++||+||+|+|++|+.|+
T Consensus 515 i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~ 554 (554)
T 1yuw_A 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVE 554 (554)
T ss_dssp HHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCCC
T ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999873
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.3e-77 Score=688.65 Aligned_cols=500 Identities=27% Similarity=0.499 Sum_probs=438.3
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCCh
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (795)
+.+||||||||||+||++ .+| .++++.|+.|.+++||+|+|.+++++||..|..+...+| +++.++||+||+++
T Consensus 2 ~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~- 75 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVL--EGG--EVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY- 75 (509)
T ss_dssp CCEEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC-
T ss_pred CCEEEEEcCCceEEEEEE--ECC--EEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc-
Confidence 469999999999999999 555 468999999999999999998889999999999999999 99999999999832
Q ss_pred hhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHHH
Q 003782 104 QVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQA 183 (795)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~A 183 (795)
. +.+ +|..++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|
T Consensus 76 -------------~----------~~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a 131 (509)
T 2v7y_A 76 -------------K----------VEI-EGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA 131 (509)
T ss_dssp -------------C----------EEE-TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred -------------E----------EEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 1 122 3356899999999999999999999998899999999999999999999999
Q ss_pred HHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCC
Q 003782 184 AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAEL 263 (795)
Q Consensus 184 a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~l 263 (795)
++.||++++++++||+|||++|+... ..+.++||||+||||||++++++. .+.++++++.++..+
T Consensus 132 ~~~AGl~~~~li~Ep~AAAlay~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~~g~~~l 196 (509)
T 2v7y_A 132 GRIAGLEVERIINEPTAAALAYGLDK---EEDQTILVYDLGGGTFDVSILELG------------DGVFEVKATAGDNHL 196 (509)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTGGG---SCSEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEETTC
T ss_pred HHHcCCCeEEEecCHHHHHHHHhhcc---CCCCEEEEEECCCCeEEEEEEEEc------------CCeEEEEEecCCCCc
Confidence 99999999999999999999999876 246899999999999999999664 578999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHHH
Q 003782 264 GGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQKF 339 (795)
Q Consensus 264 GG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~----~d~~~~itr~ef 339 (795)
||.+||+.|++|+.++|+.+ ++.++..+++++.+|+.+||++|+.||...+..+.++++.++ .++.++|||++|
T Consensus 197 GG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f 274 (509)
T 2v7y_A 197 GGDDFDQVIIDYLVNQFKQE--HGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF 274 (509)
T ss_dssp SHHHHHHHHHHHHHHHHHHH--HSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHH
Confidence 99999999999999999988 677777889999999999999999999999999999877652 467789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhcC
Q 003782 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (795)
Q Consensus 340 e~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (795)
+++++|+++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.+++
T Consensus 275 e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~-~~~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 275 EELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGK-EPHKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp HHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSS-CCBCCSCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCC-CcCcCCCchhhhHhhHHHHHHHhcC
Confidence 999999999999999999999999989999999999999999999999999985 6778999999999999999999987
Q ss_pred CccccCcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCCC
Q 003782 420 GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATS 495 (795)
Q Consensus 420 ~~~~~~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~ 495 (795)
. + +++.+.|++|++||+++.++.+ .+|||+|+++|++++..|.+.. .+.|.+ |+|++.++. +|
T Consensus 354 ~--~-~~~~~~dv~p~slgi~~~~~~~-------~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v-~~ge~~~~~--~~ 420 (509)
T 2v7y_A 354 E--V-KDVVLLDVTPLSLGIETMGGVF-------TKLIERNTTIPTSKSQVFTTAADNQTTVDIHV-LQGERPMAA--DN 420 (509)
T ss_dssp C--C-CCCCCCCBCSSEEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EEESSSBGG--GS
T ss_pred C--c-cCceEEEeeccccceeecCCce-------EEEEeCCCcCCcceEEEEEeeccCcEEEEEEE-EecCccccc--cC
Confidence 5 3 6789999999999999987755 3899999999999999998753 488999 999988766 58
Q ss_pred CceeEEEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhh
Q 003782 496 PVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETA 575 (795)
Q Consensus 496 ~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (795)
..||+|.+.|+|+.+ +| .| +|+|+|++|.||+|+|+..+.. +
T Consensus 421 ~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~--------------------------~---- 462 (509)
T 2v7y_A 421 KSLGRFQLTGIPPAP-----RG--VP-QIEVTFDIDANGIVHVRAKDLG--------------------------T---- 462 (509)
T ss_dssp EEEEEEEEECCCCCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT--------------------------T----
T ss_pred cEEEEEEEeCCCCCC-----Cc--cc-EEEEEEEEcCCceEEEEEEEcC--------------------------C----
Confidence 999999999999875 33 56 8999999999999987643200 0
Q ss_pred hhccccccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHH
Q 003782 576 AQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDA 655 (795)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~ 655 (795)
+ + ...++++. ...||+++++++
T Consensus 463 -------g------------------------------------------~----~~~~~i~~-----~~~l~~~~i~~~ 484 (509)
T 2v7y_A 463 -------N------------------------------------------K----EQSITIKS-----SSGLSEEEIQRM 484 (509)
T ss_dssp -------C------------------------------------------C----EEEEEECS-----SCSCCSHHHHHH
T ss_pred -------C------------------------------------------c----EEEEEEEe-----cCCCCHHHHHHH
Confidence 0 0 01345542 246999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhh
Q 003782 656 EAKLEELDKKDADRRRTAELKNNLE 680 (795)
Q Consensus 656 ~~~~~~~~~~D~~~~~~~~akN~LE 680 (795)
.+++++|..+|++++++.++||+||
T Consensus 485 ~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 485 IKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHHHHSCGGGGGGGGCCCC-----
T ss_pred HHHHHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.3e-61 Score=542.54 Aligned_cols=379 Identities=32% Similarity=0.566 Sum_probs=343.2
Q ss_pred CCCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCC
Q 003782 22 SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKP 101 (795)
Q Consensus 22 ~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~ 101 (795)
..+.+||||||||||+||++ .+| .++++.|+.|++++||+|+|.+++++||..|..+..++|.++++++|++||++
T Consensus 21 ~~~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~ 96 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRK 96 (404)
T ss_dssp --CCCEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCC
T ss_pred ccCCEEEEEcCCccEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCC
Confidence 45679999999999999999 655 57899999999999999999988999999999999999999999999999997
Q ss_pred ChhhHhhHhhcCCCceEEECCCCcEEEEe--CCC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHH
Q 003782 102 FKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERK 178 (795)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~ 178 (795)
+.+.........+||.+... ++...+.+ .+. ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+
T Consensus 97 ~~~~~~~~~~~~~p~~~~~~-~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~ 175 (404)
T 3i33_A 97 FEDATVQSDMKHWPFRVVSE-GGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQ 175 (404)
T ss_dssp TTSHHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHHhhCCceEEcc-CCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHH
Confidence 65544444556799998863 45555544 332 679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeeecchhHHHHHHhhhcCCCC-CCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEe
Q 003782 179 GLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFS-NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDV 257 (795)
Q Consensus 179 al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~-~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~ 257 (795)
++++|++.||++++.+++||+|||++|+...... ..+..++|||+||||||++++++. .+.++++++
T Consensus 176 ~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~------------~~~~~v~~~ 243 (404)
T 3i33_A 176 ATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIE------------DGIFEVKST 243 (404)
T ss_dssp HHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEE------------TTEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEe------------CCeEEEEEE
Confidence 9999999999999999999999999998876422 146899999999999999999764 678999999
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHH
Q 003782 258 RWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQ 337 (795)
Q Consensus 258 ~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~ 337 (795)
.++..+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||.+....+.++.+.++.++.+.|+|+
T Consensus 244 ~~~~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~ 321 (404)
T 3i33_A 244 AGDTHLGGEDFDNRMVSHLAEEFKRK--HKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA 321 (404)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHH
Confidence 99999999999999999999999988 7788888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHh
Q 003782 338 KFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (795)
Q Consensus 338 efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~l 417 (795)
+|+++++++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+..++..+.||++|||+|||++|+.+
T Consensus 322 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 322 RFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999966688889999999999999999998
Q ss_pred cC
Q 003782 418 SD 419 (795)
Q Consensus 418 s~ 419 (795)
++
T Consensus 402 ~~ 403 (404)
T 3i33_A 402 IG 403 (404)
T ss_dssp C-
T ss_pred cC
Confidence 75
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.4e-61 Score=540.88 Aligned_cols=379 Identities=23% Similarity=0.381 Sum_probs=336.8
Q ss_pred CCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
.+.+||||||||||+||++ .+| +++++.|..|.+++||+|+|.+++++||..|..+..++|.+++.++|++||+++
T Consensus 12 ~~~vvGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~ 87 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHT--VDD--KAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDF 87 (409)
T ss_dssp -CCEEEEEECSSEEEEEEE--ETT--EEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCG
T ss_pred CCcEEEEEcCCCeEEEEEE--eCC--ceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCc
Confidence 3579999999999999998 544 689999999999999999999999999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCC-------ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDEN-------NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQA 175 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~ 175 (795)
.+..... ..+++.+. ..+|.+.+.+..+ ..++|+++++++|+++++.++.+++.++.++|||||++|++.
T Consensus 88 ~~~~~~~--~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~ 164 (409)
T 4gni_A 88 KSVDPTH--NHASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEK 164 (409)
T ss_dssp GGCCCGG--GTTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred cchhhhh--hcccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 5543222 23344443 2367788877542 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEE
Q 003782 176 ERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (795)
Q Consensus 176 qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl 255 (795)
||+++++|++.|||+++.+++||+|||++|+........+..+||||+||||||++++++. .+.++++
T Consensus 165 ~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~------------~~~~~v~ 232 (409)
T 4gni_A 165 QKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASR------------SGMYTIL 232 (409)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEE------------TTEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEe------------CCeEEEE
Confidence 9999999999999999999999999999998764223456899999999999999999764 6789999
Q ss_pred EeccCCCCchHHHHHHHHHHHHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEE
Q 003782 256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNG--VDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSS 333 (795)
Q Consensus 256 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~ 333 (795)
++.++..+||.+||+.|++++.++|..+ ++ .++..+++.+.+|+.+||++|+.||.+..+.+.++++.++.++...
T Consensus 233 ~~~~~~~lGG~~~d~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~ 310 (409)
T 4gni_A 233 ATVHDYEYHGIALDKVLIDHFSKEFLKK--NPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFAST 310 (409)
T ss_dssp EEEEESSSSHHHHHHHHHHHHHHHHHHH--STTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEE
T ss_pred EecCCCCcCHHHHHHHHHHHHHHHHHHH--hCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEE
Confidence 9999999999999999999999999988 66 7778889999999999999999999999999999999999999999
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC-cc------CCCCCcchhh
Q 003782 334 ITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-EL------DRHLDADEAI 406 (795)
Q Consensus 334 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~-~i------~~~~n~deaV 406 (795)
|||++|+++++++++++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.|+.. .+ ....||++||
T Consensus 311 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~av 390 (409)
T 4gni_A 311 INRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQ 390 (409)
T ss_dssp EEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999875 34 6789999999
Q ss_pred HhhHHHHHHHhcCCcc
Q 003782 407 VLGASLLAANLSDGIK 422 (795)
Q Consensus 407 a~GAa~~aa~ls~~~~ 422 (795)
|+|||++|+......+
T Consensus 391 a~GAa~~~~~~~~~~~ 406 (409)
T 4gni_A 391 ARGAALQASLIQEHHH 406 (409)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHhhhhhhhhc
Confidence 9999999998776543
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5.4e-60 Score=527.69 Aligned_cols=374 Identities=34% Similarity=0.592 Sum_probs=341.1
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCCh
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (795)
..+||||||||||+||++ .+| .++++.|..|++++||+|+|.++++++|..|......+|.++++++|++||+++.
T Consensus 18 ~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~ 93 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVM--KNG--KTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYN 93 (394)
T ss_dssp CSCEEEEECSSEEEEEEE--CSS--CEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTT
T ss_pred CCEEEEEeCcCcEEEEEE--ECC--eeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCC
Confidence 568999999999999999 655 5789999999999999999999999999999999999999999999999999765
Q ss_pred hhHhhHhhcCCCceEEECCCCcEEEEeC--CC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHH
Q 003782 104 QVKHLIDSLYLPFNVVEDSRGAVSFKID--EN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (795)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (795)
+.........+||.+. +.++...+.+. +. ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++
T Consensus 94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 172 (394)
T 3qfu_A 94 DRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQAT 172 (394)
T ss_dssp CHHHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHH
Confidence 4444445567999987 34555555543 32 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccC
Q 003782 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (795)
Q Consensus 181 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~ 260 (795)
++|++.||++++.+++||+|||++|+... ...+..++|||+||||||++++++. .+.+++++..++
T Consensus 173 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--~~~~~~vlV~D~Gggt~dvsv~~~~------------~~~~~~~~~~~~ 238 (394)
T 3qfu_A 173 KDAGTIAGLNVLRIVNEPTAAAIAYGLDK--SDKEHQIIVYDLGGGTFDVSLLSIE------------NGVFEVQATSGD 238 (394)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTTTS--CSSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEE
T ss_pred HHHHHHcCCceEEEecCHHHHHHHHhhcc--CCCCceEEEEEcCCCceeEEEEEEe------------CCEEEEEEEcCC
Confidence 99999999999999999999999998765 2346899999999999999999764 678999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHHH
Q 003782 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFE 340 (795)
Q Consensus 261 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe 340 (795)
..+||.+||+.|++++.++|.++ ++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+
T Consensus 239 ~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~ 316 (394)
T 3qfu_A 239 THLGGEDFDYKIVRQLIKAFKKK--HGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFE 316 (394)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHH--cCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHH
Confidence 99999999999999999999998 7788888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 341 ~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
++++++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+..++..+.||++|||+|||++|+.++
T Consensus 317 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 317 ELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999666888899999999999999999875
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=5.9e-59 Score=517.13 Aligned_cols=377 Identities=28% Similarity=0.508 Sum_probs=333.0
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEe-CCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
+.+||||||||||+||++ .+| .++++.|++|.+++||+|+|. +++++||..|.....++|.++++++|++||+.+
T Consensus 2 ~~~vGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~ 77 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (383)
T ss_dssp -CCCEEECCSSEEEEEEE--ETT--EEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBS
T ss_pred CcEEEEEcCCCCEEEEEE--ECC--eeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCC
Confidence 358999999999999999 555 568899999999999999995 578999999999999999999999999999965
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~ 182 (795)
.+.........+||.+..+.++.+.+.+ +|+.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++
T Consensus 78 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 156 (383)
T 1dkg_D 78 QDEEVQRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (383)
T ss_dssp CSHHHHHHTTTCSSEEEECSSSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHH
T ss_pred CcHHHHHHhhcCCeEEEEcCCCcEEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 4322223345689999888788888888 456899999999999999999999988888999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCC
Q 003782 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (795)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~ 262 (795)
|++.||++++.+++||+|||++|+.... ..+..+||||+||||||++++++... ...+.++++++.++..
T Consensus 157 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~--------~~~~~~~v~~~~~~~~ 226 (383)
T 1dkg_D 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (383)
T ss_dssp HHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC------------CCCEEEEEEEESS
T ss_pred HHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEEEEEec--------CCCCeEEEEEEeCCCC
Confidence 9999999999999999999999987642 24679999999999999999976421 0135678888889889
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeeccc---C-cceEEEeeHHH
Q 003782 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYV---D-IDFRSSITRQK 338 (795)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~---~-~d~~~~itr~e 338 (795)
+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||......+.++.+.+ + .++.++|+|++
T Consensus 227 lGG~~id~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~ 304 (383)
T 1dkg_D 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (383)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH--HCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHH
Confidence 999999999999999999888 67778788999999999999999999999888888887664 2 45678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
|+++++|+++++..+++++|+.+++...+|+.|+|+||+|++|+|++.|++.|+. ++..+.||++|||+|||++|+.++
T Consensus 305 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 305 LESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCC-CCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999888999999999999999999999999985 677889999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=6.9e-40 Score=358.25 Aligned_cols=311 Identities=20% Similarity=0.273 Sum_probs=239.5
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCC--cE-EEcHhHHHHHhhCcchhhhhhhhhcCC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHES--TR-LLGEEASGIIARYPHRVYSQLRDMIGK 100 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~K~llG~ 100 (795)
+.+|||||||+||++++. +. + .+ . .+||+|+|.++ ++ ++|.+|..+..++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~----~~-~-~~-~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLR----GK-G-IV-V------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEET----TT-E-EE-E------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-------
T ss_pred CceEEEEcCcCcEEEEEC----CC-C-EE-E------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-------
Confidence 368999999999999875 32 2 22 2 27999999754 44 79999988776666654210
Q ss_pred CChhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHH
Q 003782 101 PFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (795)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al 180 (795)
.|++ +|. +. ....++++++++|++++.. ..++ ...+|||||++|++.||+++
T Consensus 63 -------------~p~~-----~g~----i~--~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 63 -------------RPMR-----DGV----IA--DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp -------------CCEE-----TTE----ES--SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred -------------ecCC-----CCe----eC--ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 1111 121 11 1234677777777766542 1233 36899999999999999999
Q ss_pred HHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccC
Q 003782 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (795)
Q Consensus 181 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~ 260 (795)
++|++.||++++.+++||+|||++|+... ..+..++|||+||||||+++++.. .+ + ..++
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~---~~~~~~lVvDiGggttdvsv~~~~--------------~~--~-~~~~ 174 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNV---EEPSGNMVVDIGGGTTEVAVISLG--------------SI--V-TWES 174 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCT---TSSSCEEEEEECSSCEEEEEEETT--------------EE--E-EEEE
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCC---CCCceEEEEEeCCCeEEEEEEEcC--------------CE--E-eeCC
Confidence 99999999999999999999999998754 345789999999999999999642 11 1 2345
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCc------eeEEEe--ecccCcceEE
Q 003782 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTM------APISVE--SLYVDIDFRS 332 (795)
Q Consensus 261 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~------~~i~i~--~l~~~~d~~~ 332 (795)
..+||.+||+.|.+++.+++... +. +..||++|+.|+.... ..+.++ ++.++.++.+
T Consensus 175 ~~lGG~~id~~l~~~l~~~~~~~------~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (344)
T 1jce_A 175 IRIAGDEMDEAIVQYVRETYRVA------IG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKL 239 (344)
T ss_dssp ESCSHHHHHHHHHHHHHHHHCEE------CC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEE
T ss_pred CCccChhHHHHHHHHHHHHhCcc------cC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeE
Confidence 68999999999999998876322 21 4689999999987643 234443 4557777889
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCc-cEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhh
Q 003782 333 SITRQKFEELCEDLWERSLVPLREVLNYSGLK--MDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLG 409 (795)
Q Consensus 333 ~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~--~~~i-~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~G 409 (795)
+|+|++|+++++|.++++.++|.++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+. ++....||++|||+|
T Consensus 240 ~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~G 318 (344)
T 1jce_A 240 TLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI-SVIRSEEPLTAVAKG 318 (344)
T ss_dssp EEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS-CEEECSSTTTHHHHH
T ss_pred EEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC-CccccCChHHHHHHH
Confidence 99999999999999999999999999987532 2234 6899999999999999999999985 566788999999999
Q ss_pred HHHHHHHhc
Q 003782 410 ASLLAANLS 418 (795)
Q Consensus 410 Aa~~aa~ls 418 (795)
|+++|+.++
T Consensus 319 aa~~a~~~~ 327 (344)
T 1jce_A 319 AGMVLDKVN 327 (344)
T ss_dssp HHHGGGCHH
T ss_pred HHHHHhChH
Confidence 999998665
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.97 E-value=2.2e-30 Score=260.43 Aligned_cols=211 Identities=12% Similarity=0.239 Sum_probs=182.0
Q ss_pred eeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCCCCceeEEEE
Q 003782 428 GMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAV 503 (795)
Q Consensus 428 ~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~~~i 503 (795)
.+.|++|+++||++.++.+ .+|||+|++||++++.+|++.. .+.|.| |+|++.++. +|..||+|.|
T Consensus 2 ~l~DV~p~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~Lg~f~l 71 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVM-------TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQFNL 71 (219)
T ss_dssp CCCCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEE
T ss_pred eEEEecCcEEEEEEeCCEE-------EEEEeCcCcccEeEEEEEEeCCCCCceEEEEE-EEcCCcccc--cCCEEEEEEE
Confidence 5789999999999998765 3999999999999999998865 499999 999998876 6999999999
Q ss_pred cCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhcccccc
Q 003782 504 SGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEA 583 (795)
Q Consensus 504 ~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (795)
.|||+++ +| .| .|+|+|++|.||+|+|+..+.. ++
T Consensus 72 ~gipp~p-----~G--~~-~IeVtf~iD~nGiL~V~a~d~~-------------------------------------tg 106 (219)
T 4e81_A 72 DGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN-------------------------------------SG 106 (219)
T ss_dssp ECCCCCS-----TT--CS-CEEEEEEECTTCCEEEEEEETT-------------------------------------TC
T ss_pred eCCCCCC-----CC--Cc-eEEEEEEeCCCCCEeeeeeccc-------------------------------------cC
Confidence 9999886 34 56 8999999999999987644310 00
Q ss_pred ccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhH
Q 003782 584 NENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELD 663 (795)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~ 663 (795)
+ ...++|+. ...||++++++|++++++|.
T Consensus 107 ~----------------------------------------------~~~i~I~~-----~~~Ls~eeI~~m~~~a~~~~ 135 (219)
T 4e81_A 107 K----------------------------------------------EQKITIKA-----SSGLNEDEIQKMVRDAEANA 135 (219)
T ss_dssp C----------------------------------------------EEEEEECT-----TCSCCHHHHHHHHHHHHHTH
T ss_pred c----------------------------------------------cceEeeec-----cccccHHHHHHHHHHHHHhh
Confidence 0 01456542 23599999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhh
Q 003782 664 KKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGD 743 (795)
Q Consensus 664 ~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~ 743 (795)
.+|+.++++.++||.||+|||++|+.|++ +..++++++++.|...++++++||+++ ++++|++++++|++++.
T Consensus 136 ~eD~~~r~~~e~kn~le~~i~~~~~~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~ 208 (219)
T 4e81_A 136 EADRKFEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQ 208 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999974 778999999999999999999999976 69999999999999999
Q ss_pred HHHHHHHh
Q 003782 744 PVFFRFKE 751 (795)
Q Consensus 744 ~i~~r~~e 751 (795)
||..|+.+
T Consensus 209 ~i~~~~~~ 216 (219)
T 4e81_A 209 KLMEIAQQ 216 (219)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99999776
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.96 E-value=7.7e-29 Score=251.87 Aligned_cols=210 Identities=13% Similarity=0.189 Sum_probs=179.1
Q ss_pred EecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCCCCceeEEEEcC
Q 003782 430 VDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAVSG 505 (795)
Q Consensus 430 ~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~~~i~~ 505 (795)
.|++|++|||++.++.+ .+|||+|++||++++.+|++.. .+.|.+ |+|++.++. +|..||+|.|.|
T Consensus 1 ~Dv~p~slGie~~~g~~-------~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~Lg~f~l~g 70 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLV-------EKVIPRNTTIPVARAQDFTTFKDGQTAMSIHV-MQGERELVQ--DCRSLARFALRG 70 (227)
T ss_dssp CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEECSSTTCCCEEEEE-EECSSSBGG--GSEEEEEEEECC
T ss_pred CCcccceEEEEEeCCEE-------EEEEeCcCccCceEEEEEEecCCCceEEEEEE-EecCCccCC--CCCEEEEEEEeC
Confidence 38999999999988755 3899999999999999999864 489999 999988876 589999999999
Q ss_pred CccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhcccccccc
Q 003782 506 LAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANE 585 (795)
Q Consensus 506 i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (795)
|++++ +| .| +|+|+|++|.||+|+|+..+.. + +
T Consensus 71 i~~~p-----~G--~~-~I~Vtf~iD~nGiL~V~a~d~~--------------------------t-----------g-- 103 (227)
T 1u00_A 71 IPALP-----AG--GA-HIRVTFQVDADGLLSVTAMEKS--------------------------T-----------G-- 103 (227)
T ss_dssp CCCCS-----TT--CS-CEEEEEEECTTCCEEEEEEETT--------------------------T-----------C--
T ss_pred CCCCC-----CC--ce-EEEEEEEECCCCcEEEEeeccc--------------------------c-----------c--
Confidence 99876 34 56 8999999999999988644200 0 0
Q ss_pred ccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHHH
Q 003782 586 NLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKK 665 (795)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~ 665 (795)
+ ...++|+. ..+||+++++++.+++++|..+
T Consensus 104 ----------------------------------------~----~~~i~i~~-----~~~Ls~eei~~~~~~~~~~~~~ 134 (227)
T 1u00_A 104 ----------------------------------------V----EASIQVKP-----SYGLTDSEIASMIKDSMSYAEQ 134 (227)
T ss_dssp ----------------------------------------C----EEEEEECC-----CSCCCHHHHHHHHHHHHHTHHH
T ss_pred ----------------------------------------c----cceEEEEe-----ccCCCHHHHHHHHHHHHhhhcc
Confidence 0 01455542 2359999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHH
Q 003782 666 DADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPV 745 (795)
Q Consensus 666 D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i 745 (795)
|+.++++.++||.||+|||++|+.|++ +..++++++++.|..+|+++++|||.+ ++++|++++++|++++.||
T Consensus 135 D~~~~e~~e~kn~le~~i~~~~~~l~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i 207 (227)
T 1u00_A 135 DVKARMLAEQKVEAARVLESLHGALAA---DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDF 207 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999974 678899999999999999999999944 5899999999999999999
Q ss_pred HHHHHhh
Q 003782 746 FFRFKEL 752 (795)
Q Consensus 746 ~~r~~e~ 752 (795)
..|+...
T Consensus 208 ~~r~~~~ 214 (227)
T 1u00_A 208 AARRMDQ 214 (227)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987643
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.94 E-value=9.1e-27 Score=253.48 Aligned_cols=231 Identities=19% Similarity=0.152 Sum_probs=168.2
Q ss_pred ccHHHHHHHHHHHHHHHHHhhcCCCCCcEE--EecCCCCCHHHHHHHHHHHHHh--------C------CceeeecchhH
Q 003782 136 FSVEELLAMVLSYAVNLVDTHAKLAVKDFV--ISVPPYFGQAERKGLMQAAELA--------G------MNVLSLVNEHS 199 (795)
Q Consensus 136 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--ItVPa~f~~~qR~al~~Aa~~A--------G------l~~~~li~Ep~ 199 (795)
+..+...++++..|++.++.....+ .++| |+||++|+..||+++++|+..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 4446777788887776653232333 4699 9999999999999999997765 4 34588999999
Q ss_pred HHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHH
Q 003782 200 GAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (795)
Q Consensus 200 AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~ 279 (795)
|||++|.......+....++|||+||||||++++++. ++. .+....++..+||.+|++.|.+++.++
T Consensus 174 AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~------------~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 174 GAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLM------------DME-PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp HHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETT------------TTE-ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccCCcEEEEECCCCcEEEEEEEec------------CCE-EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999983222222334789999999999999999542 343 344445677899999999999888776
Q ss_pred HhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHH-HHHHHHHHHHHHHHHHHHH
Q 003782 280 FNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKF-EELCEDLWERSLVPLREVL 358 (795)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l 358 (795)
+... .++. ...++ . ...+.+ .+. .++++++ +++++++++++.+.++++|
T Consensus 241 ~g~~----~~i~---------~~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l 290 (346)
T 2fsj_A 241 TGFV----VPFD---------LAQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNL 290 (346)
T ss_dssp HCCC----CCHH---------HHHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC----cCCC---------HHHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5310 0211 11122 1 112222 233 3569999 9999999999999999999
Q ss_pred HHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCcc-CCCCCcchhhHhhHHHHHH
Q 003782 359 NYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTEL-DRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 359 ~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i-~~~~n~deaVa~GAa~~aa 415 (795)
+.+ .++++.|+|+||++++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 291 ~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 291 RGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred Hhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 876 5678999999999999 99999999974332 2267999999999998754
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=3.4e-25 Score=244.94 Aligned_cols=299 Identities=16% Similarity=0.183 Sum_probs=191.4
Q ss_pred CCcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
...++|||+||++++++++ ..| .+.+ +..|.+.+|+... .++ ...++..+...+|+++++..
T Consensus 12 ~~~~vgiDiGt~~i~~~~~--~~~--~~~i--~~~g~~~~ps~~~-~~g-----------~i~d~~~~~~~ik~~~~~~~ 73 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEV--SGN--PPAL--KALASRPTPPGLL-MEG-----------MVAEPAALAQEIKELLLEAR 73 (377)
T ss_dssp CCCCEEEEECSSEEEEEEE--ETT--TTEE--EEEEEEECCTTSE-ETT-----------EESCHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCeEEEEEE--eCC--ceEE--EEEEeEECCCCcc-cCC-----------CcCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999998 544 2223 3335556666432 222 23567778888888887510
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHH------
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAE------ 176 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~q------ 176 (795)
. ....-.+.-+...+..+......++++++-..+ +..++.+++.++.++||.+|. .+.+
T Consensus 74 --------~-~~~~v~~~i~~~~~~~~~~~~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~ 138 (377)
T 2ych_A 74 --------T-RKRYVVTALSNLAVILRPIQVPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEG 138 (377)
T ss_dssp --------C-CCCEEEEEECGGGCEEEEEEEECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTT
T ss_pred --------C-CcceEEEEecCCcEEEEEEECCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCc
Confidence 0 000001111111111110001347788776543 346677888889999999973 2222
Q ss_pred --------------HHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccc
Q 003782 177 --------------RKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKV 242 (795)
Q Consensus 177 --------------R~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~ 242 (795)
.+++.+|++.|||++..++.||+|||++|+.... ...+..++|||+||||||+++++
T Consensus 139 ~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~-~~~~~~~~vvDiGggttdi~i~~-------- 209 (377)
T 2ych_A 139 EQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA-EEPDRVFLVLDIGAESTSLVLLR-------- 209 (377)
T ss_dssp SEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH-TSTTCEEEEEEECSSCEEEEEEE--------
T ss_pred ceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc-cccCCeEEEEEECCCcEEEEEEE--------
Confidence 4889999999999999999999999999875321 12346799999999999999994
Q ss_pred cCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEe
Q 003782 243 YGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVE 322 (795)
Q Consensus 243 ~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~ 322 (795)
.+.+. ..++..+||.+||+.|++. ++.+ +.+||++|+.++.........+
T Consensus 210 ------~g~~~---~~~~~~~GG~~i~~~i~~~----------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~ 259 (377)
T 2ych_A 210 ------GDKPL---AVRVLTLSGKDFTEAIARS----------FNLD-----------LLAAEEVKRTYGMATLPTEDEE 259 (377)
T ss_dssp ------TTEEE---EEEEESCSHHHHHHHHHHH----------TTCC-----------HHHHHHHHHHTC----------
T ss_pred ------CCEEE---EEEeeechHHHHHHHHHHH----------hCCC-----------HHHHHHHHhhcccccccccccc
Confidence 23221 2345589999999999872 2222 4689999998875432111100
Q ss_pred ecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 323 SLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNY--SGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 323 ~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~--a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
..++-.+....++|++|++++++.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.|+.
T Consensus 260 ~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~ 332 (377)
T 2ych_A 260 LLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV 332 (377)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC
Confidence 00111123458999999999999999999999999985 356667899999999999999999999999985
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=4.2e-24 Score=225.14 Aligned_cols=202 Identities=18% Similarity=0.273 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEE
Q 003782 140 ELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVV 219 (795)
Q Consensus 140 el~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vl 219 (795)
+....+|+++++.++...+.....+++++|++|+..+|+++.++++.+|+++..++.||+|++++|+.. ..+
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~ 142 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEE
Confidence 456788888888888887777889999999999999999999999999999999999999999988653 259
Q ss_pred EEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 003782 220 FYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAK 299 (795)
Q Consensus 220 V~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 299 (795)
|+|+|||||+++++. .+.+. ......+||.+||+.|.+++. .+
T Consensus 143 viDiGggst~~~~~~--------------~g~~~---~~~~~~~Gg~~~~~~l~~~l~----------~~---------- 185 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--------------KGKIT---ATFDEPTGGTHLSLVLAGSYK----------IP---------- 185 (272)
T ss_dssp EEEECSSCEEEEEEE--------------TTEEE---EECCBSCCHHHHHHHHHHHHT----------CC----------
T ss_pred EEEECCCcEEEEEEE--------------CCEEE---EEecCCCcHHHHHHHHHHHhC----------CC----------
Confidence 999999999999984 23222 335668999999999988763 11
Q ss_pred HHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccC
Q 003782 300 LKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR 379 (795)
Q Consensus 300 L~~~~e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sr 379 (795)
...|+++|+.++ ++++|++++.++++++...+.+.++..+ +++.|+|+||+++
T Consensus 186 -~~~ae~~k~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~ 238 (272)
T 3h1q_A 186 -FEEAETIKKDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAY 238 (272)
T ss_dssp -HHHHHHHHHSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGG
T ss_pred -HHHHHHHHHhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccc
Confidence 357888888775 5899999999999999999999998764 4779999999999
Q ss_pred CHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHH
Q 003782 380 VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (795)
Q Consensus 380 iP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~a 414 (795)
+|.+++.+++.|+. ++..+.||++++|+|||++|
T Consensus 239 ~~~l~~~l~~~l~~-~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 239 LTGFSEEFSRFLGK-EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp STTHHHHHHHHHSS-CCBCCSSGGGHHHHHHHTTC
T ss_pred hhhHHHHHHHHhCC-CccccCChHHHHHHHHHhcC
Confidence 99999999999986 67778999999999999864
No 16
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=4.1e-25 Score=247.56 Aligned_cols=228 Identities=17% Similarity=0.154 Sum_probs=164.7
Q ss_pred CCcEEEecCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHH-hhhcCCCCCCCcEEEEEEecCccceeeEEEEeec
Q 003782 161 VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQ-YGIDKDFSNESRHVVFYDMGATTTYAALVYFSAY 238 (795)
Q Consensus 161 ~~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~-y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~ 238 (795)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ......+.+.+|||+||||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~-~~~~~~~~~glVvDiG~gtt~v~~v~---- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS-RQVGERTLTGTVIDSGDGVTHVIPVA---- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS-TTCCSCCCCEEEEEESSSCEEEEEEE----
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc-cccCCCCCeEEEEEcCCCceEEEEeE----
Confidence 347999999999999999999999 88999999999999999987 532 11111122679999999999999983
Q ss_pred cccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCC---
Q 003782 239 NAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT--- 315 (795)
Q Consensus 239 ~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~--- 315 (795)
.|. .+........+||++||+.|.+++.+++ +...... -...+|++|+.++...
T Consensus 182 ----------~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~-----~~~~~~~-------~~~~~e~iK~~~~~v~~~~ 238 (418)
T 1k8k_A 182 ----------EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE-----VGIPPEQ-------SLETAKAVKERYSYVCPDL 238 (418)
T ss_dssp ----------TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC-----CCCCGGG-------HHHHHHHHHHHHCCCCSCH
T ss_pred ----------CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC-----CCCCCHH-------HHHHHHHHHHhhchhcccH
Confidence 222 1222224558999999999999987543 2111111 1345677777775431
Q ss_pred --------------ceeEEEeecccCcceEEEeeHHHH---HHHHHHH------HHHHHHHHHHHHHHCC--CCCCCccE
Q 003782 316 --------------MAPISVESLYVDIDFRSSITRQKF---EELCEDL------WERSLVPLREVLNYSG--LKMDEIYA 370 (795)
Q Consensus 316 --------------~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~a~--~~~~~i~~ 370 (795)
...+.+++...+.++.++|++++| |.+++|. +..+.++|.++|..+. +....++.
T Consensus 239 ~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~ 318 (418)
T 1k8k_A 239 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN 318 (418)
T ss_dssp HHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHC
T ss_pred HHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhc
Confidence 134566655556667889999999 5555543 2568889999998865 44556789
Q ss_pred EEEecCccCCHHHHHHHHHHhCCC-----------------------ccCCCCCcchhhHhhHHHHHHH
Q 003782 371 VELIGGGTRVPKLQAKLQEYLGRT-----------------------ELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 371 V~LvGG~sriP~v~~~l~~~f~~~-----------------------~i~~~~n~deaVa~GAa~~aa~ 416 (795)
|+|+||+|++|.++++|++.++.. ++..+.++..++.+||+++|..
T Consensus 319 IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 319 IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp EEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred eEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 999999999999999998755321 1233456789999999999874
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=1.2e-24 Score=239.95 Aligned_cols=307 Identities=14% Similarity=0.174 Sum_probs=192.9
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCcccee-EEEEeCCcEEEcHhHHHHHhhCcchhhhhhhhhcCCCC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPA-LVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS-~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (795)
...|+||+||+++++++. ..+ .|..++++--|..+.++ .+.+.+...++|++|.... . ...++
T Consensus 5 ~~~ivID~Gs~~~k~G~~--~~~-~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~~------- 68 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFA--GDD-APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTLK------- 68 (375)
T ss_dssp CCCEEEEECSSEEEEEET--TCS-SCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEEE-------
T ss_pred CceEEEECCCCeEEEEEC--CCC-CCceeeccccccccccccccCCCCCCeEechhHhhcC----c--cccee-------
Confidence 467999999999999987 333 45444433333222222 1222234567888876531 0 00011
Q ss_pred hhhHhhHhhcCCCceEEECCCCcEEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCC--CCcEEEecCCCCCHHHHHHH
Q 003782 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGL 180 (795)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~--~~~~VItVPa~f~~~qR~al 180 (795)
.| +.+|..... +.+..+++|+.. ..++.. ...++||+|++++..+|+++
T Consensus 69 -----------~P--------------i~~G~i~d~-d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 69 -----------YP--------------IEHGIITNW-DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp -----------CS--------------EETTEECCH-HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred -----------cc--------------ccCCcccCH-HHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 11 112211111 234445555542 223322 24599999999999999988
Q ss_pred HHHH-HHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEecc
Q 003782 181 MQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRW 259 (795)
Q Consensus 181 ~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~ 259 (795)
.+++ +.+|++.+.+++||+|||++|+. .+.+|+|+|+||||++.+. .|. .+.....
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~--------~~~lVvDiG~gtt~v~~v~--------------~G~-~~~~~~~ 176 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGR--------TTGIVLDSGDGVTHNVPIY--------------EGY-ALPHAIM 176 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTC--------SSEEEEEECSSCEEEEEEE--------------TTE-ECGGGCE
T ss_pred HHHHHHhcCcceEEEccchheeeeecCC--------CeEEEEEcCCCceEEeEeE--------------CCE-EeccceE
Confidence 8765 77899999999999999999874 3579999999999998772 342 2222234
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc----------------CCCceeEEEee
Q 003782 260 DAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILS----------------ANTMAPISVES 323 (795)
Q Consensus 260 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS----------------~~~~~~i~i~~ 323 (795)
...+||+++|+.|.+++..+. +....... ...++++|+.+. ......+.++
T Consensus 177 ~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp- 243 (375)
T 2fxu_A 177 RLDLAGRDLTDYLMKILTERG-----YSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP- 243 (375)
T ss_dssp EESCCHHHHHHHHHHHHHHHT-----CCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT-
T ss_pred EeccCHHHHHHHHHHHHHhcC-----CCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC-
Confidence 458999999999999997651 22111011 133444444432 2222333332
Q ss_pred cccCcceEEEeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHCC--CCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 324 LYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSG--LKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 324 l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~a~--~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
++ ..+.|+++.|+ .+++|. ...+.++|.++|..+. +....++.|+|+||+|++|.++++|++.++.
T Consensus 244 --dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~ 319 (375)
T 2fxu_A 244 --DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA 319 (375)
T ss_dssp --TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred --CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHH
Confidence 33 24688888883 344442 2457888888888663 2234567899999999999999999987752
Q ss_pred -------CccCCCCCcchhhHhhHHHHHH
Q 003782 394 -------TELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 394 -------~~i~~~~n~deaVa~GAa~~aa 415 (795)
-++..+.+|+.++++||+++|.
T Consensus 320 ~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 320 LAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 1344567899999999999987
No 18
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.91 E-value=8.1e-24 Score=205.45 Aligned_cols=161 Identities=20% Similarity=0.333 Sum_probs=131.1
Q ss_pred CcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeeccc----EEEEEEeecCCCCCCCCCCCceeE
Q 003782 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAK 500 (795)
Q Consensus 425 ~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~ 500 (795)
..+.+.|++|++|||++.++.+ .+|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~V-yqGE~~~~~--dn~~LG~ 87 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVF-------TKLINRNTTIPTKKSQVFSTAADGQTQVEIKV-CQGEREMAG--DNKLLGQ 87 (182)
T ss_dssp ------CBCSSCEEEECTTSBE-------EEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEE
T ss_pred CCEEEEEecCCEEEEEEeCCEE-------EEEEeCCCccCEEEEEEEEECCCCccEEEEEE-EEcCccccc--cCceEEE
Confidence 6788999999999999988765 38999999999999999988654 99999 999998876 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhccc
Q 003782 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMT 580 (795)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (795)
|.|.|||+++ +| .| +|+|+|++|.||+|.|++.+..
T Consensus 88 f~l~gipp~p-----~G--~~-~IeVtf~iD~nGiL~VsA~d~~------------------------------------ 123 (182)
T 3n8e_A 88 FTLIGIPPAP-----RG--VP-QIEVTFDIDANGIVHVSAKDKG------------------------------------ 123 (182)
T ss_dssp EEECCCCCCC-----TT--CS-CEEEEEEECTTCCEEEEEEETT------------------------------------
T ss_pred EEEcCCCCCC-----CC--Ce-eEEEEEEEecCCEEEEEEEEcC------------------------------------
Confidence 9999999886 34 56 8999999999999987644310
Q ss_pred cccccccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHH
Q 003782 581 VEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLE 660 (795)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~ 660 (795)
++ + ...|+|+. ...||++++++|+++++
T Consensus 124 -tg------------------------------------------~----~~~i~I~~-----~~~Ls~eei~~mi~~a~ 151 (182)
T 3n8e_A 124 -TG------------------------------------------R----EQQIVIQS-----SGGLSKDDIENMVKNAE 151 (182)
T ss_dssp -TC------------------------------------------C----EEEEEESC-----CCCCCHHHHHHHHHHHH
T ss_pred -CC------------------------------------------C----EeeEEEec-----CccCCHHHHHHHHHHHH
Confidence 00 0 01455542 24699999999999999
Q ss_pred HhHHHHHHHHHHHHHHhhhhhHHHHHHhhcc
Q 003782 661 ELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (795)
Q Consensus 661 ~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~ 691 (795)
+|+++|++++++.++||.||+|||++|+.|+
T Consensus 152 ~~~~eD~~~~~~~e~kn~le~~iy~~~~~l~ 182 (182)
T 3n8e_A 152 KYAEEDRRKKERVEAVNMAEGIIHDTETKME 182 (182)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999998874
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.90 E-value=1e-22 Score=226.34 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEE
Q 003782 175 AERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQV 254 (795)
Q Consensus 175 ~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~v 254 (795)
...+.+.+|++.|||++..++.||.|||++|.... ..+..+++||+||||||+++++ .+.+..
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~---~~~~gv~vvDiGggttdisi~~--------------~g~~~~ 230 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP---EKDRGVVVVNLGYNFTGLIAYK--------------NGVPIK 230 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH---HHHHCEEEEEECSSSEEEEEEE--------------TTEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc---cccCCEEEEEECCCcEEEEEEE--------------CCEEEE
Confidence 45678999999999999999999999999986432 2245799999999999999994 344332
Q ss_pred EEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCC-----CceeEEEeecccCcc
Q 003782 255 KDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSAN-----TMAPISVESLYVDID 329 (795)
Q Consensus 255 l~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~-----~~~~i~i~~l~~~~d 329 (795)
.++..+||++||+.|+..+. . ...+||++|+.++.. ....+.++++.+ .
T Consensus 231 ---~~~i~~GG~~it~dIa~~l~----------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~ 284 (419)
T 4a2a_A 231 ---ISYVPVGMKHVIKDVSAVLD----------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--N 284 (419)
T ss_dssp ---EEEESCCHHHHHHHHHHHHT----------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--C
T ss_pred ---EEecccHHHHHHHHHHHHHC----------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--c
Confidence 23458999999999987541 1 157899999988642 345677776543 3
Q ss_pred eEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCccEEEEecCccCCHHHHHHHHHHhCCC-ccCC----
Q 003782 330 FRSSITRQKFEELCEDLWERSLVPLREVLNYSGL------KMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-ELDR---- 398 (795)
Q Consensus 330 ~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~------~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~-~i~~---- 398 (795)
....++|++|.++++|.++++...|++.|+.++. ....++.|+|+||+|++|.|++.+++.||.. .+..
T Consensus 285 ~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~ 364 (419)
T 4a2a_A 285 TIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANS 364 (419)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGS
T ss_pred cceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCC
Confidence 5679999999999999999999999999999987 3556899999999999999999999999863 2222
Q ss_pred -C----------CCcchhhHhhHHHHHHHh
Q 003782 399 -H----------LDADEAIVLGASLLAANL 417 (795)
Q Consensus 399 -~----------~n~deaVa~GAa~~aa~l 417 (795)
+ -+|..+++.|.+++++..
T Consensus 365 ~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 365 DRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp SSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred CchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 1 378999999999887653
No 20
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.84 E-value=3.9e-21 Score=207.21 Aligned_cols=228 Identities=13% Similarity=0.116 Sum_probs=147.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCC-CCHH--HH--HHHHHH------------HHHhCCceeeecc
Q 003782 134 NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPY-FGQA--ER--KGLMQA------------AELAGMNVLSLVN 196 (795)
Q Consensus 134 ~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~-f~~~--qR--~al~~A------------a~~AGl~~~~li~ 196 (795)
..+++..+++.+ +.|+. +.. .+.++ .+|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 457777777654 44443 211 22233 599999987 6531 22 222221 2334556788999
Q ss_pred hhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHH
Q 003782 197 EHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYF 276 (795)
Q Consensus 197 Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l 276 (795)
||.||+++|.... ..+..++|+|+||||||+++++ .+.+.+.+..++..+||.+||+.|.+++
T Consensus 148 e~~aa~~~~~~~~---~~~~~~~vvDiGggttd~~v~~--------------~g~~~v~~~~~~~~lGg~~~~~~I~~~l 210 (320)
T 2zgy_A 148 ESIPAGYEVLQEL---DELDSLLIIDLGGTTLDISQVM--------------GKLSGISKIYGDSSLGVSLVTSAVKDAL 210 (320)
T ss_dssp SSHHHHHHHHHHS---CTTCEEEEEEECSSCEEEEEEE--------------GGGCCEEEEEEECSCCTHHHHHHHHHHT
T ss_pred CcHHHHHhhhccc---cCCCCEEEEEcCCCeEEEEEEe--------------CCeeEEeeecCCccccHHHHHHHHHHHH
Confidence 9999999987432 2357899999999999999994 3444556667778999999999999888
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHH-hhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHH
Q 003782 277 ADEFNKQVGNGVDVRKSPKAMAKLKKQVKRT-KEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLR 355 (795)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~-K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~ 355 (795)
.++ +.++ .. ..++++ |.. ... .+....+...-.++++.+++++.++++.+.|.
T Consensus 211 ~~~-------~~~i--~~-------~~ae~~lk~~---~~~-------~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~ 264 (320)
T 2zgy_A 211 SLA-------RTKG--SS-------YLADDIIIHR---KDN-------NYLKQRINDENKISIVTEAMNEALRKLEQRVL 264 (320)
T ss_dssp TCC-------SBGG--GH-------HHHHHHHHTT---TCH-------HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHc-------CCCC--CH-------HHHHHHHHHh---hhh-------hcccceecCchhhHHHHHHHHHHHHHHHHHHH
Confidence 532 1222 11 223333 322 000 00000000011345666666666666666666
Q ss_pred HHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC--ccCCCCCcchhhHhhHHHHH
Q 003782 356 EVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHLDADEAIVLGASLLA 414 (795)
Q Consensus 356 ~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~~n~deaVa~GAa~~a 414 (795)
+.++.. .+++.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 265 ~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 265 NTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 666542 578999999999997 999999999863 46678899999999999875
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.83 E-value=3.6e-20 Score=175.31 Aligned_cols=147 Identities=22% Similarity=0.384 Sum_probs=122.0
Q ss_pred eEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 003782 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (795)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (795)
+.|++|+++|+++.++.+ .+|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGi~~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVM-------TPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKV-YEGERAMSK--DNNLLGKFELT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ccceeccEEEEEEcCCEE-------EEEEECcCccCEEEEEEEEeCCCCcceeeeeE-EEcCccccc--cCcEEEEEEEe
Confidence 579999999999988765 38999999999999999988654 89999 999998876 69999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 003782 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (795)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (795)
|+++++ +| .| +|+|+|++|.||+|+|+..+.. ++
T Consensus 72 gipp~p-----~G--~~-~I~Vtf~iD~nGiL~V~a~d~~-------------------------------------tg- 105 (152)
T 3h0x_A 72 GIPPAP-----RG--VP-QIEVTFALDANGILKVSATDKG-------------------------------------TG- 105 (152)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------------TC-
T ss_pred CCCCCC-----CC--Cc-eEEEEEEEcCCCEEEEEEEEcC-------------------------------------CC-
Confidence 999886 34 56 8999999999999988754310 00
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHH
Q 003782 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (795)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (795)
+ +..++|+.. ...||++++++|.+++++|+.
T Consensus 106 -----------------------------------------~----~~~i~I~~~----~~~ls~~ei~~~~~~a~~~~~ 136 (152)
T 3h0x_A 106 -----------------------------------------K----SESITITND----KGRLTQEEIDRMVEEAEKFAS 136 (152)
T ss_dssp -----------------------------------------C----EEEEEEECC----TTCCCHHHHHHHHHHHHHTHH
T ss_pred -----------------------------------------c----EeEEEEecC----CCCCCHHHHHHHHHHHHHHHH
Confidence 0 014566521 246999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 003782 665 KDADRRRTAELKNNLE 680 (795)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (795)
+|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 137 EDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHHCSCCCC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999997
No 22
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.82 E-value=4.2e-20 Score=174.48 Aligned_cols=147 Identities=19% Similarity=0.391 Sum_probs=118.4
Q ss_pred eEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 003782 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (795)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (795)
+.|++|+++|+++.++.+ .+|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVM-------TNLIDRNTRIPTKACKTFTTYADNQPGVSIQV-YEGERAMTR--DNHRLGTFELS 71 (152)
T ss_dssp --CBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred ceeeecceEEEEEcCCEE-------EEEEECcCccCEEEEEEEEECCCCceEEEEEE-EEcCccccc--cCceeEEEEEe
Confidence 579999999999988765 38999999999999999998654 78999 999998876 69999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 003782 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (795)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (795)
|+++++ +| .| .|+|+|++|.||+|+|++.+.. +++
T Consensus 72 gipp~p-----~G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------------tg~ 106 (152)
T 3dob_A 72 GIPPAP-----RG--VP-QIEVTFNIDANGILNVSAEDKS-------------------------------------TGK 106 (152)
T ss_dssp CCCCCC-----TT--CC-CEEEEEEECTTCCEEEEEEETT-------------------------------------TCC
T ss_pred CCCCCC-----CC--Cc-eEEEEEEeCCCCeEEEEEEEcC-------------------------------------CCC
Confidence 999886 34 56 8999999999999988654310 000
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHH
Q 003782 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (795)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (795)
...++|+. ....||++++++|.+++++|++
T Consensus 107 ----------------------------------------------~~~i~I~~----~~~~Ls~~ei~~~~~~a~~~~~ 136 (152)
T 3dob_A 107 ----------------------------------------------SNRITIQN----EKGRLTQSDIDRMVHEAKQFEK 136 (152)
T ss_dssp ----------------------------------------------EEEEEECC----C----CHHHHHHHHHHHHHTHH
T ss_pred ----------------------------------------------EEEEEEEc----CCCCCCHHHHHHHHHHHHHHHH
Confidence 01455542 1235999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 003782 665 KDADRRRTAELKNNLE 680 (795)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (795)
+|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 137 EDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHTCCCCSEEC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999987
No 23
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.81 E-value=3.9e-20 Score=174.49 Aligned_cols=146 Identities=19% Similarity=0.358 Sum_probs=120.8
Q ss_pred eEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 003782 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (795)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (795)
+.|++|+++|+++.++.+ .+|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~DV~p~slGie~~gg~~-------~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIM-------TKLITRNTTIPTKKSQVFSTAADGQTQVQIKV-FQGEREMAT--SNKLLGQFSLV 71 (151)
T ss_dssp --CBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred cceeeeeEEEEEEcCCEE-------EEEEECcCccCEEEEEEEEECCCCcceEEEEE-EEcCCcccc--cCcEEEEEEEe
Confidence 579999999999998765 38999999999999999998654 99999 999998876 69999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 003782 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (795)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (795)
|+++++ +| .| .|+|+|++|.||+|+|+..+.. +++
T Consensus 72 gipp~p-----~G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------------tg~ 106 (151)
T 3dqg_A 72 GIPPAP-----RG--VP-QVEVTFDIDANGIVNVSARDRG-------------------------------------TGK 106 (151)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------------TCC
T ss_pred CCCCCC-----CC--Cc-EEEEEEEeccCcEEEEEEEEcc-------------------------------------CCC
Confidence 999886 34 56 8999999999999988644310 000
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHH
Q 003782 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (795)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (795)
...++|+. ...||++++++|++++++|++
T Consensus 107 ----------------------------------------------~~~i~I~~-----~~~Ls~~ei~~~~~~a~~~~~ 135 (151)
T 3dqg_A 107 ----------------------------------------------EQQIVIQS-----SGGLSKDQIENMIKEAEKNAA 135 (151)
T ss_dssp ----------------------------------------------EEEEEEEC-----SSSSCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------EeEEEEec-----CCCCCHHHHHHHHHHHHHHHH
Confidence 01456652 246999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 003782 665 KDADRRRTAELKNNLE 680 (795)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (795)
+|++.+++.++||.||
T Consensus 136 ~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 136 EDAKRKELVEVINQAE 151 (151)
T ss_dssp HHTTCCCEEECBCCCC
T ss_pred HhHHHHHHHHHHhhcC
Confidence 9999999999999987
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.78 E-value=8.9e-19 Score=166.72 Aligned_cols=147 Identities=21% Similarity=0.340 Sum_probs=120.6
Q ss_pred eEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeeccc----EEEEEEeecCCCCCCCCCCCceeEEEEc
Q 003782 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (795)
Q Consensus 429 i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (795)
+.|++|++|||++.++.+ .+|||+|+++|++++.+|.+..+ +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 v~Dv~p~slGi~~~~g~~-------~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~lg~~~l~ 71 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVM-------TKLIGRNTVIPTKKSQVFSTAADSQSAVSIVI-YEGERPMVM--DNHKLGNFDVT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ceEeecccEEEEEeCCEE-------EEEEeCCCcccEeEEEEEEeCCCCCcEEEEEE-EEeCCccCc--cCCEeEEEEEE
Confidence 579999999999988755 38999999999999999998655 99999 999988876 58999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEecCCceEEeeeeeEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 003782 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (795)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (795)
|+++++ +| .| +|+|+|++|.||+|+|+..+.. + +
T Consensus 72 gipp~p-----~G--~~-~I~V~f~id~nGiL~V~a~d~~--------------------------t-----------g- 105 (152)
T 2op6_A 72 GIPPAP-----RG--VP-QIEVTFEIDVNGILHVSAEDKG--------------------------T-----------G- 105 (152)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT--------------------------T-----------C-
T ss_pred CCCCCC-----CC--Cc-eEEEEEEECCCcEEEEEEEEec--------------------------C-----------C-
Confidence 999875 33 56 8999999999999987644210 0 0
Q ss_pred cccccCCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhHH
Q 003782 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (795)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (795)
+ ...++|+. ....||+++++++.+++++|..
T Consensus 106 -----------------------------------------~----~~~i~i~~----~~~~ls~eei~~~~~~~~~~~~ 136 (152)
T 2op6_A 106 -----------------------------------------N----KNKLTITN----DHNRLSPEDIERMINDADKFAA 136 (152)
T ss_dssp -----------------------------------------C----EEEEEECS----SSSCCCHHHHHHHHHHHHHTHH
T ss_pred -----------------------------------------c----EEEEEeec----cccCCCHHHHHHHHHHHHHhHh
Confidence 0 01455542 1246999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 003782 665 KDADRRRTAELKNNLE 680 (795)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (795)
+|+..+++.++||.||
T Consensus 137 ~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 137 DDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHSCCCSEEC
T ss_pred ccHHHHHHHHHHhhcC
Confidence 9999999999999987
No 25
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.74 E-value=4e-19 Score=196.82 Aligned_cols=215 Identities=15% Similarity=0.174 Sum_probs=88.9
Q ss_pred CcEEEecCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccc
Q 003782 162 KDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (795)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~ 240 (795)
..++||+|+.++..+|+++.+++ +.+|++.+.++++|.|||++++. .+.+|+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~--------~~~lVVDiG~g~T~v~pv~------ 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL--------LTGVVVDSGDGVTHICPVY------ 170 (394)
T ss_dssp ---------------------------------------------------------CCEEEECSSCEEEECEE------
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC--------ceEEEEEcCCCceEeeeeE------
Confidence 35999999999999999999865 77899999999999999988864 3469999999999998872
Q ss_pred cccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCC-----
Q 003782 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT----- 315 (795)
Q Consensus 241 ~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~----- 315 (795)
.|.. +........+||+++|+.|.+++..+- +....... ...+|.+|+.+....
T Consensus 171 --------~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~ 229 (394)
T 1k8k_B 171 --------EGFS-LPHLTRRLDIAGRDITRYLIKLLLLRG-----YAFNHSAD-------FETVRMIKEKLCYVGYNIEQ 229 (394)
T ss_dssp --------TTEE-CSTTCEEESCCHHHHHHHHHHHHHHTT-----CCCCTTTT-------HHHHHHHHHHHCCCCSSHHH
T ss_pred --------CCEE-cccceEEeeccHHHHHHHHHHHHHhcC-----CCCCcHHH-------HHHHHHHHHhheeEecCHHH
Confidence 3322 111122347999999999999987541 22211122 233455555543221
Q ss_pred -----------ceeEEEeecccCcceEEEeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHCCCC--CCCccEEEEe
Q 003782 316 -----------MAPISVESLYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSGLK--MDEIYAVELI 374 (795)
Q Consensus 316 -----------~~~i~i~~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~a~~~--~~~i~~V~Lv 374 (795)
...+.+ .++. .++|+++.|+ .+++|. ...+.+.|.++|..+... ..-++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLt 304 (394)
T 1k8k_B 230 EQKLALETTVLVESYTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLS 304 (394)
T ss_dssp HHHHHHHCSTTCEEEEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEE
T ss_pred HHHhhccCCcCceEEEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEe
Confidence 111222 2333 4577888773 333331 235778888888877432 3345779999
Q ss_pred cCccCCHHHHHHHHHHhCC--------------C----ccCCCCCcchhhHhhHHHHHHH
Q 003782 375 GGGTRVPKLQAKLQEYLGR--------------T----ELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 375 GG~sriP~v~~~l~~~f~~--------------~----~i~~~~n~deaVa~GAa~~aa~ 416 (795)
||+|++|.+.++|++.++. . ++..+.++..++.+||+++|..
T Consensus 305 GG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 305 GGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp SGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred CcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9999999999998876642 1 2233556778999999998874
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.71 E-value=7e-17 Score=170.19 Aligned_cols=183 Identities=11% Similarity=0.057 Sum_probs=120.7
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchH
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQ 266 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~ 266 (795)
++...+..|+|++|+++++.... +....|+|+|||+++++++. .++.++....+++...||.
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~-----~~~~~vl~lgG~~~~~~~~~-------------~~g~~~~~~~~~~~~~g~G 130 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFII-----PETRTIIDIGGQDAKVLKLD-------------NNGRLLNFLMNDKCAAGTG 130 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHS-----TTCCEEEEECSSCEEEEEEC-------------TTSCEEEEEEECSCSTTSH
T ss_pred HhhCCCcccchHHHHHHHHHHhC-----CCCCeEEEEcCCCceEEEEE-------------ecCceEEEEeCCCcCcchh
Confidence 66777899999999998886654 23357899999999999883 1567788888888899999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhh--ccCCCceeE--E-EeecccCcceEEEeeHHHHHH
Q 003782 267 NMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEI--LSANTMAPI--S-VESLYVDIDFRSSITRQKFEE 341 (795)
Q Consensus 267 ~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~--LS~~~~~~i--~-i~~l~~~~d~~~~itr~efe~ 341 (795)
+|+..+++++.-.+... + .+ +..++.. ++.....-. . +..+..+ ...++
T Consensus 131 ~f~d~~a~~l~~~~~~~----------~----~~---~~~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~~~~d 184 (276)
T 4ehu_A 131 RFLDVMAKIIEVDVSEL----------G----SI---SMNSQNEVSISSTCTVFAESEVISHLSEN---------AKIED 184 (276)
T ss_dssp HHHHHHHHHHTCCGGGH----------H----HH---HTTCSSCCCCCCCSHHHHHHHHHHHHHTT---------CCHHH
T ss_pred hHHHHHHHHhccChhhh----------H----HH---HhcCCCCCCcCCccchhhhhHHHHhhhcc---------ccHHH
Confidence 99999998875333221 0 00 0000100 000000000 0 0000001 11245
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
++..+.+.+.+.+.....+. ..++.|+|+||.+++|.|++.+++.||. ++..+.||++++|+|||++|....
T Consensus 185 i~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~-~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 185 IVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINT-EIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTS-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCC-CeeeCCCcchHHHHHHHHHHHHHH
Confidence 55555555555444444333 3567899999999999999999999986 677889999999999999997644
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.70 E-value=4.2e-17 Score=177.29 Aligned_cols=207 Identities=13% Similarity=0.178 Sum_probs=139.4
Q ss_pred cEEEecCCCCCHHHH-HHHHHHHHHhCC------------ceeeecchhHHHHHHhhhcCCCCC---CCcEEEEEEecCc
Q 003782 163 DFVISVPPYFGQAER-KGLMQAAELAGM------------NVLSLVNEHSGAALQYGIDKDFSN---ESRHVVFYDMGAT 226 (795)
Q Consensus 163 ~~VItVPa~f~~~qR-~al~~Aa~~AGl------------~~~~li~Ep~AAAl~y~~~~~~~~---~~~~vlV~D~Ggg 226 (795)
.+++++|..+...+| +++++++...+- ..+.+++||.||+++|........ .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 689999999998887 589998875542 457899999999999876431101 3578999999999
Q ss_pred cceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH
Q 003782 227 TTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKR 306 (795)
Q Consensus 227 T~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 306 (795)
|||++++. .+.+ +....+...+||..+++.|.+++.+++. +..+. . ...++
T Consensus 195 Ttd~~v~~--------------~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~-----g~~l~--~-------~~i~~ 245 (355)
T 3js6_A 195 TTIIDTYQ--------------NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE-----GASIT--P-------RMIEK 245 (355)
T ss_dssp CEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHHHTC-------------C--H-------HHHHS
T ss_pred cEEEEEEc--------------CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC-----CCcCC--H-------HHHhc
Confidence 99999982 2221 1112223479999999999999877641 22221 1 11111
Q ss_pred HhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHH--HH
Q 003782 307 TKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPK--LQ 384 (795)
Q Consensus 307 ~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~--v~ 384 (795)
.+. +.... . +..-.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. ++
T Consensus 246 g~~---------~~~~~-~-~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~ 309 (355)
T 3js6_A 246 GLE---------YKQCK-L-NQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLS 309 (355)
T ss_dssp CCC------------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHH
T ss_pred CCc---------ccccc-c-cccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHH
Confidence 111 00000 0 00001122 4457778888888888888888764 467899999999999998 88
Q ss_pred HHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhcC
Q 003782 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (795)
Q Consensus 385 ~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (795)
+.+++.|+.. .||..|+|+|+..++..+..
T Consensus 310 ~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 310 HYYSDVFEKA-----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp HHSSSCEECC-----SSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-----CCcHHHHHHHHHHHHHHHHh
Confidence 9999888542 79999999999999887764
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.48 E-value=1.5e-14 Score=155.80 Aligned_cols=204 Identities=14% Similarity=0.172 Sum_probs=139.3
Q ss_pred CcEEEecCCCCCH--HHHHHHHHHHHHh--------C------CceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecC
Q 003782 162 KDFVISVPPYFGQ--AERKGLMQAAELA--------G------MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGA 225 (795)
Q Consensus 162 ~~~VItVPa~f~~--~qR~al~~Aa~~A--------G------l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~Gg 225 (795)
..+|+++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. .. .+...++|+|+||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~--~~~~~v~vvDiGg 181 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--EN--FKNKNVAVIDFGG 181 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CC--CTTCEEEEEEECS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hh--hccCCEEEEEeCC
Confidence 3689999998774 3677787766521 1 123678999988887652 21 2357899999999
Q ss_pred ccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHH-HHhhhcCCCCCCCCCHHHHHHHHHHH
Q 003782 226 TTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFAD-EFNKQVGNGVDVRKSPKAMAKLKKQV 304 (795)
Q Consensus 226 gT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~~ 304 (795)
||||++++. .+.+ +....+...+||..+++.|.+++.+ + ++..+... .+
T Consensus 182 gTtd~~v~~--------------~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~------~g~~i~~~---------~~ 231 (329)
T 4apw_A 182 LNMGFSLYR--------------NCVV-NPSERFIEEHGVKDLIIRVGDALTDLN------NGNLITNE---------QA 231 (329)
T ss_dssp SCEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCS------SCSCTTSB---------TT
T ss_pred CcEEEEEEE--------------CCEE-eeccccchhhHHHHHHHHHHHHHHhhc------cCCCCCHH---------HH
Confidence 999999994 2332 2222234579999999999987765 3 33333221 23
Q ss_pred HHHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHH
Q 003782 305 KRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQ 384 (795)
Q Consensus 305 e~~K~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~ 384 (795)
+++|+. . ... .+.+. ..+..+++++.++++++.|.+.+++. +.+++.++.|+|+||++.+ +.
T Consensus 232 e~i~~~--g--~~~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~ 293 (329)
T 4apw_A 232 ESALNN--G--YMK-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LK 293 (329)
T ss_dssp TTCSSS--C--SSC-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HH
T ss_pred HHHHhc--C--Ccc-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HH
Confidence 333332 1 110 01111 14567888888888888888777766 3556668999999999998 67
Q ss_pred HHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhc
Q 003782 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 385 ~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls 418 (795)
+.|++.|+. ++....||..|+|+|+..++....
T Consensus 294 ~~l~~~~~~-~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 294 EQISKTYPN-NSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp HHHHHHSTT-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-CCEecCCChhhHHHHHHHHHhhhh
Confidence 999999984 455677999999999998876543
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.46 E-value=1e-13 Score=128.29 Aligned_cols=100 Identities=19% Similarity=0.361 Sum_probs=82.1
Q ss_pred CcceeEecceeeeEeeecCCccccCCCcceeeeeCCCCCCcceEEeeeecc----cEEEEEEeecCCCCCCCCCCCceeE
Q 003782 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAK 500 (795)
Q Consensus 425 ~~~~i~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~ 500 (795)
+++.+.|++|++|||++.++.+. +|||+|+++|++++.+|.+.. .+.|.+ |+|++.++. +|..||+
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--~n~~Lg~ 84 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQ 84 (135)
T ss_dssp ------CCCSSCCCEEETTTEEC-------CSSCSSSCSSBCCEEEECCCSSSCSSCEEEE-EECCSSSCS--SSEEEEE
T ss_pred CcEEEEEeecCcEEEEEECCEEE-------EEEcCCCeEeEeEeEEEEeccCCceEEEEEE-EEeCCcccc--cCcEEEE
Confidence 68899999999999999887553 899999999999999998764 499999 999988876 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceEEEEEEEecCCceEEeeee
Q 003782 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRAD 542 (795)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~ 542 (795)
|.+.|+++++ +| .+ +|+|+|++|.||+|.|+..+
T Consensus 85 f~l~gipp~p-----~G--~~-~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 85 FNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp EECCCCCSCC-----SS--SC-CEEEEEEECTTSEEEEEEEE
T ss_pred EEEeCCCCCC-----Cc--ee-EEEEEEEECCCCEEEEEEEE
Confidence 9999999876 34 56 89999999999999887543
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.36 E-value=3.8e-13 Score=149.46 Aligned_cols=244 Identities=16% Similarity=0.102 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCC--CCcEEEecCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhhhcCCCCCCCc
Q 003782 140 ELLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESR 216 (795)
Q Consensus 140 el~a~~L~~l~~~a~~~~~~~--~~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~ 216 (795)
+.+..+++|+.. ..++.. -..+++|.|+..+...|+.+.+.+ +..|++.+.++.+|.+|+++.+..........
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCc
Confidence 344555655543 223322 246999999999999999999987 77899999999999999988875422222235
Q ss_pred EEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 003782 217 HVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKA 296 (795)
Q Consensus 217 ~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~ 296 (795)
+-||+|+|+|+|+++.+. .|.. +........+||+++|+.|.+++..+.. . ...
T Consensus 180 tglVVDiG~g~T~v~PV~--------------~G~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~------~--~~~--- 233 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVA--------------EGYV-IGSSIKTMPLAGRDVTYFVQSLLRDRNE------P--DSS--- 233 (427)
T ss_dssp CEEEEEESSSCEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHHTTC-------------------
T ss_pred eEEEEECCCCceEEEEEE--------------CCEE-ehhhheeccccHHHHHHHHHHHHHHcCC------C--chh---
Confidence 679999999999999982 2211 1111111279999999999988764321 1 000
Q ss_pred HHHHHHHHHHHhhhccCCCce-----------eEEEee--c--ccCcceEEEeeHHHH---HHHHHHH------HHHHHH
Q 003782 297 MAKLKKQVKRTKEILSANTMA-----------PISVES--L--YVDIDFRSSITRQKF---EELCEDL------WERSLV 352 (795)
Q Consensus 297 ~~~L~~~~e~~K~~LS~~~~~-----------~i~i~~--l--~~~~d~~~~itr~ef---e~l~~~~------~~~i~~ 352 (795)
...++..|+.+...... +..+.. + .++..+.++|..+.| |-+++|- ...|.+
T Consensus 234 ----~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~ 309 (427)
T 3dwl_A 234 ----LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPE 309 (427)
T ss_dssp ----CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHH
T ss_pred ----HHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccH
Confidence 23445555554322100 000110 1 234444567777776 3344441 245778
Q ss_pred HHHHHHHHCCCC--CCCccEEEEecCccCCHHHHHHHHHHhC------------------C---CccCCCCCcchhhHhh
Q 003782 353 PLREVLNYSGLK--MDEIYAVELIGGGTRVPKLQAKLQEYLG------------------R---TELDRHLDADEAIVLG 409 (795)
Q Consensus 353 ~i~~~l~~a~~~--~~~i~~V~LvGG~sriP~v~~~l~~~f~------------------~---~~i~~~~n~deaVa~G 409 (795)
+|.++|.++... ..-...|+|+||+|.+|.+.++|.+.+. . -++..+.++..++=.|
T Consensus 310 ~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiG 389 (427)
T 3dwl_A 310 LVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFG 389 (427)
T ss_dssp HHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHH
T ss_pred HHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecC
Confidence 888888766432 2223569999999999998888876441 1 0233345677899999
Q ss_pred HHHHHHH
Q 003782 410 ASLLAAN 416 (795)
Q Consensus 410 Aa~~aa~ 416 (795)
++++|..
T Consensus 390 GSilasl 396 (427)
T 3dwl_A 390 GSLLAQT 396 (427)
T ss_dssp HHHHHHS
T ss_pred ceeeccc
Confidence 9999863
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.35 E-value=6.6e-12 Score=140.86 Aligned_cols=177 Identities=12% Similarity=0.122 Sum_probs=115.9
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEeeCCCCCccceeEEEEeC----CcEEEcHhHHHHHhhCcchhhhhhhhhcC
Q 003782 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHE----STRLLGEEASGIIARYPHRVYSQLRDMIG 99 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~v~~~~----~~~~~G~~A~~~~~~~p~~~~~~~K~llG 99 (795)
...|+||+||.++++++. ..+ .|. ..+||+|+... ...+||.+|.... +
T Consensus 23 ~~~iVID~GS~~~kaG~a--g~~-~P~---------~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r------------ 75 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYS--GSD-FPQ---------SILPSVYGKYTADEGNKKIFSEQSIGIP---R------------ 75 (498)
T ss_dssp BSCEEEECCSSEEEEEET--TCS-SCS---------EEEESEEEEESSCSSCCEECCTTGGGSC---C------------
T ss_pred CCeEEEECCCcEEEEEEC--CCC-Cee---------eecCceeEEeccCCCccEEEecHHHhcC---c------------
Confidence 367999999999999987 222 232 23699999843 2467777532210 0
Q ss_pred CCChhhHhhHhhcCCCceEEECCCCcEEE--EeCCCccccHHHHHHHHHHHHHHHHHhhcCC--CCC-cEEEecCCCCCH
Q 003782 100 KPFKQVKHLIDSLYLPFNVVEDSRGAVSF--KIDENNNFSVEELLAMVLSYAVNLVDTHAKL--AVK-DFVISVPPYFGQ 174 (795)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~-~~VItVPa~f~~ 174 (795)
+.+.+ .+.+|.... -+.+..+++|+... .++. .-. .++||.|+..+.
T Consensus 76 ------------------------~~l~l~~Pi~~GvI~d-wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~ 127 (498)
T 3qb0_A 76 ------------------------KDYELKPIIENGLVID-WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNST 127 (498)
T ss_dssp ------------------------TTEEEEESEETTEESC-HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCH
T ss_pred ------------------------CceEEeccCcCCEEcc-HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcH
Confidence 00111 122332122 24455666666532 2222 122 589999999999
Q ss_pred HHHHHHHHHH-HHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEE
Q 003782 175 AERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQ 253 (795)
Q Consensus 175 ~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~ 253 (795)
..|+.|.+.+ +..|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+. .|..
T Consensus 128 ~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~--------tglVVDiG~g~T~vvPI~--------------~G~~- 184 (498)
T 3qb0_A 128 ENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP--------NCLVVDIGHDTCSVSPIV--------------DGMT- 184 (498)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEE--------------TTEE-
T ss_pred HHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC--------eEEEEEcCCCcEEEEEEe--------------CCEE-
Confidence 9999999975 778999999999999999877642 249999999999999883 2211
Q ss_pred EEEeccCCCCchHHHHHHHHHHHHH
Q 003782 254 VKDVRWDAELGGQNMELRLVEYFAD 278 (795)
Q Consensus 254 vl~~~~~~~lGG~~~D~~l~~~l~~ 278 (795)
+........+||+++|+.|.++|..
T Consensus 185 l~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 185 LSKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp CGGGCEEESCSHHHHHHHHHHHTTT
T ss_pred ccccceeccccHHHHHHHHHHHHHh
Confidence 1111111279999999999999864
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.32 E-value=7e-12 Score=112.59 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHH
Q 003782 668 DRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFF 747 (795)
Q Consensus 668 ~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i~~ 747 (795)
++|++.++||.||+|||++|..|.++. |..++++++++.|...|+++.+||+.+ ++++.++|++|+++|+.++.||..
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~-~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~ 80 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIIS 80 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGG-GBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999998753 889999999999999999999999986 688999999999999999999999
Q ss_pred HHHhh
Q 003782 748 RFKEL 752 (795)
Q Consensus 748 r~~e~ 752 (795)
|+++.
T Consensus 81 k~y~~ 85 (113)
T 3lof_A 81 GLYQG 85 (113)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 99864
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.08 E-value=1.6e-09 Score=126.46 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=72.9
Q ss_pred cEEEecCCCCCHHHHHHHHHH-HHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeecccc
Q 003782 163 DFVISVPPYFGQAERKGLMQA-AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAK 241 (795)
Q Consensus 163 ~~VItVPa~f~~~qR~al~~A-a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~ 241 (795)
.+++|.|..++...|+.|.+. .+..|++.+.++.++.+|++++|. .+-+|+|+|++.|.++-|.
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~--------~tglVVDiG~~~T~v~PV~------- 264 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL--------SSTCIVDVGDQKTSVCCVE------- 264 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC--------SEEEEEEECSSCEEEEEEE-------
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC--------CceEEEEeCCCceeeeeeE-------
Confidence 399999999999999988877 456799999999999999987754 3569999999999998882
Q ss_pred ccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHH
Q 003782 242 VYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (795)
Q Consensus 242 ~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~ 279 (795)
.|........ ...+||.++++.|.++|...
T Consensus 265 -dG~~l~~~~~-------rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 265 -DGVSHRNTRL-------CLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -SSCBCGGGCE-------EESCCHHHHHHHHHHHHHHT
T ss_pred -CCEEehhheE-------EecccHHHHHHHHHHHHHhc
Confidence 1111222221 12799999999999888653
No 34
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.04 E-value=2.1e-10 Score=103.97 Aligned_cols=83 Identities=19% Similarity=0.407 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHH
Q 003782 667 ADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVF 746 (795)
Q Consensus 667 ~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i~ 746 (795)
..+|++.++||.||+|||++|..|.++. +...+++++++.|...|+++.+||+++ ++++.++|+.++++|++++.||.
T Consensus 11 ~~~re~iEarN~aEsliy~~e~~L~e~~-~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~ 88 (120)
T 2p32_A 11 SSGLVPRGSHMGLESYAFNLKQTIEDEK-LKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPII 88 (120)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHTCTT-TGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHH
Confidence 3467788999999999999999998643 788999999999999999999999864 57899999999999999999999
Q ss_pred HHHHh
Q 003782 747 FRFKE 751 (795)
Q Consensus 747 ~r~~e 751 (795)
.|++.
T Consensus 89 ~k~y~ 93 (120)
T 2p32_A 89 SKLYQ 93 (120)
T ss_dssp HHHCC
T ss_pred HHHHH
Confidence 99863
No 35
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.02 E-value=6e-10 Score=121.89 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHh-CC--ceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCe
Q 003782 175 AERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQ 251 (795)
Q Consensus 175 ~qR~al~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~ 251 (795)
.+-+.+.+|.+.+ |+ ++-. -||.||+++...+. +.+-.+.++||||||||++++. . .+.
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD---E~eLGvaiIDmGGGTTd~sVf~------------~-G~l 429 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP---GTTRPLAILDLGAGSTDASIIN------------P-KGD 429 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC------------T-TCC
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc------------C-CcE
Confidence 4577889999999 99 6666 89999999876654 3456799999999999999993 1 122
Q ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccC---------CCceeEEE-
Q 003782 252 FQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSA---------NTMAPISV- 321 (795)
Q Consensus 252 ~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~---------~~~~~i~i- 321 (795)
+.... -..||+.++..|..-|. -.| +..||+.|.-=++ ...-.+.+
T Consensus 430 v~a~~----ip~gG~~VT~DIA~~Lg---------t~d-----------~~~AErIK~YG~A~ve~lf~~~dede~Iev~ 485 (610)
T 2d0o_A 430 IIATH----LAGAGDMVTMIIARELG---------LED-----------RYLAEEIKKYPLAKVESLFHLRHEDGSVQFF 485 (610)
T ss_dssp EEEEE----EECSHHHHHHHHHHHHT---------CCC-----------HHHHHHHHHSCEEEECSSSEEEETTSCEEEC
T ss_pred EEEEE----eccchHHHHHHHHHHhC---------CCC-----------HHHHHHhcccCceeecccccccCCCCeEEEe
Confidence 22222 25799999988876552 111 3678888882111 12224445
Q ss_pred -eecc----cC-----cceEEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHCCC-----CCCCccEEEEecCccCCHH
Q 003782 322 -ESLY----VD-----IDFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVPK 382 (795)
Q Consensus 322 -~~l~----~~-----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~i~~V~LvGG~sriP~ 382 (795)
+.+. .. .+--..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.+|.
T Consensus 486 ~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~G 563 (610)
T 2d0o_A 486 STPLPPAVFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFE 563 (610)
T ss_dssp SSCCCGGGTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSS
T ss_pred cCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhccc
Confidence 3221 11 0112355 666 776 65555555444 3334555332 3567899999999999999
Q ss_pred HHHHHHHHhCC-C------ccCCCCCcchhhHhhHHHHHHH
Q 003782 383 LQAKLQEYLGR-T------ELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 383 v~~~l~~~f~~-~------~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.++..+.|+. . .....-.|..|+|.|.+++-+.
T Consensus 564 I~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 564 VPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp HHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 99999999987 2 1122458999999999987653
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.99 E-value=1.1e-09 Score=120.44 Aligned_cols=196 Identities=16% Similarity=0.101 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHh-CC--ceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeE
Q 003782 176 ERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQF 252 (795)
Q Consensus 176 qR~al~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~ 252 (795)
+-+.+.+|.+.+ |+ ++-. -||.||+++...+. +.+-.+.++||||||||++++. . .+.+
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed---E~elGvaiIDmGgGTTd~sVf~------------~-g~lv 432 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTP---GCAAPLAILDLGAGSTDAAIVN------------A-EGQI 432 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC------------S-SSCE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc------------C-CcEE
Confidence 345688888999 99 6656 89999999876654 3456799999999999999993 1 1222
Q ss_pred EEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccC---------CCceeEEE--
Q 003782 253 QVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSA---------NTMAPISV-- 321 (795)
Q Consensus 253 ~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~---------~~~~~i~i-- 321 (795)
.... -..||+.++..|..-|. -.| +..||+.|.-=++ ...-.+.+
T Consensus 433 ~a~~----ip~gG~~VT~DIA~~Lg---------~~d-----------~~~AErIK~YG~A~~e~lf~~~dede~Iev~~ 488 (607)
T 1nbw_A 433 TAVH----LAGAGNMVSLLIKTELG---------LED-----------LSLAEAIKKYPLAKVESLFSIRHENGAVEFFR 488 (607)
T ss_dssp EEEE----EECCHHHHHHHHHHHHT---------CSC-----------HHHHHHHHHSCEEEECSSSEEEETTSCEEECS
T ss_pred EEEE----eccchHHHHHHHHHHhC---------CCC-----------HHHHHHhcccCceeecccccccCCCCeEEEec
Confidence 2222 25799999988876552 111 3678888882111 11223445
Q ss_pred eecc----cC-----cceEEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHCCC-----CCCCccEEEEecCccCCHHH
Q 003782 322 ESLY----VD-----IDFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVPKL 383 (795)
Q Consensus 322 ~~l~----~~-----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~i~~V~LvGG~sriP~v 383 (795)
+.+. .. .+--..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.+|.+
T Consensus 489 ~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI 566 (607)
T 1nbw_A 489 EALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEI 566 (607)
T ss_dssp SCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSH
T ss_pred CCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccH
Confidence 3221 11 0112255 556 666 55555555443 4555777654 24577999999999999999
Q ss_pred HHHHHHHhCC-C------ccCCCCCcchhhHhhHHHHHH
Q 003782 384 QAKLQEYLGR-T------ELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 384 ~~~l~~~f~~-~------~i~~~~n~deaVa~GAa~~aa 415 (795)
.++..+.|+. . .....-.|..|+|.|.+++-+
T Consensus 567 ~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 567 PQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 9999999976 2 112245899999999997643
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.92 E-value=5.9e-10 Score=100.05 Aligned_cols=78 Identities=21% Similarity=0.424 Sum_probs=69.0
Q ss_pred HHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHh
Q 003782 672 TAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKE 751 (795)
Q Consensus 672 ~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i~~r~~e 751 (795)
+.++||.||+|||++|..|.+++ +...+++++|+.|...|+++.+||+++ ++++.++|++++++|+.++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e-~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEK-LQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGG-GTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999997533 889999999999999999999999754 4567899999999999999999999875
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.43 E-value=1e-05 Score=84.03 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHh
Q 003782 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (795)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~l 417 (795)
++..+++.+..-+.+.++..++ .+.|+++||.++.|.+++.+.+.++. ++..+.+++.+.|+|||++|...
T Consensus 187 i~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~-~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 187 IIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGV-EIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCS-CEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCC-CeEeCCCcchHhHHHHHHHHHHh
Confidence 3344444444444444443322 35799999999999999999999986 56667777779999999998764
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.83 E-value=4.1e-05 Score=86.90 Aligned_cols=126 Identities=14% Similarity=0.176 Sum_probs=87.9
Q ss_pred CcEEEecCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccc
Q 003782 162 KDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (795)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~ 240 (795)
..+++|.|+.++...|+.|.+.+ +..|++.+.++.+|.||+++++. ..+-||+|+|+|+|+++.+.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-------~ttGLVVDiG~g~T~VvPV~------ 288 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-------STSTCVVNIGAAETRIACVD------ 288 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-------SSCEEEEEECSSCEEEEEEE------
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-------CCceEEEcCCCceEEEEEEe------
Confidence 35999999999999999999987 46899999999999999987764 24569999999999999882
Q ss_pred cccCeeeecCeEEEEEeccCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCc
Q 003782 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTM 316 (795)
Q Consensus 241 ~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~ 316 (795)
.|. -+........+||+++|..|.++|..+- +.+ .+..-.... =+..++.+|+.++.-..
T Consensus 289 --------eG~-vl~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy-~~~~f~t~~---e~eiVrdIKEk~CyVs~ 348 (655)
T 4am6_A 289 --------EGT-VLEHSAITLDYGGDDITRLFALFLLQSD---FPL-QDWKIDSKH---GWLLAERLKKNFTTFQD 348 (655)
T ss_dssp --------TTE-ECGGGCEEESCCHHHHHHHHHHHHHHTT---CSC-CSCCTTSHH---HHHHHHHHHHHHCCCCG
T ss_pred --------CCE-EEhhheeeecchHHHHHHHHHHHHHHcC---CCc-cccCCCCcc---hHHHHHHHHHheEEEcc
Confidence 221 1111111237999999999999987541 001 011111111 13557788888876643
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.45 E-value=0.026 Score=58.34 Aligned_cols=77 Identities=13% Similarity=-0.026 Sum_probs=56.0
Q ss_pred EeeHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecC-ccCCHHHHHHHHHHh--CCCccCCCCCcchhhHh
Q 003782 333 SITRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGG-GTRVPKLQAKLQEYL--GRTELDRHLDADEAIVL 408 (795)
Q Consensus 333 ~itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG-~sriP~v~~~l~~~f--~~~~i~~~~n~deaVa~ 408 (795)
..+++++-. ++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+.+.+ ...++..+.++..+.|.
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 346666643 445555666555555444444 346999999 899999999999974 44567778899999999
Q ss_pred hHHHHH
Q 003782 409 GASLLA 414 (795)
Q Consensus 409 GAa~~a 414 (795)
|||+.+
T Consensus 281 GAaL~~ 286 (287)
T 2ews_A 281 GALYLE 286 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
No 41
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.28 E-value=0.99 Score=46.75 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=36.9
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.+.|+|.||.+..+.+.+.+++.+...++.... .+.+.+.||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 4567999999887788888888877543454444 567899999988764
No 42
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.14 E-value=0.19 Score=52.97 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=29.9
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|+|++...... ....+.++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~-~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGA-GQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCC-CCCCCCEEEEEeCcc-eEEEEE
Confidence 4786 5799999999998544321 122366888888887 555555
No 43
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.93 E-value=0.11 Score=54.66 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEEeeccccccCeeeecCeEEEEE
Q 003782 177 RKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKD 256 (795)
Q Consensus 177 R~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~~~~~~~~~~~~~~~~~~~vl~ 256 (795)
...+..+-+..|+++--+=.|.+|...+.+....+. .....+|+|+|||+|.+++++ ++.+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~--------------~~~~~--- 161 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGK--------------GYKVR--- 161 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEE--------------TTEEE---
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEe--------------CCcee---
Confidence 344444445679987444444555433334333232 245799999999999999983 22221
Q ss_pred eccCCCCchHHHHHHH
Q 003782 257 VRWDAELGGQNMELRL 272 (795)
Q Consensus 257 ~~~~~~lGG~~~D~~l 272 (795)
...+-.+|+..+.+.+
T Consensus 162 ~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 162 EVISLPIGIVNLTETF 177 (315)
T ss_dssp EEEEECCCHHHHHHHH
T ss_pred eEEEEeccHHHHHHHh
Confidence 1223478988876653
No 44
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.78 E-value=0.08 Score=56.33 Aligned_cols=75 Identities=9% Similarity=-0.107 Sum_probs=50.5
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecC-ccCCHHHHHHHHHHhC-----CCccCCCCCcchhhH
Q 003782 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGG-GTRVPKLQAKLQEYLG-----RTELDRHLDADEAIV 407 (795)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG-~sriP~v~~~l~~~f~-----~~~i~~~~n~deaVa 407 (795)
+++++-. ++.-+.+++..+..-+.+..++ +.|+++|| .+..|.+++.|++.++ ..++..+.++..+-|
T Consensus 277 ~~eDIa~gll~sVa~~I~~lA~l~A~~~~i-----~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GA 351 (360)
T 2i7n_A 277 SKEDLARATLVTITNNIGSIARMCALNENI-----DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGA 351 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHH
Confidence 4444433 2333444444443322233343 35999999 8999999999999873 345666778999999
Q ss_pred hhHHHHH
Q 003782 408 LGASLLA 414 (795)
Q Consensus 408 ~GAa~~a 414 (795)
+|||+.+
T Consensus 352 lGAaL~~ 358 (360)
T 2i7n_A 352 VGALLEL 358 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 45
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.72 E-value=1.9 Score=45.46 Aligned_cols=65 Identities=15% Similarity=0.107 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHh---CCCccCCCC---CcchhhHhhHHHHHHH
Q 003782 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYL---GRTELDRHL---DADEAIVLGASLLAAN 416 (795)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f---~~~~i~~~~---n~deaVa~GAa~~aa~ 416 (795)
+.+.+...+.++.+.. .++.|+|+||.+....+++.|.+.+ |. ++..+. ..|.+++.|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~-~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGI-KFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTC-EEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCC-EEEecCCCCCChhHHHHHHHHHHHH
Confidence 3444555555555443 3568999999999999999999877 33 343333 4578899998876543
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.66 E-value=0.02 Score=65.64 Aligned_cols=84 Identities=19% Similarity=0.261 Sum_probs=59.8
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhh
Q 003782 333 SITRQKFEELCEDLWERSLVPLREV---LNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLG 409 (795)
Q Consensus 333 ~itr~efe~l~~~~~~~i~~~i~~~---l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~G 409 (795)
.-+|.+|-.++.-+++.+.--++.. |+..+. .++.|.++||+++.|++.+.+.+.||. ++... ...|+.|+|
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~-pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGC-AMLLP-EESEAMLLG 482 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCC-EEEEE-SCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCC-eEEec-CCCcchHHH
Confidence 4478888544445555444333333 344443 578899999999999999999999996 55433 456899999
Q ss_pred HHHHHHHhcCCc
Q 003782 410 ASLLAANLSDGI 421 (795)
Q Consensus 410 Aa~~aa~ls~~~ 421 (795)
||+.|+.-.+.+
T Consensus 483 AA~lA~~a~G~~ 494 (554)
T 3l0q_A 483 SAMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHcCCc
Confidence 999998765544
No 47
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.58 E-value=1 Score=47.47 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=32.7
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCCC--------ccCCCCCcchhhHhhHHHHH
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT--------ELDRHLDADEAIVLGASLLA 414 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~--------~i~~~~n~deaVa~GAa~~a 414 (795)
+.+.|+|-||.+..+.+.+.|++.+... ++....-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4467999999888887777777665421 22223335779999999764
No 48
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.43 E-value=0.37 Score=50.23 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=28.7
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++-...... ...++++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~-~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA-QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT-TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC-CCCCCEEEEEECCc-eeEEEE
Confidence 4776 47999999999885443211 22356788888877 444444
No 49
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.35 E-value=0.032 Score=63.61 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhcC
Q 003782 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (795)
Q Consensus 340 e~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls~ 419 (795)
..+++-+++.+.--++..++..+.....++.|.++||+++.|++.+++.+.||. ++.. ....|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDA-PVYV-IDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTS-CEEE-CCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCC-ceEe-cCCCCchHHHHHHHHHHHhC
Confidence 334444555554445555555444444678899999999999999999999996 5533 35678999999999886443
No 50
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.30 E-value=0.036 Score=62.77 Aligned_cols=82 Identities=22% Similarity=0.209 Sum_probs=55.5
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 334 ITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 334 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
-+|.+|-+ -+++.+.-.++..++...- .. ++.|.++||+++.|++.+.+.+.||. ++.....+.|+.|+|||+.
T Consensus 374 ~~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~~~~~e~~alGaA~l 447 (511)
T 3hz6_A 374 TTRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNV-SLLVKPDAHLHPLRGLAAL 447 (511)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTC-EEEECCCGGGHHHHHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCC-eeEEecCCCCchHHHHHHH
Confidence 35666543 3333333333333332221 23 78899999999999999999999996 5512345889999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (511)
T 3hz6_A 448 AAVELEWS 455 (511)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCc
Confidence 98765543
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.14 E-value=0.03 Score=62.91 Aligned_cols=81 Identities=25% Similarity=0.315 Sum_probs=53.8
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.++-+ +++.+.-.+...++ .|+..+. .++.|.++||+++.+.+.+.+.+.+|. ++......+.+.|+|||+.
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMD-VVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQ-QLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCC-CEEEESCTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcceEEEEeccccCHHHHHHHHHHhCC-eEEeCCCCCcccHHHHHHH
Confidence 5666543 22333333433333 3343343 467799999999999999999999986 5654444443589999999
Q ss_pred HHHhcCC
Q 003782 414 AANLSDG 420 (795)
Q Consensus 414 aa~ls~~ 420 (795)
|+.-.+.
T Consensus 432 A~~~~g~ 438 (484)
T 2itm_A 432 AQIAANP 438 (484)
T ss_dssp HHHHHCT
T ss_pred HHHHcCC
Confidence 9875543
No 52
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.12 E-value=0.042 Score=62.01 Aligned_cols=80 Identities=24% Similarity=0.216 Sum_probs=54.5
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHH
Q 003782 335 TRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (795)
Q Consensus 335 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~a 414 (795)
+|.++- +-+++.+.-.++..++...-.. .++.|.++||+++.|++.+.+.+.+|. ++... ...|+.|+|||+.|
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNR-KVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCC-eEEEc-CCCcchHHHHHHHH
Confidence 455543 3344444444444444332222 578899999999999999999999986 55433 44679999999999
Q ss_pred HHhcCC
Q 003782 415 ANLSDG 420 (795)
Q Consensus 415 a~ls~~ 420 (795)
+.-.+.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 875543
No 53
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.11 E-value=0.92 Score=47.06 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=36.4
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCCC-----ccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT-----ELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~-----~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.+.|+|-||.+..|.+.+.|++.+... .+....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4567999999998887888888777532 2333334577999999988764
No 54
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.01 E-value=4.3 Score=42.77 Aligned_cols=45 Identities=7% Similarity=0.037 Sum_probs=34.0
Q ss_pred CCCcEEEecCCCCCHHHHHHHHHHHHHh-C---CceeeecchhHHHHHHh
Q 003782 160 AVKDFVISVPPYFGQAERKGLMQAAELA-G---MNVLSLVNEHSGAALQY 205 (795)
Q Consensus 160 ~~~~~VItVPa~f~~~qR~al~~Aa~~A-G---l~~~~li~Ep~AAAl~y 205 (795)
++..+.|++|...+......+.+..+.. | + .+.+.|+..|||+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~-pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSE-SYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBS-CEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCc-eEEEECcHHHHHHhh
Confidence 5678999999999877666666665543 3 4 457999999999884
No 55
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.98 E-value=0.042 Score=62.08 Aligned_cols=81 Identities=11% Similarity=0.028 Sum_probs=55.7
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.+|-+.+ +.+.-.+...+ +.|+..+. .++.|.++||+++.|.+.+.+.+.||. ++.. ..+.|+.|+|||+.
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 437 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNV-PIVT-MKEQQSGTLAAMFL 437 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCC-eEEe-cCCCCchhHHHHHH
Confidence 566654332 33333333333 33444443 578999999999999999999999996 5543 34678999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 438 A~~a~G~~ 445 (504)
T 3ll3_A 438 ARQALGLN 445 (504)
T ss_dssp HHHHTTSC
T ss_pred HHHHcCcc
Confidence 98755543
No 56
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.88 E-value=0.16 Score=53.48 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=32.6
Q ss_pred CccEEEEecCccCC-HHHHHHHHHHhC---------CCccCCCCCcchhhHhhHHHHHH
Q 003782 367 EIYAVELIGGGTRV-PKLQAKLQEYLG---------RTELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 367 ~i~~V~LvGG~sri-P~v~~~l~~~f~---------~~~i~~~~n~deaVa~GAa~~aa 415 (795)
+.+.|+|-||.++. +.+.+.|++.+. ..++....-.+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 45689999998876 555555554432 11344445567899999998764
No 57
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.83 E-value=0.033 Score=63.07 Aligned_cols=79 Identities=27% Similarity=0.358 Sum_probs=55.1
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.+|-+.+ +.+.-.+...++ .|+..+. .++.|.++||+++.|++.+++.+.||. ++.. ....|+.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGM-DVTR-PATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEE-ECCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCC-ceEe-cCCcccHHHHHHHH
Confidence 566654432 333334444333 4444554 467899999999999999999999996 5543 35677999999999
Q ss_pred HHHhcC
Q 003782 414 AANLSD 419 (795)
Q Consensus 414 aa~ls~ 419 (795)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 986544
No 58
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.73 E-value=0.065 Score=60.88 Aligned_cols=83 Identities=20% Similarity=0.222 Sum_probs=57.5
Q ss_pred eeHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHH
Q 003782 334 ITRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (795)
Q Consensus 334 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~ 412 (795)
-+|.++-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.|++.+.+.+.||. ++..+ ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~-pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGT-RVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCC-EEEeC-CCCchHHHHHHH
Confidence 3566654432 33333444444433334555 467899999999999999999999986 55433 456899999999
Q ss_pred HHHHhcCCc
Q 003782 413 LAANLSDGI 421 (795)
Q Consensus 413 ~aa~ls~~~ 421 (795)
.|+.-.+.+
T Consensus 446 lA~~a~G~~ 454 (526)
T 3ezw_A 446 LAGLAVGFW 454 (526)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCCC
Confidence 998866654
No 59
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.58 E-value=0.43 Score=50.20 Aligned_cols=49 Identities=27% Similarity=0.300 Sum_probs=32.8
Q ss_pred ccEEEEecCccC-CHHHHHHHHHHhCC---------CccCCCCCcchhhHhhHHHHHHH
Q 003782 368 IYAVELIGGGTR-VPKLQAKLQEYLGR---------TELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 368 i~~V~LvGG~sr-iP~v~~~l~~~f~~---------~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
.+.|+|.||.+. .|.+.+.+++.+.. .++....-.+.+.++|||..+..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 457899999886 57777777665532 12333334567899999988764
No 60
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.44 E-value=0.05 Score=61.38 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=56.7
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.+|-+. ++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.||. ++.. ..+.|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~-pV~~-~~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNT-SVER-PEIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCC-ceEe-cCCCcchHHHHHHH
Confidence 56665443 233444444444333222454 467899999999999999999999996 5533 34678999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766544
No 61
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.38 E-value=0.049 Score=62.58 Aligned_cols=79 Identities=15% Similarity=0.174 Sum_probs=54.7
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCcc-CCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGT-RVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~s-riP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~ 412 (795)
+|.+|-+.+ +.+.-.+...+ +.|+..+. .++.|.++||++ +.+++.+++.+.||. ++.. ..+.|+.|+|||+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNR-EIKV-AASKQTPALGAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTS-CEEE-BCCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCC-eeEe-cCCCccHHHHHHH
Confidence 566654332 22333333333 33444443 578999999999 999999999999996 5533 3467899999999
Q ss_pred HHHHhcC
Q 003782 413 LAANLSD 419 (795)
Q Consensus 413 ~aa~ls~ 419 (795)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987554
No 62
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.20 E-value=0.051 Score=61.43 Aligned_cols=81 Identities=20% Similarity=0.073 Sum_probs=55.5
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.+|-+.+ +.+.-.+...++ .|+..+. .++.|.++||+++.|.+.+.+.+.||. ++... ...|+.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~-~~~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQR-PVQLL-ANPLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEEE-ECCSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCC-eEEec-CCCCchHHHHHHH
Confidence 566654333 333333444333 3444454 467899999999999999999999986 55433 3357999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 445 A~~a~G~~ 452 (508)
T 3ifr_A 445 AAIGGGDD 452 (508)
T ss_dssp HHHHTCSS
T ss_pred HHHHhCCC
Confidence 98765543
No 63
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.10 E-value=0.09 Score=59.20 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=54.5
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.++-+ +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|. ++.. ....|+.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~-pV~~-~~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGV-PVAV-PEVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCC-eeEe-cCCcccHHHHHHHH
Confidence 5666543 3344444444444433222343 456799999999999999999999986 5543 34567999999999
Q ss_pred HHHhcC
Q 003782 414 AANLSD 419 (795)
Q Consensus 414 aa~ls~ 419 (795)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 886544
No 64
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.09 E-value=0.063 Score=60.64 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=56.4
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.+|-+.+ +.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.||. ++.. ..+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDI-DVQR-AANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTS-EEEE-CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCC-eEEe-cCCCcchhHHHHHH
Confidence 566654432 33434444444333222354 467899999999999999999999996 5533 45678999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98765544
No 65
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=93.97 E-value=0.047 Score=61.87 Aligned_cols=53 Identities=21% Similarity=0.173 Sum_probs=42.8
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHHhcCCc
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ls~~~ 421 (795)
.++.|.++||+++.|++.+.+.+.||. ++.. ....|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDA-PVDR-PVILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCC-eEEe-cCCCccHHHHHHHHHHHHcCCc
Confidence 467899999999999999999999996 5543 3467899999999998766544
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.86 E-value=0.061 Score=60.84 Aligned_cols=82 Identities=21% Similarity=0.207 Sum_probs=55.6
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEELC-EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.++-+.+ +.+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.||. ++.. ..+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGT-RVER-PEVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCC-ceEe-cCCCCcHHHHHHHH
Confidence 566654432 33433444444332222344 467899999999999999999999996 5543 34678999999999
Q ss_pred HHHhcCCc
Q 003782 414 AANLSDGI 421 (795)
Q Consensus 414 aa~ls~~~ 421 (795)
|+.-.+.+
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 98755544
No 67
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.22 E-value=0.16 Score=57.18 Aligned_cols=81 Identities=20% Similarity=0.143 Sum_probs=56.1
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHH
Q 003782 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (795)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~ 413 (795)
+|.++-+ +++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.||. ++.. ....|+.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~-~~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGV-DVVR-PKVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCC-eEEe-CCCCcchHHHHHHH
Confidence 5666544 3344444444444433233454 467899999999999999999999986 5543 34567999999999
Q ss_pred HHHhcCC
Q 003782 414 AANLSDG 420 (795)
Q Consensus 414 aa~ls~~ 420 (795)
|+.-.+.
T Consensus 448 A~~~~G~ 454 (504)
T 2d4w_A 448 AGIAVGF 454 (504)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9875543
No 68
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.14 E-value=0.11 Score=58.72 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=55.1
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCc-cEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHHH
Q 003782 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (795)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i-~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~ 412 (795)
+|.++-+ +++.+.-.+...++..-+..+. .+ +.|.++||+++.|.+.+.+.+.+|. ++.. ....|+.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~-pV~~-~~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINT-KIEV-SKYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCC-eEEe-cCCCcchHHHHHH
Confidence 5665544 3344444444444433222344 35 6799999999999999999999986 5543 3456799999999
Q ss_pred HHHHhcCC
Q 003782 413 LAANLSDG 420 (795)
Q Consensus 413 ~aa~ls~~ 420 (795)
.|+.-.+.
T Consensus 451 la~~~~G~ 458 (503)
T 2w40_A 451 LAGLEVKI 458 (503)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCc
Confidence 99875543
No 69
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=92.89 E-value=0.12 Score=58.11 Aligned_cols=78 Identities=17% Similarity=0.149 Sum_probs=51.8
Q ss_pred EeeHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHH
Q 003782 333 SITRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGAS 411 (795)
Q Consensus 333 ~itr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa 411 (795)
.-+|.+|-+. ++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.||. ++... . .|+.|+|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~~-~-~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGI-RVIAG-P-VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEEC-C-TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCC-eeecC-C-ccHhHHHHH
Confidence 4467666543 333444444444333222343 467899999999999999999999996 55433 2 589999996
Q ss_pred HHHHH
Q 003782 412 LLAAN 416 (795)
Q Consensus 412 ~~aa~ 416 (795)
+.|..
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 70
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.71 E-value=3.6 Score=44.20 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=28.3
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++...... .. +.++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~--~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK--RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT--CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC--CC-CcEEEEEeCCc-eEEEEE
Confidence 4776 5799999999988544321 11 56788888887 445555
No 71
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=92.37 E-value=0.47 Score=49.99 Aligned_cols=44 Identities=20% Similarity=0.145 Sum_probs=28.9
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~-~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDE-FTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTT-GGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCc-CCCCCcEEEEEECCc-EEEEEE
Confidence 4776 5799999999987533221 112467888888887 445554
No 72
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=91.27 E-value=1.8 Score=47.01 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=28.9
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++....... ...+.++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~-~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS-RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT-TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC-CCCCcEEEEEECCc-EEEEEE
Confidence 4776 57999999999885433211 12356788888887 445555
No 73
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=90.77 E-value=5.2 Score=45.66 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=44.5
Q ss_pred EEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHH
Q 003782 331 RSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQ 388 (795)
Q Consensus 331 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~ 388 (795)
.+.||..+++++... -.-+..-++-.|+.+|+..++|+.|+|.||++.-=-+.+.+.
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 469999999987543 123455667778899999999999999999988766666664
No 74
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=90.45 E-value=2 Score=48.33 Aligned_cols=53 Identities=15% Similarity=0.282 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCceeeecchhHHHHHHh-hhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 179 GLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 179 al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.+..+-+..|+++ .+|+..+=|.+.| +....+... ...+|+|+|||+|.++++
T Consensus 101 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~-~~~lviDIGGGStEl~~~ 154 (513)
T 1u6z_A 101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEK-GRKLVIDIGGGSTELVIG 154 (513)
T ss_dssp HHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCC-SCEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCC-CCEEEEEECCCcEEEEEE
Confidence 3444444569886 6777776666655 332222222 268999999999999987
No 75
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.02 E-value=6.6 Score=42.84 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=28.9
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGH-SQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-EEEEEE
Confidence 4777 4799999999988543321 112356788888877 445555
No 76
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=88.78 E-value=0.46 Score=49.88 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCceeeecchhHHHHHHh-hhcCCCCCCCcEEEEEEecCccceeeEEE
Q 003782 177 RKGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (795)
Q Consensus 177 R~al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsvv~ 234 (795)
...+..+-+..|+++ .+|+..+=|.+.| +....+.......+|+|+|||+|.+++++
T Consensus 92 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp HHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 344455555679987 5666555554444 33222222235689999999999999983
No 77
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.64 E-value=0.48 Score=52.93 Aligned_cols=72 Identities=11% Similarity=0.003 Sum_probs=51.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHH-hCCCccCCCCCcchhhHhhHHHHHHH
Q 003782 340 EELCEDLWER--SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEY-LGRTELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 340 e~l~~~~~~~--i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~-f~~~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
..+...+++. +.=.++++++...- .+.|.++||+++.|+..+.+.+. ||. ++..+ ...|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~-pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDC-AVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTS-EEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCC-eEEEc-CCCchHHHHHHHHhCc
Confidence 3455555553 44444555554331 26899999999999999999999 986 55433 4567899999999986
Q ss_pred h
Q 003782 417 L 417 (795)
Q Consensus 417 l 417 (795)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 3
No 78
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=87.92 E-value=6.2 Score=43.65 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHhCCce--eeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEEE
Q 003782 173 GQAERKGLMQAAELAGMNV--LSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYF 235 (795)
Q Consensus 173 ~~~qR~al~~Aa~~AGl~~--~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~~ 235 (795)
...-.+.+.+|.+.-|+++ +.++|+.+|++++..+.. +..++.+=+|-|+=-+.+.++
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-----~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-----PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-----CCcEEEEEEecCcceEEEeec
Confidence 4556778999998888864 789999999999876653 355666667888655555544
No 79
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=87.23 E-value=30 Score=35.92 Aligned_cols=48 Identities=17% Similarity=0.273 Sum_probs=30.7
Q ss_pred HHhCCceeeecchhHHHHHHhhhcC---------CCCCCCcEEEEEEecCccceeeEE
Q 003782 185 ELAGMNVLSLVNEHSGAALQYGIDK---------DFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 185 ~~AGl~~~~li~Ep~AAAl~y~~~~---------~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
+..|++.+.+.|+..|+|++-.... ......+.++++-+|-| +-.+++
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG-iG~giv 155 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG-LGVAHL 155 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS-EEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc-ceEEEE
Confidence 3458886789999999998754320 00123456888888887 344444
No 80
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=86.56 E-value=34 Score=35.77 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC--ccCCC---CCcchhhHhhHHHHHHHhc
Q 003782 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRH---LDADEAIVLGASLLAANLS 418 (795)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~---~n~deaVa~GAa~~aa~ls 418 (795)
+.+.+.+.+.++++..+ ++.|+|.||-+...++++.|.+.+... ++..+ +..|.+++.|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44555666666666554 468999999999999999999887321 33222 2468899999997654433
No 81
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=85.81 E-value=0.88 Score=48.30 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCceeeecchhHHHHHHh-hhcCCCCC--CCcEEEEEEecCccceeeEE
Q 003782 178 KGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSN--ESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 178 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~--~~~~vlV~D~GggT~dvsvv 233 (795)
..+..+-+..|+++ .+|+-.+=|.+.| +....+.. ....++++|+|||+|+++++
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~ 163 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIG 163 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEEC
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEe
Confidence 34445555579986 6777776666665 33333332 23569999999999999987
No 82
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=80.48 E-value=13 Score=37.28 Aligned_cols=16 Identities=19% Similarity=0.246 Sum_probs=15.4
Q ss_pred EEEEEcCccceEEEEE
Q 003782 26 VSSVDLGSEWLKVAVV 41 (795)
Q Consensus 26 vvGID~GTt~s~va~~ 41 (795)
.+.||.|+|+++.+++
T Consensus 5 ~L~IDIGNT~ik~gl~ 20 (249)
T 3bex_A 5 YLLVDVGNTHSVFSIT 20 (249)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 7999999999999999
No 83
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=80.30 E-value=42 Score=37.63 Aligned_cols=61 Identities=13% Similarity=0.070 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC--ccCCCC---CcchhhHhhHH
Q 003782 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHL---DADEAIVLGAS 411 (795)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~~---n~deaVa~GAa 411 (795)
+++.+...+..+++..+ ++.|+|+||-+....+++.|.+.+... ++..+. ..|.++..|.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHH
Confidence 44445555666666554 468999999999999999999876322 332221 23555555544
No 84
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.87 E-value=8.1 Score=42.51 Aligned_cols=54 Identities=11% Similarity=-0.006 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhCCc--eeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 175 AERKGLMQAAELAGMN--VLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 175 ~qR~al~~Aa~~AGl~--~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.-++.+.++.+.-|++ ++.++|+..|++++-.+.. .+.++.+=+|-|+=-.-+.
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-----~~~~iglilGTGvgg~~i~ 219 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-----AXIKMGIIFGSGVNAAYWC 219 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEE
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-----CccEEEEEECcEEEEEEEE
Confidence 4567788887666775 4799999999999876632 3566777788885444444
No 85
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=78.36 E-value=3.9 Score=45.82 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhCCceeeecchhHHHHHHh-hhcCCCCCCCcEEEEEEecCccceeeEEE
Q 003782 177 RKGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (795)
Q Consensus 177 R~al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsvv~ 234 (795)
...+..+-+..|+++ .+|+-.+=|.+.| +....++. ...+|+|+|||+|.+++++
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEee
Confidence 444555555679987 6777666665555 33222322 2359999999999999984
No 86
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=76.69 E-value=38 Score=33.88 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=29.3
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++.............++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4776 57999999999985443211122235777788876 666665
No 87
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=75.20 E-value=3.7 Score=43.58 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=29.4
Q ss_pred CCceeeecchhHHHHHHhh-----hcCCCC-CCCcEEEEEEecCccceeeEE
Q 003782 188 GMNVLSLVNEHSGAALQYG-----IDKDFS-NESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 188 Gl~~~~li~Ep~AAAl~y~-----~~~~~~-~~~~~vlV~D~GggT~dvsvv 233 (795)
|+. +++|+-.+=|.+.|. +.. +. ..+++++|+|+|||+|.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~-~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDT-LKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTC-SSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhh-ccccccccEEEEEeCCCceEEEEe
Confidence 544 477877666655542 321 11 233579999999999999987
No 88
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=73.51 E-value=8.4 Score=40.80 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=33.8
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCCCcc------CCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTEL------DRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i------~~~~n~deaVa~GAa~~aa~ 416 (795)
.++.|+++||+++.|++.++|++.++..++ ..+.+.-||++ -|++|..
T Consensus 283 ~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~~ 336 (371)
T 3qbx_A 283 DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAHR 336 (371)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHHH
T ss_pred CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHHH
Confidence 357899999999999999999999964322 33334444444 5666654
No 89
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=73.49 E-value=7.9 Score=45.54 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC--ccCCCC---CcchhhHhhHHHHHHHhc
Q 003782 348 ERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHL---DADEAIVLGASLLAANLS 418 (795)
Q Consensus 348 ~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~~---n~deaVa~GAa~~aa~ls 418 (795)
+-+.+.+.++.+..+ ++.|+|.||-...-.+++.|.+.+... ++..+. --|..+|+|+|++|+..-
T Consensus 691 ~~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 691 RAFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 334455555555443 567999999999999999999987543 232221 248999999998886543
No 90
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=71.01 E-value=52 Score=35.93 Aligned_cols=61 Identities=18% Similarity=0.204 Sum_probs=41.7
Q ss_pred cCCCCCHHHHHHHHHHHHHhCCce--eeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 168 VPPYFGQAERKGLMQAAELAGMNV--LSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 168 VPa~f~~~qR~al~~Aa~~AGl~~--~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
+|..-...-++.+.+|...-|+++ +.++|+.+|++++-++.. +..++.+=+|-|+=-..+.
T Consensus 166 ~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~yve 228 (451)
T 1bdg_A 166 ADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-----PKCAVGLIVGTGTNVAYIE 228 (451)
T ss_dssp CBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-----CCcEEEEEEeCCcceEEEE
Confidence 343334556788888887778864 589999999998866552 3566666688885444444
No 91
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.95 E-value=4.5 Score=34.21 Aligned_cols=17 Identities=29% Similarity=0.468 Sum_probs=16.0
Q ss_pred cEEEEEcCccceEEEEE
Q 003782 25 AVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (795)
.++|||||+..+.||+.
T Consensus 2 riLglD~G~kriGvAvs 18 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVG 18 (98)
T ss_dssp CEEEEEESSSEEEEEEE
T ss_pred cEEEEEeCCCEEEEEEE
Confidence 58999999999999998
No 92
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=70.92 E-value=9 Score=40.59 Aligned_cols=69 Identities=17% Similarity=0.158 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCC------ccCCCCCcchhhHhhHHHHHH
Q 003782 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~------~i~~~~n~deaVa~GAa~~aa 415 (795)
+..-+.+-+...|-+.++... ..+.|+++||+++.|.+.++|++.++.. .+..+.+.-||+|. |++|.
T Consensus 268 v~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA~ 341 (370)
T 3cqy_A 268 IQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHHH
Confidence 333344444455555554432 3568999999999999999999999653 23334455666665 55554
Q ss_pred H
Q 003782 416 N 416 (795)
Q Consensus 416 ~ 416 (795)
.
T Consensus 342 ~ 342 (370)
T 3cqy_A 342 R 342 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=69.43 E-value=18 Score=37.17 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=29.1
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++-..... ....++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~-~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGE-AXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEE
Confidence 4787 5799999999998544321 122356788888876 445554
No 94
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=67.99 E-value=19 Score=41.22 Aligned_cols=66 Identities=26% Similarity=0.287 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccC---CCCCcchhhHhhHHHHHHH
Q 003782 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELD---RHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~---~~~n~deaVa~GAa~~aa~ 416 (795)
+++.+.+.+.++.+.. .++.|+|+||-+...++++.|.+.+.+-++. ...--|-++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 4444555555555544 3568999999999999999999988322222 2334599999999998864
No 95
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=67.56 E-value=15 Score=43.05 Aligned_cols=67 Identities=22% Similarity=0.170 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC--CccC---CCCCcchhhHhhHHHHHHHhc
Q 003782 347 WERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR--TELD---RHLDADEAIVLGASLLAANLS 418 (795)
Q Consensus 347 ~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~--~~i~---~~~n~deaVa~GAa~~aa~ls 418 (795)
.+.+.+.+.++.+.. .++.|+|+||-+....+++.|.+.+.. -++. .....|-++|+|.|++|+...
T Consensus 678 a~~L~~~~~~a~~~~-----g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 678 VNFTYDLANLIRKET-----GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHH-----CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-----CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 333444444444443 346899999999999999999988732 1221 223358999999999987544
No 96
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=64.25 E-value=6.6 Score=43.18 Aligned_cols=56 Identities=9% Similarity=0.180 Sum_probs=35.0
Q ss_pred HHHHHHHHHH-h---CC--ceeeecchhHHHHHHh-----hhcCCCC----------CCCcEEEEEEecCccceeeEE
Q 003782 177 RKGLMQAAEL-A---GM--NVLSLVNEHSGAALQY-----GIDKDFS----------NESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 177 R~al~~Aa~~-A---Gl--~~~~li~Ep~AAAl~y-----~~~~~~~----------~~~~~vlV~D~GggT~dvsvv 233 (795)
++.+.++++. . || ..+++|+-.+=|.++| .+.. +. .....++|+|+|||+|.++..
T Consensus 131 ~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~-~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~ 207 (456)
T 3cj1_A 131 TARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLEN-FIKYGWVGRWIRPRKGTLGAMDLGGASTQITFE 207 (456)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTT-TSCCEETTEECSSCCCCCEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcc-cccccccccccccCCCceEEEEcCCCceEEEec
Confidence 4445554443 3 44 3568888776665555 3321 10 113568999999999999987
No 97
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=60.96 E-value=1.9 Score=47.54 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHhC---CceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 173 GQAERKGLMQAAELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 173 ~~~qR~al~~Aa~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
...-.+.+++|.+.-| ++++.++|+.+|..++.++.. +...+-+=+|-||= .+.+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-----~~~~iGlI~GTGtN-a~Y~ 240 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-----HQCEVGMIVGTGCN-ACYM 240 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEE-EEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-----CCceEEEEEecCCc-eEEe
Confidence 3444666667777766 467899999999887765543 24444444788865 4444
No 98
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=60.30 E-value=67 Score=33.96 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=29.5
Q ss_pred hCCceeeecchhHHHHHHhhhcCC------------CCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKD------------FSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~------------~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|+|++-..... .....++++++-+|.| +-.+++
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~giv 164 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVV 164 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEE
Confidence 4887 5799999999998543220 1223467888888865 445555
No 99
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=60.02 E-value=2.8 Score=45.71 Aligned_cols=55 Identities=24% Similarity=0.308 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHhC---CceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeE
Q 003782 173 GQAERKGLMQAAELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAAL 232 (795)
Q Consensus 173 ~~~qR~al~~Aa~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv 232 (795)
...-.+.+++|.+.-| ++++.++|+.+|+.++.++.. +...+-+=+|-||=-+.+
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-----~~~~iglIlGTGtNa~y~ 216 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-----PRCEIGLIVGTGTNACYM 216 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-----CCceEEEEEeCCceEEEE
Confidence 3444556677776543 467899999999988865543 245555557777544333
No 100
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=59.29 E-value=58 Score=29.71 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=71.4
Q ss_pred CCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCC
Q 003782 645 ASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGE 724 (795)
Q Consensus 645 ~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~ 724 (795)
.|...+++-+.-..+++-...|...|++. -.+...+.+.+-+.+..+.++-+.+...++++..-|.+- .
T Consensus 20 ~p~~~~elik~L~~le~sassDa~vrq~I----------a~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eY-n 88 (152)
T 4fla_A 20 GPLLTEELIKALQDLENAASGDATVRQKI----------ASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEY-N 88 (152)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHH----------HTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHhhccccchHHHHHHH----------HcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHH-H
Confidence 35566777777788888888898888663 333444554443555566666788888888888777653 1
Q ss_pred CCCHHHHHHHHHHHHHhhhHHHH---HHHhhhcchHHHHHHHHHHHHHHHHHhcccCCCC
Q 003782 725 DATAKEFQERLDVLKAIGDPVFF---RFKELTARPASVEHAQKYLGQLQQIVNDWETNKP 781 (795)
Q Consensus 725 ~a~~~~~~~k~~~L~~~~~~i~~---r~~e~~~rp~a~~~~~~~~~~~~~~~~~~~~~~~ 781 (795)
..-..+++++.+-++.+.+-+.. .+.+.+.+-++.......+..+++.+++.-++.|
T Consensus 89 ~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~sLP 148 (152)
T 4fla_A 89 GRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQSLP 148 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 23333445554444444444433 3333344444444455555555555554444433
No 101
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=58.75 E-value=35 Score=34.53 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=32.4
Q ss_pred CccEEEEecCccCCHHHHHHHHHHhCC-----------CccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVPKLQAKLQEYLGR-----------TELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~-----------~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.+.|+|.||.+..|.+.+.+++.+.. .++....-.+.+.++||+..+..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 345789989888777666666654321 12332334567899999988765
No 102
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=58.51 E-value=31 Score=38.82 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=53.9
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCCCccC-CCCCcchhhHhhHHHH
Q 003782 336 RQKFEELCED-LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELD-RHLDADEAIVLGASLL 413 (795)
Q Consensus 336 r~efe~l~~~-~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~-~~~n~deaVa~GAa~~ 413 (795)
+.++-..++. +.+-+...+..+.+.. .++.|.|.||.+....+++.|.+..+...+. .+...|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 4555555544 3344455555555544 3568999999999999999998765432222 2345699999999999
Q ss_pred HHHhcC
Q 003782 414 AANLSD 419 (795)
Q Consensus 414 aa~ls~ 419 (795)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 877644
No 103
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=51.80 E-value=7.3 Score=35.73 Aligned_cols=18 Identities=33% Similarity=0.455 Sum_probs=16.8
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
|.++|||+|+..+.+|+.
T Consensus 3 mriLGiDpG~~riGvAv~ 20 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALS 20 (150)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred CEEEEEEccCCEEEEEEE
Confidence 569999999999999998
No 104
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=49.72 E-value=15 Score=40.07 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=27.6
Q ss_pred eeeecchhHHHHHHh-----hhcCCCCC-CCcEEEEEEecCccceeeEE
Q 003782 191 VLSLVNEHSGAALQY-----GIDKDFSN-ESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 191 ~~~li~Ep~AAAl~y-----~~~~~~~~-~~~~vlV~D~GggT~dvsvv 233 (795)
.+++|+..+=+.++| .+.. +.. ...++.++|+|||++.++..
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~-l~~~~~~t~g~lDlGGgStQi~f~ 198 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR-FKTPGGSTFGALDLGGASTQITFV 198 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT-TC---CCCCEEEEECSSEEEEEEC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc-ccCCCCCceEEEecCCCceEEEec
Confidence 468888766655544 3332 111 23568899999999999876
No 105
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=48.46 E-value=11 Score=41.99 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=17.8
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
+..++|||+|||++++++++
T Consensus 3 m~~~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYD 22 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEEc
Confidence 45799999999999999994
No 106
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=48.26 E-value=12 Score=33.71 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=16.2
Q ss_pred cEEEEEcCccceEEEEE
Q 003782 25 AVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (795)
.++|||||+..+.||+.
T Consensus 4 ~iLglD~G~kriGvAvs 20 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVG 20 (138)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEE
Confidence 58999999999999998
No 107
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=46.59 E-value=9.2 Score=42.47 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.1
Q ss_pred CCCcEEEEEcCccceEEEEEE
Q 003782 22 SQSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 22 ~~~~vvGID~GTt~s~va~~~ 42 (795)
.+..++|||+|||++++++++
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEE
Confidence 345699999999999999984
No 108
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=46.18 E-value=19 Score=33.57 Aligned_cols=19 Identities=32% Similarity=0.435 Sum_probs=17.0
Q ss_pred CcEEEEEcCccceEEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (795)
|-++|||-|++++..+++.
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 4689999999999999983
No 109
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=46.11 E-value=1e+02 Score=37.02 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHh-CC--ceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 173 GQAERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 173 ~~~qR~al~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
...-.+.+++|...- |+ +++.++|+.+|++++-++.. +..++.+=+|-|+=-..+.
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~y~e 688 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-----PTCEVGLIVGTGSNACYME 688 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-----CCcEEEEEEeCCeeEEEEE
Confidence 445577788887643 55 58999999999988866553 3456666678875444443
No 110
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=45.57 E-value=15 Score=33.98 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.9
Q ss_pred CcEEEEEcCccceEEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (795)
|.++|||-|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 4689999999999999983
No 111
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=45.02 E-value=12 Score=38.42 Aligned_cols=24 Identities=21% Similarity=0.340 Sum_probs=16.4
Q ss_pred hhcCCCCcEEEEEcCccceEEEEE
Q 003782 18 LVSHSQSAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 18 ~~~~~~~~vvGID~GTt~s~va~~ 41 (795)
+++......+|||+|+|.+++++.
T Consensus 14 ~~~~~~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 14 LVPRGSHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp -------CEEEEEECSSEEEEEEE
T ss_pred cccCCCCeEEEEEEChhhEEEEEE
Confidence 344556679999999999999998
No 112
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=43.80 E-value=38 Score=34.21 Aligned_cols=48 Identities=27% Similarity=0.240 Sum_probs=33.1
Q ss_pred ccEEEEecCccCCHHHHHHHHHHhCCC------ccCCCCCcchhhHhhHHHHHH
Q 003782 368 IYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLAA 415 (795)
Q Consensus 368 i~~V~LvGG~sriP~v~~~l~~~f~~~------~i~~~~n~deaVa~GAa~~aa 415 (795)
.+.|+|.||.+..|.+.+.+++.+... ++....-.+.+.++|||..+.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 457888888887788888888776542 222233456789999998753
No 113
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=43.30 E-value=26 Score=36.01 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
.+...+.+...++++|+++++++++|++|+..|++.++ -+.+.+.||.
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 260 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGM 260 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 34455677888999999999999999999999998765 4578888875
No 114
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=43.29 E-value=14 Score=41.60 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=18.2
Q ss_pred CCCCcEEEEEcCccceEEEEEE
Q 003782 21 HSQSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 21 ~~~~~vvGID~GTt~s~va~~~ 42 (795)
..+..++|||+|||.+++++++
T Consensus 7 ~~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 7 APRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp --CCEEEEEEECSSEEEEEEEE
T ss_pred CCCCEEEEEEEcCcCEEEEEEC
Confidence 3456899999999999999994
No 115
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=42.21 E-value=13 Score=41.64 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.7
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
..++|||+|||+++++++
T Consensus 26 ~~~lgIDiGtts~k~~l~ 43 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVF 43 (520)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEeCCcceEEEEE
Confidence 369999999999999999
No 116
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=42.15 E-value=15 Score=41.60 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=17.8
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEEC
Confidence 45799999999999999994
No 117
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=41.65 E-value=18 Score=37.71 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=24.2
Q ss_pred eecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEEE
Q 003782 193 SLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVY 234 (795)
Q Consensus 193 ~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv~ 234 (795)
..-.-|.|.|...+... . ...+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~--~---~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNI--E---ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHT--C---SSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhc--C---CCEEEEEcCcchhhhhhhc
Confidence 34445666666322221 1 2379999999999998885
No 118
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=40.22 E-value=18 Score=40.31 Aligned_cols=20 Identities=20% Similarity=0.391 Sum_probs=17.7
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
+..++|||+|||++++++++
T Consensus 4 m~~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALAD 23 (511)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEEC
Confidence 45799999999999999993
No 119
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=40.04 E-value=16 Score=40.69 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.8
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
..++|||+|||+++++++
T Consensus 3 ~~~lgIDiGtts~k~~l~ 20 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVM 20 (510)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEcCCcceEEEEE
Confidence 468999999999999999
No 120
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=39.77 E-value=16 Score=40.54 Aligned_cols=19 Identities=32% Similarity=0.435 Sum_probs=16.0
Q ss_pred CcEEEEEcCccceEEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (795)
..++|||+|||++++++++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp --CEEEEECSSEEEEEEEC
T ss_pred ceEEEEEcCCCCeEEEEEE
Confidence 4699999999999999993
No 121
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=38.98 E-value=16 Score=40.92 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.5
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
..++|||+|||+++++++
T Consensus 4 kYvlgID~GTss~Ka~l~ 21 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVM 21 (526)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred eEEEEEEccccceeeeEE
Confidence 368999999999999998
No 122
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=38.55 E-value=14 Score=41.82 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.3
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
+..+||||+|||++++++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d 23 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLID 23 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEecCCcceEEEEEE
Confidence 45799999999999999994
No 123
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=37.32 E-value=21 Score=39.80 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=17.8
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEcCCCceEEEEEC
Confidence 45799999999999999994
No 124
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=37.26 E-value=17 Score=40.58 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=17.3
Q ss_pred CCcEEEEEcCccceEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~ 41 (795)
...++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVT 22 (515)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEE
Confidence 4579999999999999999
No 125
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=37.11 E-value=16 Score=40.66 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 003782 25 AVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (795)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtT~~k~~l~ 19 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILF 19 (495)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred EEEEEeeCCcceEEEEE
Confidence 58999999999999999
No 126
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=36.74 E-value=16 Score=40.71 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=17.3
Q ss_pred CcEEEEEcCccceEEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (795)
..++|||+|||++++++++
T Consensus 7 ~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEecCcceEEEEEC
Confidence 5799999999999999994
No 127
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=36.61 E-value=19 Score=40.06 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=16.9
Q ss_pred CcEEEEEcCccceEEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (795)
..++|||+|||++++++++
T Consensus 4 ~~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEEC
Confidence 3589999999999999993
No 128
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=36.51 E-value=57 Score=25.56 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=36.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCC
Q 003782 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVST 701 (795)
Q Consensus 653 ~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~ 701 (795)
....++.+++...|...++++......|+-|=.+|..|+. |+.+++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK---frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK---YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhccCC
Confidence 3445667888899999999999999999999999998864 666553
No 129
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=36.20 E-value=21 Score=39.70 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=16.7
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~ 23 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILF 23 (501)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCccceEEEEE
Confidence 369999999999999999
No 130
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=35.71 E-value=36 Score=34.74 Aligned_cols=46 Identities=26% Similarity=0.174 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
.....+...++++|+++++++++|++|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345567788999999999999999999999998765 3567788875
No 131
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=34.91 E-value=64 Score=34.61 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=48.5
Q ss_pred cEEEEeCCCcc-ccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEecCCCCCHHHHHHHHHHHHHhCCceeeecchhHH-HH
Q 003782 125 AVSFKIDENNN-FSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AA 202 (795)
Q Consensus 125 ~~~~~~~~~~~-~~~eel~a~~L~~l~~~a~~~~~~~~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~Ep~A-AA 202 (795)
.+++-+++|+- +...-++..+-.++ .| +.++|++.|+.-+ -.++-||.++|.+.+--+--..| ||
T Consensus 126 rvGlYVPGG~a~ypSsvLM~aiPAkV-------AG--V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAA 192 (434)
T 1kae_A 126 SVGLYIPGGSAPLFSTVLMLATPASI-------AG--CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAA 192 (434)
T ss_dssp EEEEECCCSSSCCTHHHHHHHHHHHH-------HT--CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred eEEEEecCCCCCchhHHHHhhccHhh-------cC--CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHH
Confidence 35555677753 33333333332222 13 5689999998333 35889999999999999999888 89
Q ss_pred HHhhhcC
Q 003782 203 LQYGIDK 209 (795)
Q Consensus 203 l~y~~~~ 209 (795)
++||...
T Consensus 193 lAyGTet 199 (434)
T 1kae_A 193 LAFGTES 199 (434)
T ss_dssp HHHCCSS
T ss_pred HHcCCCC
Confidence 9999753
No 132
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=34.87 E-value=34 Score=35.22 Aligned_cols=47 Identities=17% Similarity=0.093 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 344 EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 344 ~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
+-....+...++++|+++++++++|++|+..|++.++ -+.+.+.||.
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 3445677788999999999999999999999988764 4567788875
No 133
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=34.75 E-value=50 Score=34.32 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
-....+...++++|+++++++++|++|+..|++.++ -+.+.+.||.
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 345667788999999999999999999999988764 3567777764
No 134
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=34.57 E-value=42 Score=35.94 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=37.6
Q ss_pred CCcEEEecCCCCCHHHHHHHHHHHHHhCCceeeecchhHH-HHHHhhhcC
Q 003782 161 VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AALQYGIDK 209 (795)
Q Consensus 161 ~~~~VItVPa~f~~~qR~al~~Aa~~AGl~~~~li~Ep~A-AAl~y~~~~ 209 (795)
+.++|++.|+. ...---.++-||+++|.+.+--+--..| ||++||...
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet 208 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTET 208 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSS
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCc
Confidence 56799999983 2112346889999999999888988888 799999764
No 135
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=34.07 E-value=29 Score=35.51 Aligned_cols=64 Identities=17% Similarity=0.112 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccC--CHHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHH
Q 003782 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR--VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sr--iP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+++.+- .|+.+.+.||+++|..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~--------~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV--------APQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC--------CCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc--------CCCCCHHHHHHHHHhh
Confidence 444555555555555544322 2 5667898888864 5677777776531 1457789999988753
No 136
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=33.86 E-value=20 Score=39.79 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=16.5
Q ss_pred CcEEEEEcCccceEEEEE
Q 003782 24 SAVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (795)
..++|||+|||+++++++
T Consensus 3 ~~~lgiDiGtt~~k~~l~ 20 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIF 20 (497)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEecCCchhEEEEE
Confidence 358999999999999999
No 137
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=33.02 E-value=91 Score=33.02 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=34.0
Q ss_pred CccEEEEecCccCCHH-HHHHHHHHhCCC---ccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVPK-LQAKLQEYLGRT---ELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP~-v~~~l~~~f~~~---~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+++.|+|.||.+..+. +.+.+++.+... .+......+.+.++||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5678999999987644 778888777542 2222323345899999987643
No 138
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=32.83 E-value=1.1e+02 Score=31.40 Aligned_cols=50 Identities=32% Similarity=0.282 Sum_probs=33.0
Q ss_pred CccEEEEecCccCC-----HHHHHHHHHHhCC------CccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRV-----PKLQAKLQEYLGR------TELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sri-----P~v~~~l~~~f~~------~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.+.|+|-||.++. +.+++.+++.+.. .++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 55688888888775 4577777766531 12222333578999999988753
No 139
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=32.00 E-value=54 Score=33.46 Aligned_cols=47 Identities=17% Similarity=0.042 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 344 EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 344 ~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
+.....+...++++|+++++++++|++|++.+++.++ -+.+.+.||.
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 254 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 3445677788999999999999999999999998754 3556777764
No 140
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=31.72 E-value=32 Score=35.01 Aligned_cols=68 Identities=12% Similarity=-0.067 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCC--HHHHHHHHHHhCCCccCCCCCcchhhHhhHHHHHHH
Q 003782 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV--PKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sri--P~v~~~l~~~f~~~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
.+..++++....+-..+ ...+ ..+.+.|+|.||-++. +.+++.+++... ++ ..+..+...||+.+|..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHh
Confidence 34445555555555555 2221 1155679999998876 667777666431 22 23568899999999864
No 141
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=30.37 E-value=31 Score=38.10 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=15.3
Q ss_pred EEEEEcCccceEEEEE
Q 003782 26 VSSVDLGSEWLKVAVV 41 (795)
Q Consensus 26 vvGID~GTt~s~va~~ 41 (795)
++|||+|||+++++++
T Consensus 2 ~lgiDiGtt~~k~~l~ 17 (484)
T 2itm_A 2 YIGIDLGTSGVKVILL 17 (484)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEecCcccEEEEE
Confidence 6999999999999998
No 142
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=30.21 E-value=86 Score=32.97 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=17.9
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 003782 23 QSAVSSVDLGSEWLKVAVVN 42 (795)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (795)
++.++|||+|.|++.+++++
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d 47 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVR 47 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEe
Confidence 56799999999999999984
No 143
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=30.04 E-value=30 Score=28.25 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=25.7
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhCCce
Q 003782 164 FVISVPPYFGQAERKGLMQAAELAGMNV 191 (795)
Q Consensus 164 ~VItVPa~f~~~qR~al~~Aa~~AGl~~ 191 (795)
-.++.|+.++..||..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4799999999999999999999999864
No 144
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=29.93 E-value=62 Score=33.41 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
-....+...++++|+++++++++|++|++.+++.++ -+.+.+.||.
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 266 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDL 266 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 345667788999999999999999999999998765 3557777764
No 145
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=28.39 E-value=28 Score=38.66 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 003782 25 AVSSVDLGSEWLKVAVV 41 (795)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (795)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtts~k~~l~ 19 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVF 19 (504)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCcceEEEEE
Confidence 58999999999999999
No 146
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=26.60 E-value=37 Score=34.26 Aligned_cols=71 Identities=18% Similarity=0.216 Sum_probs=37.4
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCccEEEEecCccCCHHHHHHHHHHhCCCccCCCCCcchhhHhhHH
Q 003782 334 ITRQKFEELCEDLWERSLVPLREVLNYSGLK--MDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGAS 411 (795)
Q Consensus 334 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~--~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deaVa~GAa 411 (795)
+-++.-+.+-.-++......|+..+++..-. ...--.|+++||.+++- ... +.....+|+ -+-.|..
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~l------~~~----~~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASLF------DKQ----GLYDHLVPD-LVLQGIR 250 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGGG------TTT----TCCSEECTT-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHHh------ccC----CCCCEECcC-hHHHHHH
Confidence 4456666666666666655555555433211 01123699999987541 111 111123444 6778877
Q ss_pred HHHH
Q 003782 412 LLAA 415 (795)
Q Consensus 412 ~~aa 415 (795)
+...
T Consensus 251 ~i~~ 254 (266)
T 3djc_A 251 LAAM 254 (266)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 147
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=24.52 E-value=1.2e+02 Score=30.82 Aligned_cols=50 Identities=14% Similarity=0.115 Sum_probs=31.8
Q ss_pred CccEEEEecCccCCH----HHHHHHHHHhCC------------CccCCCCCcchhhHhhHHHHHHH
Q 003782 367 EIYAVELIGGGTRVP----KLQAKLQEYLGR------------TELDRHLDADEAIVLGASLLAAN 416 (795)
Q Consensus 367 ~i~~V~LvGG~sriP----~v~~~l~~~f~~------------~~i~~~~n~deaVa~GAa~~aa~ 416 (795)
+.+.|+|-||.++.+ .+++.+.+.... ..+....-.+.|.++|||.++..
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 456788888888764 555666655421 01333334577999999988753
No 148
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=23.92 E-value=1.1e+02 Score=31.69 Aligned_cols=48 Identities=15% Similarity=-0.021 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
++...+.+...++++|+++++++++|+++++..++.+ +-+.+.+.++-
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl 276 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGL 276 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCC
Confidence 3455667778899999999999999999999988865 44677777764
No 149
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=23.44 E-value=77 Score=33.69 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
...+.+...++++|+++++++++|+++++.+++.++ -+.+.+.+|-
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl 329 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGI 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCC
Confidence 445667788899999999999999999999988664 4567777764
No 150
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=23.04 E-value=84 Score=32.33 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
.....+...++++|+++++++++|+.+++.++++++ -+.+.+.||-
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 345677788999999999999999999999998765 3446667764
No 151
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=21.96 E-value=43 Score=34.18 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=33.3
Q ss_pred CcEEEecCCCCCHHHHHHHHHHHHHh--CCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCcc
Q 003782 162 KDFVISVPPYFGQAERKGLMQAAELA--GMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATT 227 (795)
Q Consensus 162 ~~~VItVPa~f~~~qR~al~~Aa~~A--Gl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT 227 (795)
..+.|++|..-+......+.. .. ++ .+.+.|+..||+++-. . ....+++=+|-|.
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~-pv~v~NDa~aaa~ge~--~-----~~~~v~v~~GTGi 133 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFA-RLSLATDGYTTLLGAH--G-----GQPGIIVALGTGS 133 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCS-EEEEECHHHHHHHHHT--T-----TSSEEEEEESSSE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCc-eEEEECCHHHHHHhhc--C-----CCCeEEEEecCCe
Confidence 457889998876544332221 12 33 4689999999887631 1 1235556677776
No 152
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=21.73 E-value=2.3e+02 Score=22.91 Aligned_cols=42 Identities=12% Similarity=0.132 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH
Q 003782 725 DATAKEFQERLDVLKAIGDPVFFRFKELTARPASVEHAQKYLGQL 769 (795)
Q Consensus 725 ~a~~~~~~~k~~~L~~~~~~i~~r~~e~~~rp~a~~~~~~~~~~~ 769 (795)
..+.+++..+.++|++....|.. |...|..-+..++..|.++
T Consensus 17 K~S~eeL~kQk~eL~~~l~~l~~---e~~~R~~~i~el~akidd~ 58 (101)
T 1d7m_A 17 KVSREQLIKQKDQLNSLLASLES---EGAEREKRLRELEAKLDET 58 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 34455555555666655555543 3444444444555444443
No 153
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.16 E-value=2.9e+02 Score=29.98 Aligned_cols=23 Identities=13% Similarity=0.169 Sum_probs=19.8
Q ss_pred CCcEEEEEEecCccceeeEEEEe
Q 003782 214 ESRHVVFYDMGATTTYAALVYFS 236 (795)
Q Consensus 214 ~~~~vlV~D~GggT~dvsvv~~~ 236 (795)
+...++.+|+||.++-+.++...
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEE
T ss_pred ccceEEEEEeCCCeEEEEEEEeC
Confidence 45778999999999999999764
No 154
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=21.11 E-value=2.1e+02 Score=31.31 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=20.3
Q ss_pred CCcEEEEEEecCccceeeEEEEe
Q 003782 214 ESRHVVFYDMGATTTYAALVYFS 236 (795)
Q Consensus 214 ~~~~vlV~D~GggT~dvsvv~~~ 236 (795)
+...+|.+|+||.++-++++++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~ 100 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLG 100 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEEC
Confidence 34689999999999999999875
No 155
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=20.91 E-value=1.2e+02 Score=31.56 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCCHHHHHHHHHHhCC
Q 003782 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (795)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (795)
+.+..+..+...++++|++++++.++|+++++..++.+ +.+.+.+.+|-
T Consensus 240 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~lgl 288 (345)
T 3s21_A 240 LLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSFGI 288 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHcCc
Confidence 44455567778889999999999999999999988866 45667777764
No 156
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=20.65 E-value=2.5e+02 Score=28.83 Aligned_cols=44 Identities=14% Similarity=-0.010 Sum_probs=28.8
Q ss_pred hCCceeeecchhHHHHHHhhhcCCCCCCCcEEEEEEecCccceeeEE
Q 003782 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (795)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsvv 233 (795)
.|++ +.+.|+..|||++....... ...+.++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~-~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG-KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT-TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC-CCCCcEEEEEECCC-EEEEEE
Confidence 4776 57999999999885433211 12356788888887 445555
No 157
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=20.10 E-value=1.4e+02 Score=21.88 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhhhhhH
Q 003782 647 LSKEALVDAEAKLEELDKK-DADRRRTAELKNNLEGY 682 (795)
Q Consensus 647 ls~~~~~~~~~~~~~~~~~-D~~~~~~~~akN~LEs~ 682 (795)
-+..+++.++.+..++..+ +....+..+.+..|+.|
T Consensus 16 p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~~ 52 (53)
T 2yy0_A 16 PENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQY 52 (53)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3678899998888777655 44455555666666543
No 158
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=20.09 E-value=3.2e+02 Score=23.85 Aligned_cols=65 Identities=14% Similarity=0.249 Sum_probs=42.8
Q ss_pred hhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHh
Q 003782 678 NLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKE 751 (795)
Q Consensus 678 ~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~Wl~~~g~~a~~~~~~~k~~~L~~~~~~i~~r~~e 751 (795)
.++.++-.|...|-+.+.+ -+-++++.+..-.||.+|....+.+++. |+..=..++..|...+..
T Consensus 13 ~~~~~~~~mMqqL~SKevL--------YepmKel~~kyP~WLe~nk~~l~~Ed~~-RY~kQ~~lv~~I~~~fE~ 77 (126)
T 2wl8_A 13 NILPIMQSIMQNLLSKDVL--------YPSLKEITEKYPEWLQSHRESLPPEQFE-KYQEQHSVMCKICEQFEA 77 (126)
T ss_dssp -CHHHHHHHHHHHTSHHHH--------HHHHHHHHTTHHHHHHHHGGGSCHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhHHhh--------hccHHHHHHHhhHHHHhCcccCCHHHHH-HHHHHHHHHHHHHHHHcC
Confidence 4666666666666543211 2457888888999999998777887765 555555666666666554
Done!